2024-12-06 22:25:35,510 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 22:25:35,827 Running on GPU
2024-12-06 22:25:39,515 Found 6 citations for tools or databases
2024-12-06 22:25:39,516 Query 1/1: KLHL36_CXorf56 (length 838)
2024-12-06 22:25:39,800 Sleeping for 9s. Reason: PENDING
2024-12-06 22:25:49,056 Sleeping for 9s. Reason: RUNNING
2024-12-06 22:25:58,323 Sleeping for 7s. Reason: RUNNING
2024-12-06 22:26:05,584 Sleeping for 8s. Reason: RUNNING
2024-12-06 22:26:13,843 Sleeping for 5s. Reason: RUNNING
2024-12-06 22:26:19,102 Sleeping for 9s. Reason: RUNNING
2024-12-06 22:26:28,359 Sleeping for 6s. Reason: RUNNING
2024-12-06 22:26:34,627 Sleeping for 6s. Reason: RUNNING
2024-12-06 22:26:40,884 Sleeping for 7s. Reason: RUNNING
2024-12-06 22:26:48,141 Sleeping for 6s. Reason: RUNNING
2024-12-06 22:26:54,400 Sleeping for 7s. Reason: RUNNING
2024-12-06 22:27:01,662 Sleeping for 9s. Reason: RUNNING
2024-12-06 22:27:10,934 Sleeping for 6s. Reason: RUNNING
2024-12-06 22:27:17,198 Sleeping for 8s. Reason: RUNNING
2024-12-06 22:27:25,464 Sleeping for 9s. Reason: RUNNING
2024-12-06 22:27:36,302 Sleeping for 6s. Reason: PENDING
2024-12-06 22:27:42,554 Sleeping for 6s. Reason: RUNNING
2024-12-06 22:27:48,809 Sleeping for 10s. Reason: RUNNING
2024-12-06 22:27:59,077 Sleeping for 6s. Reason: RUNNING
2024-12-06 22:28:05,334 Sleeping for 9s. Reason: RUNNING
2024-12-06 22:28:14,604 Sleeping for 5s. Reason: RUNNING
2024-12-06 22:28:19,865 Sleeping for 8s. Reason: RUNNING
2024-12-06 22:28:28,122 Sleeping for 6s. Reason: RUNNING
2024-12-06 22:28:34,382 Sleeping for 10s. Reason: RUNNING
2024-12-06 22:28:44,643 Sleeping for 6s. Reason: RUNNING
2024-12-06 22:28:50,895 Sleeping for 8s. Reason: RUNNING
2024-12-06 22:28:59,164 Sleeping for 6s. Reason: RUNNING
2024-12-06 22:29:05,420 Sleeping for 10s. Reason: RUNNING
2024-12-06 22:29:17,999 Setting max_seq=508, max_extra_seq=2048
2024-12-06 22:31:58,793 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=75.6 pTM=0.66 ipTM=0.195
2024-12-06 22:32:13,329 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=76.8 pTM=0.675 ipTM=0.227 tol=9.2
2024-12-06 22:32:27,906 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=77.6 pTM=0.668 ipTM=0.162 tol=4.89
2024-12-06 22:32:42,467 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=77 pTM=0.662 ipTM=0.18 tol=4.82
2024-12-06 22:32:57,082 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=77.5 pTM=0.663 ipTM=0.157 tol=5.15
2024-12-06 22:33:11,698 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=77.4 pTM=0.66 ipTM=0.138 tol=14.3
2024-12-06 22:33:26,340 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=76.8 pTM=0.663 ipTM=0.141 tol=5.46
2024-12-06 22:33:41,000 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=77.5 pTM=0.659 ipTM=0.141 tol=16.8
2024-12-06 22:33:55,669 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=78.1 pTM=0.662 ipTM=0.142 tol=4.02
2024-12-06 22:34:10,327 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=77.3 pTM=0.659 ipTM=0.138 tol=4.64
2024-12-06 22:34:24,988 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=77.9 pTM=0.658 ipTM=0.154 tol=5.53
2024-12-06 22:34:39,653 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=77.6 pTM=0.66 ipTM=0.167 tol=12.8
2024-12-06 22:34:54,305 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=77.7 pTM=0.664 ipTM=0.214 tol=10.2
2024-12-06 22:35:08,940 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=78.4 pTM=0.685 ipTM=0.294 tol=10.7
2024-12-06 22:35:23,609 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=80.4 pTM=0.728 ipTM=0.483 tol=3.15
2024-12-06 22:35:38,290 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=81.4 pTM=0.75 ipTM=0.606 tol=2.06
2024-12-06 22:35:52,941 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=81.7 pTM=0.758 ipTM=0.656 tol=1.52
2024-12-06 22:36:07,596 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=81.8 pTM=0.758 ipTM=0.664 tol=1.56
2024-12-06 22:36:22,265 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=81.8 pTM=0.761 ipTM=0.67 tol=1.73
2024-12-06 22:36:36,913 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=81.6 pTM=0.757 ipTM=0.674 tol=0.775
2024-12-06 22:36:51,597 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=81.8 pTM=0.759 ipTM=0.681 tol=0.545
2024-12-06 22:37:06,260 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=81.8 pTM=0.761 ipTM=0.682 tol=0.726
2024-12-06 22:37:20,940 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=81.8 pTM=0.76 ipTM=0.677 tol=0.556
2024-12-06 22:37:35,630 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=81.9 pTM=0.763 ipTM=0.685 tol=0.475
2024-12-06 22:37:35,631 alphafold2_multimer_v3_model_1_seed_000 took 492.6s (23 recycles)
2024-12-06 22:37:50,746 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=74.8 pTM=0.684 ipTM=0.307
2024-12-06 22:38:05,496 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=79.7 pTM=0.722 ipTM=0.477 tol=12.4
2024-12-06 22:38:20,245 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=80.6 pTM=0.741 ipTM=0.545 tol=9.34
2024-12-06 22:38:34,959 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=82.3 pTM=0.769 ipTM=0.646 tol=7.79
2024-12-06 22:38:49,687 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=82.4 pTM=0.77 ipTM=0.663 tol=0.968
2024-12-06 22:39:04,396 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=82.4 pTM=0.77 ipTM=0.68 tol=0.464
2024-12-06 22:39:04,397 alphafold2_multimer_v3_model_2_seed_000 took 88.3s (5 recycles)
2024-12-06 22:39:19,614 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=78.1 pTM=0.667 ipTM=0.145
2024-12-06 22:39:34,426 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=78.4 pTM=0.676 ipTM=0.169 tol=9.82
2024-12-06 22:39:49,188 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=78.1 pTM=0.688 ipTM=0.26 tol=11.1
2024-12-06 22:40:04,008 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=79.3 pTM=0.686 ipTM=0.44 tol=19.3
2024-12-06 22:40:18,769 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=79.1 pTM=0.695 ipTM=0.317 tol=11.6
2024-12-06 22:40:33,503 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=79.7 pTM=0.718 ipTM=0.388 tol=3.63
2024-12-06 22:40:48,251 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=80.1 pTM=0.731 ipTM=0.494 tol=0.762
2024-12-06 22:41:02,965 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=81.1 pTM=0.754 ipTM=0.631 tol=6.2
2024-12-06 22:41:17,718 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=82.2 pTM=0.771 ipTM=0.678 tol=2.45
2024-12-06 22:41:32,473 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=82.2 pTM=0.769 ipTM=0.7 tol=1.21
2024-12-06 22:41:47,226 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=82.1 pTM=0.768 ipTM=0.707 tol=0.875
2024-12-06 22:42:01,970 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=81.9 pTM=0.765 ipTM=0.709 tol=1.55
2024-12-06 22:42:16,708 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=82.1 pTM=0.769 ipTM=0.712 tol=2.17
2024-12-06 22:42:31,469 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=82.6 pTM=0.774 ipTM=0.714 tol=3.53
2024-12-06 22:42:46,200 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=82.4 pTM=0.771 ipTM=0.717 tol=1.29
2024-12-06 22:43:00,954 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=82.2 pTM=0.769 ipTM=0.71 tol=2.24
2024-12-06 22:43:15,699 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=82.3 pTM=0.771 ipTM=0.714 tol=0.879
2024-12-06 22:43:30,471 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=82.4 pTM=0.772 ipTM=0.715 tol=1.71
2024-12-06 22:43:45,208 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=82.2 pTM=0.769 ipTM=0.712 tol=1.08
2024-12-06 22:43:59,936 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=82.1 pTM=0.766 ipTM=0.708 tol=1.81
2024-12-06 22:44:14,658 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=82.2 pTM=0.769 ipTM=0.711 tol=0.971
2024-12-06 22:44:29,390 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=82.2 pTM=0.77 ipTM=0.708 tol=0.813
2024-12-06 22:44:44,127 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=82.1 pTM=0.765 ipTM=0.703 tol=1.88
2024-12-06 22:44:58,843 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=82.1 pTM=0.765 ipTM=0.701 tol=0.769
2024-12-06 22:45:13,593 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=82.1 pTM=0.768 ipTM=0.707 tol=1.1
2024-12-06 22:45:28,349 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=82.2 pTM=0.772 ipTM=0.71 tol=1.27
2024-12-06 22:45:43,095 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=82.3 pTM=0.771 ipTM=0.709 tol=0.808
2024-12-06 22:45:57,843 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=82.4 pTM=0.773 ipTM=0.708 tol=1.71
2024-12-06 22:46:12,594 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=82.5 pTM=0.773 ipTM=0.707 tol=3.55
2024-12-06 22:46:27,362 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=82.2 pTM=0.769 ipTM=0.707 tol=1.56
2024-12-06 22:46:42,151 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=82.4 pTM=0.776 ipTM=0.715 tol=2.48
2024-12-06 22:46:42,152 alphafold2_multimer_v3_model_3_seed_000 took 457.3s (30 recycles)
2024-12-06 22:46:57,371 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=76 pTM=0.681 ipTM=0.232
2024-12-06 22:47:12,210 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=77.1 pTM=0.678 ipTM=0.169 tol=7.39
2024-12-06 22:47:27,047 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=76.9 pTM=0.688 ipTM=0.211 tol=22.2
2024-12-06 22:47:41,869 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=76.8 pTM=0.693 ipTM=0.205 tol=8
2024-12-06 22:47:56,680 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=76.8 pTM=0.694 ipTM=0.26 tol=16.2
2024-12-06 22:48:11,465 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=76.7 pTM=0.698 ipTM=0.228 tol=3.38
2024-12-06 22:48:26,235 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=76.8 pTM=0.7 ipTM=0.287 tol=1.29
2024-12-06 22:48:41,013 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=76.6 pTM=0.702 ipTM=0.244 tol=2.81
2024-12-06 22:48:55,815 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=76.8 pTM=0.7 ipTM=0.23 tol=4.45
2024-12-06 22:49:10,602 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=77.1 pTM=0.707 ipTM=0.301 tol=4.54
2024-12-06 22:49:25,381 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=77.1 pTM=0.707 ipTM=0.41 tol=4.13
2024-12-06 22:49:40,158 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=76.8 pTM=0.703 ipTM=0.291 tol=3.03
2024-12-06 22:49:54,937 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=76.5 pTM=0.702 ipTM=0.246 tol=3.29
2024-12-06 22:50:09,710 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=76.1 pTM=0.704 ipTM=0.246 tol=3.92
2024-12-06 22:50:24,502 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=76.4 pTM=0.7 ipTM=0.233 tol=5.62
2024-12-06 22:50:39,303 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=76.4 pTM=0.701 ipTM=0.238 tol=4.25
2024-12-06 22:50:54,102 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=77.5 pTM=0.703 ipTM=0.461 tol=4.86
2024-12-06 22:51:08,877 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=77.4 pTM=0.707 ipTM=0.378 tol=5.25
2024-12-06 22:51:23,682 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=76.9 pTM=0.701 ipTM=0.234 tol=3.95
2024-12-06 22:51:38,458 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=77 pTM=0.699 ipTM=0.256 tol=4.27
2024-12-06 22:51:53,252 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=76.9 pTM=0.687 ipTM=0.181 tol=8.56
2024-12-06 22:52:08,015 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=77 pTM=0.704 ipTM=0.309 tol=5.96
2024-12-06 22:52:22,755 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=76.5 pTM=0.697 ipTM=0.228 tol=5.15
2024-12-06 22:52:37,517 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=76.6 pTM=0.697 ipTM=0.226 tol=4.72
2024-12-06 22:52:52,274 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=77.2 pTM=0.702 ipTM=0.335 tol=3.97
2024-12-06 22:53:07,047 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=77.4 pTM=0.701 ipTM=0.346 tol=4.33
2024-12-06 22:53:21,812 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=76.9 pTM=0.704 ipTM=0.243 tol=3.14
2024-12-06 22:53:36,565 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=76.7 pTM=0.701 ipTM=0.238 tol=4.53
2024-12-06 22:53:51,324 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=76.6 pTM=0.704 ipTM=0.247 tol=2.38
2024-12-06 22:54:06,113 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=76.5 pTM=0.706 ipTM=0.25 tol=2.77
2024-12-06 22:54:20,884 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=77.6 pTM=0.708 ipTM=0.46 tol=3.89
2024-12-06 22:54:20,884 alphafold2_multimer_v3_model_4_seed_000 took 458.3s (30 recycles)
2024-12-06 22:54:36,043 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=76.7 pTM=0.68 ipTM=0.289
2024-12-06 22:54:50,817 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=77.6 pTM=0.685 ipTM=0.265 tol=7.31
2024-12-06 22:55:05,558 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=78.2 pTM=0.705 ipTM=0.365 tol=11.2
2024-12-06 22:55:20,271 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=80.5 pTM=0.748 ipTM=0.602 tol=11.8
2024-12-06 22:55:34,998 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=81.4 pTM=0.762 ipTM=0.683 tol=5.03
2024-12-06 22:55:49,740 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=81.6 pTM=0.765 ipTM=0.704 tol=2.19
2024-12-06 22:56:04,519 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=81.9 pTM=0.769 ipTM=0.714 tol=1.56
2024-12-06 22:56:19,285 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=82 pTM=0.769 ipTM=0.719 tol=1.05
2024-12-06 22:56:34,061 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=82.2 pTM=0.774 ipTM=0.728 tol=0.884
2024-12-06 22:56:48,819 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=82.2 pTM=0.771 ipTM=0.727 tol=0.637
2024-12-06 22:57:03,599 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=82.2 pTM=0.771 ipTM=0.726 tol=0.483
2024-12-06 22:57:03,600 alphafold2_multimer_v3_model_5_seed_000 took 162.3s (10 recycles)
2024-12-06 22:57:04,036 reranking models by 'multimer' metric
2024-12-06 22:57:07,349 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-06 22:57:48,947 Relaxation took 44.9s
2024-12-06 22:57:48,947 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=82.2 pTM=0.771 ipTM=0.726
2024-12-06 22:58:13,833 Relaxation took 24.9s
2024-12-06 22:58:13,833 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=82.4 pTM=0.776 ipTM=0.715
2024-12-06 22:58:45,830 Relaxation took 32.0s
2024-12-06 22:58:45,830 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=81.9 pTM=0.763 ipTM=0.685
2024-12-06 22:59:23,618 Relaxation took 37.8s
2024-12-06 22:59:23,618 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=82.4 pTM=0.77 ipTM=0.68
2024-12-06 23:00:26,572 Relaxation took 63.0s
2024-12-06 23:00:26,572 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=77.6 pTM=0.708 ipTM=0.46
2024-12-06 23:00:28,230 Done