2024-12-06 22:55:37,990 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-06 22:55:38,308 Running on GPU
2024-12-06 22:55:41,655 Found 6 citations for tools or databases
2024-12-06 22:55:41,655 Query 1/1: KLHL36_PAPLN (length 1894)
2024-12-06 22:55:42,035 Sleeping for 5s. Reason: PENDING
2024-12-06 22:55:47,291 Sleeping for 9s. Reason: RUNNING
2024-12-06 22:55:56,551 Sleeping for 10s. Reason: RUNNING
2024-12-06 22:56:06,817 Sleeping for 10s. Reason: RUNNING
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2024-12-06 22:56:27,351 Sleeping for 8s. Reason: RUNNING
2024-12-06 22:56:35,611 Sleeping for 9s. Reason: RUNNING
2024-12-06 22:56:44,882 Sleeping for 9s. Reason: RUNNING
2024-12-06 22:56:54,140 Sleeping for 9s. Reason: RUNNING
2024-12-06 22:57:03,403 Sleeping for 5s. Reason: RUNNING
2024-12-06 22:57:08,658 Sleeping for 6s. Reason: RUNNING
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2024-12-06 22:57:46,977 Sleeping for 8s. Reason: RUNNING
2024-12-06 22:57:55,246 Sleeping for 9s. Reason: RUNNING
2024-12-06 22:58:04,513 Sleeping for 6s. Reason: RUNNING
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2024-12-06 22:58:24,469 Sleeping for 6s. Reason: RUNNING
2024-12-06 22:58:30,730 Sleeping for 7s. Reason: RUNNING
2024-12-06 22:58:37,990 Sleeping for 8s. Reason: RUNNING
2024-12-06 22:58:46,247 Sleeping for 8s. Reason: RUNNING
2024-12-06 22:58:54,509 Sleeping for 10s. Reason: RUNNING
2024-12-06 22:59:04,772 Sleeping for 5s. Reason: RUNNING
2024-12-06 22:59:10,028 Sleeping for 6s. Reason: RUNNING
2024-12-06 22:59:16,295 Sleeping for 10s. Reason: RUNNING
2024-12-06 22:59:26,553 Sleeping for 6s. Reason: RUNNING
2024-12-06 22:59:32,816 Sleeping for 9s. Reason: RUNNING
2024-12-06 22:59:42,075 Sleeping for 8s. Reason: RUNNING
2024-12-06 22:59:50,346 Sleeping for 9s. Reason: RUNNING
2024-12-06 22:59:59,609 Sleeping for 5s. Reason: RUNNING
2024-12-06 23:00:04,865 Sleeping for 8s. Reason: RUNNING
2024-12-06 23:00:13,119 Sleeping for 5s. Reason: RUNNING
2024-12-06 23:00:18,376 Sleeping for 7s. Reason: RUNNING
2024-12-06 23:00:25,654 Sleeping for 5s. Reason: RUNNING
2024-12-06 23:00:30,912 Sleeping for 6s. Reason: RUNNING
2024-12-06 23:00:37,182 Sleeping for 6s. Reason: RUNNING
2024-12-06 23:00:43,452 Sleeping for 9s. Reason: RUNNING
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2024-12-06 23:01:12,247 Sleeping for 5s. Reason: RUNNING
2024-12-06 23:01:17,502 Sleeping for 8s. Reason: RUNNING
2024-12-06 23:01:25,767 Sleeping for 7s. Reason: RUNNING
2024-12-06 23:01:33,024 Sleeping for 9s. Reason: RUNNING
2024-12-06 23:01:42,287 Sleeping for 7s. Reason: RUNNING
2024-12-06 23:01:52,138 Sleeping for 8s. Reason: PENDING
2024-12-06 23:02:00,407 Sleeping for 10s. Reason: RUNNING
2024-12-06 23:02:10,665 Sleeping for 10s. Reason: RUNNING
2024-12-06 23:02:20,934 Sleeping for 7s. Reason: RUNNING
2024-12-06 23:02:28,188 Sleeping for 7s. Reason: RUNNING
2024-12-06 23:02:35,442 Sleeping for 8s. Reason: RUNNING
2024-12-06 23:02:43,698 Sleeping for 7s. Reason: RUNNING
2024-12-06 23:02:50,972 Sleeping for 7s. Reason: RUNNING
2024-12-06 23:02:58,234 Sleeping for 5s. Reason: RUNNING
2024-12-06 23:03:03,492 Sleeping for 5s. Reason: RUNNING
2024-12-06 23:03:08,768 Sleeping for 10s. Reason: RUNNING
2024-12-06 23:03:19,029 Sleeping for 10s. Reason: RUNNING
2024-12-06 23:03:29,291 Sleeping for 7s. Reason: RUNNING
2024-12-06 23:03:36,557 Sleeping for 7s. Reason: RUNNING
2024-12-06 23:03:43,817 Sleeping for 7s. Reason: RUNNING
2024-12-06 23:03:51,069 Sleeping for 8s. Reason: RUNNING
2024-12-06 23:03:59,328 Sleeping for 6s. Reason: RUNNING
2024-12-06 23:04:05,589 Sleeping for 7s. Reason: RUNNING
2024-12-06 23:04:12,856 Sleeping for 10s. Reason: RUNNING
2024-12-06 23:04:23,129 Sleeping for 10s. Reason: RUNNING
2024-12-06 23:04:33,385 Sleeping for 9s. Reason: RUNNING
2024-12-06 23:04:42,644 Sleeping for 8s. Reason: RUNNING
2024-12-06 23:04:50,901 Sleeping for 6s. Reason: RUNNING
2024-12-06 23:04:57,162 Sleeping for 7s. Reason: RUNNING
2024-12-06 23:05:04,429 Sleeping for 10s. Reason: RUNNING
2024-12-06 23:05:14,699 Sleeping for 7s. Reason: RUNNING
2024-12-06 23:05:21,968 Sleeping for 8s. Reason: RUNNING
2024-12-06 23:05:39,659 Setting max_seq=508, max_extra_seq=2048
2024-12-06 23:10:31,804 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=63.6 pTM=0.412 ipTM=0.351
2024-12-06 23:12:46,501 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.6 pTM=0.406 ipTM=0.226 tol=13.2
2024-12-06 23:15:01,301 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.4 pTM=0.409 ipTM=0.385 tol=15.9
2024-12-06 23:17:16,090 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.4 pTM=0.419 ipTM=0.444 tol=6.97
2024-12-06 23:19:30,889 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.6 pTM=0.418 ipTM=0.407 tol=7.59
2024-12-06 23:21:45,644 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.4 pTM=0.418 ipTM=0.42 tol=3.81
2024-12-06 23:24:00,421 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64.8 pTM=0.422 ipTM=0.449 tol=5.07
2024-12-06 23:26:15,198 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.7 pTM=0.428 ipTM=0.519 tol=4.96
2024-12-06 23:28:29,977 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.9 pTM=0.429 ipTM=0.535 tol=3.84
2024-12-06 23:30:44,802 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.9 pTM=0.427 ipTM=0.499 tol=4.87
2024-12-06 23:32:59,547 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.8 pTM=0.429 ipTM=0.498 tol=5.33
2024-12-06 23:35:14,276 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=65 pTM=0.432 ipTM=0.519 tol=3.23
2024-12-06 23:37:29,002 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.9 pTM=0.434 ipTM=0.539 tol=3.43
2024-12-06 23:39:43,701 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=65.2 pTM=0.432 ipTM=0.532 tol=2.75
2024-12-06 23:41:58,393 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.9 pTM=0.432 ipTM=0.521 tol=4.96
2024-12-06 23:44:13,045 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=64.9 pTM=0.434 ipTM=0.531 tol=4.76
2024-12-06 23:46:27,664 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.8 pTM=0.436 ipTM=0.537 tol=2.87
2024-12-06 23:48:42,385 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.9 pTM=0.432 ipTM=0.532 tol=2.24
2024-12-06 23:50:57,053 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.7 pTM=0.437 ipTM=0.569 tol=3.56
2024-12-06 23:53:11,692 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.5 pTM=0.433 ipTM=0.565 tol=2.85
2024-12-06 23:55:26,305 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.4 pTM=0.437 ipTM=0.566 tol=4.39
2024-12-06 23:57:40,966 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.7 pTM=0.433 ipTM=0.565 tol=6.04
2024-12-06 23:59:55,608 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.4 pTM=0.431 ipTM=0.543 tol=3.27
2024-12-07 00:02:10,206 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=64.2 pTM=0.431 ipTM=0.554 tol=2.5
2024-12-07 00:04:24,834 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64.1 pTM=0.434 ipTM=0.56 tol=5.59
2024-12-07 00:06:39,514 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.3 pTM=0.437 ipTM=0.573 tol=5.35
2024-12-07 00:08:54,180 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.2 pTM=0.437 ipTM=0.587 tol=4.74
2024-12-07 00:11:08,797 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.5 pTM=0.434 ipTM=0.568 tol=3.47
2024-12-07 00:13:23,401 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.7 pTM=0.433 ipTM=0.549 tol=6.8
2024-12-07 00:15:38,016 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.6 pTM=0.435 ipTM=0.563 tol=4.78
2024-12-07 00:17:52,602 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=64.6 pTM=0.435 ipTM=0.559 tol=4.64
2024-12-07 00:17:52,604 alphafold2_multimer_v3_model_1_seed_000 took 4329.5s (30 recycles)
2024-12-07 00:20:09,512 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=63.5 pTM=0.417 ipTM=0.373
2024-12-07 00:22:24,435 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65.1 pTM=0.42 ipTM=0.271 tol=18.7
2024-12-07 00:24:39,267 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=65.2 pTM=0.425 ipTM=0.277 tol=10.8
2024-12-07 00:26:54,142 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.1 pTM=0.423 ipTM=0.262 tol=6.07
2024-12-07 00:29:09,004 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=65.1 pTM=0.427 ipTM=0.476 tol=11.7
2024-12-07 00:31:23,898 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.8 pTM=0.426 ipTM=0.297 tol=4.29
2024-12-07 00:33:38,834 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=65.6 pTM=0.421 ipTM=0.263 tol=9.83
2024-12-07 00:35:53,648 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=65.5 pTM=0.419 ipTM=0.254 tol=5.86
2024-12-07 00:38:08,470 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=65.8 pTM=0.418 ipTM=0.243 tol=5.16
2024-12-07 00:40:23,379 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=65.8 pTM=0.417 ipTM=0.253 tol=5.55
2024-12-07 00:42:38,209 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=65.8 pTM=0.415 ipTM=0.243 tol=4.37
2024-12-07 00:44:53,022 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=65.6 pTM=0.416 ipTM=0.239 tol=5.98
2024-12-07 00:47:07,785 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=65.7 pTM=0.421 ipTM=0.273 tol=5.73
2024-12-07 00:49:22,577 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66 pTM=0.423 ipTM=0.295 tol=8.76
2024-12-07 00:51:37,359 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.1 pTM=0.427 ipTM=0.281 tol=7.99
2024-12-07 00:53:52,109 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=65.2 pTM=0.447 ipTM=0.537 tol=10.2
2024-12-07 00:56:06,824 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66 pTM=0.432 ipTM=0.318 tol=6.84
2024-12-07 00:58:21,480 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=66.6 pTM=0.441 ipTM=0.386 tol=4.58
2024-12-07 01:00:36,273 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=66 pTM=0.421 ipTM=0.25 tol=6.14
2024-12-07 01:02:51,029 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=65.8 pTM=0.426 ipTM=0.304 tol=4.98
2024-12-07 01:05:05,886 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.1 pTM=0.418 ipTM=0.245 tol=3.75
2024-12-07 01:07:20,878 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65.8 pTM=0.412 ipTM=0.237 tol=5.04
2024-12-07 01:09:35,764 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65.7 pTM=0.411 ipTM=0.233 tol=6.33
2024-12-07 01:11:50,586 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65.2 pTM=0.419 ipTM=0.253 tol=4.22
2024-12-07 01:14:05,426 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65.7 pTM=0.42 ipTM=0.259 tol=4.82
2024-12-07 01:16:20,252 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65.9 pTM=0.417 ipTM=0.248 tol=4.25
2024-12-07 01:18:35,076 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66 pTM=0.416 ipTM=0.237 tol=5.09
2024-12-07 01:20:49,929 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.4 pTM=0.428 ipTM=0.406 tol=9.3
2024-12-07 01:23:04,899 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.7 pTM=0.414 ipTM=0.233 tol=7.48
2024-12-07 01:25:19,720 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.4 pTM=0.417 ipTM=0.251 tol=7.3
2024-12-07 01:27:34,603 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.8 pTM=0.416 ipTM=0.239 tol=6.67
2024-12-07 01:27:34,605 alphafold2_multimer_v3_model_2_seed_000 took 4179.9s (30 recycles)
2024-12-07 01:29:51,785 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=61.8 pTM=0.415 ipTM=0.288
2024-12-07 01:32:06,743 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63.4 pTM=0.407 ipTM=0.277 tol=15.6
2024-12-07 01:34:21,759 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63.7 pTM=0.443 ipTM=0.39 tol=22.4
2024-12-07 01:36:36,686 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.1 pTM=0.442 ipTM=0.334 tol=22.3
2024-12-07 01:38:51,759 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=63.5 pTM=0.422 ipTM=0.303 tol=13.1
2024-12-07 01:41:06,862 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63.7 pTM=0.423 ipTM=0.282 tol=8.6
2024-12-07 01:43:21,964 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=64 pTM=0.426 ipTM=0.29 tol=9.08
2024-12-07 01:45:37,083 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=63 pTM=0.426 ipTM=0.293 tol=9.76
2024-12-07 01:47:52,114 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=63.2 pTM=0.424 ipTM=0.277 tol=16.6
2024-12-07 01:50:06,975 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=63.7 pTM=0.441 ipTM=0.324 tol=13.9
2024-12-07 01:52:21,930 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63.5 pTM=0.417 ipTM=0.238 tol=11.5
2024-12-07 01:54:36,968 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.8 pTM=0.429 ipTM=0.303 tol=16.4
2024-12-07 01:56:51,992 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=63.2 pTM=0.422 ipTM=0.261 tol=15.3
2024-12-07 01:59:06,948 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=63.2 pTM=0.429 ipTM=0.333 tol=12.5
2024-12-07 02:01:21,972 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=63.2 pTM=0.416 ipTM=0.246 tol=10.3
2024-12-07 02:03:36,934 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.8 pTM=0.443 ipTM=0.326 tol=18.5
2024-12-07 02:05:51,873 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=63.2 pTM=0.437 ipTM=0.321 tol=18.4
2024-12-07 02:08:06,893 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=63 pTM=0.416 ipTM=0.245 tol=9.76
2024-12-07 02:10:21,848 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=62.5 pTM=0.437 ipTM=0.337 tol=17.7
2024-12-07 02:12:36,822 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.3 pTM=0.423 ipTM=0.266 tol=16
2024-12-07 02:14:51,850 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63.2 pTM=0.429 ipTM=0.335 tol=9.51
2024-12-07 02:17:06,955 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.3 pTM=0.416 ipTM=0.237 tol=10.4
2024-12-07 02:19:21,951 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=63.3 pTM=0.422 ipTM=0.27 tol=6.76
2024-12-07 02:21:36,780 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.2 pTM=0.434 ipTM=0.422 tol=9.44
2024-12-07 02:23:51,738 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=62.8 pTM=0.413 ipTM=0.233 tol=6.54
2024-12-07 02:26:06,776 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=62.5 pTM=0.422 ipTM=0.287 tol=20.7
2024-12-07 02:28:21,753 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63.2 pTM=0.42 ipTM=0.256 tol=17.6
2024-12-07 02:30:36,722 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.5 pTM=0.432 ipTM=0.333 tol=9.84
2024-12-07 02:32:51,743 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.4 pTM=0.417 ipTM=0.242 tol=10.1
2024-12-07 02:35:06,780 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63 pTM=0.418 ipTM=0.247 tol=11.5
2024-12-07 02:37:21,771 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=63.8 pTM=0.43 ipTM=0.313 tol=11.9
2024-12-07 02:37:21,773 alphafold2_multimer_v3_model_3_seed_000 took 4185.1s (30 recycles)
2024-12-07 02:39:39,221 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.8 pTM=0.411 ipTM=0.298
2024-12-07 02:41:54,201 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=63 pTM=0.461 ipTM=0.47 tol=23.5
2024-12-07 02:44:09,456 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=63 pTM=0.42 ipTM=0.282 tol=19.4
2024-12-07 02:46:24,711 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=63.4 pTM=0.423 ipTM=0.275 tol=13.3
2024-12-07 02:48:39,847 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=63.5 pTM=0.427 ipTM=0.289 tol=8.27
2024-12-07 02:50:55,011 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=63.4 pTM=0.429 ipTM=0.308 tol=6.95
2024-12-07 02:53:10,046 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63.9 pTM=0.445 ipTM=0.351 tol=5.64
2024-12-07 02:55:25,062 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64 pTM=0.469 ipTM=0.404 tol=11.6
2024-12-07 02:57:40,080 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64 pTM=0.445 ipTM=0.35 tol=10.1
2024-12-07 02:59:55,015 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64.3 pTM=0.46 ipTM=0.537 tol=8.3
2024-12-07 03:02:09,949 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=63.8 pTM=0.486 ipTM=0.567 tol=15.4
2024-12-07 03:04:24,935 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=63.7 pTM=0.471 ipTM=0.402 tol=6.16
2024-12-07 03:06:39,935 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.1 pTM=0.472 ipTM=0.439 tol=8.23
2024-12-07 03:08:54,954 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.6 pTM=0.472 ipTM=0.43 tol=4.42
2024-12-07 03:11:09,993 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.7 pTM=0.48 ipTM=0.497 tol=8.32
2024-12-07 03:13:25,026 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=65.2 pTM=0.494 ipTM=0.547 tol=10.8
2024-12-07 03:15:39,969 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65.1 pTM=0.493 ipTM=0.538 tol=5.69
2024-12-07 03:17:54,886 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=65.3 pTM=0.489 ipTM=0.527 tol=5.93
2024-12-07 03:20:09,788 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=65 pTM=0.497 ipTM=0.542 tol=7.59
2024-12-07 03:22:24,657 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=65.6 pTM=0.495 ipTM=0.512 tol=6.07
2024-12-07 03:24:39,544 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.9 pTM=0.488 ipTM=0.514 tol=5.48
2024-12-07 03:26:54,436 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=65.6 pTM=0.51 ipTM=0.592 tol=4.59
2024-12-07 03:29:09,292 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65.2 pTM=0.505 ipTM=0.546 tol=5.51
2024-12-07 03:31:24,123 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.1 pTM=0.492 ipTM=0.495 tol=4.86
2024-12-07 03:33:39,001 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.8 pTM=0.476 ipTM=0.512 tol=6.86
2024-12-07 03:35:53,877 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=65.2 pTM=0.489 ipTM=0.529 tol=6.32
2024-12-07 03:38:08,811 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.8 pTM=0.489 ipTM=0.541 tol=9.12
2024-12-07 03:40:23,722 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=65.6 pTM=0.502 ipTM=0.554 tol=13
2024-12-07 03:42:38,698 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=65.1 pTM=0.49 ipTM=0.543 tol=7.59
2024-12-07 03:44:53,661 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=65 pTM=0.488 ipTM=0.496 tol=7.5
2024-12-07 03:47:08,563 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.7 pTM=0.47 ipTM=0.465 tol=7.83
2024-12-07 03:47:08,565 alphafold2_multimer_v3_model_4_seed_000 took 4184.7s (30 recycles)
2024-12-07 03:49:25,823 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=60.3 pTM=0.401 ipTM=0.234
2024-12-07 03:51:40,937 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62.7 pTM=0.416 ipTM=0.414 tol=19.9
2024-12-07 03:53:55,966 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=63 pTM=0.419 ipTM=0.257 tol=11.8
2024-12-07 03:56:10,929 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=62.8 pTM=0.414 ipTM=0.226 tol=11
2024-12-07 03:58:25,991 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=62.8 pTM=0.411 ipTM=0.206 tol=7.8
2024-12-07 04:00:40,985 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=62.9 pTM=0.415 ipTM=0.254 tol=8.53
2024-12-07 04:02:55,943 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=63 pTM=0.415 ipTM=0.256 tol=4.38
2024-12-07 04:05:10,896 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=63.2 pTM=0.415 ipTM=0.217 tol=5.13
2024-12-07 04:07:25,783 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63.1 pTM=0.42 ipTM=0.381 tol=6.91
2024-12-07 04:09:40,583 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=63.7 pTM=0.424 ipTM=0.32 tol=5.78
2024-12-07 04:11:55,468 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=63.4 pTM=0.417 ipTM=0.238 tol=3.78
2024-12-07 04:14:10,369 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=63.3 pTM=0.414 ipTM=0.214 tol=3.45
2024-12-07 04:16:25,182 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.1 pTM=0.414 ipTM=0.217 tol=12.8
2024-12-07 04:18:40,120 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.9 pTM=0.416 ipTM=0.237 tol=13.9
2024-12-07 04:20:55,053 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.4 pTM=0.42 ipTM=0.264 tol=6.37
2024-12-07 04:23:09,980 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=63.3 pTM=0.42 ipTM=0.26 tol=6.47
2024-12-07 04:25:24,894 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=63.4 pTM=0.416 ipTM=0.236 tol=7.57
2024-12-07 04:27:39,987 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=63.3 pTM=0.406 ipTM=0.212 tol=9.24
2024-12-07 04:29:54,973 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=63.4 pTM=0.412 ipTM=0.306 tol=9.32
2024-12-07 04:32:09,926 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=63.7 pTM=0.415 ipTM=0.28 tol=5.71
2024-12-07 04:34:24,894 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=63.7 pTM=0.413 ipTM=0.217 tol=5.41
2024-12-07 04:36:39,884 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=63.8 pTM=0.413 ipTM=0.23 tol=6.79
2024-12-07 04:38:54,788 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=63.8 pTM=0.429 ipTM=0.469 tol=5.62
2024-12-07 04:41:09,582 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=64.1 pTM=0.449 ipTM=0.415 tol=7.53
2024-12-07 04:43:24,301 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=64.5 pTM=0.45 ipTM=0.354 tol=8.79
2024-12-07 04:45:39,079 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=64.2 pTM=0.443 ipTM=0.328 tol=4.68
2024-12-07 04:47:53,817 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=64.9 pTM=0.467 ipTM=0.537 tol=4.27
2024-12-07 04:50:08,493 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.3 pTM=0.488 ipTM=0.522 tol=3.81
2024-12-07 04:52:23,171 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.2 pTM=0.479 ipTM=0.519 tol=2.16
2024-12-07 04:54:37,857 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65 pTM=0.483 ipTM=0.502 tol=1.94
2024-12-07 04:56:52,575 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=64.9 pTM=0.462 ipTM=0.462 tol=4.71
2024-12-07 04:56:52,577 alphafold2_multimer_v3_model_5_seed_000 took 4181.9s (30 recycles)
2024-12-07 04:56:54,652 reranking models by 'multimer' metric
2024-12-07 04:56:58,762 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 05:01:56,442 Relaxation took 301.8s
2024-12-07 05:01:56,442 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=64.6 pTM=0.435 ipTM=0.559
2024-12-07 05:06:17,090 Relaxation took 260.6s
2024-12-07 05:06:17,090 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.7 pTM=0.47 ipTM=0.465
2024-12-07 05:12:04,974 Relaxation took 347.9s
2024-12-07 05:12:04,974 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=64.9 pTM=0.462 ipTM=0.462
2024-12-07 05:18:51,013 Relaxation took 406.0s
2024-12-07 05:18:51,014 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=63.8 pTM=0.43 ipTM=0.313
2024-12-07 05:24:24,577 Relaxation took 333.6s
2024-12-07 05:24:24,578 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.8 pTM=0.416 ipTM=0.239
2024-12-07 05:24:29,294 Done