2024-12-06 23:46:07,918 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-06 23:46:08,219 Running on GPU 2024-12-06 23:46:11,695 Found 6 citations for tools or databases 2024-12-06 23:46:11,695 Query 1/1: KLHL9_ATP1A4 (length 1646) 2024-12-06 23:46:12,019 Sleeping for 10s. Reason: PENDING 2024-12-06 23:46:22,295 Sleeping for 6s. Reason: RUNNING 2024-12-06 23:46:28,579 Sleeping for 9s. Reason: RUNNING 2024-12-06 23:46:37,852 Sleeping for 7s. Reason: RUNNING 2024-12-06 23:46:45,154 Sleeping for 5s. Reason: RUNNING 2024-12-06 23:46:50,422 Sleeping for 7s. Reason: RUNNING 2024-12-06 23:46:57,695 Sleeping for 7s. Reason: RUNNING 2024-12-06 23:47:04,963 Sleeping for 10s. Reason: RUNNING 2024-12-06 23:47:15,236 Sleeping for 5s. Reason: RUNNING 2024-12-06 23:47:20,511 Sleeping for 10s. Reason: RUNNING 2024-12-06 23:47:30,782 Sleeping for 6s. Reason: RUNNING 2024-12-06 23:47:37,052 Sleeping for 10s. Reason: RUNNING 2024-12-06 23:47:47,337 Sleeping for 9s. Reason: RUNNING 2024-12-06 23:47:56,598 Sleeping for 7s. Reason: RUNNING 2024-12-06 23:48:03,866 Sleeping for 6s. Reason: RUNNING 2024-12-06 23:48:10,132 Sleeping for 6s. Reason: RUNNING 2024-12-06 23:48:16,398 Sleeping for 6s. Reason: RUNNING 2024-12-06 23:48:22,658 Sleeping for 10s. Reason: RUNNING 2024-12-06 23:48:32,935 Sleeping for 6s. Reason: RUNNING 2024-12-06 23:48:39,211 Sleeping for 7s. Reason: RUNNING 2024-12-06 23:48:46,470 Sleeping for 8s. Reason: RUNNING 2024-12-06 23:48:54,758 Sleeping for 10s. Reason: RUNNING 2024-12-06 23:49:05,034 Sleeping for 10s. Reason: RUNNING 2024-12-06 23:49:15,296 Sleeping for 5s. Reason: RUNNING 2024-12-06 23:49:20,547 Sleeping for 5s. Reason: RUNNING 2024-12-06 23:49:25,812 Sleeping for 8s. Reason: RUNNING 2024-12-06 23:49:34,106 Sleeping for 5s. Reason: RUNNING 2024-12-06 23:49:39,395 Sleeping for 8s. Reason: RUNNING 2024-12-06 23:49:47,669 Sleeping for 7s. Reason: RUNNING 2024-12-06 23:49:54,938 Sleeping for 10s. Reason: RUNNING 2024-12-06 23:50:05,201 Sleeping for 5s. Reason: RUNNING 2024-12-06 23:50:10,474 Sleeping for 8s. Reason: RUNNING 2024-12-06 23:50:18,909 Sleeping for 8s. Reason: RUNNING 2024-12-06 23:50:27,173 Sleeping for 7s. Reason: RUNNING 2024-12-06 23:50:34,451 Sleeping for 8s. Reason: RUNNING 2024-12-06 23:50:42,712 Sleeping for 9s. Reason: RUNNING 2024-12-06 23:50:51,988 Sleeping for 10s. Reason: RUNNING 2024-12-06 23:51:02,266 Sleeping for 10s. Reason: RUNNING 2024-12-06 23:51:12,527 Sleeping for 8s. Reason: RUNNING 2024-12-06 23:51:20,788 Sleeping for 7s. Reason: RUNNING 2024-12-06 23:51:28,051 Sleeping for 8s. Reason: RUNNING 2024-12-06 23:51:36,330 Sleeping for 8s. Reason: RUNNING 2024-12-06 23:51:44,598 Sleeping for 6s. Reason: RUNNING 2024-12-06 23:51:50,858 Sleeping for 7s. Reason: RUNNING 2024-12-06 23:51:58,131 Sleeping for 6s. Reason: RUNNING 2024-12-06 23:52:04,400 Sleeping for 10s. Reason: RUNNING 2024-12-06 23:52:14,659 Sleeping for 5s. Reason: RUNNING 2024-12-06 23:52:19,924 Sleeping for 5s. Reason: RUNNING 2024-12-06 23:52:25,194 Sleeping for 5s. Reason: RUNNING 2024-12-06 23:52:30,464 Sleeping for 7s. Reason: RUNNING 2024-12-06 23:52:37,735 Sleeping for 7s. Reason: RUNNING 2024-12-06 23:52:44,998 Sleeping for 9s. Reason: RUNNING 2024-12-06 23:52:54,256 Sleeping for 10s. Reason: RUNNING 2024-12-06 23:53:04,530 Sleeping for 5s. Reason: RUNNING 2024-12-06 23:53:09,791 Sleeping for 10s. Reason: RUNNING 2024-12-06 23:53:20,064 Sleeping for 6s. Reason: RUNNING 2024-12-06 23:53:26,321 Sleeping for 7s. Reason: RUNNING 2024-12-06 23:53:33,589 Sleeping for 10s. Reason: RUNNING 2024-12-06 23:53:43,858 Sleeping for 9s. Reason: RUNNING 2024-12-06 23:53:53,128 Sleeping for 9s. Reason: RUNNING 2024-12-06 23:54:02,406 Sleeping for 5s. Reason: RUNNING 2024-12-06 23:54:07,669 Sleeping for 6s. Reason: RUNNING 2024-12-06 23:54:13,939 Sleeping for 5s. Reason: RUNNING 2024-12-06 23:54:19,218 Sleeping for 5s. Reason: RUNNING 2024-12-06 23:54:27,776 Sleeping for 10s. Reason: PENDING 2024-12-06 23:54:38,052 Sleeping for 10s. Reason: RUNNING 2024-12-06 23:54:48,317 Sleeping for 10s. Reason: RUNNING 2024-12-06 23:54:58,584 Sleeping for 5s. Reason: RUNNING 2024-12-06 23:55:03,838 Sleeping for 6s. Reason: RUNNING 2024-12-06 23:55:10,105 Sleeping for 9s. Reason: RUNNING 2024-12-06 23:55:19,373 Sleeping for 6s. Reason: RUNNING 2024-12-06 23:55:25,643 Sleeping for 7s. Reason: RUNNING 2024-12-06 23:55:32,914 Sleeping for 5s. Reason: RUNNING 2024-12-06 23:55:38,175 Sleeping for 7s. Reason: RUNNING 2024-12-06 23:55:45,449 Sleeping for 5s. Reason: RUNNING 2024-12-06 23:55:50,737 Sleeping for 5s. Reason: RUNNING 2024-12-06 23:55:55,998 Sleeping for 8s. Reason: RUNNING 2024-12-06 23:56:04,277 Sleeping for 9s. Reason: RUNNING 2024-12-06 23:56:13,545 Sleeping for 8s. Reason: RUNNING 2024-12-06 23:56:21,809 Sleeping for 10s. Reason: RUNNING 2024-12-06 23:56:32,089 Sleeping for 10s. Reason: RUNNING 2024-12-06 23:56:42,365 Sleeping for 10s. Reason: RUNNING 2024-12-06 23:56:52,641 Sleeping for 9s. Reason: RUNNING 2024-12-06 23:57:01,908 Sleeping for 9s. Reason: RUNNING 2024-12-06 23:57:11,173 Sleeping for 10s. Reason: RUNNING 2024-12-06 23:57:21,440 Sleeping for 9s. Reason: RUNNING 2024-12-06 23:57:30,703 Sleeping for 5s. Reason: RUNNING 2024-12-06 23:57:35,960 Sleeping for 9s. Reason: RUNNING 2024-12-06 23:57:45,223 Sleeping for 5s. Reason: RUNNING 2024-12-06 23:57:50,479 Sleeping for 5s. Reason: RUNNING 2024-12-06 23:57:55,746 Sleeping for 9s. Reason: RUNNING 2024-12-06 23:58:05,015 Sleeping for 6s. Reason: RUNNING 2024-12-06 23:58:11,284 Sleeping for 6s. Reason: RUNNING 2024-12-06 23:58:17,552 Sleeping for 8s. Reason: RUNNING 2024-12-06 23:58:25,833 Sleeping for 10s. Reason: RUNNING 2024-12-06 23:58:36,112 Sleeping for 10s. Reason: RUNNING 2024-12-06 23:58:46,465 Sleeping for 7s. Reason: RUNNING 2024-12-06 23:58:53,747 Sleeping for 8s. Reason: RUNNING 2024-12-06 23:59:02,016 Sleeping for 5s. Reason: RUNNING 2024-12-06 23:59:07,271 Sleeping for 8s. Reason: RUNNING 2024-12-06 23:59:15,541 Sleeping for 6s. Reason: RUNNING 2024-12-06 23:59:21,810 Sleeping for 6s. Reason: RUNNING 2024-12-06 23:59:28,078 Sleeping for 8s. Reason: RUNNING 2024-12-06 23:59:36,347 Sleeping for 9s. Reason: RUNNING 2024-12-06 23:59:45,635 Sleeping for 6s. Reason: RUNNING 2024-12-06 23:59:51,891 Sleeping for 7s. Reason: RUNNING 2024-12-06 23:59:59,153 Sleeping for 5s. Reason: RUNNING 2024-12-07 00:00:04,426 Sleeping for 9s. Reason: RUNNING 2024-12-07 00:00:13,731 Sleeping for 9s. Reason: RUNNING 2024-12-07 00:00:22,997 Sleeping for 8s. Reason: RUNNING 2024-12-07 00:00:31,256 Sleeping for 5s. Reason: RUNNING 2024-12-07 00:00:36,548 Sleeping for 5s. Reason: RUNNING 2024-12-07 00:00:41,858 Sleeping for 7s. Reason: RUNNING 2024-12-07 00:00:57,667 Setting max_seq=508, max_extra_seq=2048 2024-12-07 00:04:56,646 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=79.6 pTM=0.511 ipTM=0.173 2024-12-07 00:06:21,316 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=81 pTM=0.536 ipTM=0.197 tol=9.24 2024-12-07 00:07:45,981 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=81.8 pTM=0.543 ipTM=0.203 tol=2.37 2024-12-07 00:09:10,700 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=82.1 pTM=0.544 ipTM=0.205 tol=1.54 2024-12-07 00:10:35,339 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=82.1 pTM=0.548 ipTM=0.215 tol=1.82 2024-12-07 00:11:59,950 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=82 pTM=0.545 ipTM=0.215 tol=1.51 2024-12-07 00:13:24,601 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=82.2 pTM=0.551 ipTM=0.224 tol=1.78 2024-12-07 00:14:49,228 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=82.3 pTM=0.552 ipTM=0.22 tol=2.77 2024-12-07 00:16:13,841 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=82.2 pTM=0.557 ipTM=0.244 tol=4.29 2024-12-07 00:17:38,418 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=82.1 pTM=0.561 ipTM=0.233 tol=1.31 2024-12-07 00:19:03,009 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=82.4 pTM=0.565 ipTM=0.266 tol=1.9 2024-12-07 00:20:27,574 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=82.6 pTM=0.565 ipTM=0.251 tol=1.07 2024-12-07 00:21:52,121 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=82.6 pTM=0.571 ipTM=0.279 tol=1.36 2024-12-07 00:23:16,657 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=82.5 pTM=0.566 ipTM=0.256 tol=1.19 2024-12-07 00:24:41,159 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=82.8 pTM=0.581 ipTM=0.308 tol=1.54 2024-12-07 00:26:05,726 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=82.6 pTM=0.573 ipTM=0.268 tol=1.77 2024-12-07 00:27:30,247 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=82.6 pTM=0.573 ipTM=0.278 tol=1.32 2024-12-07 00:28:54,762 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=82.6 pTM=0.567 ipTM=0.256 tol=2.3 2024-12-07 00:30:19,293 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=82.5 pTM=0.574 ipTM=0.28 tol=1.51 2024-12-07 00:31:43,893 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=82.3 pTM=0.566 ipTM=0.253 tol=1.52 2024-12-07 00:33:08,451 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=82.4 pTM=0.571 ipTM=0.28 tol=1.36 2024-12-07 00:34:32,967 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=82.4 pTM=0.569 ipTM=0.263 tol=1.11 2024-12-07 00:35:57,469 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=82.5 pTM=0.572 ipTM=0.283 tol=1.76 2024-12-07 00:37:22,018 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=82.4 pTM=0.566 ipTM=0.253 tol=1.35 2024-12-07 00:38:46,526 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=82.6 pTM=0.57 ipTM=0.271 tol=1.03 2024-12-07 00:40:11,039 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=82.6 pTM=0.568 ipTM=0.252 tol=1.41 2024-12-07 00:41:35,553 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=82.8 pTM=0.571 ipTM=0.274 tol=1.42 2024-12-07 00:43:00,025 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=82.4 pTM=0.565 ipTM=0.253 tol=1.91 2024-12-07 00:44:24,485 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=82.4 pTM=0.57 ipTM=0.271 tol=1.55 2024-12-07 00:45:48,932 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=82.6 pTM=0.569 ipTM=0.262 tol=1.25 2024-12-07 00:47:13,372 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=82.6 pTM=0.571 ipTM=0.276 tol=1.25 2024-12-07 00:47:13,374 alphafold2_multimer_v3_model_1_seed_000 took 2770.7s (30 recycles) 2024-12-07 00:48:40,012 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=77.2 pTM=0.514 ipTM=0.173 2024-12-07 00:50:04,773 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=78.5 pTM=0.513 ipTM=0.184 tol=18.7 2024-12-07 00:51:29,575 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=80.7 pTM=0.538 ipTM=0.202 tol=19.4 2024-12-07 00:52:54,329 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=81.3 pTM=0.539 ipTM=0.211 tol=2.74 2024-12-07 00:54:19,074 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=81.2 pTM=0.538 ipTM=0.216 tol=1.41 2024-12-07 00:55:43,804 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=81.1 pTM=0.533 ipTM=0.204 tol=0.986 2024-12-07 00:57:08,552 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=81.9 pTM=0.537 ipTM=0.211 tol=0.996 2024-12-07 00:58:33,283 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=81.7 pTM=0.536 ipTM=0.21 tol=0.836 2024-12-07 00:59:58,059 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=81.7 pTM=0.534 ipTM=0.204 tol=0.878 2024-12-07 01:01:22,904 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=81.7 pTM=0.531 ipTM=0.193 tol=1.5 2024-12-07 01:02:47,714 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=82.1 pTM=0.533 ipTM=0.197 tol=0.595 2024-12-07 01:04:12,517 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=81.9 pTM=0.533 ipTM=0.199 tol=0.82 2024-12-07 01:05:37,304 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=81.8 pTM=0.535 ipTM=0.205 tol=0.696 2024-12-07 01:07:02,144 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=82 pTM=0.538 ipTM=0.205 tol=0.749 2024-12-07 01:08:26,939 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=82.1 pTM=0.537 ipTM=0.212 tol=0.958 2024-12-07 01:09:51,725 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=82 pTM=0.539 ipTM=0.213 tol=0.608 2024-12-07 01:11:16,528 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=81.9 pTM=0.535 ipTM=0.207 tol=0.724 2024-12-07 01:12:41,374 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=81.8 pTM=0.532 ipTM=0.201 tol=0.42 2024-12-07 01:12:41,376 alphafold2_multimer_v3_model_2_seed_000 took 1526.4s (17 recycles) 2024-12-07 01:14:07,842 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=80.6 pTM=0.525 ipTM=0.188 2024-12-07 01:15:32,562 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=80.8 pTM=0.526 ipTM=0.193 tol=3.86 2024-12-07 01:16:57,267 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=80.8 pTM=0.526 ipTM=0.186 tol=22.8 2024-12-07 01:18:21,936 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=81.6 pTM=0.533 ipTM=0.19 tol=19.3 2024-12-07 01:19:46,651 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=81.6 pTM=0.532 ipTM=0.195 tol=2.2 2024-12-07 01:21:11,426 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=81.5 pTM=0.53 ipTM=0.187 tol=0.973 2024-12-07 01:22:36,220 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=81.6 pTM=0.533 ipTM=0.189 tol=2.57 2024-12-07 01:24:00,891 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=81.6 pTM=0.528 ipTM=0.193 tol=2.32 2024-12-07 01:25:25,733 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=81.4 pTM=0.531 ipTM=0.187 tol=9.72 2024-12-07 01:26:50,469 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=81.5 pTM=0.528 ipTM=0.188 tol=8.33 2024-12-07 01:28:15,231 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=81.9 pTM=0.537 ipTM=0.196 tol=2.44 2024-12-07 01:29:39,966 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=81.8 pTM=0.529 ipTM=0.189 tol=2.92 2024-12-07 01:31:04,833 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=81.6 pTM=0.533 ipTM=0.188 tol=9.54 2024-12-07 01:32:29,643 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=81.4 pTM=0.525 ipTM=0.184 tol=8.72 2024-12-07 01:33:54,487 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=81.7 pTM=0.535 ipTM=0.193 tol=9.71 2024-12-07 01:35:19,212 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=81.7 pTM=0.525 ipTM=0.188 tol=9.15 2024-12-07 01:36:43,929 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=81.6 pTM=0.532 ipTM=0.198 tol=1.96 2024-12-07 01:38:08,588 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=81.8 pTM=0.528 ipTM=0.199 tol=3.23 2024-12-07 01:39:33,365 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=81.5 pTM=0.531 ipTM=0.19 tol=9.98 2024-12-07 01:40:58,047 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=81.7 pTM=0.526 ipTM=0.191 tol=8.75 2024-12-07 01:42:22,778 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=81.6 pTM=0.533 ipTM=0.198 tol=1.44 2024-12-07 01:43:47,502 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=81.6 pTM=0.526 ipTM=0.197 tol=2.06 2024-12-07 01:45:12,311 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=81.6 pTM=0.533 ipTM=0.197 tol=2.65 2024-12-07 01:46:37,036 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=81.7 pTM=0.527 ipTM=0.191 tol=2.79 2024-12-07 01:48:01,722 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=81.7 pTM=0.532 ipTM=0.2 tol=1.32 2024-12-07 01:49:26,472 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=81.8 pTM=0.527 ipTM=0.187 tol=1.32 2024-12-07 01:50:51,242 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=81.8 pTM=0.534 ipTM=0.194 tol=3.12 2024-12-07 01:52:15,929 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=81.8 pTM=0.525 ipTM=0.189 tol=2.48 2024-12-07 01:53:40,720 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=81.8 pTM=0.535 ipTM=0.195 tol=2.84 2024-12-07 01:55:05,441 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=81.4 pTM=0.523 ipTM=0.192 tol=2.44 2024-12-07 01:56:30,230 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=81.9 pTM=0.533 ipTM=0.186 tol=11.6 2024-12-07 01:56:30,232 alphafold2_multimer_v3_model_3_seed_000 took 2627.2s (30 recycles) 2024-12-07 01:57:56,513 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=79.9 pTM=0.538 ipTM=0.209 2024-12-07 01:59:21,272 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=81.4 pTM=0.539 ipTM=0.207 tol=7.37 2024-12-07 02:00:45,920 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=82 pTM=0.549 ipTM=0.231 tol=4.3 2024-12-07 02:02:10,574 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=82.5 pTM=0.548 ipTM=0.223 tol=1.02 2024-12-07 02:03:35,235 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=82.5 pTM=0.55 ipTM=0.232 tol=1.7 2024-12-07 02:04:59,894 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=82.5 pTM=0.547 ipTM=0.228 tol=1.34 2024-12-07 02:06:24,524 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=82.8 pTM=0.555 ipTM=0.244 tol=1.21 2024-12-07 02:07:49,173 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=82.8 pTM=0.547 ipTM=0.231 tol=1.01 2024-12-07 02:09:13,843 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=82.9 pTM=0.548 ipTM=0.226 tol=0.819 2024-12-07 02:10:38,498 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=82.8 pTM=0.546 ipTM=0.221 tol=0.718 2024-12-07 02:12:03,157 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=82.8 pTM=0.548 ipTM=0.225 tol=0.484 2024-12-07 02:12:03,158 alphafold2_multimer_v3_model_4_seed_000 took 931.3s (10 recycles) 2024-12-07 02:13:29,721 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=78.8 pTM=0.507 ipTM=0.167 2024-12-07 02:14:54,546 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=80.1 pTM=0.519 ipTM=0.192 tol=10.4 2024-12-07 02:16:19,339 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=80.8 pTM=0.519 ipTM=0.193 tol=1.92 2024-12-07 02:17:44,116 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=81.1 pTM=0.521 ipTM=0.196 tol=1.88 2024-12-07 02:19:08,764 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=81.4 pTM=0.53 ipTM=0.217 tol=2.86 2024-12-07 02:20:33,378 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=81.4 pTM=0.539 ipTM=0.235 tol=2.24 2024-12-07 02:21:57,944 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=81.2 pTM=0.54 ipTM=0.243 tol=1.26 2024-12-07 02:23:22,534 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=82 pTM=0.55 ipTM=0.255 tol=0.61 2024-12-07 02:24:47,136 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=81.5 pTM=0.543 ipTM=0.248 tol=0.65 2024-12-07 02:26:11,769 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=81.7 pTM=0.547 ipTM=0.24 tol=0.847 2024-12-07 02:27:36,374 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=81.9 pTM=0.549 ipTM=0.247 tol=0.863 2024-12-07 02:29:01,006 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=82 pTM=0.551 ipTM=0.249 tol=0.593 2024-12-07 02:30:25,657 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=81.9 pTM=0.552 ipTM=0.25 tol=1.4 2024-12-07 02:31:50,313 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=81.9 pTM=0.549 ipTM=0.248 tol=1.12 2024-12-07 02:33:14,978 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=81.9 pTM=0.547 ipTM=0.247 tol=0.815 2024-12-07 02:34:39,617 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=81.8 pTM=0.546 ipTM=0.246 tol=1.09 2024-12-07 02:36:04,270 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=81.6 pTM=0.542 ipTM=0.234 tol=1.21 2024-12-07 02:37:28,886 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=81.8 pTM=0.544 ipTM=0.241 tol=0.514 2024-12-07 02:38:53,526 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=81.5 pTM=0.542 ipTM=0.232 tol=0.658 2024-12-07 02:40:18,142 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=81.7 pTM=0.544 ipTM=0.24 tol=0.895 2024-12-07 02:41:42,796 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=81.8 pTM=0.543 ipTM=0.23 tol=0.992 2024-12-07 02:43:07,423 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=81.7 pTM=0.544 ipTM=0.242 tol=0.623 2024-12-07 02:44:32,059 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=81.6 pTM=0.544 ipTM=0.241 tol=0.663 2024-12-07 02:45:56,679 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=81.7 pTM=0.545 ipTM=0.239 tol=1.29 2024-12-07 02:47:21,307 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=81.8 pTM=0.543 ipTM=0.231 tol=1.29 2024-12-07 02:48:45,942 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=81.7 pTM=0.542 ipTM=0.227 tol=0.687 2024-12-07 02:50:10,598 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=81.8 pTM=0.545 ipTM=0.238 tol=0.719 2024-12-07 02:51:35,265 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=81.8 pTM=0.543 ipTM=0.236 tol=0.878 2024-12-07 02:52:59,934 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=81.6 pTM=0.543 ipTM=0.238 tol=1.09 2024-12-07 02:54:24,549 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=81.6 pTM=0.545 ipTM=0.245 tol=0.675 2024-12-07 02:55:49,204 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=81.9 pTM=0.545 ipTM=0.231 tol=0.96 2024-12-07 02:55:49,205 alphafold2_multimer_v3_model_5_seed_000 took 2624.4s (30 recycles) 2024-12-07 02:55:50,784 reranking models by 'multimer' metric 2024-12-07 02:55:54,788 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-07 02:57:20,042 Relaxation took 89.3s 2024-12-07 02:57:20,042 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=82.6 pTM=0.571 ipTM=0.276 2024-12-07 02:58:35,750 Relaxation took 75.7s 2024-12-07 02:58:35,750 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=81.9 pTM=0.545 ipTM=0.231 2024-12-07 03:00:54,422 Relaxation took 138.7s 2024-12-07 03:00:54,422 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=82.8 pTM=0.548 ipTM=0.225 2024-12-07 03:02:22,784 Relaxation took 88.4s 2024-12-07 03:02:22,784 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=81.8 pTM=0.532 ipTM=0.201 2024-12-07 03:03:46,436 Relaxation took 83.6s 2024-12-07 03:03:46,436 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=81.9 pTM=0.533 ipTM=0.186 2024-12-07 03:03:50,341 Done