2024-12-07 00:06:53,447 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 00:06:53,754 Running on GPU
2024-12-07 00:06:57,368 Found 6 citations for tools or databases
2024-12-07 00:06:57,368 Query 1/1: KLHL9_MYH8 (length 2554)
2024-12-07 00:06:57,658 Sleeping for 9s. Reason: PENDING
2024-12-07 00:07:06,930 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:07:16,202 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:07:25,471 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:07:30,739 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:07:38,001 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:07:45,268 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:07:52,531 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:08:00,797 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:08:06,058 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:08:14,354 Sleeping for 10s. Reason: RUNNING
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2024-12-07 00:08:48,436 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:08:58,706 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:09:08,975 Sleeping for 5s. Reason: RUNNING
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2024-12-07 00:09:59,884 Sleeping for 6s. Reason: RUNNING
2024-12-07 00:10:06,166 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:10:14,435 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:10:24,722 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:10:34,986 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:10:45,278 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:10:50,690 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:10:57,963 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:11:08,236 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:11:17,497 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:11:22,766 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:11:32,033 Sleeping for 6s. Reason: RUNNING
2024-12-07 00:11:38,310 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:11:46,589 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:11:51,861 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:12:01,124 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:12:09,413 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:12:20,163 Sleeping for 8s. Reason: PENDING
2024-12-07 00:12:28,442 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:12:35,708 Sleeping for 6s. Reason: RUNNING
2024-12-07 00:12:41,996 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:12:50,269 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:12:59,541 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:13:06,812 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:13:14,103 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:13:23,368 Sleeping for 6s. Reason: RUNNING
2024-12-07 00:13:29,624 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:13:37,901 Sleeping for 6s. Reason: RUNNING
2024-12-07 00:13:44,167 Sleeping for 6s. Reason: RUNNING
2024-12-07 00:13:50,432 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:13:57,692 Sleeping for 6s. Reason: RUNNING
2024-12-07 00:14:03,952 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:14:09,216 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:14:16,470 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:14:26,741 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:14:36,013 Sleeping for 7s. Reason: RUNNING
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2024-12-07 00:15:20,340 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:15:30,601 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:15:35,867 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:15:45,497 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:15:54,763 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:16:00,033 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:16:05,300 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:16:10,578 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:16:17,850 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:16:28,108 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:16:33,365 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:16:42,636 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:16:50,900 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:17:01,176 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:17:06,438 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:17:14,707 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:17:19,973 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:17:27,236 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:17:32,514 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:17:42,781 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:17:51,040 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:18:00,301 Sleeping for 6s. Reason: RUNNING
2024-12-07 00:18:06,565 Sleeping for 6s. Reason: RUNNING
2024-12-07 00:18:12,831 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:18:20,104 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:18:28,376 Sleeping for 6s. Reason: RUNNING
2024-12-07 00:18:34,674 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:18:39,951 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:18:47,218 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:18:56,485 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:19:05,756 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:19:13,021 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:19:22,278 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:19:31,545 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:19:53,386 Setting max_seq=508, max_extra_seq=2048
2024-12-07 00:28:02,697 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=63.2 pTM=0.434 ipTM=0.217
2024-12-07 00:33:21,773 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=62.6 pTM=0.42 ipTM=0.236 tol=16
2024-12-07 00:38:40,858 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=62.3 pTM=0.416 ipTM=0.229 tol=14.3
2024-12-07 00:43:59,739 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=62.5 pTM=0.423 ipTM=0.228 tol=13.4
2024-12-07 00:49:18,511 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=57.2 pTM=0.421 ipTM=0.233 tol=35.1
2024-12-07 00:54:37,342 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=60.8 pTM=0.417 ipTM=0.232 tol=28
2024-12-07 00:59:56,127 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=62.2 pTM=0.418 ipTM=0.24 tol=15.7
2024-12-07 01:05:15,064 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=62.5 pTM=0.422 ipTM=0.233 tol=11.7
2024-12-07 01:10:34,023 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=62.5 pTM=0.419 ipTM=0.237 tol=10.3
2024-12-07 01:15:52,847 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=62.7 pTM=0.422 ipTM=0.231 tol=7.96
2024-12-07 01:21:11,643 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=63.1 pTM=0.419 ipTM=0.236 tol=7.02
2024-12-07 01:26:30,420 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63 pTM=0.421 ipTM=0.23 tol=9.27
2024-12-07 01:31:49,172 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=63.2 pTM=0.419 ipTM=0.234 tol=6.61
2024-12-07 01:37:07,905 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=63 pTM=0.421 ipTM=0.23 tol=7.82
2024-12-07 01:42:26,633 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=62.6 pTM=0.417 ipTM=0.234 tol=6.67
2024-12-07 01:47:45,553 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=62.4 pTM=0.418 ipTM=0.23 tol=8.66
2024-12-07 01:53:04,356 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=62.7 pTM=0.417 ipTM=0.23 tol=13.2
2024-12-07 01:58:23,188 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=62.3 pTM=0.416 ipTM=0.23 tol=9.57
2024-12-07 02:03:42,072 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=62.7 pTM=0.417 ipTM=0.233 tol=8.98
2024-12-07 02:09:00,983 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=62.5 pTM=0.418 ipTM=0.23 tol=10.4
2024-12-07 02:14:19,708 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=62.5 pTM=0.418 ipTM=0.242 tol=10.1
2024-12-07 02:19:38,592 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=62.6 pTM=0.415 ipTM=0.233 tol=9.52
2024-12-07 02:24:57,335 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=62.6 pTM=0.419 ipTM=0.237 tol=6.99
2024-12-07 02:30:16,142 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=62.6 pTM=0.417 ipTM=0.227 tol=7.06
2024-12-07 02:35:35,026 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=62.7 pTM=0.416 ipTM=0.233 tol=5.98
2024-12-07 02:40:53,735 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=62.8 pTM=0.42 ipTM=0.228 tol=5.04
2024-12-07 02:46:12,465 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=62.4 pTM=0.417 ipTM=0.236 tol=7.4
2024-12-07 02:51:31,246 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=62.2 pTM=0.415 ipTM=0.228 tol=6.61
2024-12-07 02:56:50,047 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=62.6 pTM=0.418 ipTM=0.234 tol=6.95
2024-12-07 03:02:08,790 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=62.4 pTM=0.42 ipTM=0.231 tol=7.61
2024-12-07 03:07:27,616 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=62.8 pTM=0.419 ipTM=0.233 tol=7.62
2024-12-07 03:07:27,619 alphafold2_multimer_v3_model_1_seed_000 took 10050.2s (30 recycles)
2024-12-07 03:12:50,631 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=60.6 pTM=0.43 ipTM=0.216
2024-12-07 03:18:09,898 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61.5 pTM=0.424 ipTM=0.224 tol=20.2
2024-12-07 03:23:29,370 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=62.2 pTM=0.42 ipTM=0.235 tol=25.7
2024-12-07 03:28:48,538 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.8 pTM=0.411 ipTM=0.224 tol=15.3
2024-12-07 03:34:07,770 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=61.1 pTM=0.412 ipTM=0.225 tol=10.5
2024-12-07 03:39:26,855 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.1 pTM=0.417 ipTM=0.225 tol=11.8
2024-12-07 03:44:46,188 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.1 pTM=0.416 ipTM=0.224 tol=8.86
2024-12-07 03:50:05,405 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=61.8 pTM=0.419 ipTM=0.222 tol=17
2024-12-07 03:55:24,807 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.3 pTM=0.413 ipTM=0.22 tol=14.6
2024-12-07 04:00:44,093 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=61.2 pTM=0.409 ipTM=0.219 tol=15.3
2024-12-07 04:06:03,457 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=60.8 pTM=0.409 ipTM=0.219 tol=22.8
2024-12-07 04:11:22,713 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.5 pTM=0.414 ipTM=0.221 tol=14.6
2024-12-07 04:16:41,871 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61 pTM=0.419 ipTM=0.224 tol=19.4
2024-12-07 04:22:00,978 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=61.1 pTM=0.415 ipTM=0.219 tol=17.7
2024-12-07 04:27:20,248 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=61 pTM=0.414 ipTM=0.22 tol=17.6
2024-12-07 04:32:39,507 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=60.4 pTM=0.416 ipTM=0.222 tol=23.6
2024-12-07 04:37:58,742 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=61.2 pTM=0.416 ipTM=0.22 tol=18
2024-12-07 04:43:17,922 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=61.2 pTM=0.415 ipTM=0.218 tol=17.4
2024-12-07 04:48:37,117 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61.4 pTM=0.416 ipTM=0.219 tol=21.3
2024-12-07 04:53:56,362 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=61.3 pTM=0.415 ipTM=0.222 tol=13.5
2024-12-07 04:59:15,738 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.1 pTM=0.42 ipTM=0.221 tol=14.4
2024-12-07 05:04:35,092 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=61.8 pTM=0.414 ipTM=0.221 tol=11.7
2024-12-07 05:09:54,416 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=61.6 pTM=0.411 ipTM=0.221 tol=12.4
2024-12-07 05:15:13,610 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.3 pTM=0.413 ipTM=0.223 tol=13.9
2024-12-07 05:20:32,976 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=61.6 pTM=0.412 ipTM=0.22 tol=17.5
2024-12-07 05:25:52,210 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=61.2 pTM=0.416 ipTM=0.224 tol=20.5
2024-12-07 05:31:11,413 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=61.5 pTM=0.414 ipTM=0.226 tol=21.5
2024-12-07 05:36:30,591 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=61.3 pTM=0.411 ipTM=0.223 tol=14.9
2024-12-07 05:41:49,925 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=60.9 pTM=0.412 ipTM=0.225 tol=18.2
2024-12-07 05:47:09,210 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=61.2 pTM=0.415 ipTM=0.222 tol=17.7
2024-12-07 05:52:28,530 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=61.9 pTM=0.418 ipTM=0.223 tol=14.4
2024-12-07 05:52:28,533 alphafold2_multimer_v3_model_2_seed_000 took 9897.2s (30 recycles)
2024-12-07 05:57:52,127 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=60.6 pTM=0.424 ipTM=0.211
2024-12-07 06:03:12,084 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=62.3 pTM=0.422 ipTM=0.226 tol=28.8
2024-12-07 06:08:32,178 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=61.3 pTM=0.418 ipTM=0.224 tol=21.2
2024-12-07 06:13:52,277 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.6 pTM=0.417 ipTM=0.222 tol=18.5
2024-12-07 06:19:12,224 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.3 pTM=0.417 ipTM=0.255 tol=27
2024-12-07 06:24:32,309 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61.3 pTM=0.416 ipTM=0.224 tol=19.4
2024-12-07 06:29:52,239 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61.5 pTM=0.417 ipTM=0.227 tol=16.2
2024-12-07 06:35:12,194 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=61.7 pTM=0.416 ipTM=0.227 tol=23.8
2024-12-07 06:40:32,291 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.6 pTM=0.415 ipTM=0.222 tol=21.4
2024-12-07 06:45:52,296 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62.4 pTM=0.416 ipTM=0.227 tol=18.1
2024-12-07 06:51:12,609 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=62.8 pTM=0.414 ipTM=0.218 tol=19.4
2024-12-07 06:56:32,873 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=63 pTM=0.414 ipTM=0.226 tol=14.9
2024-12-07 07:01:53,062 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.9 pTM=0.415 ipTM=0.226 tol=20
2024-12-07 07:07:13,236 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.8 pTM=0.415 ipTM=0.258 tol=19.5
2024-12-07 07:12:33,416 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=62.4 pTM=0.415 ipTM=0.222 tol=19
2024-12-07 07:17:53,477 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=63.2 pTM=0.415 ipTM=0.226 tol=15.4
2024-12-07 07:23:13,643 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=64.4 pTM=0.415 ipTM=0.224 tol=15.1
2024-12-07 07:28:33,705 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=63.6 pTM=0.415 ipTM=0.223 tol=17.1
2024-12-07 07:33:53,616 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63.1 pTM=0.416 ipTM=0.285 tol=16.6
2024-12-07 07:39:13,723 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.1 pTM=0.414 ipTM=0.229 tol=19.7
2024-12-07 07:44:34,000 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63.4 pTM=0.414 ipTM=0.219 tol=18.7
2024-12-07 07:49:54,252 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.8 pTM=0.413 ipTM=0.223 tol=19.6
2024-12-07 07:55:14,302 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=64.2 pTM=0.413 ipTM=0.234 tol=17.2
2024-12-07 08:00:34,065 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.9 pTM=0.414 ipTM=0.277 tol=17.5
2024-12-07 08:05:53,851 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63.4 pTM=0.415 ipTM=0.245 tol=12.9
2024-12-07 08:11:13,818 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63.6 pTM=0.413 ipTM=0.234 tol=9.96
2024-12-07 08:16:33,629 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=64.1 pTM=0.414 ipTM=0.356 tol=16.1
2024-12-07 08:21:53,509 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=64.1 pTM=0.413 ipTM=0.24 tol=11.8
2024-12-07 08:27:13,493 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=64.2 pTM=0.412 ipTM=0.239 tol=12.1
2024-12-07 08:32:33,398 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=64.1 pTM=0.413 ipTM=0.236 tol=12.5
2024-12-07 08:37:53,401 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64.4 pTM=0.413 ipTM=0.235 tol=8.36
2024-12-07 08:37:53,404 alphafold2_multimer_v3_model_3_seed_000 took 9921.2s (30 recycles)
2024-12-07 08:43:16,938 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=59 pTM=0.422 ipTM=0.264
2024-12-07 08:48:36,764 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=59.5 pTM=0.419 ipTM=0.469 tol=27.2
2024-12-07 08:53:56,408 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60.5 pTM=0.419 ipTM=0.573 tol=23.1
2024-12-07 08:59:16,205 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=61.2 pTM=0.418 ipTM=0.579 tol=16
2024-12-07 09:04:36,035 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=61.1 pTM=0.415 ipTM=0.619 tol=12.2
2024-12-07 09:09:55,849 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=61.9 pTM=0.417 ipTM=0.632 tol=10.1
2024-12-07 09:15:15,704 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=61.4 pTM=0.416 ipTM=0.644 tol=12.4
2024-12-07 09:20:35,522 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=61.8 pTM=0.417 ipTM=0.627 tol=11.3
2024-12-07 09:25:55,343 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=62.1 pTM=0.416 ipTM=0.656 tol=11.8
2024-12-07 09:31:15,075 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=62.1 pTM=0.417 ipTM=0.634 tol=12.5
2024-12-07 09:36:34,827 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=62.1 pTM=0.416 ipTM=0.647 tol=10.2
2024-12-07 09:41:54,578 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=61.9 pTM=0.417 ipTM=0.646 tol=9.87
2024-12-07 09:47:14,319 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=62.1 pTM=0.417 ipTM=0.645 tol=10.9
2024-12-07 09:52:33,996 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=61.4 pTM=0.416 ipTM=0.625 tol=9.28
2024-12-07 09:57:53,729 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=61.9 pTM=0.415 ipTM=0.638 tol=11.1
2024-12-07 10:03:13,540 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=61.3 pTM=0.417 ipTM=0.6 tol=11
2024-12-07 10:08:33,126 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=61.8 pTM=0.416 ipTM=0.636 tol=11.7
2024-12-07 10:13:52,715 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=62.1 pTM=0.416 ipTM=0.626 tol=11.6
2024-12-07 10:19:12,484 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=61.1 pTM=0.416 ipTM=0.6 tol=11
2024-12-07 10:24:32,169 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=61.8 pTM=0.417 ipTM=0.63 tol=13.4
2024-12-07 10:29:51,876 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=61.8 pTM=0.416 ipTM=0.638 tol=16.2
2024-12-07 10:35:11,362 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=61.7 pTM=0.417 ipTM=0.613 tol=14.2
2024-12-07 10:40:30,989 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=61.7 pTM=0.415 ipTM=0.643 tol=13.1
2024-12-07 10:45:50,646 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=61.9 pTM=0.416 ipTM=0.643 tol=12.3
2024-12-07 10:51:10,200 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=61.9 pTM=0.416 ipTM=0.645 tol=9.45
2024-12-07 10:56:29,844 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=61.5 pTM=0.416 ipTM=0.615 tol=12
2024-12-07 11:01:49,569 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=61.3 pTM=0.416 ipTM=0.624 tol=10.9
2024-12-07 11:07:09,286 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=61.4 pTM=0.418 ipTM=0.596 tol=10.1
2024-12-07 11:12:29,020 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=61.7 pTM=0.416 ipTM=0.605 tol=10.1
2024-12-07 11:17:48,684 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=61.8 pTM=0.417 ipTM=0.609 tol=12.9
2024-12-07 11:23:08,465 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=61.8 pTM=0.416 ipTM=0.626 tol=12
2024-12-07 11:23:08,468 alphafold2_multimer_v3_model_4_seed_000 took 9911.3s (30 recycles)
2024-12-07 11:28:31,901 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.2 pTM=0.426 ipTM=0.226
2024-12-07 11:33:51,762 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.4 pTM=0.429 ipTM=0.22 tol=25
2024-12-07 11:39:11,625 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=59.3 pTM=0.422 ipTM=0.22 tol=21.5
2024-12-07 11:44:31,649 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=59.1 pTM=0.42 ipTM=0.22 tol=23
2024-12-07 11:49:51,549 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=59.4 pTM=0.417 ipTM=0.225 tol=23.4
2024-12-07 11:55:11,457 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=60 pTM=0.414 ipTM=0.225 tol=22.5
2024-12-07 12:00:31,276 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=59.4 pTM=0.418 ipTM=0.239 tol=31.4
2024-12-07 12:05:51,170 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=59 pTM=0.418 ipTM=0.238 tol=23.9
2024-12-07 12:11:10,953 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=58.9 pTM=0.417 ipTM=0.242 tol=18.5
2024-12-07 12:16:30,794 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=59.4 pTM=0.416 ipTM=0.244 tol=23.8
2024-12-07 12:21:50,411 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=60 pTM=0.417 ipTM=0.234 tol=20.9
2024-12-07 12:27:10,294 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59.1 pTM=0.416 ipTM=0.232 tol=17.4
2024-12-07 12:32:30,066 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=59.5 pTM=0.416 ipTM=0.226 tol=15.9
2024-12-07 12:37:49,836 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=59.3 pTM=0.417 ipTM=0.229 tol=14
2024-12-07 12:43:09,542 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=60.2 pTM=0.415 ipTM=0.234 tol=24
2024-12-07 12:48:29,362 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=59.2 pTM=0.417 ipTM=0.233 tol=16.1
2024-12-07 12:53:49,172 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=59.6 pTM=0.415 ipTM=0.232 tol=15.9
2024-12-07 12:59:08,738 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=59.5 pTM=0.416 ipTM=0.233 tol=19.6
2024-12-07 13:04:28,458 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=59.7 pTM=0.415 ipTM=0.249 tol=18.4
2024-12-07 13:09:48,098 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=60.7 pTM=0.416 ipTM=0.254 tol=15.6
2024-12-07 13:15:07,798 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=60.2 pTM=0.414 ipTM=0.24 tol=13.6
2024-12-07 13:20:27,337 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=60.1 pTM=0.416 ipTM=0.245 tol=13
2024-12-07 13:25:46,871 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=60.2 pTM=0.416 ipTM=0.242 tol=18.6
2024-12-07 13:31:06,530 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=59.7 pTM=0.414 ipTM=0.238 tol=16.8
2024-12-07 13:36:26,358 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59.3 pTM=0.413 ipTM=0.239 tol=19.3
2024-12-07 13:41:46,159 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=59.6 pTM=0.414 ipTM=0.234 tol=14.4
2024-12-07 13:47:05,985 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=59.3 pTM=0.414 ipTM=0.252 tol=20.8
2024-12-07 13:52:25,673 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=59.7 pTM=0.415 ipTM=0.236 tol=20
2024-12-07 13:57:45,308 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=60 pTM=0.415 ipTM=0.235 tol=18
2024-12-07 14:03:04,953 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=60 pTM=0.416 ipTM=0.237 tol=19.5
2024-12-07 14:08:24,741 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59.3 pTM=0.414 ipTM=0.234 tol=12.6
2024-12-07 14:08:24,744 alphafold2_multimer_v3_model_5_seed_000 took 9912.6s (30 recycles)
2024-12-07 14:08:28,476 reranking models by 'multimer' metric
2024-12-07 14:08:32,480 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 14:19:57,549 Relaxation took 689.1s
2024-12-07 14:19:57,549 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=61.8 pTM=0.416 ipTM=0.626
2024-12-07 14:31:02,435 Relaxation took 664.9s
2024-12-07 14:31:02,435 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64.4 pTM=0.413 ipTM=0.235
2024-12-07 14:45:09,248 Relaxation took 846.8s
2024-12-07 14:45:09,249 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=62.8 pTM=0.419 ipTM=0.233
2024-12-07 14:56:34,286 Relaxation took 685.0s
2024-12-07 14:56:34,286 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59.3 pTM=0.414 ipTM=0.234
2024-12-07 15:12:02,190 Relaxation took 927.9s
2024-12-07 15:12:02,190 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=61.9 pTM=0.418 ipTM=0.223
2024-12-07 15:12:10,256 Done