2024-12-07 00:12:42,592 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 00:12:42,912 Running on GPU
2024-12-07 00:12:46,634 Found 6 citations for tools or databases
2024-12-07 00:12:46,635 Query 1/1: KLHL9_USP25 (length 1672)
2024-12-07 00:12:46,980 Sleeping for 6s. Reason: PENDING
2024-12-07 00:12:53,243 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:13:00,519 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:13:08,809 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:13:17,073 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:13:22,334 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:13:31,592 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:13:39,854 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:13:50,118 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:13:58,395 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:14:03,662 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:14:10,939 Sleeping for 6s. Reason: RUNNING
2024-12-07 00:14:17,203 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:14:22,472 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:14:32,740 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:14:41,007 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:14:51,266 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:15:00,537 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:15:05,808 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:15:16,082 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:15:23,348 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:15:30,601 Sleeping for 6s. Reason: RUNNING
2024-12-07 00:15:36,863 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:15:45,488 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:15:52,751 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:16:00,029 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:16:10,293 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:16:15,558 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:16:23,822 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:16:33,079 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:16:45,235 Sleeping for 5s. Reason: PENDING
2024-12-07 00:16:50,507 Sleeping for 6s. Reason: RUNNING
2024-12-07 00:16:56,788 Sleeping for 6s. Reason: RUNNING
2024-12-07 00:17:03,051 Sleeping for 6s. Reason: RUNNING
2024-12-07 00:17:09,313 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:17:19,588 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:17:29,849 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:17:39,135 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:17:44,405 Sleeping for 6s. Reason: RUNNING
2024-12-07 00:17:50,687 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:18:00,955 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:18:06,226 Sleeping for 6s. Reason: RUNNING
2024-12-07 00:18:12,501 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:18:19,762 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:18:25,029 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:18:35,292 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:18:45,555 Sleeping for 6s. Reason: RUNNING
2024-12-07 00:18:51,808 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:19:02,080 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:19:07,344 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:19:14,628 Sleeping for 7s. Reason: RUNNING
2024-12-07 00:19:21,886 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:19:32,670 Setting max_seq=508, max_extra_seq=2048
2024-12-07 00:22:58,465 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=71.3 pTM=0.413 ipTM=0.243
2024-12-07 00:24:26,505 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=72.2 pTM=0.441 ipTM=0.342 tol=12.9
2024-12-07 00:25:54,605 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=72.5 pTM=0.44 ipTM=0.361 tol=4.33
2024-12-07 00:27:22,675 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=72.4 pTM=0.444 ipTM=0.349 tol=3.23
2024-12-07 00:28:50,790 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.5 pTM=0.439 ipTM=0.381 tol=2.19
2024-12-07 00:30:18,892 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72.5 pTM=0.441 ipTM=0.368 tol=2.87
2024-12-07 00:31:46,951 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72.6 pTM=0.444 ipTM=0.334 tol=3.03
2024-12-07 00:33:15,004 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=72.5 pTM=0.444 ipTM=0.341 tol=1.65
2024-12-07 00:34:43,083 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.6 pTM=0.444 ipTM=0.349 tol=1.9
2024-12-07 00:36:11,140 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=72.6 pTM=0.44 ipTM=0.338 tol=3.07
2024-12-07 00:37:39,161 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=72.9 pTM=0.445 ipTM=0.273 tol=2.92
2024-12-07 00:39:07,238 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72.5 pTM=0.442 ipTM=0.277 tol=2.59
2024-12-07 00:40:35,257 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.4 pTM=0.442 ipTM=0.277 tol=2.01
2024-12-07 00:42:03,336 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=72.6 pTM=0.441 ipTM=0.261 tol=2.12
2024-12-07 00:43:31,381 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.6 pTM=0.445 ipTM=0.241 tol=2.55
2024-12-07 00:44:59,451 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72.6 pTM=0.441 ipTM=0.234 tol=2.24
2024-12-07 00:46:27,498 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=72.5 pTM=0.442 ipTM=0.235 tol=2.55
2024-12-07 00:47:55,553 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=72.6 pTM=0.441 ipTM=0.234 tol=2.76
2024-12-07 00:49:23,629 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.8 pTM=0.445 ipTM=0.238 tol=3.54
2024-12-07 00:50:51,679 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=72.3 pTM=0.442 ipTM=0.231 tol=3.83
2024-12-07 00:52:19,714 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=72.6 pTM=0.445 ipTM=0.233 tol=4.29
2024-12-07 00:53:47,759 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=72.4 pTM=0.444 ipTM=0.23 tol=3.61
2024-12-07 00:55:15,787 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=72.6 pTM=0.447 ipTM=0.235 tol=2.46
2024-12-07 00:56:43,807 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=72.6 pTM=0.446 ipTM=0.231 tol=2.58
2024-12-07 00:58:11,807 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=72.6 pTM=0.448 ipTM=0.24 tol=2.48
2024-12-07 00:59:39,822 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=72.7 pTM=0.446 ipTM=0.233 tol=2.84
2024-12-07 01:01:07,840 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=72.8 pTM=0.449 ipTM=0.241 tol=2.92
2024-12-07 01:02:35,908 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=72.8 pTM=0.447 ipTM=0.233 tol=2.76
2024-12-07 01:04:03,971 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.9 pTM=0.448 ipTM=0.237 tol=2.38
2024-12-07 01:05:32,061 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72.8 pTM=0.449 ipTM=0.237 tol=2.97
2024-12-07 01:07:00,070 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.9 pTM=0.452 ipTM=0.247 tol=3
2024-12-07 01:07:00,071 alphafold2_multimer_v3_model_1_seed_000 took 2842.4s (30 recycles)
2024-12-07 01:08:30,163 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=72.8 pTM=0.415 ipTM=0.175
2024-12-07 01:09:58,441 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=74.1 pTM=0.423 ipTM=0.185 tol=8.75
2024-12-07 01:11:26,734 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=74.9 pTM=0.427 ipTM=0.19 tol=7.23
2024-12-07 01:12:55,062 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=74.9 pTM=0.429 ipTM=0.19 tol=4.42
2024-12-07 01:14:23,361 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=74.9 pTM=0.43 ipTM=0.191 tol=3.44
2024-12-07 01:15:51,668 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=75.1 pTM=0.431 ipTM=0.194 tol=2.41
2024-12-07 01:17:19,922 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=74.9 pTM=0.436 ipTM=0.203 tol=2.02
2024-12-07 01:18:48,220 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=75 pTM=0.439 ipTM=0.207 tol=3.5
2024-12-07 01:20:16,531 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=75.2 pTM=0.436 ipTM=0.206 tol=1.35
2024-12-07 01:21:44,837 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=75.4 pTM=0.437 ipTM=0.207 tol=2.08
2024-12-07 01:23:13,084 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=75.3 pTM=0.438 ipTM=0.207 tol=2.09
2024-12-07 01:24:41,341 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=75.1 pTM=0.435 ipTM=0.204 tol=1.08
2024-12-07 01:26:09,617 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=75.1 pTM=0.434 ipTM=0.203 tol=1.18
2024-12-07 01:27:37,907 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=75.1 pTM=0.434 ipTM=0.201 tol=0.762
2024-12-07 01:29:06,172 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=75.2 pTM=0.439 ipTM=0.207 tol=0.701
2024-12-07 01:30:34,440 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=75.3 pTM=0.437 ipTM=0.208 tol=2.02
2024-12-07 01:32:02,713 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=75.2 pTM=0.437 ipTM=0.207 tol=1.99
2024-12-07 01:33:30,974 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=75.4 pTM=0.437 ipTM=0.208 tol=1.25
2024-12-07 01:34:59,268 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=75.2 pTM=0.437 ipTM=0.205 tol=1.09
2024-12-07 01:36:27,551 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=75.2 pTM=0.433 ipTM=0.201 tol=0.889
2024-12-07 01:37:55,841 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=75.2 pTM=0.436 ipTM=0.202 tol=0.978
2024-12-07 01:39:24,115 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=75.2 pTM=0.435 ipTM=0.2 tol=3.17
2024-12-07 01:40:52,398 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=75.2 pTM=0.436 ipTM=0.204 tol=3.04
2024-12-07 01:42:20,695 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=75.2 pTM=0.436 ipTM=0.202 tol=1.58
2024-12-07 01:43:48,981 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=75.3 pTM=0.436 ipTM=0.204 tol=1.45
2024-12-07 01:45:17,260 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=75.3 pTM=0.435 ipTM=0.204 tol=1.09
2024-12-07 01:46:45,515 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=75.4 pTM=0.436 ipTM=0.205 tol=2.21
2024-12-07 01:48:13,785 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=75.3 pTM=0.436 ipTM=0.206 tol=1.95
2024-12-07 01:49:42,041 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=75.3 pTM=0.438 ipTM=0.204 tol=1.24
2024-12-07 01:51:10,302 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=75.5 pTM=0.437 ipTM=0.21 tol=2.64
2024-12-07 01:52:38,566 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=75.6 pTM=0.438 ipTM=0.207 tol=2.18
2024-12-07 01:52:38,568 alphafold2_multimer_v3_model_2_seed_000 took 2736.8s (30 recycles)
2024-12-07 01:54:08,510 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=72.3 pTM=0.432 ipTM=0.318
2024-12-07 01:55:36,706 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=73.7 pTM=0.446 ipTM=0.335 tol=8.45
2024-12-07 01:57:04,945 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=73.6 pTM=0.439 ipTM=0.304 tol=3.47
2024-12-07 01:58:33,217 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=73.4 pTM=0.443 ipTM=0.306 tol=3.88
2024-12-07 02:00:01,498 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=73.6 pTM=0.442 ipTM=0.328 tol=4
2024-12-07 02:01:29,735 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=73.5 pTM=0.443 ipTM=0.307 tol=1.94
2024-12-07 02:02:57,933 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=73.4 pTM=0.443 ipTM=0.301 tol=2.05
2024-12-07 02:04:26,117 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=73.3 pTM=0.444 ipTM=0.288 tol=2.55
2024-12-07 02:05:54,353 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=73.8 pTM=0.444 ipTM=0.286 tol=2.32
2024-12-07 02:07:22,577 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=73.5 pTM=0.444 ipTM=0.278 tol=1.46
2024-12-07 02:08:50,792 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=73.8 pTM=0.446 ipTM=0.272 tol=1.62
2024-12-07 02:10:19,014 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=73.4 pTM=0.447 ipTM=0.3 tol=1.61
2024-12-07 02:11:47,225 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=73.5 pTM=0.443 ipTM=0.252 tol=1.39
2024-12-07 02:13:15,448 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=73.2 pTM=0.443 ipTM=0.24 tol=2.53
2024-12-07 02:14:43,702 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=73.5 pTM=0.444 ipTM=0.222 tol=2.54
2024-12-07 02:16:11,971 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=73.4 pTM=0.441 ipTM=0.214 tol=1.67
2024-12-07 02:17:40,205 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=73.7 pTM=0.444 ipTM=0.203 tol=1.55
2024-12-07 02:19:08,417 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=73.4 pTM=0.439 ipTM=0.201 tol=2.3
2024-12-07 02:20:36,705 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=73.8 pTM=0.443 ipTM=0.203 tol=2.02
2024-12-07 02:22:04,966 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=73.5 pTM=0.44 ipTM=0.202 tol=2.93
2024-12-07 02:23:33,212 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=73.6 pTM=0.445 ipTM=0.21 tol=2.19
2024-12-07 02:25:01,487 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=73.4 pTM=0.439 ipTM=0.2 tol=2.22
2024-12-07 02:26:29,764 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=73.8 pTM=0.444 ipTM=0.203 tol=2.29
2024-12-07 02:27:58,020 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=73.4 pTM=0.442 ipTM=0.204 tol=2.53
2024-12-07 02:29:26,289 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=73.6 pTM=0.442 ipTM=0.201 tol=2.33
2024-12-07 02:30:54,534 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=73.6 pTM=0.443 ipTM=0.204 tol=2.29
2024-12-07 02:32:22,767 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=73.6 pTM=0.442 ipTM=0.202 tol=1.33
2024-12-07 02:33:51,032 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=73.6 pTM=0.442 ipTM=0.201 tol=1.38
2024-12-07 02:35:19,279 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=73.6 pTM=0.442 ipTM=0.204 tol=1.55
2024-12-07 02:36:47,525 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=73.5 pTM=0.443 ipTM=0.207 tol=1.81
2024-12-07 02:38:15,767 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=73.8 pTM=0.445 ipTM=0.211 tol=1.86
2024-12-07 02:38:15,769 alphafold2_multimer_v3_model_3_seed_000 took 2735.5s (30 recycles)
2024-12-07 02:39:45,863 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=73 pTM=0.428 ipTM=0.2
2024-12-07 02:41:14,246 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=71.8 pTM=0.432 ipTM=0.177 tol=15.5
2024-12-07 02:42:42,517 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=72.9 pTM=0.452 ipTM=0.252 tol=10.6
2024-12-07 02:44:10,883 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=72.9 pTM=0.44 ipTM=0.195 tol=5.66
2024-12-07 02:45:39,335 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=73.1 pTM=0.44 ipTM=0.192 tol=5.7
2024-12-07 02:47:07,783 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=72.9 pTM=0.439 ipTM=0.189 tol=2.29
2024-12-07 02:48:36,167 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=72.8 pTM=0.442 ipTM=0.194 tol=2.46
2024-12-07 02:50:04,569 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=72.9 pTM=0.442 ipTM=0.194 tol=2.38
2024-12-07 02:51:32,950 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=73 pTM=0.443 ipTM=0.194 tol=3.28
2024-12-07 02:53:01,366 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=72.8 pTM=0.441 ipTM=0.191 tol=1.99
2024-12-07 02:54:29,780 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=73 pTM=0.445 ipTM=0.197 tol=1.57
2024-12-07 02:55:58,210 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=72.9 pTM=0.442 ipTM=0.193 tol=1.93
2024-12-07 02:57:26,641 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=72.9 pTM=0.443 ipTM=0.193 tol=2.26
2024-12-07 02:58:55,068 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=72.8 pTM=0.441 ipTM=0.192 tol=2.63
2024-12-07 03:00:23,482 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=72.8 pTM=0.443 ipTM=0.193 tol=1.42
2024-12-07 03:01:51,902 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=73 pTM=0.443 ipTM=0.194 tol=1.45
2024-12-07 03:03:20,303 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=72.8 pTM=0.445 ipTM=0.197 tol=2.94
2024-12-07 03:04:48,693 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=73.1 pTM=0.442 ipTM=0.194 tol=2.94
2024-12-07 03:06:17,101 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=73.1 pTM=0.445 ipTM=0.196 tol=1.35
2024-12-07 03:07:45,478 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=73 pTM=0.442 ipTM=0.195 tol=1.17
2024-12-07 03:09:13,890 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=73.1 pTM=0.445 ipTM=0.196 tol=1.31
2024-12-07 03:10:42,285 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=72.9 pTM=0.443 ipTM=0.194 tol=2.66
2024-12-07 03:12:10,702 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=72.9 pTM=0.444 ipTM=0.194 tol=1.25
2024-12-07 03:13:39,099 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=73 pTM=0.444 ipTM=0.196 tol=1.72
2024-12-07 03:15:07,490 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=72.8 pTM=0.443 ipTM=0.194 tol=2.98
2024-12-07 03:16:35,877 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=73 pTM=0.442 ipTM=0.194 tol=2.94
2024-12-07 03:18:04,268 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=73 pTM=0.444 ipTM=0.196 tol=2.4
2024-12-07 03:19:32,673 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=73.2 pTM=0.441 ipTM=0.193 tol=2.2
2024-12-07 03:21:01,088 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=73.2 pTM=0.444 ipTM=0.196 tol=2.6
2024-12-07 03:22:29,476 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=73.1 pTM=0.443 ipTM=0.194 tol=1.37
2024-12-07 03:23:57,867 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=73.3 pTM=0.444 ipTM=0.195 tol=1.26
2024-12-07 03:23:57,869 alphafold2_multimer_v3_model_4_seed_000 took 2740.4s (30 recycles)
2024-12-07 03:25:27,709 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=70.9 pTM=0.447 ipTM=0.218
2024-12-07 03:26:55,923 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.9 pTM=0.443 ipTM=0.203 tol=11.6
2024-12-07 03:28:24,163 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=73.2 pTM=0.446 ipTM=0.202 tol=5.7
2024-12-07 03:29:52,394 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=73.6 pTM=0.448 ipTM=0.208 tol=4.34
2024-12-07 03:31:20,632 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=73.4 pTM=0.448 ipTM=0.207 tol=4
2024-12-07 03:32:48,861 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=73.6 pTM=0.447 ipTM=0.207 tol=2.34
2024-12-07 03:34:17,029 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=73.4 pTM=0.449 ipTM=0.212 tol=2.14
2024-12-07 03:35:45,162 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=73.5 pTM=0.453 ipTM=0.217 tol=2.3
2024-12-07 03:37:13,381 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=73.9 pTM=0.45 ipTM=0.211 tol=2.22
2024-12-07 03:38:41,567 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=73.6 pTM=0.451 ipTM=0.212 tol=2.35
2024-12-07 03:40:09,761 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=73.6 pTM=0.45 ipTM=0.21 tol=1.45
2024-12-07 03:41:37,969 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=73.5 pTM=0.45 ipTM=0.211 tol=2.38
2024-12-07 03:43:06,148 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=73.4 pTM=0.447 ipTM=0.205 tol=1.76
2024-12-07 03:44:34,317 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=73.2 pTM=0.446 ipTM=0.207 tol=1.5
2024-12-07 03:46:02,492 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=73.4 pTM=0.452 ipTM=0.213 tol=1.54
2024-12-07 03:47:30,685 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=73.5 pTM=0.449 ipTM=0.209 tol=1.94
2024-12-07 03:48:58,908 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=73.6 pTM=0.448 ipTM=0.208 tol=1.81
2024-12-07 03:50:27,083 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=73.6 pTM=0.449 ipTM=0.21 tol=1.86
2024-12-07 03:51:55,268 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=73.6 pTM=0.449 ipTM=0.209 tol=2.73
2024-12-07 03:53:23,460 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=73.6 pTM=0.447 ipTM=0.206 tol=1.88
2024-12-07 03:54:51,627 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=73.6 pTM=0.452 ipTM=0.214 tol=2.08
2024-12-07 03:56:19,804 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=73.5 pTM=0.449 ipTM=0.208 tol=1.77
2024-12-07 03:57:48,024 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=73.6 pTM=0.45 ipTM=0.211 tol=1.67
2024-12-07 03:59:16,223 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=73.6 pTM=0.451 ipTM=0.21 tol=2.06
2024-12-07 04:00:44,383 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=73.5 pTM=0.45 ipTM=0.211 tol=1.3
2024-12-07 04:02:12,565 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=73.7 pTM=0.45 ipTM=0.211 tol=1.2
2024-12-07 04:03:40,750 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=73.6 pTM=0.451 ipTM=0.212 tol=1.41
2024-12-07 04:05:08,955 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=73.6 pTM=0.449 ipTM=0.209 tol=1.79
2024-12-07 04:06:37,123 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=73.4 pTM=0.451 ipTM=0.213 tol=1.73
2024-12-07 04:08:05,263 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=73.7 pTM=0.452 ipTM=0.215 tol=1.67
2024-12-07 04:09:33,442 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=73.6 pTM=0.451 ipTM=0.212 tol=1.68
2024-12-07 04:09:33,444 alphafold2_multimer_v3_model_5_seed_000 took 2733.9s (30 recycles)
2024-12-07 04:09:35,073 reranking models by 'multimer' metric
2024-12-07 04:09:38,918 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 04:13:16,724 Relaxation took 221.7s
2024-12-07 04:13:16,725 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.9 pTM=0.452 ipTM=0.247
2024-12-07 04:15:41,314 Relaxation took 144.6s
2024-12-07 04:15:41,314 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=73.6 pTM=0.451 ipTM=0.212
2024-12-07 04:19:57,435 Relaxation took 256.1s
2024-12-07 04:19:57,435 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=73.8 pTM=0.445 ipTM=0.211
2024-12-07 04:23:33,158 Relaxation took 215.7s
2024-12-07 04:23:33,158 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=75.6 pTM=0.438 ipTM=0.207
2024-12-07 04:28:38,989 Relaxation took 305.8s
2024-12-07 04:28:38,989 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=73.3 pTM=0.444 ipTM=0.195
2024-12-07 04:28:42,878 Done