2024-12-07 00:16:52,426 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 00:16:52,774 Running on GPU
2024-12-07 00:16:56,476 Found 6 citations for tools or databases
2024-12-07 00:16:56,476 Query 1/1: LITAF_R3HDM1 (length 1260)
2024-12-07 00:16:56,758 Sleeping for 10s. Reason: PENDING
2024-12-07 00:17:07,023 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:17:12,298 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:17:20,567 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:17:29,833 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:17:35,098 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:17:43,361 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:17:53,623 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:18:01,947 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:18:11,234 Sleeping for 6s. Reason: RUNNING
2024-12-07 00:18:20,097 Sleeping for 10s. Reason: PENDING
2024-12-07 00:18:30,369 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:18:38,643 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:18:48,912 Sleeping for 6s. Reason: RUNNING
2024-12-07 00:18:55,182 Sleeping for 8s. Reason: RUNNING
2024-12-07 00:19:03,459 Sleeping for 5s. Reason: RUNNING
2024-12-07 00:19:08,722 Sleeping for 9s. Reason: RUNNING
2024-12-07 00:19:17,995 Sleeping for 10s. Reason: RUNNING
2024-12-07 00:19:31,080 Setting max_seq=508, max_extra_seq=2048
2024-12-07 00:22:54,739 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=32.2 pTM=0.221 ipTM=0.156
2024-12-07 00:23:36,435 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=32.3 pTM=0.22 ipTM=0.171 tol=29
2024-12-07 00:24:18,306 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=32.6 pTM=0.219 ipTM=0.174 tol=16.6
2024-12-07 00:25:00,268 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=32.6 pTM=0.219 ipTM=0.171 tol=9.55
2024-12-07 00:25:42,286 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=32.6 pTM=0.219 ipTM=0.172 tol=10.1
2024-12-07 00:26:24,328 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=32.8 pTM=0.219 ipTM=0.176 tol=7.2
2024-12-07 00:27:06,378 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=32.8 pTM=0.219 ipTM=0.174 tol=5.92
2024-12-07 00:27:48,463 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=32.6 pTM=0.219 ipTM=0.174 tol=5.02
2024-12-07 00:28:30,544 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=32.8 pTM=0.218 ipTM=0.176 tol=5.32
2024-12-07 00:29:12,627 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=32.6 pTM=0.218 ipTM=0.178 tol=5.72
2024-12-07 00:29:54,708 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=33 pTM=0.217 ipTM=0.176 tol=13.1
2024-12-07 00:30:36,806 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=32.8 pTM=0.216 ipTM=0.176 tol=13.1
2024-12-07 00:31:18,889 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=32.6 pTM=0.217 ipTM=0.182 tol=7.89
2024-12-07 00:32:00,987 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=32.5 pTM=0.217 ipTM=0.182 tol=7.72
2024-12-07 00:32:43,093 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=32.7 pTM=0.218 ipTM=0.18 tol=8.02
2024-12-07 00:33:25,158 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=32.4 pTM=0.218 ipTM=0.179 tol=7.51
2024-12-07 00:34:07,221 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=32.8 pTM=0.218 ipTM=0.179 tol=18
2024-12-07 00:34:49,315 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=32.8 pTM=0.218 ipTM=0.178 tol=13.7
2024-12-07 00:35:31,394 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=32.8 pTM=0.218 ipTM=0.179 tol=8.03
2024-12-07 00:36:13,484 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=32.6 pTM=0.218 ipTM=0.179 tol=5.33
2024-12-07 00:36:55,576 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=32.7 pTM=0.218 ipTM=0.178 tol=4.9
2024-12-07 00:37:37,649 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=32.8 pTM=0.217 ipTM=0.177 tol=6.56
2024-12-07 00:38:19,738 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=33 pTM=0.217 ipTM=0.176 tol=7.89
2024-12-07 00:39:01,905 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=32.9 pTM=0.217 ipTM=0.176 tol=6.46
2024-12-07 00:39:44,200 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=33 pTM=0.217 ipTM=0.178 tol=7.02
2024-12-07 00:40:26,457 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=33.2 pTM=0.218 ipTM=0.179 tol=6.93
2024-12-07 00:41:08,626 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=33.2 pTM=0.218 ipTM=0.177 tol=6.61
2024-12-07 00:41:50,749 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=33.2 pTM=0.218 ipTM=0.178 tol=5.87
2024-12-07 00:42:32,814 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=33.1 pTM=0.217 ipTM=0.18 tol=4.45
2024-12-07 00:43:14,867 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=33 pTM=0.219 ipTM=0.179 tol=4.44
2024-12-07 00:43:56,906 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=33.2 pTM=0.219 ipTM=0.177 tol=5.61
2024-12-07 00:43:56,907 alphafold2_multimer_v3_model_1_seed_000 took 1459.2s (30 recycles)
2024-12-07 00:44:40,117 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=31.6 pTM=0.218 ipTM=0.196
2024-12-07 00:45:22,197 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=33.2 pTM=0.215 ipTM=0.207 tol=18
2024-12-07 00:46:04,313 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=33.6 pTM=0.215 ipTM=0.19 tol=15.7
2024-12-07 00:46:46,465 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=33.4 pTM=0.214 ipTM=0.183 tol=11.1
2024-12-07 00:47:28,577 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=33.8 pTM=0.215 ipTM=0.184 tol=10.3
2024-12-07 00:48:10,694 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=33.9 pTM=0.212 ipTM=0.182 tol=10.6
2024-12-07 00:48:52,788 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=34 pTM=0.213 ipTM=0.181 tol=6.82
2024-12-07 00:49:34,886 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=33.9 pTM=0.215 ipTM=0.177 tol=8.21
2024-12-07 00:50:16,986 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=33.9 pTM=0.215 ipTM=0.183 tol=9.77
2024-12-07 00:50:59,054 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=34.1 pTM=0.217 ipTM=0.182 tol=8.3
2024-12-07 00:51:41,155 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=34.2 pTM=0.215 ipTM=0.185 tol=7.54
2024-12-07 00:52:23,252 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=34.2 pTM=0.217 ipTM=0.187 tol=6.48
2024-12-07 00:53:05,355 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=34.2 pTM=0.215 ipTM=0.185 tol=9.44
2024-12-07 00:53:47,444 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=34.3 pTM=0.216 ipTM=0.186 tol=8.73
2024-12-07 00:54:29,534 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=34.2 pTM=0.216 ipTM=0.184 tol=6.59
2024-12-07 00:55:11,607 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=34.2 pTM=0.216 ipTM=0.186 tol=7.46
2024-12-07 00:55:53,722 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=34.4 pTM=0.217 ipTM=0.185 tol=7.11
2024-12-07 00:56:35,787 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=34.4 pTM=0.215 ipTM=0.183 tol=7.1
2024-12-07 00:57:17,857 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=34.6 pTM=0.216 ipTM=0.183 tol=8.15
2024-12-07 00:57:59,908 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=34.3 pTM=0.215 ipTM=0.184 tol=8.35
2024-12-07 00:58:41,979 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=34.5 pTM=0.217 ipTM=0.186 tol=8.03
2024-12-07 00:59:24,041 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=34.5 pTM=0.216 ipTM=0.186 tol=7.32
2024-12-07 01:00:06,094 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=34.4 pTM=0.217 ipTM=0.187 tol=7.52
2024-12-07 01:00:48,161 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=34.3 pTM=0.215 ipTM=0.186 tol=8.16
2024-12-07 01:01:30,221 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=34.4 pTM=0.217 ipTM=0.188 tol=6.61
2024-12-07 01:02:12,266 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=34.4 pTM=0.217 ipTM=0.188 tol=5.7
2024-12-07 01:02:54,323 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=34.6 pTM=0.218 ipTM=0.186 tol=6.45
2024-12-07 01:03:36,367 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=34.6 pTM=0.216 ipTM=0.189 tol=5.93
2024-12-07 01:04:18,429 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=34.3 pTM=0.219 ipTM=0.186 tol=6.06
2024-12-07 01:05:00,479 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=34.2 pTM=0.217 ipTM=0.185 tol=7.41
2024-12-07 01:05:42,548 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=34.4 pTM=0.218 ipTM=0.186 tol=6.27
2024-12-07 01:05:42,549 alphafold2_multimer_v3_model_2_seed_000 took 1304.4s (30 recycles)
2024-12-07 01:06:25,895 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=31.4 pTM=0.211 ipTM=0.178
2024-12-07 01:07:08,136 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=32.3 pTM=0.211 ipTM=0.231 tol=24.7
2024-12-07 01:07:50,407 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=32.2 pTM=0.213 ipTM=0.197 tol=14.1
2024-12-07 01:08:32,719 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=32.2 pTM=0.213 ipTM=0.19 tol=14.1
2024-12-07 01:09:15,012 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=32.9 pTM=0.214 ipTM=0.242 tol=9.17
2024-12-07 01:09:57,344 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=32.7 pTM=0.214 ipTM=0.202 tol=5.08
2024-12-07 01:10:39,665 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=32.7 pTM=0.214 ipTM=0.223 tol=5.93
2024-12-07 01:11:21,980 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=32.5 pTM=0.214 ipTM=0.199 tol=4.69
2024-12-07 01:12:04,314 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=32.9 pTM=0.214 ipTM=0.238 tol=5.4
2024-12-07 01:12:46,672 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=32.6 pTM=0.215 ipTM=0.194 tol=4.84
2024-12-07 01:13:29,026 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=32.8 pTM=0.213 ipTM=0.198 tol=6.36
2024-12-07 01:14:11,394 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=32.8 pTM=0.213 ipTM=0.205 tol=3.54
2024-12-07 01:14:53,751 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=32.6 pTM=0.213 ipTM=0.219 tol=3.92
2024-12-07 01:15:36,095 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=32.5 pTM=0.214 ipTM=0.193 tol=3.83
2024-12-07 01:16:18,439 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=32.6 pTM=0.214 ipTM=0.228 tol=4.67
2024-12-07 01:17:00,793 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=32.4 pTM=0.214 ipTM=0.196 tol=3.83
2024-12-07 01:17:43,152 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=32.8 pTM=0.213 ipTM=0.25 tol=4.98
2024-12-07 01:18:25,515 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=32.6 pTM=0.213 ipTM=0.19 tol=4.49
2024-12-07 01:19:07,867 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=32.8 pTM=0.214 ipTM=0.233 tol=5.5
2024-12-07 01:19:50,212 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=32.5 pTM=0.214 ipTM=0.2 tol=5.51
2024-12-07 01:20:32,547 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=32.7 pTM=0.214 ipTM=0.223 tol=6.27
2024-12-07 01:21:14,905 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=32.7 pTM=0.214 ipTM=0.192 tol=6.96
2024-12-07 01:21:57,267 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=32.8 pTM=0.214 ipTM=0.245 tol=5.6
2024-12-07 01:22:39,644 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=32.6 pTM=0.214 ipTM=0.201 tol=6.41
2024-12-07 01:23:22,019 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=32.8 pTM=0.213 ipTM=0.214 tol=3.62
2024-12-07 01:24:04,372 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=32.7 pTM=0.214 ipTM=0.19 tol=3.66
2024-12-07 01:24:46,718 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=32.9 pTM=0.213 ipTM=0.234 tol=3.21
2024-12-07 01:25:29,077 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=32.7 pTM=0.214 ipTM=0.195 tol=2.92
2024-12-07 01:26:11,424 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=32.7 pTM=0.214 ipTM=0.22 tol=3.43
2024-12-07 01:26:53,782 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=32.7 pTM=0.214 ipTM=0.189 tol=4.15
2024-12-07 01:27:36,124 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=33.1 pTM=0.213 ipTM=0.251 tol=2.67
2024-12-07 01:27:36,125 alphafold2_multimer_v3_model_3_seed_000 took 1312.3s (30 recycles)
2024-12-07 01:28:19,520 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=29.9 pTM=0.206 ipTM=0.166
2024-12-07 01:29:01,879 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=31.5 pTM=0.206 ipTM=0.165 tol=30
2024-12-07 01:29:44,297 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=32.3 pTM=0.208 ipTM=0.168 tol=22
2024-12-07 01:30:26,761 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=32.5 pTM=0.207 ipTM=0.167 tol=12
2024-12-07 01:31:09,254 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=32.6 pTM=0.208 ipTM=0.167 tol=10.5
2024-12-07 01:31:51,667 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=32.3 pTM=0.208 ipTM=0.168 tol=16.1
2024-12-07 01:32:34,055 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=32.6 pTM=0.209 ipTM=0.168 tol=12.4
2024-12-07 01:33:16,529 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=32.5 pTM=0.208 ipTM=0.173 tol=14.2
2024-12-07 01:33:58,966 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=32.6 pTM=0.209 ipTM=0.172 tol=15.3
2024-12-07 01:34:41,429 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=32.6 pTM=0.209 ipTM=0.174 tol=8.61
2024-12-07 01:35:23,864 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=32.7 pTM=0.209 ipTM=0.174 tol=6.73
2024-12-07 01:36:06,259 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=32.5 pTM=0.208 ipTM=0.173 tol=18.3
2024-12-07 01:36:48,662 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=32.5 pTM=0.208 ipTM=0.172 tol=15.4
2024-12-07 01:37:31,021 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=32.4 pTM=0.209 ipTM=0.173 tol=10.1
2024-12-07 01:38:13,403 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=32.5 pTM=0.208 ipTM=0.173 tol=7.59
2024-12-07 01:38:55,781 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=32.5 pTM=0.208 ipTM=0.173 tol=6.39
2024-12-07 01:39:38,171 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=32.5 pTM=0.209 ipTM=0.173 tol=6.35
2024-12-07 01:40:20,556 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=32.6 pTM=0.208 ipTM=0.172 tol=12.4
2024-12-07 01:41:02,962 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=32.5 pTM=0.208 ipTM=0.172 tol=12.8
2024-12-07 01:41:45,345 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=32.6 pTM=0.208 ipTM=0.173 tol=8.32
2024-12-07 01:42:27,734 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=32.6 pTM=0.208 ipTM=0.174 tol=7.41
2024-12-07 01:43:10,096 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=32.5 pTM=0.208 ipTM=0.174 tol=15
2024-12-07 01:43:52,482 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=32.8 pTM=0.208 ipTM=0.171 tol=13.9
2024-12-07 01:44:34,829 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=32.7 pTM=0.208 ipTM=0.173 tol=7.63
2024-12-07 01:45:17,203 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=32.8 pTM=0.208 ipTM=0.174 tol=7.14
2024-12-07 01:45:59,570 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=32.9 pTM=0.208 ipTM=0.172 tol=9.56
2024-12-07 01:46:41,925 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=32.9 pTM=0.208 ipTM=0.172 tol=6.14
2024-12-07 01:47:24,272 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=32.8 pTM=0.208 ipTM=0.172 tol=6.86
2024-12-07 01:48:06,633 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=32.7 pTM=0.208 ipTM=0.172 tol=6.54
2024-12-07 01:48:48,994 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=32.8 pTM=0.208 ipTM=0.175 tol=11.4
2024-12-07 01:49:31,359 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=32.8 pTM=0.208 ipTM=0.173 tol=11.3
2024-12-07 01:49:31,360 alphafold2_multimer_v3_model_4_seed_000 took 1314.0s (30 recycles)
2024-12-07 01:50:14,921 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=30.9 pTM=0.206 ipTM=0.16
2024-12-07 01:50:57,393 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=33.2 pTM=0.207 ipTM=0.163 tol=22.8
2024-12-07 01:51:39,902 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=33.8 pTM=0.207 ipTM=0.163 tol=20.2
2024-12-07 01:52:22,489 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=33.7 pTM=0.206 ipTM=0.158 tol=12.4
2024-12-07 01:53:05,001 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=34 pTM=0.208 ipTM=0.158 tol=16.5
2024-12-07 01:53:47,517 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=34.1 pTM=0.208 ipTM=0.158 tol=15
2024-12-07 01:54:30,015 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=34 pTM=0.209 ipTM=0.157 tol=8.76
2024-12-07 01:55:12,510 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=34 pTM=0.21 ipTM=0.16 tol=14
2024-12-07 01:55:55,020 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=34.1 pTM=0.209 ipTM=0.158 tol=7.97
2024-12-07 01:56:37,549 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=33.9 pTM=0.209 ipTM=0.16 tol=4.82
2024-12-07 01:57:20,058 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=34.2 pTM=0.208 ipTM=0.157 tol=5.63
2024-12-07 01:58:02,565 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=34.1 pTM=0.209 ipTM=0.158 tol=5.31
2024-12-07 01:58:45,076 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=34 pTM=0.208 ipTM=0.16 tol=12.2
2024-12-07 01:59:27,594 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=34.1 pTM=0.209 ipTM=0.161 tol=7.64
2024-12-07 02:00:10,108 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=33.9 pTM=0.208 ipTM=0.163 tol=6.77
2024-12-07 02:00:52,617 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=34.1 pTM=0.209 ipTM=0.16 tol=5.86
2024-12-07 02:01:35,116 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=33.9 pTM=0.211 ipTM=0.166 tol=6.1
2024-12-07 02:02:17,621 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=33.9 pTM=0.21 ipTM=0.159 tol=9.79
2024-12-07 02:03:00,147 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=33.9 pTM=0.209 ipTM=0.158 tol=8.64
2024-12-07 02:03:42,661 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=34 pTM=0.211 ipTM=0.159 tol=5.59
2024-12-07 02:04:25,148 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=34.1 pTM=0.215 ipTM=0.16 tol=11.6
2024-12-07 02:05:07,605 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=34 pTM=0.212 ipTM=0.16 tol=7.51
2024-12-07 02:05:50,053 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=34 pTM=0.216 ipTM=0.163 tol=8.84
2024-12-07 02:06:32,509 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=34 pTM=0.214 ipTM=0.159 tol=8.6
2024-12-07 02:07:14,984 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=34.2 pTM=0.215 ipTM=0.159 tol=10.4
2024-12-07 02:07:57,460 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=34.3 pTM=0.213 ipTM=0.163 tol=8.42
2024-12-07 02:08:39,926 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=34.3 pTM=0.217 ipTM=0.16 tol=7.42
2024-12-07 02:09:22,443 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=34.4 pTM=0.214 ipTM=0.16 tol=6.37
2024-12-07 02:10:04,971 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=34.5 pTM=0.217 ipTM=0.159 tol=5.82
2024-12-07 02:10:47,500 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=34.4 pTM=0.214 ipTM=0.159 tol=14.4
2024-12-07 02:11:30,052 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=34.4 pTM=0.216 ipTM=0.158 tol=12
2024-12-07 02:11:30,053 alphafold2_multimer_v3_model_5_seed_000 took 1317.5s (30 recycles)
2024-12-07 02:11:31,271 reranking models by 'multimer' metric
2024-12-07 02:11:35,259 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 02:14:31,496 Relaxation took 180.2s
2024-12-07 02:14:31,496 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=33.1 pTM=0.213 ipTM=0.251
2024-12-07 02:16:42,156 Relaxation took 130.7s
2024-12-07 02:16:42,157 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=34.4 pTM=0.218 ipTM=0.186
2024-12-07 02:18:47,185 Relaxation took 125.0s
2024-12-07 02:18:47,185 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=33.2 pTM=0.219 ipTM=0.177
2024-12-07 02:22:24,096 Relaxation took 216.9s
2024-12-07 02:22:24,097 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=32.8 pTM=0.208 ipTM=0.173
2024-12-07 02:25:34,916 Relaxation took 190.8s
2024-12-07 02:25:34,917 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=34.4 pTM=0.216 ipTM=0.158
2024-12-07 02:25:38,109 Done