2024-12-07 01:00:07,736 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 01:00:08,048 Running on GPU
2024-12-07 01:00:11,716 Found 6 citations for tools or databases
2024-12-07 01:00:11,716 Query 1/1: LRRC41_NDOR1 (length 1409)
2024-12-07 01:00:12,046 Sleeping for 10s. Reason: PENDING
2024-12-07 01:00:22,314 Sleeping for 10s. Reason: RUNNING
2024-12-07 01:00:32,573 Sleeping for 9s. Reason: RUNNING
2024-12-07 01:00:41,868 Sleeping for 7s. Reason: RUNNING
2024-12-07 01:00:49,130 Sleeping for 6s. Reason: RUNNING
2024-12-07 01:00:55,396 Sleeping for 7s. Reason: RUNNING
2024-12-07 01:01:02,664 Sleeping for 5s. Reason: RUNNING
2024-12-07 01:01:07,952 Sleeping for 6s. Reason: RUNNING
2024-12-07 01:01:14,222 Sleeping for 9s. Reason: RUNNING
2024-12-07 01:01:23,486 Sleeping for 8s. Reason: RUNNING
2024-12-07 01:01:31,766 Sleeping for 8s. Reason: RUNNING
2024-12-07 01:01:40,044 Sleeping for 9s. Reason: RUNNING
2024-12-07 01:01:49,468 Sleeping for 10s. Reason: RUNNING
2024-12-07 01:01:59,735 Sleeping for 8s. Reason: RUNNING
2024-12-07 01:02:08,060 Sleeping for 5s. Reason: RUNNING
2024-12-07 01:02:13,322 Sleeping for 7s. Reason: RUNNING
2024-12-07 01:02:20,592 Sleeping for 8s. Reason: RUNNING
2024-12-07 01:02:28,858 Sleeping for 7s. Reason: RUNNING
2024-12-07 01:02:36,129 Sleeping for 9s. Reason: RUNNING
2024-12-07 01:02:45,402 Sleeping for 10s. Reason: RUNNING
2024-12-07 01:02:55,682 Sleeping for 6s. Reason: RUNNING
2024-12-07 01:03:01,939 Sleeping for 10s. Reason: RUNNING
2024-12-07 01:03:12,205 Sleeping for 5s. Reason: RUNNING
2024-12-07 01:03:17,465 Sleeping for 7s. Reason: RUNNING
2024-12-07 01:03:24,729 Sleeping for 5s. Reason: RUNNING
2024-12-07 01:03:29,997 Sleeping for 5s. Reason: RUNNING
2024-12-07 01:03:35,260 Sleeping for 6s. Reason: RUNNING
2024-12-07 01:03:41,521 Sleeping for 7s. Reason: RUNNING
2024-12-07 01:03:50,695 Sleeping for 7s. Reason: PENDING
2024-12-07 01:03:57,977 Sleeping for 5s. Reason: PENDING
2024-12-07 01:04:03,236 Sleeping for 9s. Reason: PENDING
2024-12-07 01:04:12,503 Sleeping for 6s. Reason: PENDING
2024-12-07 01:04:18,771 Sleeping for 5s. Reason: PENDING
2024-12-07 01:04:24,043 Sleeping for 7s. Reason: RUNNING
2024-12-07 01:04:31,306 Sleeping for 9s. Reason: RUNNING
2024-12-07 01:04:40,570 Sleeping for 6s. Reason: RUNNING
2024-12-07 01:04:46,822 Sleeping for 10s. Reason: RUNNING
2024-12-07 01:04:57,095 Sleeping for 10s. Reason: RUNNING
2024-12-07 01:05:07,369 Sleeping for 10s. Reason: RUNNING
2024-12-07 01:05:17,641 Sleeping for 7s. Reason: RUNNING
2024-12-07 01:05:24,910 Sleeping for 10s. Reason: RUNNING
2024-12-07 01:05:35,170 Sleeping for 8s. Reason: RUNNING
2024-12-07 01:05:43,440 Sleeping for 8s. Reason: RUNNING
2024-12-07 01:05:51,705 Sleeping for 9s. Reason: RUNNING
2024-12-07 01:06:00,967 Sleeping for 5s. Reason: RUNNING
2024-12-07 01:06:06,235 Sleeping for 8s. Reason: RUNNING
2024-12-07 01:06:14,501 Sleeping for 5s. Reason: RUNNING
2024-12-07 01:06:19,775 Sleeping for 6s. Reason: RUNNING
2024-12-07 01:06:26,047 Sleeping for 7s. Reason: RUNNING
2024-12-07 01:06:33,307 Sleeping for 5s. Reason: RUNNING
2024-12-07 01:06:38,573 Sleeping for 10s. Reason: RUNNING
2024-12-07 01:06:51,857 Setting max_seq=508, max_extra_seq=2048
2024-12-07 01:10:38,642 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=70.3 pTM=0.485 ipTM=0.237
2024-12-07 01:11:33,441 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=73.1 pTM=0.498 ipTM=0.231 tol=5.98
2024-12-07 01:12:28,432 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=73.6 pTM=0.497 ipTM=0.226 tol=5.92
2024-12-07 01:13:23,533 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=73.7 pTM=0.493 ipTM=0.223 tol=2.34
2024-12-07 01:14:18,660 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=73.6 pTM=0.497 ipTM=0.233 tol=2.17
2024-12-07 01:15:13,806 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=73.6 pTM=0.498 ipTM=0.233 tol=2.11
2024-12-07 01:16:08,939 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=73.6 pTM=0.506 ipTM=0.351 tol=3.07
2024-12-07 01:17:04,100 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=73.9 pTM=0.496 ipTM=0.224 tol=3.47
2024-12-07 01:17:59,307 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=73.6 pTM=0.5 ipTM=0.234 tol=2.04
2024-12-07 01:18:54,513 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=73.8 pTM=0.497 ipTM=0.23 tol=1.92
2024-12-07 01:19:49,697 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=73.6 pTM=0.504 ipTM=0.238 tol=2.54
2024-12-07 01:20:44,862 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=73.8 pTM=0.5 ipTM=0.233 tol=3.06
2024-12-07 01:21:40,045 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=73.8 pTM=0.504 ipTM=0.236 tol=2.29
2024-12-07 01:22:35,200 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=73.8 pTM=0.499 ipTM=0.23 tol=3.69
2024-12-07 01:23:30,320 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=73.9 pTM=0.5 ipTM=0.236 tol=2.35
2024-12-07 01:24:25,451 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=74.1 pTM=0.498 ipTM=0.232 tol=1.51
2024-12-07 01:25:20,578 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=73.9 pTM=0.501 ipTM=0.233 tol=1.7
2024-12-07 01:26:15,734 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73.8 pTM=0.497 ipTM=0.232 tol=2.14
2024-12-07 01:27:10,941 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=73.4 pTM=0.507 ipTM=0.345 tol=2.39
2024-12-07 01:28:06,202 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=73.9 pTM=0.5 ipTM=0.232 tol=2.82
2024-12-07 01:29:01,450 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=73.7 pTM=0.495 ipTM=0.23 tol=1.43
2024-12-07 01:29:56,651 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=74 pTM=0.497 ipTM=0.229 tol=1.31
2024-12-07 01:30:51,852 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=73.8 pTM=0.496 ipTM=0.227 tol=1.56
2024-12-07 01:31:47,070 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=74 pTM=0.496 ipTM=0.227 tol=2.32
2024-12-07 01:32:42,281 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=73.9 pTM=0.495 ipTM=0.227 tol=2.23
2024-12-07 01:33:37,481 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=73.8 pTM=0.499 ipTM=0.231 tol=2.6
2024-12-07 01:34:32,682 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73.9 pTM=0.499 ipTM=0.234 tol=1.81
2024-12-07 01:35:27,891 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=73.9 pTM=0.497 ipTM=0.229 tol=1.91
2024-12-07 01:36:23,055 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=73.6 pTM=0.505 ipTM=0.255 tol=3.72
2024-12-07 01:37:18,276 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=74.2 pTM=0.495 ipTM=0.222 tol=2.79
2024-12-07 01:38:13,505 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=73.8 pTM=0.5 ipTM=0.235 tol=1.74
2024-12-07 01:38:13,506 alphafold2_multimer_v3_model_1_seed_000 took 1876.6s (30 recycles)
2024-12-07 01:39:09,938 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=70.8 pTM=0.503 ipTM=0.262
2024-12-07 01:40:05,300 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=73.5 pTM=0.496 ipTM=0.224 tol=5.3
2024-12-07 01:41:00,670 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=74.1 pTM=0.5 ipTM=0.227 tol=3.12
2024-12-07 01:41:56,063 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=74.1 pTM=0.494 ipTM=0.223 tol=3.57
2024-12-07 01:42:51,474 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=74 pTM=0.494 ipTM=0.223 tol=3.3
2024-12-07 01:43:46,914 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=74.3 pTM=0.491 ipTM=0.215 tol=3
2024-12-07 01:44:42,331 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=74.2 pTM=0.494 ipTM=0.224 tol=3.97
2024-12-07 01:45:37,757 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=74.1 pTM=0.49 ipTM=0.217 tol=2.47
2024-12-07 01:46:33,176 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=74.2 pTM=0.493 ipTM=0.215 tol=2.59
2024-12-07 01:47:28,599 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.3 pTM=0.491 ipTM=0.219 tol=2.49
2024-12-07 01:48:23,984 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=74.4 pTM=0.495 ipTM=0.219 tol=1.02
2024-12-07 01:49:19,354 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=74.4 pTM=0.494 ipTM=0.222 tol=1.31
2024-12-07 01:50:14,730 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.4 pTM=0.497 ipTM=0.225 tol=1.59
2024-12-07 01:51:10,124 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=74.4 pTM=0.495 ipTM=0.224 tol=3.28
2024-12-07 01:52:05,532 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=74.5 pTM=0.496 ipTM=0.222 tol=2.14
2024-12-07 01:53:00,945 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=74.6 pTM=0.493 ipTM=0.216 tol=2.11
2024-12-07 01:53:56,359 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=74.5 pTM=0.494 ipTM=0.219 tol=1.24
2024-12-07 01:54:51,774 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=74.1 pTM=0.493 ipTM=0.217 tol=5.47
2024-12-07 01:55:47,181 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=74.4 pTM=0.494 ipTM=0.219 tol=4.25
2024-12-07 01:56:42,634 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=74.4 pTM=0.496 ipTM=0.222 tol=2.8
2024-12-07 01:57:38,030 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=74.4 pTM=0.495 ipTM=0.223 tol=1.31
2024-12-07 01:58:33,450 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=74.6 pTM=0.493 ipTM=0.218 tol=1.67
2024-12-07 01:59:28,894 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=74.6 pTM=0.496 ipTM=0.22 tol=0.961
2024-12-07 02:00:24,340 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=74.7 pTM=0.491 ipTM=0.211 tol=1.63
2024-12-07 02:01:19,759 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=74.7 pTM=0.492 ipTM=0.214 tol=1.14
2024-12-07 02:02:15,130 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=74.4 pTM=0.494 ipTM=0.222 tol=2.36
2024-12-07 02:03:10,474 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=74.6 pTM=0.495 ipTM=0.218 tol=2.25
2024-12-07 02:04:05,804 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=74.5 pTM=0.495 ipTM=0.221 tol=1.26
2024-12-07 02:05:01,150 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=74.4 pTM=0.495 ipTM=0.222 tol=1.1
2024-12-07 02:05:56,537 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=74.7 pTM=0.494 ipTM=0.221 tol=1.02
2024-12-07 02:06:51,919 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=74.6 pTM=0.497 ipTM=0.224 tol=1.36
2024-12-07 02:06:51,920 alphafold2_multimer_v3_model_2_seed_000 took 1717.2s (30 recycles)
2024-12-07 02:07:48,342 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=71 pTM=0.494 ipTM=0.319
2024-12-07 02:08:43,722 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=72.4 pTM=0.49 ipTM=0.22 tol=8.67
2024-12-07 02:09:39,034 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=73.1 pTM=0.494 ipTM=0.24 tol=4.06
2024-12-07 02:10:34,340 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=73.2 pTM=0.491 ipTM=0.225 tol=5.48
2024-12-07 02:11:29,686 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=73.1 pTM=0.489 ipTM=0.218 tol=4.55
2024-12-07 02:12:25,010 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=73.3 pTM=0.489 ipTM=0.282 tol=3.88
2024-12-07 02:13:20,355 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=73 pTM=0.486 ipTM=0.22 tol=3.8
2024-12-07 02:14:15,719 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=72.9 pTM=0.487 ipTM=0.213 tol=3.82
2024-12-07 02:15:11,066 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=73 pTM=0.487 ipTM=0.209 tol=3.8
2024-12-07 02:16:06,350 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=73.7 pTM=0.491 ipTM=0.34 tol=6
2024-12-07 02:17:01,707 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=73.1 pTM=0.489 ipTM=0.214 tol=4.51
2024-12-07 02:17:57,100 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=73.2 pTM=0.486 ipTM=0.208 tol=6.5
2024-12-07 02:18:52,472 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=73.9 pTM=0.492 ipTM=0.229 tol=6.57
2024-12-07 02:19:47,821 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=73 pTM=0.485 ipTM=0.214 tol=5.6
2024-12-07 02:20:43,153 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=73 pTM=0.49 ipTM=0.221 tol=6.83
2024-12-07 02:21:38,558 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=73.1 pTM=0.493 ipTM=0.223 tol=4.53
2024-12-07 02:22:33,923 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=73 pTM=0.488 ipTM=0.222 tol=4.93
2024-12-07 02:23:29,285 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=73.1 pTM=0.484 ipTM=0.214 tol=2.39
2024-12-07 02:24:24,647 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=73.2 pTM=0.49 ipTM=0.224 tol=4.24
2024-12-07 02:25:19,925 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=73 pTM=0.504 ipTM=0.261 tol=10.5
2024-12-07 02:26:15,299 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=72.9 pTM=0.487 ipTM=0.221 tol=6.89
2024-12-07 02:27:10,706 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=73.2 pTM=0.49 ipTM=0.223 tol=3.37
2024-12-07 02:28:06,081 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=72.9 pTM=0.484 ipTM=0.215 tol=2.34
2024-12-07 02:29:01,475 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=73.1 pTM=0.49 ipTM=0.219 tol=3.06
2024-12-07 02:29:56,819 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=73.4 pTM=0.492 ipTM=0.242 tol=6.55
2024-12-07 02:30:52,147 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=73.6 pTM=0.49 ipTM=0.231 tol=4.38
2024-12-07 02:31:47,496 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=73.1 pTM=0.489 ipTM=0.218 tol=10.5
2024-12-07 02:32:42,889 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=73.1 pTM=0.487 ipTM=0.212 tol=6.87
2024-12-07 02:33:38,271 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=73.4 pTM=0.49 ipTM=0.237 tol=6.12
2024-12-07 02:34:33,614 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=73.8 pTM=0.496 ipTM=0.279 tol=3.82
2024-12-07 02:35:29,033 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=73.4 pTM=0.488 ipTM=0.215 tol=3.67
2024-12-07 02:35:29,034 alphafold2_multimer_v3_model_3_seed_000 took 1715.9s (30 recycles)
2024-12-07 02:36:25,492 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=70.4 pTM=0.495 ipTM=0.258
2024-12-07 02:37:20,833 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=71.1 pTM=0.491 ipTM=0.218 tol=9.57
2024-12-07 02:38:16,148 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=72.1 pTM=0.495 ipTM=0.233 tol=7.33
2024-12-07 02:39:11,563 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=72.3 pTM=0.492 ipTM=0.211 tol=8.54
2024-12-07 02:40:06,910 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=71.7 pTM=0.49 ipTM=0.214 tol=5.69
2024-12-07 02:41:02,206 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=71.6 pTM=0.489 ipTM=0.211 tol=7.52
2024-12-07 02:41:57,484 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71.6 pTM=0.49 ipTM=0.216 tol=4.26
2024-12-07 02:42:52,774 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=72.2 pTM=0.493 ipTM=0.214 tol=4.17
2024-12-07 02:43:48,123 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=72.1 pTM=0.492 ipTM=0.214 tol=4.59
2024-12-07 02:44:43,490 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=72.3 pTM=0.493 ipTM=0.213 tol=2.59
2024-12-07 02:45:38,903 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=72.2 pTM=0.492 ipTM=0.213 tol=3.29
2024-12-07 02:46:34,277 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=72.2 pTM=0.496 ipTM=0.22 tol=3.04
2024-12-07 02:47:29,674 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=72.2 pTM=0.493 ipTM=0.214 tol=1.91
2024-12-07 02:48:24,984 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=72.2 pTM=0.495 ipTM=0.221 tol=2.28
2024-12-07 02:49:20,316 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=72.3 pTM=0.493 ipTM=0.216 tol=3.54
2024-12-07 02:50:15,647 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=72.6 pTM=0.495 ipTM=0.216 tol=3.16
2024-12-07 02:51:11,011 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=72.2 pTM=0.492 ipTM=0.213 tol=4.57
2024-12-07 02:52:06,357 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=72.4 pTM=0.495 ipTM=0.219 tol=4.1
2024-12-07 02:53:01,802 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=72.2 pTM=0.49 ipTM=0.212 tol=3.51
2024-12-07 02:53:57,192 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=72.3 pTM=0.497 ipTM=0.222 tol=3.6
2024-12-07 02:54:52,576 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=72 pTM=0.489 ipTM=0.213 tol=2.92
2024-12-07 02:55:47,968 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=72.6 pTM=0.495 ipTM=0.218 tol=4.25
2024-12-07 02:56:43,381 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=72.3 pTM=0.489 ipTM=0.211 tol=3.86
2024-12-07 02:57:38,784 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=72.3 pTM=0.494 ipTM=0.22 tol=2.48
2024-12-07 02:58:34,217 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=72.3 pTM=0.491 ipTM=0.213 tol=5.16
2024-12-07 02:59:29,606 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=72.1 pTM=0.493 ipTM=0.218 tol=4.44
2024-12-07 03:00:24,996 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=72.2 pTM=0.49 ipTM=0.21 tol=3.66
2024-12-07 03:01:20,353 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=72.1 pTM=0.494 ipTM=0.218 tol=3.61
2024-12-07 03:02:15,741 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=72.1 pTM=0.49 ipTM=0.212 tol=3.45
2024-12-07 03:03:11,134 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=72.7 pTM=0.495 ipTM=0.216 tol=5.27
2024-12-07 03:04:06,532 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=72.2 pTM=0.49 ipTM=0.212 tol=2.86
2024-12-07 03:04:06,533 alphafold2_multimer_v3_model_4_seed_000 took 1716.3s (30 recycles)
2024-12-07 03:05:02,945 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=70.2 pTM=0.495 ipTM=0.253
2024-12-07 03:05:58,208 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.4 pTM=0.494 ipTM=0.229 tol=8.06
2024-12-07 03:06:53,469 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=72.4 pTM=0.501 ipTM=0.263 tol=5.36
2024-12-07 03:07:48,820 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=72.9 pTM=0.496 ipTM=0.264 tol=4.11
2024-12-07 03:08:44,229 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=72.8 pTM=0.494 ipTM=0.271 tol=2.13
2024-12-07 03:09:39,594 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=72.9 pTM=0.495 ipTM=0.264 tol=2.81
2024-12-07 03:10:34,995 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=72.6 pTM=0.488 ipTM=0.222 tol=3.34
2024-12-07 03:11:30,332 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=72.5 pTM=0.5 ipTM=0.241 tol=11.8
2024-12-07 03:12:25,691 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=72.6 pTM=0.501 ipTM=0.245 tol=2.67
2024-12-07 03:13:21,077 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=72.8 pTM=0.49 ipTM=0.229 tol=2.24
2024-12-07 03:14:16,493 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=72.6 pTM=0.49 ipTM=0.223 tol=2.4
2024-12-07 03:15:11,863 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=72.7 pTM=0.495 ipTM=0.237 tol=3.16
2024-12-07 03:16:07,236 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=72.7 pTM=0.498 ipTM=0.242 tol=3.73
2024-12-07 03:17:02,641 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=72.6 pTM=0.492 ipTM=0.234 tol=1.79
2024-12-07 03:17:58,069 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=72.6 pTM=0.489 ipTM=0.22 tol=4.31
2024-12-07 03:18:53,365 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=72.8 pTM=0.516 ipTM=0.284 tol=5.84
2024-12-07 03:19:48,738 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=72.8 pTM=0.491 ipTM=0.233 tol=2.3
2024-12-07 03:20:44,279 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=72.8 pTM=0.487 ipTM=0.214 tol=11.2
2024-12-07 03:21:39,715 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=73.1 pTM=0.49 ipTM=0.226 tol=4.57
2024-12-07 03:22:35,029 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=72.6 pTM=0.553 ipTM=0.371 tol=13
2024-12-07 03:23:30,445 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=72.3 pTM=0.486 ipTM=0.224 tol=5.98
2024-12-07 03:24:25,855 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=72.9 pTM=0.49 ipTM=0.222 tol=4.19
2024-12-07 03:25:21,090 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=72.7 pTM=0.528 ipTM=0.312 tol=4
2024-12-07 03:26:16,369 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=72.8 pTM=0.492 ipTM=0.234 tol=2.5
2024-12-07 03:27:11,768 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=72.8 pTM=0.487 ipTM=0.218 tol=6.67
2024-12-07 03:28:07,131 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=72.8 pTM=0.49 ipTM=0.222 tol=6.12
2024-12-07 03:29:02,483 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=72.7 pTM=0.489 ipTM=0.221 tol=3.42
2024-12-07 03:29:57,849 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=72.2 pTM=0.486 ipTM=0.214 tol=4.45
2024-12-07 03:30:53,258 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=72.4 pTM=0.488 ipTM=0.219 tol=6.18
2024-12-07 03:31:48,654 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=73.1 pTM=0.487 ipTM=0.217 tol=5.77
2024-12-07 03:32:44,044 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=72.4 pTM=0.486 ipTM=0.217 tol=3.6
2024-12-07 03:32:44,046 alphafold2_multimer_v3_model_5_seed_000 took 1716.3s (30 recycles)
2024-12-07 03:32:45,229 reranking models by 'multimer' metric
2024-12-07 03:32:48,905 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 03:35:08,751 Relaxation took 143.5s
2024-12-07 03:35:08,752 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=73.8 pTM=0.5 ipTM=0.235
2024-12-07 03:37:18,063 Relaxation took 129.3s
2024-12-07 03:37:18,063 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=74.6 pTM=0.497 ipTM=0.224
2024-12-07 03:39:25,833 Relaxation took 127.8s
2024-12-07 03:39:25,833 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=72.4 pTM=0.486 ipTM=0.217
2024-12-07 03:41:57,032 Relaxation took 151.2s
2024-12-07 03:41:57,032 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=73.4 pTM=0.488 ipTM=0.215
2024-12-07 03:44:16,875 Relaxation took 139.8s
2024-12-07 03:44:16,875 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=72.2 pTM=0.49 ipTM=0.212
2024-12-07 03:44:19,687 Done