2024-12-07 01:27:40,753 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 01:27:42,178 Running on GPU
2024-12-07 01:27:46,269 Found 6 citations for tools or databases
2024-12-07 01:27:46,269 Query 1/1: LTN1_NPTN (length 2164)
2024-12-07 01:27:46,588 Sleeping for 8s. Reason: PENDING
2024-12-07 01:27:54,849 Sleeping for 9s. Reason: RUNNING
2024-12-07 01:28:04,113 Sleeping for 10s. Reason: RUNNING
2024-12-07 01:28:14,373 Sleeping for 5s. Reason: RUNNING
2024-12-07 01:28:19,633 Sleeping for 10s. Reason: RUNNING
2024-12-07 01:28:29,894 Sleeping for 5s. Reason: RUNNING
2024-12-07 01:28:35,154 Sleeping for 7s. Reason: RUNNING
2024-12-07 01:28:42,414 Sleeping for 8s. Reason: RUNNING
2024-12-07 01:28:50,673 Sleeping for 7s. Reason: RUNNING
2024-12-07 01:28:57,925 Sleeping for 5s. Reason: RUNNING
2024-12-07 01:29:03,176 Sleeping for 5s. Reason: RUNNING
2024-12-07 01:29:08,436 Sleeping for 5s. Reason: RUNNING
2024-12-07 01:29:13,698 Sleeping for 10s. Reason: RUNNING
2024-12-07 01:29:23,966 Sleeping for 8s. Reason: RUNNING
2024-12-07 01:29:32,220 Sleeping for 8s. Reason: RUNNING
2024-12-07 01:29:40,480 Sleeping for 8s. Reason: RUNNING
2024-12-07 01:29:48,741 Sleeping for 10s. Reason: RUNNING
2024-12-07 01:29:59,001 Sleeping for 5s. Reason: RUNNING
2024-12-07 01:30:04,256 Sleeping for 8s. Reason: RUNNING
2024-12-07 01:30:12,514 Sleeping for 7s. Reason: RUNNING
2024-12-07 01:30:19,774 Sleeping for 8s. Reason: RUNNING
2024-12-07 01:30:28,041 Sleeping for 9s. Reason: RUNNING
2024-12-07 01:30:37,298 Sleeping for 6s. Reason: RUNNING
2024-12-07 01:30:43,907 Sleeping for 5s. Reason: RUNNING
2024-12-07 01:30:49,161 Sleeping for 7s. Reason: RUNNING
2024-12-07 01:30:56,415 Sleeping for 8s. Reason: RUNNING
2024-12-07 01:31:04,674 Sleeping for 6s. Reason: RUNNING
2024-12-07 01:31:10,928 Sleeping for 9s. Reason: RUNNING
2024-12-07 01:31:20,188 Sleeping for 9s. Reason: RUNNING
2024-12-07 01:31:29,451 Sleeping for 6s. Reason: RUNNING
2024-12-07 01:31:35,709 Sleeping for 10s. Reason: RUNNING
2024-12-07 01:31:45,979 Sleeping for 10s. Reason: RUNNING
2024-12-07 01:31:56,245 Sleeping for 6s. Reason: RUNNING
2024-12-07 01:32:02,503 Sleeping for 6s. Reason: RUNNING
2024-12-07 01:32:08,760 Sleeping for 7s. Reason: RUNNING
2024-12-07 01:32:16,027 Sleeping for 6s. Reason: RUNNING
2024-12-07 01:32:22,287 Sleeping for 6s. Reason: RUNNING
2024-12-07 01:32:28,552 Sleeping for 8s. Reason: RUNNING
2024-12-07 01:32:36,810 Sleeping for 7s. Reason: RUNNING
2024-12-07 01:32:44,066 Sleeping for 7s. Reason: RUNNING
2024-12-07 01:32:52,998 Sleeping for 10s. Reason: PENDING
2024-12-07 01:33:03,281 Sleeping for 6s. Reason: RUNNING
2024-12-07 01:33:09,697 Sleeping for 9s. Reason: RUNNING
2024-12-07 01:33:18,958 Sleeping for 8s. Reason: RUNNING
2024-12-07 01:33:27,214 Sleeping for 6s. Reason: RUNNING
2024-12-07 01:33:33,483 Sleeping for 9s. Reason: RUNNING
2024-12-07 01:33:42,748 Sleeping for 10s. Reason: RUNNING
2024-12-07 01:33:53,021 Sleeping for 9s. Reason: RUNNING
2024-12-07 01:34:02,288 Sleeping for 7s. Reason: RUNNING
2024-12-07 01:34:09,551 Sleeping for 7s. Reason: RUNNING
2024-12-07 01:34:16,815 Sleeping for 9s. Reason: RUNNING
2024-12-07 01:34:26,082 Sleeping for 5s. Reason: RUNNING
2024-12-07 01:34:31,338 Sleeping for 10s. Reason: RUNNING
2024-12-07 01:34:41,603 Sleeping for 7s. Reason: RUNNING
2024-12-07 01:34:48,859 Sleeping for 5s. Reason: RUNNING
2024-12-07 01:34:54,119 Sleeping for 10s. Reason: RUNNING
2024-12-07 01:35:04,385 Sleeping for 10s. Reason: RUNNING
2024-12-07 01:35:14,648 Sleeping for 5s. Reason: RUNNING
2024-12-07 01:35:19,900 Sleeping for 5s. Reason: RUNNING
2024-12-07 01:35:32,474 Setting max_seq=508, max_extra_seq=2048
2024-12-07 01:41:32,636 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=76.8 pTM=0.557 ipTM=0.22
2024-12-07 01:43:58,372 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=76.6 pTM=0.557 ipTM=0.215 tol=6.08
2024-12-07 01:46:23,925 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=76.6 pTM=0.551 ipTM=0.23 tol=5.95
2024-12-07 01:48:49,391 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=76.8 pTM=0.552 ipTM=0.29 tol=7.5
2024-12-07 01:51:14,734 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=77.1 pTM=0.565 ipTM=0.381 tol=3.71
2024-12-07 01:53:40,003 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=77.3 pTM=0.576 ipTM=0.44 tol=2.61
2024-12-07 01:56:05,181 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=77.4 pTM=0.586 ipTM=0.456 tol=2.28
2024-12-07 01:58:30,308 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=77.6 pTM=0.588 ipTM=0.469 tol=1.58
2024-12-07 02:00:55,349 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=77.4 pTM=0.595 ipTM=0.481 tol=1.58
2024-12-07 02:03:20,317 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=77.8 pTM=0.595 ipTM=0.49 tol=1.36
2024-12-07 02:05:45,279 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=77.7 pTM=0.59 ipTM=0.486 tol=0.905
2024-12-07 02:08:10,291 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=77.7 pTM=0.59 ipTM=0.487 tol=0.749
2024-12-07 02:10:35,290 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=77.6 pTM=0.592 ipTM=0.489 tol=0.981
2024-12-07 02:13:00,259 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=77.6 pTM=0.591 ipTM=0.487 tol=1.06
2024-12-07 02:15:25,362 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=77.4 pTM=0.583 ipTM=0.482 tol=1.22
2024-12-07 02:17:50,416 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=77.6 pTM=0.589 ipTM=0.48 tol=1.64
2024-12-07 02:20:15,448 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=77.6 pTM=0.589 ipTM=0.479 tol=0.698
2024-12-07 02:22:40,538 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=77.6 pTM=0.59 ipTM=0.484 tol=0.754
2024-12-07 02:25:05,586 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=77.4 pTM=0.583 ipTM=0.48 tol=1.85
2024-12-07 02:27:30,569 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=77.6 pTM=0.591 ipTM=0.485 tol=1.2
2024-12-07 02:29:55,522 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=77.8 pTM=0.594 ipTM=0.491 tol=1.36
2024-12-07 02:32:20,432 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=77.7 pTM=0.593 ipTM=0.484 tol=1.05
2024-12-07 02:34:45,344 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=77.5 pTM=0.589 ipTM=0.479 tol=1.49
2024-12-07 02:37:10,219 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=77.6 pTM=0.588 ipTM=0.482 tol=1.81
2024-12-07 02:39:35,089 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=77.6 pTM=0.591 ipTM=0.488 tol=2.92
2024-12-07 02:41:59,997 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=77.7 pTM=0.592 ipTM=0.483 tol=2.31
2024-12-07 02:44:24,919 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=77.6 pTM=0.588 ipTM=0.483 tol=1.73
2024-12-07 02:46:49,855 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=77.6 pTM=0.593 ipTM=0.483 tol=2.15
2024-12-07 02:49:14,769 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=77.8 pTM=0.591 ipTM=0.487 tol=1.79
2024-12-07 02:51:39,628 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=77.7 pTM=0.587 ipTM=0.488 tol=0.862
2024-12-07 02:54:04,512 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=77.5 pTM=0.589 ipTM=0.48 tol=2.39
2024-12-07 02:54:04,516 alphafold2_multimer_v3_model_1_seed_000 took 4691.0s (30 recycles)
2024-12-07 02:56:33,747 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=77.4 pTM=0.559 ipTM=0.228
2024-12-07 02:58:59,365 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=78.1 pTM=0.567 ipTM=0.209 tol=13.6
2024-12-07 03:01:25,098 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=78.3 pTM=0.558 ipTM=0.212 tol=4.62
2024-12-07 03:03:50,838 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=78.2 pTM=0.563 ipTM=0.213 tol=4.02
2024-12-07 03:06:16,479 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=78.4 pTM=0.564 ipTM=0.21 tol=2.91
2024-12-07 03:08:42,041 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=78.4 pTM=0.556 ipTM=0.205 tol=2.14
2024-12-07 03:11:07,575 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=78.6 pTM=0.559 ipTM=0.205 tol=1.71
2024-12-07 03:13:33,163 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=78.8 pTM=0.559 ipTM=0.203 tol=1.63
2024-12-07 03:15:58,872 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=78.8 pTM=0.558 ipTM=0.203 tol=1.03
2024-12-07 03:18:24,552 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=78.7 pTM=0.558 ipTM=0.207 tol=1.92
2024-12-07 03:20:50,077 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=78.6 pTM=0.559 ipTM=0.208 tol=1.3
2024-12-07 03:23:15,604 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=78.8 pTM=0.558 ipTM=0.206 tol=0.883
2024-12-07 03:25:41,170 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=78.9 pTM=0.558 ipTM=0.203 tol=1.83
2024-12-07 03:28:06,751 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=78.9 pTM=0.557 ipTM=0.204 tol=0.671
2024-12-07 03:30:32,351 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=78.5 pTM=0.554 ipTM=0.206 tol=2.92
2024-12-07 03:32:57,875 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=78.7 pTM=0.555 ipTM=0.207 tol=1.27
2024-12-07 03:35:23,361 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=78.7 pTM=0.557 ipTM=0.208 tol=0.981
2024-12-07 03:37:48,868 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=78.7 pTM=0.555 ipTM=0.205 tol=1.63
2024-12-07 03:40:14,524 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=78.6 pTM=0.555 ipTM=0.206 tol=1.11
2024-12-07 03:42:40,274 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=78.6 pTM=0.554 ipTM=0.205 tol=0.834
2024-12-07 03:45:05,965 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=78.6 pTM=0.555 ipTM=0.205 tol=0.752
2024-12-07 03:47:31,524 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=78.6 pTM=0.554 ipTM=0.206 tol=1.03
2024-12-07 03:49:57,033 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=78.6 pTM=0.555 ipTM=0.207 tol=0.912
2024-12-07 03:52:22,560 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=78.7 pTM=0.557 ipTM=0.208 tol=0.869
2024-12-07 03:54:48,159 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=78.6 pTM=0.559 ipTM=0.208 tol=0.644
2024-12-07 03:57:13,747 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=78.6 pTM=0.557 ipTM=0.207 tol=1.11
2024-12-07 03:59:39,263 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=78.6 pTM=0.558 ipTM=0.21 tol=0.913
2024-12-07 04:02:04,733 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=78.4 pTM=0.556 ipTM=0.208 tol=1.75
2024-12-07 04:04:30,227 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=78.6 pTM=0.556 ipTM=0.206 tol=1.2
2024-12-07 04:06:55,817 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=78.5 pTM=0.555 ipTM=0.207 tol=1.04
2024-12-07 04:09:21,386 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=78.6 pTM=0.554 ipTM=0.205 tol=1.55
2024-12-07 04:09:21,389 alphafold2_multimer_v3_model_2_seed_000 took 4513.0s (30 recycles)
2024-12-07 04:11:50,766 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=76.1 pTM=0.532 ipTM=0.208
2024-12-07 04:14:16,290 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=76.4 pTM=0.537 ipTM=0.207 tol=10.6
2024-12-07 04:16:41,897 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=75.9 pTM=0.528 ipTM=0.202 tol=7.37
2024-12-07 04:19:07,252 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=77.1 pTM=0.518 ipTM=0.433 tol=25.5
2024-12-07 04:21:32,411 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=77.6 pTM=0.52 ipTM=0.443 tol=6.02
2024-12-07 04:23:57,523 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=77.6 pTM=0.52 ipTM=0.458 tol=2.21
2024-12-07 04:26:22,728 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=77.5 pTM=0.516 ipTM=0.449 tol=3.32
2024-12-07 04:28:47,915 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=77.6 pTM=0.521 ipTM=0.442 tol=3.03
2024-12-07 04:31:13,090 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=77.3 pTM=0.521 ipTM=0.438 tol=2.56
2024-12-07 04:33:38,182 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=77.4 pTM=0.522 ipTM=0.438 tol=3.66
2024-12-07 04:36:03,321 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=77.6 pTM=0.521 ipTM=0.444 tol=1.77
2024-12-07 04:38:28,380 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=77.6 pTM=0.522 ipTM=0.441 tol=1.91
2024-12-07 04:40:53,416 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=77.6 pTM=0.519 ipTM=0.442 tol=1.08
2024-12-07 04:43:18,556 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=77.7 pTM=0.519 ipTM=0.453 tol=2.42
2024-12-07 04:45:43,747 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=77.4 pTM=0.516 ipTM=0.438 tol=1.21
2024-12-07 04:48:08,845 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=77.5 pTM=0.518 ipTM=0.443 tol=3.56
2024-12-07 04:50:33,919 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=77.4 pTM=0.519 ipTM=0.452 tol=1.48
2024-12-07 04:52:59,014 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=77.4 pTM=0.52 ipTM=0.454 tol=2.42
2024-12-07 04:55:24,105 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=77.4 pTM=0.517 ipTM=0.45 tol=2.8
2024-12-07 04:57:49,229 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=77.5 pTM=0.515 ipTM=0.444 tol=1.76
2024-12-07 05:00:14,418 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=77.8 pTM=0.521 ipTM=0.461 tol=3.61
2024-12-07 05:02:39,541 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=77.7 pTM=0.519 ipTM=0.452 tol=2.45
2024-12-07 05:05:04,633 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=77.6 pTM=0.518 ipTM=0.452 tol=2.65
2024-12-07 05:07:29,733 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=77.9 pTM=0.522 ipTM=0.458 tol=2.97
2024-12-07 05:09:54,896 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=77.9 pTM=0.519 ipTM=0.466 tol=2.76
2024-12-07 05:12:20,011 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=77.9 pTM=0.522 ipTM=0.462 tol=1.43
2024-12-07 05:14:45,146 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=77.8 pTM=0.52 ipTM=0.448 tol=3.27
2024-12-07 05:17:10,324 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=77.6 pTM=0.52 ipTM=0.449 tol=3.23
2024-12-07 05:19:35,487 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=77.8 pTM=0.519 ipTM=0.45 tol=2.39
2024-12-07 05:22:00,536 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=77.6 pTM=0.514 ipTM=0.453 tol=2.44
2024-12-07 05:24:25,562 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=77.6 pTM=0.519 ipTM=0.447 tol=2.27
2024-12-07 05:24:25,564 alphafold2_multimer_v3_model_3_seed_000 took 4500.3s (30 recycles)
2024-12-07 05:26:54,762 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=76.8 pTM=0.583 ipTM=0.213
2024-12-07 05:29:20,012 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=76.8 pTM=0.578 ipTM=0.209 tol=18.3
2024-12-07 05:31:44,950 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=77.3 pTM=0.571 ipTM=0.37 tol=15.3
2024-12-07 05:34:10,134 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=77.1 pTM=0.574 ipTM=0.257 tol=26.5
2024-12-07 05:36:35,288 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=77.4 pTM=0.572 ipTM=0.27 tol=3.23
2024-12-07 05:39:00,263 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=77.6 pTM=0.571 ipTM=0.269 tol=13.8
2024-12-07 05:41:25,396 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=77.1 pTM=0.566 ipTM=0.25 tol=5.94
2024-12-07 05:43:50,507 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=77.4 pTM=0.567 ipTM=0.232 tol=4.04
2024-12-07 05:46:15,577 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=77 pTM=0.57 ipTM=0.247 tol=3.78
2024-12-07 05:48:40,625 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=77.4 pTM=0.573 ipTM=0.271 tol=3.17
2024-12-07 05:51:05,667 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=76.6 pTM=0.573 ipTM=0.281 tol=14.4
2024-12-07 05:53:30,675 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=77.2 pTM=0.578 ipTM=0.31 tol=25.1
2024-12-07 05:55:56,062 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=76.9 pTM=0.564 ipTM=0.226 tol=18
2024-12-07 05:58:21,440 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=76.8 pTM=0.561 ipTM=0.225 tol=11.8
2024-12-07 06:00:46,706 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=76.4 pTM=0.56 ipTM=0.301 tol=9.81
2024-12-07 06:03:12,090 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=76.7 pTM=0.562 ipTM=0.222 tol=19.8
2024-12-07 06:05:37,276 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=76.9 pTM=0.565 ipTM=0.236 tol=6.91
2024-12-07 06:08:02,454 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=77.1 pTM=0.567 ipTM=0.311 tol=13.5
2024-12-07 06:10:27,923 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=76.9 pTM=0.565 ipTM=0.221 tol=19.6
2024-12-07 06:12:53,223 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=77.1 pTM=0.564 ipTM=0.238 tol=3.95
2024-12-07 06:15:18,225 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=77.2 pTM=0.569 ipTM=0.295 tol=14.8
2024-12-07 06:17:43,450 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=76.9 pTM=0.562 ipTM=0.223 tol=14.3
2024-12-07 06:20:08,521 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=76.9 pTM=0.561 ipTM=0.302 tol=20.6
2024-12-07 06:22:33,773 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=77 pTM=0.57 ipTM=0.229 tol=23.3
2024-12-07 06:24:58,946 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=77.2 pTM=0.565 ipTM=0.272 tol=4.38
2024-12-07 06:27:24,158 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=77.3 pTM=0.572 ipTM=0.279 tol=8.87
2024-12-07 06:29:49,393 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=77.2 pTM=0.571 ipTM=0.279 tol=5.5
2024-12-07 06:32:14,743 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=76.9 pTM=0.564 ipTM=0.241 tol=15.3
2024-12-07 06:34:39,888 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=77.2 pTM=0.567 ipTM=0.275 tol=15.7
2024-12-07 06:37:05,221 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=77.1 pTM=0.566 ipTM=0.258 tol=2.95
2024-12-07 06:39:30,742 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=77.1 pTM=0.561 ipTM=0.253 tol=12.3
2024-12-07 06:39:30,745 alphafold2_multimer_v3_model_4_seed_000 took 4501.3s (30 recycles)
2024-12-07 06:42:00,518 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=75.4 pTM=0.516 ipTM=0.189
2024-12-07 06:44:26,222 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=75.1 pTM=0.526 ipTM=0.22 tol=9.31
2024-12-07 06:46:51,803 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=75.2 pTM=0.517 ipTM=0.344 tol=14.1
2024-12-07 06:49:17,782 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=75.9 pTM=0.508 ipTM=0.209 tol=14.7
2024-12-07 06:51:43,505 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=76 pTM=0.514 ipTM=0.203 tol=6.54
2024-12-07 06:54:09,082 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=75.9 pTM=0.516 ipTM=0.23 tol=11.2
2024-12-07 06:56:34,654 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=75.9 pTM=0.521 ipTM=0.203 tol=7.56
2024-12-07 06:59:00,127 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=76.1 pTM=0.522 ipTM=0.206 tol=5.4
2024-12-07 07:01:25,674 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=76 pTM=0.521 ipTM=0.2 tol=4.2
2024-12-07 07:03:51,021 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=75.7 pTM=0.522 ipTM=0.327 tol=13.4
2024-12-07 07:06:16,335 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=75.8 pTM=0.512 ipTM=0.328 tol=5.45
2024-12-07 07:08:41,443 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=76.5 pTM=0.516 ipTM=0.364 tol=11.6
2024-12-07 07:11:06,542 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=77.1 pTM=0.516 ipTM=0.395 tol=4.61
2024-12-07 07:13:31,507 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=77.2 pTM=0.513 ipTM=0.427 tol=3.19
2024-12-07 07:15:56,436 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=77.1 pTM=0.51 ipTM=0.417 tol=1.5
2024-12-07 07:18:21,440 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=77.2 pTM=0.512 ipTM=0.42 tol=2.13
2024-12-07 07:20:46,537 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=77.1 pTM=0.508 ipTM=0.431 tol=1.56
2024-12-07 07:23:11,582 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=77.4 pTM=0.514 ipTM=0.436 tol=0.976
2024-12-07 07:25:36,567 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=77.5 pTM=0.518 ipTM=0.435 tol=1.6
2024-12-07 07:28:01,631 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=77.3 pTM=0.513 ipTM=0.417 tol=1.85
2024-12-07 07:30:26,653 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=77.3 pTM=0.512 ipTM=0.418 tol=1.63
2024-12-07 07:32:51,604 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=77.2 pTM=0.512 ipTM=0.417 tol=1.47
2024-12-07 07:35:16,547 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=77.2 pTM=0.511 ipTM=0.418 tol=2.22
2024-12-07 07:37:41,506 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=77.5 pTM=0.515 ipTM=0.417 tol=1.45
2024-12-07 07:40:06,468 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=77.3 pTM=0.512 ipTM=0.421 tol=1.13
2024-12-07 07:42:31,427 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=77.2 pTM=0.511 ipTM=0.42 tol=1.53
2024-12-07 07:44:56,386 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=77.2 pTM=0.51 ipTM=0.412 tol=0.884
2024-12-07 07:47:21,328 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=77.3 pTM=0.511 ipTM=0.415 tol=1.49
2024-12-07 07:49:46,261 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=77.2 pTM=0.511 ipTM=0.411 tol=1.05
2024-12-07 07:52:11,206 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=77.2 pTM=0.509 ipTM=0.424 tol=1.63
2024-12-07 07:54:36,137 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=77.1 pTM=0.508 ipTM=0.418 tol=1.47
2024-12-07 07:54:36,140 alphafold2_multimer_v3_model_5_seed_000 took 4501.5s (30 recycles)
2024-12-07 07:54:40,031 reranking models by 'multimer' metric
2024-12-07 07:54:45,842 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 08:03:36,329 Relaxation took 536.3s
2024-12-07 08:03:36,330 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=77.5 pTM=0.589 ipTM=0.48
2024-12-07 08:13:50,999 Relaxation took 614.7s
2024-12-07 08:13:50,999 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=77.6 pTM=0.519 ipTM=0.447
2024-12-07 08:17:41,744 Relaxation took 230.7s
2024-12-07 08:17:41,744 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=77.1 pTM=0.508 ipTM=0.418
2024-12-07 08:25:55,331 Relaxation took 493.6s
2024-12-07 08:25:55,331 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=77.1 pTM=0.561 ipTM=0.253
2024-12-07 08:32:38,980 Relaxation took 403.6s
2024-12-07 08:32:38,980 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=78.6 pTM=0.554 ipTM=0.205
2024-12-07 08:32:47,170 Done