2024-12-07 02:22:37,106 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 02:22:37,439 Running on GPU
2024-12-07 02:22:41,011 Found 6 citations for tools or databases
2024-12-07 02:22:41,011 Query 1/1: MDM2_TSPYL6 (length 901)
2024-12-07 02:22:41,332 Sleeping for 8s. Reason: PENDING
2024-12-07 02:22:49,601 Sleeping for 5s. Reason: PENDING
2024-12-07 02:22:54,865 Sleeping for 7s. Reason: PENDING
2024-12-07 02:23:02,122 Sleeping for 6s. Reason: RUNNING
2024-12-07 02:23:08,373 Sleeping for 9s. Reason: RUNNING
2024-12-07 02:23:17,630 Sleeping for 5s. Reason: RUNNING
2024-12-07 02:23:22,887 Sleeping for 10s. Reason: RUNNING
2024-12-07 02:23:33,149 Sleeping for 5s. Reason: RUNNING
2024-12-07 02:23:38,402 Sleeping for 8s. Reason: RUNNING
2024-12-07 02:23:46,670 Sleeping for 10s. Reason: RUNNING
2024-12-07 02:23:56,932 Sleeping for 6s. Reason: RUNNING
2024-12-07 02:24:03,187 Sleeping for 5s. Reason: RUNNING
2024-12-07 02:24:08,804 Sleeping for 9s. Reason: RUNNING
2024-12-07 02:24:19,573 Sleeping for 10s. Reason: PENDING
2024-12-07 02:24:29,832 Sleeping for 9s. Reason: RUNNING
2024-12-07 02:24:39,088 Sleeping for 8s. Reason: RUNNING
2024-12-07 02:24:47,349 Sleeping for 5s. Reason: RUNNING
2024-12-07 02:24:52,607 Sleeping for 6s. Reason: RUNNING
2024-12-07 02:24:58,870 Sleeping for 10s. Reason: RUNNING
2024-12-07 02:25:11,311 Setting max_seq=508, max_extra_seq=2048
2024-12-07 02:28:14,854 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=40.2 pTM=0.288 ipTM=0.183
2024-12-07 02:28:33,317 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=40.1 pTM=0.295 ipTM=0.222 tol=16.9
2024-12-07 02:28:51,897 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=40.8 pTM=0.286 ipTM=0.169 tol=10.5
2024-12-07 02:29:10,511 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=40.8 pTM=0.292 ipTM=0.212 tol=8.62
2024-12-07 02:29:29,182 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=41.2 pTM=0.292 ipTM=0.21 tol=6.87
2024-12-07 02:29:47,882 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=41.4 pTM=0.293 ipTM=0.231 tol=7.99
2024-12-07 02:30:06,609 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=41.5 pTM=0.295 ipTM=0.238 tol=7.27
2024-12-07 02:30:25,352 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=41.8 pTM=0.292 ipTM=0.202 tol=9.76
2024-12-07 02:30:44,111 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=41.9 pTM=0.295 ipTM=0.213 tol=9.14
2024-12-07 02:31:02,893 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=42 pTM=0.296 ipTM=0.218 tol=6.2
2024-12-07 02:31:21,679 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=42.1 pTM=0.298 ipTM=0.24 tol=5.91
2024-12-07 02:31:40,471 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=41.9 pTM=0.295 ipTM=0.219 tol=5.93
2024-12-07 02:31:59,241 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=41.9 pTM=0.298 ipTM=0.236 tol=4.74
2024-12-07 02:32:18,039 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=42.2 pTM=0.294 ipTM=0.2 tol=3.43
2024-12-07 02:32:36,844 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=42 pTM=0.289 ipTM=0.169 tol=8.39
2024-12-07 02:32:55,627 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=42.2 pTM=0.29 ipTM=0.158 tol=6.32
2024-12-07 02:33:14,432 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=42.3 pTM=0.29 ipTM=0.152 tol=3.34
2024-12-07 02:33:33,248 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=42.2 pTM=0.288 ipTM=0.147 tol=5.25
2024-12-07 02:33:52,064 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=42.1 pTM=0.287 ipTM=0.146 tol=5.09
2024-12-07 02:34:10,863 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=42.2 pTM=0.29 ipTM=0.148 tol=10.3
2024-12-07 02:34:29,661 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=42.2 pTM=0.288 ipTM=0.145 tol=8.62
2024-12-07 02:34:48,465 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=42.2 pTM=0.292 ipTM=0.18 tol=9.38
2024-12-07 02:35:07,252 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=41.9 pTM=0.29 ipTM=0.157 tol=7.3
2024-12-07 02:35:26,065 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=42.2 pTM=0.29 ipTM=0.147 tol=5.04
2024-12-07 02:35:44,876 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=42.2 pTM=0.291 ipTM=0.148 tol=6.33
2024-12-07 02:36:03,666 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=42 pTM=0.293 ipTM=0.163 tol=6.95
2024-12-07 02:36:22,459 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=42.1 pTM=0.292 ipTM=0.153 tol=4.61
2024-12-07 02:36:41,257 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=42 pTM=0.29 ipTM=0.15 tol=5.25
2024-12-07 02:37:00,074 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=42.1 pTM=0.292 ipTM=0.15 tol=3.59
2024-12-07 02:37:18,871 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=42 pTM=0.292 ipTM=0.151 tol=3.59
2024-12-07 02:37:37,643 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=42.2 pTM=0.296 ipTM=0.16 tol=4.87
2024-12-07 02:37:37,644 alphafold2_multimer_v3_model_1_seed_000 took 741.2s (30 recycles)
2024-12-07 02:37:56,886 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=40.2 pTM=0.292 ipTM=0.152
2024-12-07 02:38:15,669 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=41.5 pTM=0.292 ipTM=0.159 tol=18.7
2024-12-07 02:38:34,467 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=42.8 pTM=0.293 ipTM=0.195 tol=14.6
2024-12-07 02:38:53,257 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=42.8 pTM=0.294 ipTM=0.2 tol=8.1
2024-12-07 02:39:12,087 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=43.3 pTM=0.292 ipTM=0.186 tol=6.77
2024-12-07 02:39:30,917 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=43.5 pTM=0.291 ipTM=0.19 tol=7.5
2024-12-07 02:39:49,718 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=43.6 pTM=0.291 ipTM=0.193 tol=4.92
2024-12-07 02:40:08,545 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=43.3 pTM=0.291 ipTM=0.192 tol=8.05
2024-12-07 02:40:27,363 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=43.4 pTM=0.29 ipTM=0.195 tol=7.21
2024-12-07 02:40:46,180 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=43.4 pTM=0.291 ipTM=0.195 tol=4.34
2024-12-07 02:41:04,996 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=43.6 pTM=0.291 ipTM=0.195 tol=4.57
2024-12-07 02:41:23,807 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=43.6 pTM=0.291 ipTM=0.191 tol=7.94
2024-12-07 02:41:42,613 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=43.6 pTM=0.291 ipTM=0.186 tol=2.98
2024-12-07 02:42:01,410 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=43.8 pTM=0.292 ipTM=0.183 tol=3.29
2024-12-07 02:42:20,219 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=43.6 pTM=0.292 ipTM=0.183 tol=8.88
2024-12-07 02:42:39,032 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=43.4 pTM=0.292 ipTM=0.182 tol=5.12
2024-12-07 02:42:57,837 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=43.8 pTM=0.292 ipTM=0.186 tol=4.2
2024-12-07 02:43:16,642 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=43.8 pTM=0.292 ipTM=0.193 tol=8.5
2024-12-07 02:43:35,447 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=43.8 pTM=0.291 ipTM=0.194 tol=8.19
2024-12-07 02:43:54,257 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=43.8 pTM=0.292 ipTM=0.191 tol=3.82
2024-12-07 02:44:13,057 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=43.7 pTM=0.292 ipTM=0.185 tol=4.2
2024-12-07 02:44:31,864 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=43.8 pTM=0.292 ipTM=0.185 tol=4.88
2024-12-07 02:44:50,678 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=43.7 pTM=0.293 ipTM=0.191 tol=3.59
2024-12-07 02:45:09,471 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=43.7 pTM=0.292 ipTM=0.193 tol=3.59
2024-12-07 02:45:28,254 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=43.8 pTM=0.291 ipTM=0.193 tol=3.66
2024-12-07 02:45:47,061 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=43.5 pTM=0.291 ipTM=0.188 tol=3.64
2024-12-07 02:46:05,864 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=43.8 pTM=0.292 ipTM=0.186 tol=2.99
2024-12-07 02:46:24,642 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=43.5 pTM=0.291 ipTM=0.185 tol=2.97
2024-12-07 02:46:43,441 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=44 pTM=0.291 ipTM=0.191 tol=8.37
2024-12-07 02:47:02,238 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=43.8 pTM=0.29 ipTM=0.191 tol=11
2024-12-07 02:47:21,029 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=43.8 pTM=0.291 ipTM=0.189 tol=5.28
2024-12-07 02:47:21,030 alphafold2_multimer_v3_model_2_seed_000 took 582.9s (30 recycles)
2024-12-07 02:47:40,384 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=42.2 pTM=0.286 ipTM=0.158
2024-12-07 02:47:59,252 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=42.1 pTM=0.293 ipTM=0.181 tol=22
2024-12-07 02:48:18,138 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=42.2 pTM=0.288 ipTM=0.202 tol=11.6
2024-12-07 02:48:37,026 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=41.9 pTM=0.288 ipTM=0.194 tol=8.94
2024-12-07 02:48:55,914 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=42.1 pTM=0.29 ipTM=0.181 tol=6.71
2024-12-07 02:49:14,816 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=42 pTM=0.29 ipTM=0.182 tol=5.64
2024-12-07 02:49:33,726 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=42.1 pTM=0.289 ipTM=0.185 tol=5.82
2024-12-07 02:49:52,641 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=42 pTM=0.29 ipTM=0.185 tol=4.96
2024-12-07 02:50:11,520 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=41.8 pTM=0.291 ipTM=0.176 tol=7.63
2024-12-07 02:50:30,436 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=42 pTM=0.291 ipTM=0.169 tol=5.29
2024-12-07 02:50:49,356 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=42.1 pTM=0.289 ipTM=0.174 tol=4.24
2024-12-07 02:51:08,269 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=42.1 pTM=0.29 ipTM=0.174 tol=2.91
2024-12-07 02:51:27,185 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=41.8 pTM=0.291 ipTM=0.168 tol=4.81
2024-12-07 02:51:46,114 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=41.6 pTM=0.288 ipTM=0.162 tol=9.18
2024-12-07 02:52:05,022 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=41.6 pTM=0.291 ipTM=0.161 tol=8.41
2024-12-07 02:52:23,947 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=41.6 pTM=0.292 ipTM=0.154 tol=8.62
2024-12-07 02:52:42,894 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=41.8 pTM=0.292 ipTM=0.164 tol=9.99
2024-12-07 02:53:01,835 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=41.9 pTM=0.291 ipTM=0.172 tol=5.59
2024-12-07 02:53:20,758 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=42.2 pTM=0.292 ipTM=0.183 tol=5.87
2024-12-07 02:53:39,683 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=42.1 pTM=0.292 ipTM=0.187 tol=4.62
2024-12-07 02:53:58,600 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=42 pTM=0.292 ipTM=0.177 tol=3.44
2024-12-07 02:54:17,516 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=41.9 pTM=0.292 ipTM=0.175 tol=3.35
2024-12-07 02:54:36,443 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=41.9 pTM=0.292 ipTM=0.181 tol=3.45
2024-12-07 02:54:55,361 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=42.1 pTM=0.29 ipTM=0.187 tol=4.15
2024-12-07 02:55:14,283 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=42 pTM=0.292 ipTM=0.187 tol=5.25
2024-12-07 02:55:33,189 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=42 pTM=0.29 ipTM=0.184 tol=4.84
2024-12-07 02:55:52,096 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=41.9 pTM=0.289 ipTM=0.188 tol=8.45
2024-12-07 02:56:10,982 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=42.2 pTM=0.292 ipTM=0.189 tol=6.62
2024-12-07 02:56:29,844 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=42.1 pTM=0.29 ipTM=0.193 tol=5.61
2024-12-07 02:56:48,714 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=42.3 pTM=0.292 ipTM=0.191 tol=4.02
2024-12-07 02:57:07,579 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=42.3 pTM=0.29 ipTM=0.191 tol=3.14
2024-12-07 02:57:07,580 alphafold2_multimer_v3_model_3_seed_000 took 586.0s (30 recycles)
2024-12-07 02:57:26,838 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=39.6 pTM=0.303 ipTM=0.187
2024-12-07 02:57:45,569 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=40.6 pTM=0.307 ipTM=0.23 tol=13
2024-12-07 02:58:04,343 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=41 pTM=0.296 ipTM=0.157 tol=12.1
2024-12-07 02:58:23,139 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=41.1 pTM=0.295 ipTM=0.179 tol=12.2
2024-12-07 02:58:41,947 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=41.5 pTM=0.293 ipTM=0.153 tol=7.86
2024-12-07 02:59:00,777 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=41.6 pTM=0.286 ipTM=0.147 tol=7.12
2024-12-07 02:59:19,601 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=41.3 pTM=0.287 ipTM=0.151 tol=4.26
2024-12-07 02:59:38,423 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=41.2 pTM=0.286 ipTM=0.151 tol=4.15
2024-12-07 02:59:57,256 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=41 pTM=0.287 ipTM=0.153 tol=5.2
2024-12-07 03:00:16,102 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=41.2 pTM=0.287 ipTM=0.15 tol=4.21
2024-12-07 03:00:34,951 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=41.3 pTM=0.287 ipTM=0.149 tol=6.43
2024-12-07 03:00:53,789 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=41.3 pTM=0.29 ipTM=0.155 tol=6.38
2024-12-07 03:01:12,644 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=41.2 pTM=0.289 ipTM=0.156 tol=6.12
2024-12-07 03:01:31,460 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=41.3 pTM=0.293 ipTM=0.159 tol=4.23
2024-12-07 03:01:50,293 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=41.3 pTM=0.292 ipTM=0.155 tol=6.94
2024-12-07 03:02:09,137 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=41.3 pTM=0.292 ipTM=0.156 tol=6.32
2024-12-07 03:02:28,012 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=41.3 pTM=0.295 ipTM=0.159 tol=2.84
2024-12-07 03:02:46,864 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=41.3 pTM=0.293 ipTM=0.156 tol=3.69
2024-12-07 03:03:05,698 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=41.2 pTM=0.292 ipTM=0.154 tol=2.07
2024-12-07 03:03:24,544 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=41.2 pTM=0.293 ipTM=0.158 tol=6.98
2024-12-07 03:03:43,378 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=41.3 pTM=0.291 ipTM=0.149 tol=7.09
2024-12-07 03:04:02,193 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=41.3 pTM=0.295 ipTM=0.159 tol=6.36
2024-12-07 03:04:21,008 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=41.4 pTM=0.292 ipTM=0.156 tol=6.78
2024-12-07 03:04:39,821 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=41.2 pTM=0.292 ipTM=0.156 tol=2.88
2024-12-07 03:04:58,667 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=41.2 pTM=0.293 ipTM=0.158 tol=2.94
2024-12-07 03:05:17,504 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=41 pTM=0.292 ipTM=0.157 tol=7.07
2024-12-07 03:05:36,321 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=41.2 pTM=0.292 ipTM=0.155 tol=5.68
2024-12-07 03:05:55,174 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=41 pTM=0.293 ipTM=0.158 tol=2.86
2024-12-07 03:06:14,012 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=41.2 pTM=0.291 ipTM=0.154 tol=1.6
2024-12-07 03:06:32,841 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=41.2 pTM=0.293 ipTM=0.157 tol=2.11
2024-12-07 03:06:51,684 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=41.5 pTM=0.294 ipTM=0.153 tol=2.18
2024-12-07 03:06:51,685 alphafold2_multimer_v3_model_4_seed_000 took 583.6s (30 recycles)
2024-12-07 03:07:11,121 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=41 pTM=0.28 ipTM=0.145
2024-12-07 03:07:30,029 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=41.4 pTM=0.289 ipTM=0.141 tol=14.1
2024-12-07 03:07:48,958 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=41.8 pTM=0.295 ipTM=0.15 tol=11.9
2024-12-07 03:08:07,890 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=42.4 pTM=0.294 ipTM=0.152 tol=8.68
2024-12-07 03:08:26,836 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=42.5 pTM=0.293 ipTM=0.143 tol=8.64
2024-12-07 03:08:45,787 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=42.6 pTM=0.294 ipTM=0.151 tol=5.31
2024-12-07 03:09:04,736 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=42.3 pTM=0.295 ipTM=0.149 tol=7.5
2024-12-07 03:09:23,681 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=42.4 pTM=0.295 ipTM=0.151 tol=4.89
2024-12-07 03:09:42,621 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=42.3 pTM=0.295 ipTM=0.151 tol=7.15
2024-12-07 03:10:01,566 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=42.6 pTM=0.294 ipTM=0.151 tol=6.97
2024-12-07 03:10:20,549 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=42.6 pTM=0.297 ipTM=0.154 tol=8.41
2024-12-07 03:10:39,517 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=42.6 pTM=0.296 ipTM=0.152 tol=4.9
2024-12-07 03:10:58,504 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=42.6 pTM=0.297 ipTM=0.156 tol=5.5
2024-12-07 03:11:17,488 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=42.5 pTM=0.297 ipTM=0.16 tol=9.11
2024-12-07 03:11:36,484 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=42.5 pTM=0.296 ipTM=0.157 tol=9.18
2024-12-07 03:11:55,475 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=42.5 pTM=0.294 ipTM=0.156 tol=9.95
2024-12-07 03:12:14,471 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=42.6 pTM=0.298 ipTM=0.164 tol=10.4
2024-12-07 03:12:33,468 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=42.7 pTM=0.297 ipTM=0.163 tol=7.98
2024-12-07 03:12:52,466 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=42.5 pTM=0.297 ipTM=0.161 tol=7.59
2024-12-07 03:13:11,441 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=42.7 pTM=0.298 ipTM=0.166 tol=5.09
2024-12-07 03:13:30,403 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=42.8 pTM=0.298 ipTM=0.157 tol=6.7
2024-12-07 03:13:49,370 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=42.7 pTM=0.296 ipTM=0.167 tol=6.41
2024-12-07 03:14:08,336 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=42.8 pTM=0.297 ipTM=0.163 tol=7.86
2024-12-07 03:14:27,318 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=42.7 pTM=0.295 ipTM=0.161 tol=7.37
2024-12-07 03:14:46,282 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=42.7 pTM=0.297 ipTM=0.164 tol=8.13
2024-12-07 03:15:05,249 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=42.5 pTM=0.296 ipTM=0.161 tol=4.08
2024-12-07 03:15:24,221 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=42.8 pTM=0.295 ipTM=0.161 tol=8.83
2024-12-07 03:15:43,179 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=42.7 pTM=0.297 ipTM=0.178 tol=9.56
2024-12-07 03:16:02,151 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=42.7 pTM=0.298 ipTM=0.182 tol=6.89
2024-12-07 03:16:21,132 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=42.6 pTM=0.298 ipTM=0.167 tol=3.6
2024-12-07 03:16:40,113 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=42.7 pTM=0.298 ipTM=0.162 tol=5.03
2024-12-07 03:16:40,114 alphafold2_multimer_v3_model_5_seed_000 took 587.9s (30 recycles)
2024-12-07 03:16:40,624 reranking models by 'multimer' metric
2024-12-07 03:16:44,139 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 03:18:17,674 Relaxation took 97.1s
2024-12-07 03:18:17,674 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=42.3 pTM=0.29 ipTM=0.191
2024-12-07 03:20:23,274 Relaxation took 125.6s
2024-12-07 03:20:23,274 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=43.8 pTM=0.291 ipTM=0.189
2024-12-07 03:21:30,024 Relaxation took 66.7s
2024-12-07 03:21:30,024 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=42.7 pTM=0.298 ipTM=0.162
2024-12-07 03:22:42,894 Relaxation took 72.9s
2024-12-07 03:22:42,895 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=42.2 pTM=0.296 ipTM=0.16
2024-12-07 03:24:22,491 Relaxation took 99.6s
2024-12-07 03:24:22,492 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=41.5 pTM=0.294 ipTM=0.153
2024-12-07 03:24:24,144 Done