2024-12-07 02:27:11,291 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 02:27:11,588 Running on GPU
2024-12-07 02:27:13,362 Found 6 citations for tools or databases
2024-12-07 02:27:13,362 Query 1/1: MDM4_TP73 (length 1126)
2024-12-07 02:27:13,645 Sleeping for 9s. Reason: PENDING
2024-12-07 02:27:22,906 Sleeping for 5s. Reason: RUNNING
2024-12-07 02:27:28,157 Sleeping for 5s. Reason: RUNNING
2024-12-07 02:27:33,413 Sleeping for 8s. Reason: RUNNING
2024-12-07 02:27:41,674 Sleeping for 5s. Reason: RUNNING
2024-12-07 02:27:46,935 Sleeping for 7s. Reason: RUNNING
2024-12-07 02:27:54,191 Sleeping for 6s. Reason: RUNNING
2024-12-07 02:28:00,443 Sleeping for 5s. Reason: RUNNING
2024-12-07 02:28:05,701 Sleeping for 5s. Reason: RUNNING
2024-12-07 02:28:10,961 Sleeping for 9s. Reason: RUNNING
2024-12-07 02:28:20,215 Sleeping for 6s. Reason: RUNNING
2024-12-07 02:28:26,465 Sleeping for 6s. Reason: RUNNING
2024-12-07 02:28:32,717 Sleeping for 9s. Reason: RUNNING
2024-12-07 02:28:41,978 Sleeping for 5s. Reason: RUNNING
2024-12-07 02:28:48,655 Sleeping for 10s. Reason: PENDING
2024-12-07 02:28:58,916 Sleeping for 5s. Reason: RUNNING
2024-12-07 02:29:04,167 Sleeping for 7s. Reason: RUNNING
2024-12-07 02:29:11,432 Sleeping for 9s. Reason: RUNNING
2024-12-07 02:29:20,691 Sleeping for 6s. Reason: RUNNING
2024-12-07 02:29:26,952 Sleeping for 6s. Reason: RUNNING
2024-12-07 02:29:33,208 Sleeping for 6s. Reason: RUNNING
2024-12-07 02:29:41,569 Setting max_seq=508, max_extra_seq=2048
2024-12-07 02:32:34,747 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=41 pTM=0.319 ipTM=0.202
2024-12-07 02:33:04,350 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=42 pTM=0.304 ipTM=0.194 tol=13.5
2024-12-07 02:33:34,100 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=42.9 pTM=0.307 ipTM=0.2 tol=10
2024-12-07 02:34:03,952 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=43.5 pTM=0.306 ipTM=0.192 tol=6.42
2024-12-07 02:34:33,819 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=43.4 pTM=0.309 ipTM=0.208 tol=6.4
2024-12-07 02:35:03,735 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=43.6 pTM=0.309 ipTM=0.213 tol=7.41
2024-12-07 02:35:33,677 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=44.2 pTM=0.312 ipTM=0.293 tol=6.05
2024-12-07 02:36:03,638 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=45.2 pTM=0.309 ipTM=0.301 tol=5.33
2024-12-07 02:36:33,613 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=45.5 pTM=0.311 ipTM=0.3 tol=3.67
2024-12-07 02:37:03,587 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=45.4 pTM=0.307 ipTM=0.299 tol=3.96
2024-12-07 02:37:33,575 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=45.5 pTM=0.309 ipTM=0.299 tol=3.87
2024-12-07 02:38:03,551 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=45.4 pTM=0.307 ipTM=0.299 tol=3.21
2024-12-07 02:38:33,538 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=45.4 pTM=0.309 ipTM=0.299 tol=4.16
2024-12-07 02:39:03,517 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=45.3 pTM=0.307 ipTM=0.3 tol=3.22
2024-12-07 02:39:33,486 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=45.6 pTM=0.31 ipTM=0.3 tol=3.37
2024-12-07 02:40:03,450 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=45.6 pTM=0.308 ipTM=0.299 tol=3.1
2024-12-07 02:40:33,401 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=45.5 pTM=0.309 ipTM=0.3 tol=3.23
2024-12-07 02:41:03,362 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=45.6 pTM=0.308 ipTM=0.3 tol=1.33
2024-12-07 02:41:33,314 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=45.4 pTM=0.309 ipTM=0.299 tol=4.35
2024-12-07 02:42:03,260 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=45.6 pTM=0.309 ipTM=0.299 tol=3.96
2024-12-07 02:42:33,210 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=45.7 pTM=0.31 ipTM=0.299 tol=1.28
2024-12-07 02:43:03,163 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=45.7 pTM=0.309 ipTM=0.299 tol=3.22
2024-12-07 02:43:33,119 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=45.7 pTM=0.309 ipTM=0.299 tol=3.13
2024-12-07 02:44:03,083 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=45.6 pTM=0.308 ipTM=0.299 tol=2.78
2024-12-07 02:44:33,041 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=45.5 pTM=0.31 ipTM=0.299 tol=1.36
2024-12-07 02:45:03,027 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=45.7 pTM=0.309 ipTM=0.298 tol=1.26
2024-12-07 02:45:33,004 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=45.7 pTM=0.311 ipTM=0.298 tol=3.11
2024-12-07 02:46:02,987 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=45.6 pTM=0.308 ipTM=0.299 tol=3.39
2024-12-07 02:46:32,941 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=45.8 pTM=0.311 ipTM=0.299 tol=3.92
2024-12-07 02:47:02,912 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=45.5 pTM=0.307 ipTM=0.299 tol=3.71
2024-12-07 02:47:32,877 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=45.7 pTM=0.311 ipTM=0.298 tol=3.91
2024-12-07 02:47:32,878 alphafold2_multimer_v3_model_1_seed_000 took 1067.2s (30 recycles)
2024-12-07 02:48:03,605 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=43.2 pTM=0.302 ipTM=0.269
2024-12-07 02:48:33,656 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=46.9 pTM=0.306 ipTM=0.302 tol=16.3
2024-12-07 02:49:03,710 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=47.4 pTM=0.312 ipTM=0.298 tol=10.5
2024-12-07 02:49:33,769 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=47.4 pTM=0.308 ipTM=0.298 tol=7.09
2024-12-07 02:50:03,848 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=47.4 pTM=0.309 ipTM=0.298 tol=5.74
2024-12-07 02:50:33,921 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=47.3 pTM=0.306 ipTM=0.298 tol=3.51
2024-12-07 02:51:03,984 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=47.4 pTM=0.307 ipTM=0.3 tol=2.36
2024-12-07 02:51:34,070 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=47.6 pTM=0.306 ipTM=0.299 tol=3.91
2024-12-07 02:52:04,139 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=47.6 pTM=0.305 ipTM=0.299 tol=3.61
2024-12-07 02:52:34,218 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=47.5 pTM=0.305 ipTM=0.299 tol=3.06
2024-12-07 02:53:04,282 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=47.6 pTM=0.305 ipTM=0.299 tol=2.57
2024-12-07 02:53:34,365 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=47.6 pTM=0.305 ipTM=0.3 tol=4.08
2024-12-07 02:54:04,447 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=47.6 pTM=0.303 ipTM=0.299 tol=3.96
2024-12-07 02:54:34,555 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=47.8 pTM=0.306 ipTM=0.299 tol=1.85
2024-12-07 02:55:04,639 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=47.8 pTM=0.307 ipTM=0.3 tol=2.36
2024-12-07 02:55:34,744 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=47.9 pTM=0.307 ipTM=0.299 tol=2
2024-12-07 02:56:04,876 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=47.8 pTM=0.304 ipTM=0.299 tol=2.19
2024-12-07 02:56:35,009 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=47.7 pTM=0.306 ipTM=0.299 tol=2.08
2024-12-07 02:57:05,119 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=47.8 pTM=0.305 ipTM=0.299 tol=2.17
2024-12-07 02:57:35,209 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=47.7 pTM=0.306 ipTM=0.3 tol=5.83
2024-12-07 02:58:05,300 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=47.8 pTM=0.304 ipTM=0.299 tol=2.08
2024-12-07 02:58:35,389 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=47.8 pTM=0.305 ipTM=0.299 tol=2.56
2024-12-07 02:59:05,468 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=47.8 pTM=0.304 ipTM=0.299 tol=5.84
2024-12-07 02:59:35,558 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=47.8 pTM=0.307 ipTM=0.3 tol=2.56
2024-12-07 03:00:05,633 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=47.7 pTM=0.305 ipTM=0.3 tol=2.24
2024-12-07 03:00:35,718 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=47.7 pTM=0.307 ipTM=0.299 tol=2.54
2024-12-07 03:01:05,801 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=47.8 pTM=0.305 ipTM=0.299 tol=6.21
2024-12-07 03:01:35,877 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=47.7 pTM=0.305 ipTM=0.298 tol=6.59
2024-12-07 03:02:05,968 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=47.7 pTM=0.303 ipTM=0.299 tol=2.67
2024-12-07 03:02:36,060 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=47.6 pTM=0.305 ipTM=0.299 tol=2.62
2024-12-07 03:03:06,146 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=47.7 pTM=0.305 ipTM=0.299 tol=2.29
2024-12-07 03:03:06,147 alphafold2_multimer_v3_model_2_seed_000 took 932.5s (30 recycles)
2024-12-07 03:03:37,114 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=42.7 pTM=0.296 ipTM=0.215
2024-12-07 03:04:07,363 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=44.5 pTM=0.303 ipTM=0.3 tol=14.1
2024-12-07 03:04:37,592 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=44.6 pTM=0.299 ipTM=0.295 tol=12
2024-12-07 03:05:07,811 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=44.8 pTM=0.3 ipTM=0.297 tol=7.51
2024-12-07 03:05:38,032 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=45.1 pTM=0.305 ipTM=0.297 tol=8.5
2024-12-07 03:06:08,242 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=44.8 pTM=0.303 ipTM=0.298 tol=4.67
2024-12-07 03:06:38,435 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=45.1 pTM=0.307 ipTM=0.3 tol=4.75
2024-12-07 03:07:08,635 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=45.2 pTM=0.305 ipTM=0.297 tol=6.07
2024-12-07 03:07:38,833 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=45.1 pTM=0.304 ipTM=0.299 tol=7.15
2024-12-07 03:08:09,022 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=45.4 pTM=0.305 ipTM=0.299 tol=4.67
2024-12-07 03:08:39,231 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=45.2 pTM=0.303 ipTM=0.3 tol=3.45
2024-12-07 03:09:09,435 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=45.2 pTM=0.306 ipTM=0.3 tol=4.95
2024-12-07 03:09:39,628 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=45.3 pTM=0.304 ipTM=0.299 tol=4.95
2024-12-07 03:10:09,832 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=45.2 pTM=0.306 ipTM=0.3 tol=5.93
2024-12-07 03:10:40,015 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=45.2 pTM=0.303 ipTM=0.3 tol=6.87
2024-12-07 03:11:10,217 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=45.4 pTM=0.308 ipTM=0.3 tol=6.94
2024-12-07 03:11:40,435 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=45.4 pTM=0.305 ipTM=0.3 tol=6.82
2024-12-07 03:12:10,630 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=45.4 pTM=0.307 ipTM=0.301 tol=3.97
2024-12-07 03:12:40,836 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=45.3 pTM=0.304 ipTM=0.299 tol=2.7
2024-12-07 03:13:11,025 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=45.4 pTM=0.307 ipTM=0.301 tol=2.83
2024-12-07 03:13:41,219 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=45.4 pTM=0.306 ipTM=0.3 tol=2.5
2024-12-07 03:14:11,406 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=45.5 pTM=0.308 ipTM=0.3 tol=1.98
2024-12-07 03:14:41,626 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=45.5 pTM=0.303 ipTM=0.299 tol=2.52
2024-12-07 03:15:11,840 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=45.4 pTM=0.305 ipTM=0.299 tol=2
2024-12-07 03:15:42,022 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=45.5 pTM=0.309 ipTM=0.299 tol=2.84
2024-12-07 03:16:12,247 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=45.7 pTM=0.305 ipTM=0.298 tol=2.37
2024-12-07 03:16:42,432 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=45.6 pTM=0.311 ipTM=0.299 tol=1.81
2024-12-07 03:17:12,647 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=45.6 pTM=0.305 ipTM=0.298 tol=2.1
2024-12-07 03:17:42,878 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=45.5 pTM=0.305 ipTM=0.3 tol=3
2024-12-07 03:18:13,096 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=45.5 pTM=0.307 ipTM=0.3 tol=2.92
2024-12-07 03:18:43,336 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=45.6 pTM=0.308 ipTM=0.3 tol=1.84
2024-12-07 03:18:43,337 alphafold2_multimer_v3_model_3_seed_000 took 936.4s (30 recycles)
2024-12-07 03:19:14,249 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=41.8 pTM=0.302 ipTM=0.263
2024-12-07 03:19:44,429 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=44.3 pTM=0.308 ipTM=0.308 tol=14.6
2024-12-07 03:20:14,641 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=44.9 pTM=0.296 ipTM=0.301 tol=10.4
2024-12-07 03:20:44,850 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=45.5 pTM=0.313 ipTM=0.3 tol=6.75
2024-12-07 03:21:15,058 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=45 pTM=0.301 ipTM=0.3 tol=6.16
2024-12-07 03:21:45,273 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=44.7 pTM=0.303 ipTM=0.299 tol=5.16
2024-12-07 03:22:15,485 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=45.2 pTM=0.313 ipTM=0.297 tol=4.64
2024-12-07 03:22:45,695 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=45.4 pTM=0.305 ipTM=0.295 tol=5.58
2024-12-07 03:23:15,918 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=45.2 pTM=0.307 ipTM=0.295 tol=4.08
2024-12-07 03:23:46,135 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=45.1 pTM=0.302 ipTM=0.294 tol=3.88
2024-12-07 03:24:16,388 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=44.9 pTM=0.303 ipTM=0.294 tol=4.64
2024-12-07 03:24:46,591 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=44.8 pTM=0.305 ipTM=0.294 tol=5.08
2024-12-07 03:25:16,803 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=45.1 pTM=0.302 ipTM=0.294 tol=4.37
2024-12-07 03:25:47,000 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=44.9 pTM=0.303 ipTM=0.294 tol=3.01
2024-12-07 03:26:17,190 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=44.9 pTM=0.304 ipTM=0.295 tol=3.08
2024-12-07 03:26:47,360 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=45 pTM=0.304 ipTM=0.294 tol=4.72
2024-12-07 03:27:17,551 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=44.8 pTM=0.304 ipTM=0.295 tol=4.04
2024-12-07 03:27:47,762 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=44.9 pTM=0.303 ipTM=0.294 tol=3.05
2024-12-07 03:28:17,950 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=45 pTM=0.306 ipTM=0.294 tol=3.77
2024-12-07 03:28:48,174 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=45 pTM=0.303 ipTM=0.293 tol=4.3
2024-12-07 03:29:18,374 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=45 pTM=0.309 ipTM=0.294 tol=4.66
2024-12-07 03:29:48,574 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=45.1 pTM=0.304 ipTM=0.294 tol=4.75
2024-12-07 03:30:18,794 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=45.1 pTM=0.303 ipTM=0.292 tol=2.81
2024-12-07 03:30:48,996 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=45 pTM=0.308 ipTM=0.293 tol=2.93
2024-12-07 03:31:19,201 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=44.8 pTM=0.304 ipTM=0.292 tol=2.06
2024-12-07 03:31:49,379 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=45.2 pTM=0.31 ipTM=0.292 tol=3.38
2024-12-07 03:32:19,571 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=44.8 pTM=0.305 ipTM=0.293 tol=4.71
2024-12-07 03:32:49,773 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=45 pTM=0.307 ipTM=0.294 tol=2.17
2024-12-07 03:33:19,973 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=45 pTM=0.306 ipTM=0.295 tol=2.58
2024-12-07 03:33:50,149 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=44.9 pTM=0.31 ipTM=0.295 tol=2.25
2024-12-07 03:34:20,351 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=45.1 pTM=0.303 ipTM=0.294 tol=2.53
2024-12-07 03:34:20,352 alphafold2_multimer_v3_model_4_seed_000 took 936.2s (30 recycles)
2024-12-07 03:34:51,423 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=42.8 pTM=0.293 ipTM=0.167
2024-12-07 03:35:21,710 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=43.8 pTM=0.301 ipTM=0.168 tol=11.4
2024-12-07 03:35:51,995 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=43.7 pTM=0.305 ipTM=0.178 tol=9.02
2024-12-07 03:36:22,305 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=44 pTM=0.301 ipTM=0.16 tol=6.96
2024-12-07 03:36:52,570 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=44.1 pTM=0.302 ipTM=0.161 tol=6.79
2024-12-07 03:37:22,861 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=44.4 pTM=0.304 ipTM=0.166 tol=6.3
2024-12-07 03:37:53,135 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=44.3 pTM=0.304 ipTM=0.165 tol=5.57
2024-12-07 03:38:23,401 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=44.3 pTM=0.305 ipTM=0.166 tol=3.25
2024-12-07 03:38:53,667 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=44.2 pTM=0.313 ipTM=0.216 tol=4.11
2024-12-07 03:39:23,912 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=44 pTM=0.306 ipTM=0.167 tol=3.18
2024-12-07 03:39:54,200 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=44 pTM=0.302 ipTM=0.16 tol=5.33
2024-12-07 03:40:24,460 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=44.4 pTM=0.303 ipTM=0.164 tol=4.01
2024-12-07 03:40:54,715 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=44.3 pTM=0.303 ipTM=0.163 tol=3.22
2024-12-07 03:41:24,995 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=44.3 pTM=0.308 ipTM=0.186 tol=7.15
2024-12-07 03:41:55,255 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=44.2 pTM=0.304 ipTM=0.165 tol=8.46
2024-12-07 03:42:25,538 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=44.5 pTM=0.303 ipTM=0.167 tol=6.46
2024-12-07 03:42:55,854 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=44.3 pTM=0.302 ipTM=0.165 tol=4.4
2024-12-07 03:43:26,146 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=44.5 pTM=0.304 ipTM=0.164 tol=4.02
2024-12-07 03:43:56,441 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=44.4 pTM=0.303 ipTM=0.162 tol=4.11
2024-12-07 03:44:26,716 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=44.5 pTM=0.302 ipTM=0.161 tol=6.08
2024-12-07 03:44:56,964 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=44.5 pTM=0.302 ipTM=0.158 tol=5.34
2024-12-07 03:45:27,222 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=44.4 pTM=0.302 ipTM=0.159 tol=7.21
2024-12-07 03:45:57,502 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=44.8 pTM=0.301 ipTM=0.173 tol=6.02
2024-12-07 03:46:27,789 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=44.7 pTM=0.302 ipTM=0.163 tol=9.38
2024-12-07 03:46:58,065 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=44.5 pTM=0.303 ipTM=0.184 tol=6.14
2024-12-07 03:47:28,333 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=44.7 pTM=0.302 ipTM=0.175 tol=5.59
2024-12-07 03:47:58,596 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=44.7 pTM=0.303 ipTM=0.192 tol=6.44
2024-12-07 03:48:28,871 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=44.8 pTM=0.301 ipTM=0.17 tol=4.08
2024-12-07 03:48:59,138 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=44.8 pTM=0.305 ipTM=0.206 tol=3.98
2024-12-07 03:49:29,422 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=44.9 pTM=0.302 ipTM=0.17 tol=6.66
2024-12-07 03:49:59,726 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=44.3 pTM=0.302 ipTM=0.161 tol=7.74
2024-12-07 03:49:59,727 alphafold2_multimer_v3_model_5_seed_000 took 938.6s (30 recycles)
2024-12-07 03:50:00,510 reranking models by 'multimer' metric
2024-12-07 03:50:03,985 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 03:51:35,751 Relaxation took 95.2s
2024-12-07 03:51:35,751 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=45.6 pTM=0.308 ipTM=0.3
2024-12-07 03:53:48,540 Relaxation took 132.8s
2024-12-07 03:53:48,541 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=45.7 pTM=0.311 ipTM=0.298
2024-12-07 03:55:26,277 Relaxation took 97.7s
2024-12-07 03:55:26,277 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=47.7 pTM=0.305 ipTM=0.299
2024-12-07 04:07:53,536 Relaxation took 747.3s
2024-12-07 04:07:53,537 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=45.1 pTM=0.303 ipTM=0.294
2024-12-07 04:09:31,191 Relaxation took 97.7s
2024-12-07 04:09:31,192 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=44.3 pTM=0.302 ipTM=0.161
2024-12-07 04:09:33,305 Done