2024-12-07 02:28:31,410 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 02:28:31,724 Running on GPU
2024-12-07 02:28:34,404 Found 6 citations for tools or databases
2024-12-07 02:28:34,404 Query 1/1: MED8_MED10 (length 403)
2024-12-07 02:28:34,687 Sleeping for 10s. Reason: PENDING
2024-12-07 02:28:44,955 Sleeping for 8s. Reason: RUNNING
2024-12-07 02:28:53,210 Sleeping for 6s. Reason: RUNNING
2024-12-07 02:28:59,468 Sleeping for 7s. Reason: RUNNING
2024-12-07 02:29:06,724 Sleeping for 7s. Reason: RUNNING
2024-12-07 02:29:15,125 Sleeping for 7s. Reason: PENDING
2024-12-07 02:29:22,380 Sleeping for 5s. Reason: RUNNING
2024-12-07 02:29:27,635 Sleeping for 9s. Reason: RUNNING
2024-12-07 02:29:37,979 Setting max_seq=508, max_extra_seq=2048
2024-12-07 02:32:20,154 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=51.8 pTM=0.273 ipTM=0.171
2024-12-07 02:32:24,071 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=53.8 pTM=0.252 ipTM=0.0941 tol=13.9
2024-12-07 02:32:27,987 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59.3 pTM=0.265 ipTM=0.102 tol=17.2
2024-12-07 02:32:31,905 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=57.3 pTM=0.241 ipTM=0.0713 tol=9.91
2024-12-07 02:32:35,823 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=58.8 pTM=0.257 ipTM=0.08 tol=11.2
2024-12-07 02:32:39,738 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=57.9 pTM=0.242 ipTM=0.0778 tol=7.67
2024-12-07 02:32:43,656 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59.6 pTM=0.25 ipTM=0.0769 tol=6.09
2024-12-07 02:32:47,577 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=58.9 pTM=0.243 ipTM=0.0809 tol=5.34
2024-12-07 02:32:51,501 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=60.5 pTM=0.258 ipTM=0.076 tol=6
2024-12-07 02:32:55,423 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=58.2 pTM=0.243 ipTM=0.0786 tol=5.64
2024-12-07 02:32:59,343 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=58.3 pTM=0.26 ipTM=0.14 tol=7.93
2024-12-07 02:33:03,266 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.6 pTM=0.249 ipTM=0.0931 tol=7.78
2024-12-07 02:33:07,187 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=57.4 pTM=0.251 ipTM=0.111 tol=5.35
2024-12-07 02:33:11,113 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.9 pTM=0.242 ipTM=0.0782 tol=5.88
2024-12-07 02:33:15,041 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=56.9 pTM=0.243 ipTM=0.0754 tol=5.04
2024-12-07 02:33:18,972 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=59.1 pTM=0.254 ipTM=0.0754 tol=5.25
2024-12-07 02:33:22,902 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=58.2 pTM=0.26 ipTM=0.0828 tol=5.95
2024-12-07 02:33:26,831 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=56.9 pTM=0.249 ipTM=0.0841 tol=10
2024-12-07 02:33:30,757 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=57.6 pTM=0.25 ipTM=0.0873 tol=10.8
2024-12-07 02:33:34,684 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=57.1 pTM=0.254 ipTM=0.0861 tol=8.62
2024-12-07 02:33:38,610 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=58.6 pTM=0.252 ipTM=0.0834 tol=6.1
2024-12-07 02:33:42,540 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=58.6 pTM=0.261 ipTM=0.0807 tol=7.57
2024-12-07 02:33:46,468 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=57.1 pTM=0.252 ipTM=0.0867 tol=6.04
2024-12-07 02:33:50,397 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=56.1 pTM=0.25 ipTM=0.0991 tol=4.8
2024-12-07 02:33:54,329 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=58 pTM=0.256 ipTM=0.089 tol=5.14
2024-12-07 02:33:58,258 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=57.4 pTM=0.248 ipTM=0.0752 tol=7.42
2024-12-07 02:34:02,186 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=58.1 pTM=0.257 ipTM=0.0775 tol=9.21
2024-12-07 02:34:06,118 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=58.4 pTM=0.254 ipTM=0.0772 tol=7.27
2024-12-07 02:34:10,049 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=59.4 pTM=0.259 ipTM=0.0782 tol=5.46
2024-12-07 02:34:13,983 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=58.1 pTM=0.249 ipTM=0.0823 tol=4.6
2024-12-07 02:34:17,909 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=57.2 pTM=0.248 ipTM=0.103 tol=4.43
2024-12-07 02:34:17,910 alphafold2_multimer_v3_model_1_seed_000 took 275.1s (30 recycles)
2024-12-07 02:34:21,965 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=49.2 pTM=0.254 ipTM=0.157
2024-12-07 02:34:25,888 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=56.5 pTM=0.313 ipTM=0.24 tol=11.3
2024-12-07 02:34:29,812 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=56.4 pTM=0.271 ipTM=0.132 tol=5.61
2024-12-07 02:34:33,741 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=55.5 pTM=0.256 ipTM=0.1 tol=17
2024-12-07 02:34:37,657 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=56.5 pTM=0.27 ipTM=0.134 tol=12.8
2024-12-07 02:34:41,582 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=56 pTM=0.262 ipTM=0.0944 tol=15.8
2024-12-07 02:34:45,499 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=54.3 pTM=0.267 ipTM=0.123 tol=7.89
2024-12-07 02:34:49,415 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=55.8 pTM=0.268 ipTM=0.153 tol=6.62
2024-12-07 02:34:53,341 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=56.8 pTM=0.271 ipTM=0.0879 tol=7.29
2024-12-07 02:34:57,267 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=56.1 pTM=0.263 ipTM=0.0805 tol=4.35
2024-12-07 02:35:01,186 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=57.8 pTM=0.318 ipTM=0.237 tol=8.9
2024-12-07 02:35:05,113 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=56.2 pTM=0.263 ipTM=0.0922 tol=14
2024-12-07 02:35:09,038 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=54.9 pTM=0.252 ipTM=0.103 tol=8.28
2024-12-07 02:35:12,965 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=55.4 pTM=0.267 ipTM=0.125 tol=9.53
2024-12-07 02:35:16,895 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=55.7 pTM=0.268 ipTM=0.142 tol=5.36
2024-12-07 02:35:20,827 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=55.9 pTM=0.263 ipTM=0.0926 tol=11.5
2024-12-07 02:35:24,751 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=57.8 pTM=0.281 ipTM=0.151 tol=8.91
2024-12-07 02:35:28,680 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=56.1 pTM=0.265 ipTM=0.101 tol=12.5
2024-12-07 02:35:32,610 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=57.2 pTM=0.26 ipTM=0.0867 tol=6.11
2024-12-07 02:35:36,533 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=56.2 pTM=0.279 ipTM=0.149 tol=13.2
2024-12-07 02:35:40,464 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=56.2 pTM=0.262 ipTM=0.0791 tol=11.6
2024-12-07 02:35:44,396 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=56.3 pTM=0.266 ipTM=0.0778 tol=4.65
2024-12-07 02:35:48,324 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=55.5 pTM=0.258 ipTM=0.0887 tol=7.52
2024-12-07 02:35:52,248 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=54.5 pTM=0.261 ipTM=0.108 tol=12.3
2024-12-07 02:35:56,174 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=56.1 pTM=0.275 ipTM=0.171 tol=14.4
2024-12-07 02:36:00,103 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=56.4 pTM=0.267 ipTM=0.0813 tol=11.2
2024-12-07 02:36:04,031 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=56 pTM=0.26 ipTM=0.0776 tol=6.88
2024-12-07 02:36:07,953 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=55.9 pTM=0.274 ipTM=0.136 tol=8.45
2024-12-07 02:36:11,880 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=55.7 pTM=0.263 ipTM=0.107 tol=5.77
2024-12-07 02:36:15,803 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=57.1 pTM=0.288 ipTM=0.165 tol=4.9
2024-12-07 02:36:19,727 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=55.6 pTM=0.262 ipTM=0.0908 tol=7.1
2024-12-07 02:36:19,728 alphafold2_multimer_v3_model_2_seed_000 took 121.7s (30 recycles)
2024-12-07 02:36:23,799 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=48.8 pTM=0.244 ipTM=0.0908
2024-12-07 02:36:27,736 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=54.1 pTM=0.25 ipTM=0.0939 tol=9.84
2024-12-07 02:36:31,677 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=54.5 pTM=0.267 ipTM=0.0984 tol=13.5
2024-12-07 02:36:35,615 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=56.1 pTM=0.295 ipTM=0.144 tol=14.6
2024-12-07 02:36:39,547 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=56.5 pTM=0.28 ipTM=0.107 tol=16.9
2024-12-07 02:36:43,481 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=56.8 pTM=0.328 ipTM=0.252 tol=7.73
2024-12-07 02:36:47,413 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=56.7 pTM=0.275 ipTM=0.111 tol=11.5
2024-12-07 02:36:51,350 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=56.8 pTM=0.316 ipTM=0.224 tol=14.1
2024-12-07 02:36:55,278 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=56.9 pTM=0.277 ipTM=0.108 tol=21.5
2024-12-07 02:36:59,210 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=56.3 pTM=0.314 ipTM=0.231 tol=21.6
2024-12-07 02:37:03,137 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=56 pTM=0.275 ipTM=0.118 tol=19.6
2024-12-07 02:37:07,073 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=56.5 pTM=0.295 ipTM=0.175 tol=16.9
2024-12-07 02:37:10,996 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=55.3 pTM=0.27 ipTM=0.122 tol=16.7
2024-12-07 02:37:14,927 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54.8 pTM=0.292 ipTM=0.167 tol=16.4
2024-12-07 02:37:18,854 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54.8 pTM=0.267 ipTM=0.1 tol=17.8
2024-12-07 02:37:22,785 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=56.2 pTM=0.314 ipTM=0.225 tol=20.2
2024-12-07 02:37:26,714 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=55.6 pTM=0.269 ipTM=0.102 tol=18
2024-12-07 02:37:30,641 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=54.7 pTM=0.263 ipTM=0.0898 tol=8.77
2024-12-07 02:37:34,573 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=52.7 pTM=0.259 ipTM=0.0891 tol=5.29
2024-12-07 02:37:38,512 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.8 pTM=0.273 ipTM=0.101 tol=16.7
2024-12-07 02:37:42,445 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=56.3 pTM=0.296 ipTM=0.168 tol=7.41
2024-12-07 02:37:46,372 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=55.8 pTM=0.266 ipTM=0.116 tol=11.5
2024-12-07 02:37:50,305 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=56.6 pTM=0.281 ipTM=0.134 tol=13.6
2024-12-07 02:37:54,234 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=55 pTM=0.27 ipTM=0.112 tol=15
2024-12-07 02:37:58,173 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=55.8 pTM=0.269 ipTM=0.1 tol=12.9
2024-12-07 02:38:02,106 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=55.2 pTM=0.266 ipTM=0.0995 tol=12.9
2024-12-07 02:38:06,044 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=55.3 pTM=0.272 ipTM=0.118 tol=14.1
2024-12-07 02:38:09,976 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=55.2 pTM=0.267 ipTM=0.105 tol=15.5
2024-12-07 02:38:13,909 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=55.1 pTM=0.278 ipTM=0.103 tol=9.27
2024-12-07 02:38:17,843 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=55.6 pTM=0.27 ipTM=0.108 tol=10.1
2024-12-07 02:38:21,775 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=55.9 pTM=0.291 ipTM=0.139 tol=18.3
2024-12-07 02:38:21,775 alphafold2_multimer_v3_model_3_seed_000 took 121.9s (30 recycles)
2024-12-07 02:38:25,821 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=49.2 pTM=0.255 ipTM=0.124
2024-12-07 02:38:29,754 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=55.3 pTM=0.259 ipTM=0.103 tol=8.79
2024-12-07 02:38:33,687 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=54.9 pTM=0.266 ipTM=0.11 tol=7.41
2024-12-07 02:38:37,624 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=58.1 pTM=0.257 ipTM=0.0841 tol=10.4
2024-12-07 02:38:41,552 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=56.4 pTM=0.256 ipTM=0.0797 tol=6.18
2024-12-07 02:38:45,483 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57.1 pTM=0.26 ipTM=0.0843 tol=5.19
2024-12-07 02:38:49,411 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=55 pTM=0.263 ipTM=0.0901 tol=8.61
2024-12-07 02:38:53,346 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=55.9 pTM=0.258 ipTM=0.0809 tol=6.88
2024-12-07 02:38:57,275 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=56.5 pTM=0.262 ipTM=0.0878 tol=10.3
2024-12-07 02:39:01,203 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=56.2 pTM=0.26 ipTM=0.0932 tol=3.34
2024-12-07 02:39:05,128 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=55.3 pTM=0.26 ipTM=0.0922 tol=2.95
2024-12-07 02:39:09,053 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=54.7 pTM=0.256 ipTM=0.0952 tol=3.16
2024-12-07 02:39:12,986 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=53.8 pTM=0.26 ipTM=0.0965 tol=10.7
2024-12-07 02:39:16,922 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=52.9 pTM=0.265 ipTM=0.102 tol=5.7
2024-12-07 02:39:20,849 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=53.3 pTM=0.261 ipTM=0.0925 tol=4.3
2024-12-07 02:39:24,776 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=54.5 pTM=0.262 ipTM=0.0868 tol=6.17
2024-12-07 02:39:28,702 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=54 pTM=0.267 ipTM=0.0959 tol=11.8
2024-12-07 02:39:32,626 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=55.8 pTM=0.264 ipTM=0.0903 tol=8.21
2024-12-07 02:39:36,558 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=54 pTM=0.274 ipTM=0.103 tol=7.96
2024-12-07 02:39:40,490 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=55.1 pTM=0.271 ipTM=0.114 tol=4.92
2024-12-07 02:39:44,425 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=54.9 pTM=0.265 ipTM=0.0904 tol=5.47
2024-12-07 02:39:48,350 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=54.3 pTM=0.272 ipTM=0.125 tol=6.36
2024-12-07 02:39:52,283 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=55.2 pTM=0.257 ipTM=0.0889 tol=13.9
2024-12-07 02:39:56,214 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=54.4 pTM=0.267 ipTM=0.125 tol=12.6
2024-12-07 02:40:00,150 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=55.9 pTM=0.27 ipTM=0.129 tol=5.65
2024-12-07 02:40:04,079 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=55.2 pTM=0.268 ipTM=0.116 tol=2.55
2024-12-07 02:40:08,013 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=55.7 pTM=0.265 ipTM=0.106 tol=1.21
2024-12-07 02:40:11,948 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=55.8 pTM=0.263 ipTM=0.106 tol=1.88
2024-12-07 02:40:15,879 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=55.6 pTM=0.263 ipTM=0.106 tol=2.36
2024-12-07 02:40:19,810 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=55.6 pTM=0.276 ipTM=0.171 tol=1.47
2024-12-07 02:40:23,741 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=54.8 pTM=0.268 ipTM=0.116 tol=2.2
2024-12-07 02:40:23,742 alphafold2_multimer_v3_model_4_seed_000 took 121.8s (30 recycles)
2024-12-07 02:40:27,791 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=48.8 pTM=0.287 ipTM=0.17
2024-12-07 02:40:31,710 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=49 pTM=0.255 ipTM=0.102 tol=9.92
2024-12-07 02:40:35,628 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=53.7 pTM=0.352 ipTM=0.284 tol=16.2
2024-12-07 02:40:39,553 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=55.1 pTM=0.268 ipTM=0.0981 tol=6.13
2024-12-07 02:40:43,478 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=55.8 pTM=0.281 ipTM=0.0995 tol=3.74
2024-12-07 02:40:47,408 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=54.4 pTM=0.291 ipTM=0.149 tol=9.57
2024-12-07 02:40:51,333 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=55.7 pTM=0.281 ipTM=0.121 tol=8.45
2024-12-07 02:40:55,264 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=54.4 pTM=0.286 ipTM=0.148 tol=7.17
2024-12-07 02:40:59,189 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=56.7 pTM=0.281 ipTM=0.12 tol=8.98
2024-12-07 02:41:03,112 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=55.2 pTM=0.294 ipTM=0.143 tol=5.7
2024-12-07 02:41:07,033 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=55.2 pTM=0.277 ipTM=0.116 tol=3.23
2024-12-07 02:41:10,954 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=55.6 pTM=0.275 ipTM=0.107 tol=2.39
2024-12-07 02:41:14,872 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=55 pTM=0.307 ipTM=0.157 tol=4.22
2024-12-07 02:41:18,791 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=55.6 pTM=0.288 ipTM=0.125 tol=4.14
2024-12-07 02:41:22,713 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=54.8 pTM=0.28 ipTM=0.113 tol=3.89
2024-12-07 02:41:26,637 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=54.8 pTM=0.29 ipTM=0.135 tol=4.53
2024-12-07 02:41:30,560 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=55.9 pTM=0.281 ipTM=0.116 tol=3.89
2024-12-07 02:41:34,484 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=56 pTM=0.277 ipTM=0.115 tol=3.49
2024-12-07 02:41:38,408 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=56 pTM=0.321 ipTM=0.185 tol=4.27
2024-12-07 02:41:42,332 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=55.1 pTM=0.279 ipTM=0.112 tol=4.29
2024-12-07 02:41:46,259 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=55.2 pTM=0.277 ipTM=0.111 tol=2.55
2024-12-07 02:41:50,188 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=55 pTM=0.277 ipTM=0.116 tol=3.19
2024-12-07 02:41:54,109 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=56 pTM=0.293 ipTM=0.149 tol=4.68
2024-12-07 02:41:58,032 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.8 pTM=0.274 ipTM=0.105 tol=3.98
2024-12-07 02:42:01,954 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=55.3 pTM=0.308 ipTM=0.154 tol=5.28
2024-12-07 02:42:05,878 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=55.2 pTM=0.282 ipTM=0.122 tol=6.99
2024-12-07 02:42:09,796 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=55.6 pTM=0.283 ipTM=0.124 tol=6.12
2024-12-07 02:42:13,722 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=53.8 pTM=0.271 ipTM=0.104 tol=6.08
2024-12-07 02:42:17,640 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.4 pTM=0.276 ipTM=0.117 tol=7.48
2024-12-07 02:42:21,561 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=54.1 pTM=0.277 ipTM=0.106 tol=4.84
2024-12-07 02:42:25,478 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=54.7 pTM=0.311 ipTM=0.168 tol=6.42
2024-12-07 02:42:25,479 alphafold2_multimer_v3_model_5_seed_000 took 121.6s (30 recycles)
2024-12-07 02:42:25,598 reranking models by 'multimer' metric
2024-12-07 02:42:28,425 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 02:42:41,293 Relaxation took 15.7s
2024-12-07 02:42:41,293 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=54.7 pTM=0.311 ipTM=0.168
2024-12-07 02:42:59,591 Relaxation took 18.3s
2024-12-07 02:42:59,591 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=55.9 pTM=0.291 ipTM=0.139
2024-12-07 02:43:06,678 Relaxation took 7.1s
2024-12-07 02:43:06,678 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=54.8 pTM=0.268 ipTM=0.116
2024-12-07 02:43:14,360 Relaxation took 7.7s
2024-12-07 02:43:14,360 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=57.2 pTM=0.248 ipTM=0.103
2024-12-07 02:43:26,706 Relaxation took 12.3s
2024-12-07 02:43:26,706 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=55.6 pTM=0.262 ipTM=0.0908
2024-12-07 02:43:27,622 Done