2024-12-07 03:25:02,944 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-07 03:25:03,253 Running on GPU 2024-12-07 03:25:06,967 Found 6 citations for tools or databases 2024-12-07 03:25:06,967 Query 1/1: MIB1_COASY (length 1570) 2024-12-07 03:25:07,268 Sleeping for 8s. Reason: PENDING 2024-12-07 03:25:15,519 Sleeping for 9s. Reason: RUNNING 2024-12-07 03:25:24,776 Sleeping for 8s. Reason: RUNNING 2024-12-07 03:25:33,041 Sleeping for 7s. Reason: RUNNING 2024-12-07 03:25:40,310 Sleeping for 7s. Reason: RUNNING 2024-12-07 03:25:47,563 Sleeping for 6s. Reason: RUNNING 2024-12-07 03:25:53,815 Sleeping for 8s. Reason: RUNNING 2024-12-07 03:26:02,080 Sleeping for 10s. Reason: RUNNING 2024-12-07 03:26:12,347 Sleeping for 5s. Reason: RUNNING 2024-12-07 03:26:17,604 Sleeping for 9s. Reason: RUNNING 2024-12-07 03:26:26,863 Sleeping for 10s. Reason: RUNNING 2024-12-07 03:26:37,127 Sleeping for 7s. Reason: RUNNING 2024-12-07 03:26:44,386 Sleeping for 8s. Reason: RUNNING 2024-12-07 03:26:52,642 Sleeping for 7s. Reason: RUNNING 2024-12-07 03:26:59,899 Sleeping for 8s. Reason: RUNNING 2024-12-07 03:27:08,153 Sleeping for 5s. Reason: RUNNING 2024-12-07 03:27:13,408 Sleeping for 5s. Reason: RUNNING 2024-12-07 03:27:18,672 Sleeping for 10s. Reason: RUNNING 2024-12-07 03:27:28,936 Sleeping for 6s. Reason: RUNNING 2024-12-07 03:27:35,196 Sleeping for 10s. Reason: RUNNING 2024-12-07 03:27:45,461 Sleeping for 5s. Reason: RUNNING 2024-12-07 03:27:50,728 Sleeping for 10s. Reason: RUNNING 2024-12-07 03:28:00,994 Sleeping for 8s. Reason: RUNNING 2024-12-07 03:28:09,262 Sleeping for 8s. Reason: RUNNING 2024-12-07 03:28:19,463 Sleeping for 8s. Reason: PENDING 2024-12-07 03:28:27,721 Sleeping for 8s. Reason: RUNNING 2024-12-07 03:28:35,975 Sleeping for 7s. Reason: RUNNING 2024-12-07 03:28:43,238 Sleeping for 9s. Reason: RUNNING 2024-12-07 03:28:52,496 Sleeping for 7s. Reason: RUNNING 2024-12-07 03:28:59,759 Sleeping for 9s. Reason: RUNNING 2024-12-07 03:29:09,017 Sleeping for 9s. Reason: RUNNING 2024-12-07 03:29:18,287 Sleeping for 9s. Reason: RUNNING 2024-12-07 03:29:27,545 Sleeping for 7s. Reason: RUNNING 2024-12-07 03:29:34,812 Sleeping for 10s. Reason: RUNNING 2024-12-07 03:29:45,076 Sleeping for 7s. Reason: RUNNING 2024-12-07 03:29:52,336 Sleeping for 9s. Reason: RUNNING 2024-12-07 03:30:01,605 Sleeping for 7s. Reason: RUNNING 2024-12-07 03:30:08,858 Sleeping for 7s. Reason: RUNNING 2024-12-07 03:30:16,120 Sleeping for 7s. Reason: RUNNING 2024-12-07 03:30:23,379 Sleeping for 8s. Reason: RUNNING 2024-12-07 03:30:31,645 Sleeping for 10s. Reason: RUNNING 2024-12-07 03:30:48,270 Setting max_seq=508, max_extra_seq=2048 2024-12-07 03:34:36,309 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=73.3 pTM=0.43 ipTM=0.17 2024-12-07 03:35:50,450 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=72.1 pTM=0.432 ipTM=0.178 tol=7.69 2024-12-07 03:37:04,890 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=72.8 pTM=0.434 ipTM=0.189 tol=7.83 2024-12-07 03:38:19,438 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=72.6 pTM=0.432 ipTM=0.19 tol=2.67 2024-12-07 03:39:33,993 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=73 pTM=0.435 ipTM=0.197 tol=1.77 2024-12-07 03:40:48,566 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=73.1 pTM=0.435 ipTM=0.195 tol=1.88 2024-12-07 03:42:03,117 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=73.1 pTM=0.435 ipTM=0.199 tol=1.43 2024-12-07 03:43:17,658 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=73.1 pTM=0.434 ipTM=0.199 tol=1.67 2024-12-07 03:44:32,204 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=73.2 pTM=0.435 ipTM=0.196 tol=1.57 2024-12-07 03:45:46,697 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=73.4 pTM=0.436 ipTM=0.195 tol=1.27 2024-12-07 03:47:01,139 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=73.4 pTM=0.436 ipTM=0.198 tol=0.87 2024-12-07 03:48:15,596 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=73.4 pTM=0.436 ipTM=0.198 tol=0.757 2024-12-07 03:49:30,148 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=73.2 pTM=0.434 ipTM=0.196 tol=0.682 2024-12-07 03:50:44,680 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=73 pTM=0.433 ipTM=0.196 tol=0.794 2024-12-07 03:51:59,195 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=73.2 pTM=0.435 ipTM=0.197 tol=0.764 2024-12-07 03:53:13,727 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=73.1 pTM=0.435 ipTM=0.195 tol=0.93 2024-12-07 03:54:28,252 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=73.2 pTM=0.435 ipTM=0.195 tol=0.925 2024-12-07 03:55:42,742 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73.3 pTM=0.435 ipTM=0.194 tol=0.494 2024-12-07 03:55:42,743 alphafold2_multimer_v3_model_1_seed_000 took 1489.1s (17 recycles) 2024-12-07 03:56:58,862 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=74.4 pTM=0.434 ipTM=0.19 2024-12-07 03:58:13,488 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=75.3 pTM=0.436 ipTM=0.194 tol=7.21 2024-12-07 03:59:28,148 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=75.6 pTM=0.433 ipTM=0.195 tol=4.7 2024-12-07 04:00:42,805 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=75.9 pTM=0.432 ipTM=0.196 tol=2.62 2024-12-07 04:01:57,448 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=76.1 pTM=0.431 ipTM=0.196 tol=1.57 2024-12-07 04:03:12,072 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=76.5 pTM=0.431 ipTM=0.199 tol=1.56 2024-12-07 04:04:26,670 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=76.3 pTM=0.428 ipTM=0.196 tol=1.41 2024-12-07 04:05:41,308 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=76.4 pTM=0.429 ipTM=0.197 tol=0.872 2024-12-07 04:06:55,952 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=76.5 pTM=0.43 ipTM=0.197 tol=0.604 2024-12-07 04:08:10,536 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=76.7 pTM=0.43 ipTM=0.198 tol=0.53 2024-12-07 04:09:25,191 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=76.7 pTM=0.43 ipTM=0.195 tol=0.479 2024-12-07 04:09:25,192 alphafold2_multimer_v3_model_2_seed_000 took 821.0s (10 recycles) 2024-12-07 04:10:41,399 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=75.3 pTM=0.428 ipTM=0.181 2024-12-07 04:11:56,180 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=75 pTM=0.426 ipTM=0.177 tol=14.2 2024-12-07 04:13:10,975 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=75.7 pTM=0.428 ipTM=0.211 tol=14.7 2024-12-07 04:14:25,613 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=75.3 pTM=0.428 ipTM=0.185 tol=6.62 2024-12-07 04:15:40,109 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=75.2 pTM=0.428 ipTM=0.182 tol=1.53 2024-12-07 04:16:54,626 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=75.5 pTM=0.431 ipTM=0.202 tol=2.27 2024-12-07 04:18:09,273 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=75.3 pTM=0.427 ipTM=0.181 tol=1.87 2024-12-07 04:19:23,970 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=75.2 pTM=0.428 ipTM=0.182 tol=1.53 2024-12-07 04:20:38,690 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=75.4 pTM=0.428 ipTM=0.19 tol=2 2024-12-07 04:21:53,394 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=75 pTM=0.428 ipTM=0.177 tol=2.1 2024-12-07 04:23:08,104 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=74.9 pTM=0.43 ipTM=0.182 tol=2.66 2024-12-07 04:24:22,777 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=75.1 pTM=0.428 ipTM=0.182 tol=1.08 2024-12-07 04:25:37,481 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=74.9 pTM=0.43 ipTM=0.182 tol=3.7 2024-12-07 04:26:52,173 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=74.8 pTM=0.427 ipTM=0.181 tol=1.71 2024-12-07 04:28:06,857 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=75.2 pTM=0.427 ipTM=0.178 tol=2.38 2024-12-07 04:29:21,590 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=74.9 pTM=0.429 ipTM=0.18 tol=1.64 2024-12-07 04:30:36,272 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=75.1 pTM=0.429 ipTM=0.181 tol=2.89 2024-12-07 04:31:50,935 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=75.1 pTM=0.43 ipTM=0.185 tol=1.86 2024-12-07 04:33:05,610 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=75.1 pTM=0.429 ipTM=0.185 tol=1.54 2024-12-07 04:34:20,310 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=74.9 pTM=0.431 ipTM=0.19 tol=4.48 2024-12-07 04:35:34,970 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=75.2 pTM=0.432 ipTM=0.187 tol=1.49 2024-12-07 04:36:49,630 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=75.1 pTM=0.431 ipTM=0.19 tol=2.19 2024-12-07 04:38:04,329 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=75.2 pTM=0.43 ipTM=0.188 tol=2.7 2024-12-07 04:39:19,021 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=74.9 pTM=0.43 ipTM=0.183 tol=1.3 2024-12-07 04:40:33,697 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=74.8 pTM=0.43 ipTM=0.179 tol=4.27 2024-12-07 04:41:48,415 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=75.1 pTM=0.43 ipTM=0.186 tol=2.15 2024-12-07 04:43:03,123 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=75.4 pTM=0.429 ipTM=0.179 tol=2.62 2024-12-07 04:44:17,835 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=75 pTM=0.429 ipTM=0.182 tol=1.77 2024-12-07 04:45:32,518 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=75.1 pTM=0.429 ipTM=0.181 tol=2.55 2024-12-07 04:46:47,224 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=74.9 pTM=0.429 ipTM=0.185 tol=1.99 2024-12-07 04:48:01,964 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=74.9 pTM=0.429 ipTM=0.178 tol=2.21 2024-12-07 04:48:01,965 alphafold2_multimer_v3_model_3_seed_000 took 2315.3s (30 recycles) 2024-12-07 04:49:18,072 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=73.8 pTM=0.44 ipTM=0.219 2024-12-07 04:50:32,783 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=73.3 pTM=0.521 ipTM=0.646 tol=23.4 2024-12-07 04:51:47,494 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=73.9 pTM=0.432 ipTM=0.213 tol=8.97 2024-12-07 04:53:02,289 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=73.9 pTM=0.429 ipTM=0.187 tol=5.23 2024-12-07 04:54:16,990 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=73.4 pTM=0.428 ipTM=0.189 tol=4.38 2024-12-07 04:55:31,697 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=73.8 pTM=0.429 ipTM=0.187 tol=4.3 2024-12-07 04:56:46,439 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=73.5 pTM=0.427 ipTM=0.185 tol=6.63 2024-12-07 04:58:01,085 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=73.8 pTM=0.429 ipTM=0.19 tol=6.09 2024-12-07 04:59:15,783 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=73.7 pTM=0.429 ipTM=0.187 tol=5.75 2024-12-07 05:00:30,499 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=73.7 pTM=0.428 ipTM=0.188 tol=4.57 2024-12-07 05:01:45,124 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=73.5 pTM=0.427 ipTM=0.186 tol=5.89 2024-12-07 05:02:59,755 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=73.9 pTM=0.426 ipTM=0.187 tol=3.62 2024-12-07 05:04:14,429 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=74.1 pTM=0.427 ipTM=0.186 tol=4.19 2024-12-07 05:05:29,088 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=73.8 pTM=0.426 ipTM=0.187 tol=4.84 2024-12-07 05:06:43,807 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=74.2 pTM=0.427 ipTM=0.182 tol=4.5 2024-12-07 05:07:58,386 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=73.8 pTM=0.427 ipTM=0.187 tol=2.56 2024-12-07 05:09:13,028 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=74.3 pTM=0.428 ipTM=0.185 tol=3.14 2024-12-07 05:10:27,655 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=73.9 pTM=0.425 ipTM=0.188 tol=3.51 2024-12-07 05:11:42,166 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=74.2 pTM=0.428 ipTM=0.186 tol=3.39 2024-12-07 05:12:56,720 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=73.9 pTM=0.426 ipTM=0.191 tol=2.6 2024-12-07 05:14:11,298 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=74.2 pTM=0.428 ipTM=0.186 tol=3.55 2024-12-07 05:15:25,932 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=74 pTM=0.426 ipTM=0.191 tol=3.81 2024-12-07 05:16:40,596 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=74.4 pTM=0.427 ipTM=0.184 tol=3.88 2024-12-07 05:17:55,282 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=74.2 pTM=0.425 ipTM=0.19 tol=3.09 2024-12-07 05:19:09,968 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=74.3 pTM=0.427 ipTM=0.183 tol=2.62 2024-12-07 05:20:24,637 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=74.1 pTM=0.426 ipTM=0.188 tol=2.92 2024-12-07 05:21:39,312 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=74.5 pTM=0.428 ipTM=0.185 tol=2.94 2024-12-07 05:22:53,915 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=74.2 pTM=0.426 ipTM=0.188 tol=2.44 2024-12-07 05:24:08,445 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=74.4 pTM=0.427 ipTM=0.185 tol=2.4 2024-12-07 05:25:23,009 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=74.1 pTM=0.425 ipTM=0.188 tol=2.93 2024-12-07 05:26:37,657 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=74.3 pTM=0.427 ipTM=0.184 tol=2.43 2024-12-07 05:26:37,659 alphafold2_multimer_v3_model_4_seed_000 took 2314.2s (30 recycles) 2024-12-07 05:27:53,689 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=73.7 pTM=0.422 ipTM=0.174 2024-12-07 05:29:08,319 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=74.6 pTM=0.424 ipTM=0.174 tol=9.77 2024-12-07 05:30:22,902 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=75.4 pTM=0.428 ipTM=0.197 tol=6.86 2024-12-07 05:31:37,555 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=76.4 pTM=0.517 ipTM=0.612 tol=8.51 2024-12-07 05:32:52,167 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=76.9 pTM=0.536 ipTM=0.666 tol=4.53 2024-12-07 05:34:06,726 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=77.1 pTM=0.541 ipTM=0.69 tol=3.82 2024-12-07 05:35:21,234 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=76.9 pTM=0.541 ipTM=0.697 tol=1.58 2024-12-07 05:36:35,750 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=76.7 pTM=0.531 ipTM=0.691 tol=3.36 2024-12-07 05:37:50,237 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=76.8 pTM=0.531 ipTM=0.685 tol=4.6 2024-12-07 05:39:04,815 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=76.9 pTM=0.528 ipTM=0.686 tol=2.99 2024-12-07 05:40:19,436 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=76.8 pTM=0.525 ipTM=0.697 tol=4.34 2024-12-07 05:41:34,085 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=76.8 pTM=0.526 ipTM=0.702 tol=3.31 2024-12-07 05:42:48,595 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=76.9 pTM=0.537 ipTM=0.689 tol=5.11 2024-12-07 05:44:03,132 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=76.7 pTM=0.533 ipTM=0.683 tol=2.28 2024-12-07 05:45:17,763 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=76.8 pTM=0.527 ipTM=0.689 tol=1.83 2024-12-07 05:46:32,411 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=76.8 pTM=0.528 ipTM=0.703 tol=2.35 2024-12-07 05:47:46,933 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=76.8 pTM=0.528 ipTM=0.711 tol=1.21 2024-12-07 05:49:01,408 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=76.9 pTM=0.539 ipTM=0.702 tol=3.59 2024-12-07 05:50:15,986 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=76.8 pTM=0.537 ipTM=0.693 tol=1.05 2024-12-07 05:51:30,587 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=76.6 pTM=0.528 ipTM=0.7 tol=2.68 2024-12-07 05:52:45,254 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=76.8 pTM=0.527 ipTM=0.705 tol=3.46 2024-12-07 05:53:59,905 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=76.8 pTM=0.525 ipTM=0.701 tol=2.59 2024-12-07 05:55:14,520 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=76.6 pTM=0.528 ipTM=0.692 tol=4.2 2024-12-07 05:56:29,137 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=76.6 pTM=0.526 ipTM=0.696 tol=1.82 2024-12-07 05:57:43,693 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=76.5 pTM=0.527 ipTM=0.708 tol=4.43 2024-12-07 05:58:58,274 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=76.8 pTM=0.533 ipTM=0.692 tol=5.61 2024-12-07 06:00:12,883 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=76.7 pTM=0.538 ipTM=0.695 tol=1.83 2024-12-07 06:01:27,466 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=76.6 pTM=0.533 ipTM=0.696 tol=1.33 2024-12-07 06:02:42,058 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=76.6 pTM=0.531 ipTM=0.704 tol=7.79 2024-12-07 06:03:56,696 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=76.7 pTM=0.531 ipTM=0.702 tol=2.9 2024-12-07 06:05:11,243 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=76.7 pTM=0.541 ipTM=0.698 tol=7.71 2024-12-07 06:05:11,244 alphafold2_multimer_v3_model_5_seed_000 took 2312.1s (30 recycles) 2024-12-07 06:05:12,687 reranking models by 'multimer' metric 2024-12-07 06:05:16,190 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-07 06:07:36,491 Relaxation took 143.8s 2024-12-07 06:07:36,492 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=76.7 pTM=0.541 ipTM=0.698 2024-12-07 06:11:37,902 Relaxation took 241.4s 2024-12-07 06:11:37,902 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=73.3 pTM=0.435 ipTM=0.194 2024-12-07 06:16:34,939 Relaxation took 297.0s 2024-12-07 06:16:34,939 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=76.7 pTM=0.43 ipTM=0.195 2024-12-07 06:19:24,957 Relaxation took 170.0s 2024-12-07 06:19:24,957 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=74.3 pTM=0.427 ipTM=0.184 2024-12-07 06:23:31,549 Relaxation took 246.6s 2024-12-07 06:23:31,550 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=74.9 pTM=0.429 ipTM=0.178 2024-12-07 06:23:35,169 Done