2024-12-07 03:44:54,458 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 03:44:54,785 Running on GPU
2024-12-07 03:44:58,150 Found 6 citations for tools or databases
2024-12-07 03:44:58,150 Query 1/1: MIB2_KCNH2 (length 2114)
2024-12-07 03:44:58,460 Sleeping for 10s. Reason: PENDING
2024-12-07 03:45:08,724 Sleeping for 9s. Reason: RUNNING
2024-12-07 03:45:17,979 Sleeping for 9s. Reason: RUNNING
2024-12-07 03:45:27,248 Sleeping for 10s. Reason: RUNNING
2024-12-07 03:45:37,507 Sleeping for 6s. Reason: RUNNING
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2024-12-07 03:45:52,019 Sleeping for 6s. Reason: RUNNING
2024-12-07 03:45:58,274 Sleeping for 6s. Reason: RUNNING
2024-12-07 03:46:04,527 Sleeping for 8s. Reason: RUNNING
2024-12-07 03:46:12,785 Sleeping for 10s. Reason: RUNNING
2024-12-07 03:46:23,045 Sleeping for 10s. Reason: RUNNING
2024-12-07 03:46:33,301 Sleeping for 9s. Reason: RUNNING
2024-12-07 03:46:42,556 Sleeping for 7s. Reason: RUNNING
2024-12-07 03:46:49,811 Sleeping for 5s. Reason: RUNNING
2024-12-07 03:46:55,061 Sleeping for 6s. Reason: RUNNING
2024-12-07 03:47:01,314 Sleeping for 8s. Reason: RUNNING
2024-12-07 03:47:09,572 Sleeping for 10s. Reason: RUNNING
2024-12-07 03:47:19,832 Sleeping for 5s. Reason: RUNNING
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2024-12-07 03:47:30,350 Sleeping for 6s. Reason: RUNNING
2024-12-07 03:47:36,603 Sleeping for 8s. Reason: RUNNING
2024-12-07 03:47:44,857 Sleeping for 6s. Reason: RUNNING
2024-12-07 03:47:51,105 Sleeping for 9s. Reason: RUNNING
2024-12-07 03:48:00,365 Sleeping for 5s. Reason: RUNNING
2024-12-07 03:48:05,627 Sleeping for 7s. Reason: RUNNING
2024-12-07 03:48:12,882 Sleeping for 5s. Reason: RUNNING
2024-12-07 03:48:18,138 Sleeping for 7s. Reason: RUNNING
2024-12-07 03:48:25,394 Sleeping for 10s. Reason: RUNNING
2024-12-07 03:48:35,661 Sleeping for 9s. Reason: RUNNING
2024-12-07 03:48:44,924 Sleeping for 10s. Reason: RUNNING
2024-12-07 03:48:55,350 Sleeping for 6s. Reason: RUNNING
2024-12-07 03:49:01,610 Sleeping for 10s. Reason: RUNNING
2024-12-07 03:49:11,871 Sleeping for 10s. Reason: RUNNING
2024-12-07 03:49:22,128 Sleeping for 6s. Reason: RUNNING
2024-12-07 03:49:28,383 Sleeping for 7s. Reason: RUNNING
2024-12-07 03:49:35,634 Sleeping for 9s. Reason: RUNNING
2024-12-07 03:49:44,898 Sleeping for 9s. Reason: RUNNING
2024-12-07 03:49:55,998 Sleeping for 10s. Reason: PENDING
2024-12-07 03:50:06,260 Sleeping for 10s. Reason: RUNNING
2024-12-07 03:50:16,514 Sleeping for 10s. Reason: RUNNING
2024-12-07 03:50:26,777 Sleeping for 8s. Reason: RUNNING
2024-12-07 03:50:35,039 Sleeping for 7s. Reason: RUNNING
2024-12-07 03:50:42,292 Sleeping for 10s. Reason: RUNNING
2024-12-07 03:50:52,554 Sleeping for 8s. Reason: RUNNING
2024-12-07 03:51:00,807 Sleeping for 7s. Reason: RUNNING
2024-12-07 03:51:08,068 Sleeping for 5s. Reason: RUNNING
2024-12-07 03:51:13,320 Sleeping for 9s. Reason: RUNNING
2024-12-07 03:51:22,580 Sleeping for 5s. Reason: RUNNING
2024-12-07 03:51:27,834 Sleeping for 6s. Reason: RUNNING
2024-12-07 03:51:34,091 Sleeping for 5s. Reason: RUNNING
2024-12-07 03:51:39,349 Sleeping for 5s. Reason: RUNNING
2024-12-07 03:51:44,606 Sleeping for 8s. Reason: RUNNING
2024-12-07 03:51:52,874 Sleeping for 10s. Reason: RUNNING
2024-12-07 03:52:03,133 Sleeping for 8s. Reason: RUNNING
2024-12-07 03:52:11,397 Sleeping for 10s. Reason: RUNNING
2024-12-07 03:52:21,656 Sleeping for 9s. Reason: RUNNING
2024-12-07 03:52:30,910 Sleeping for 10s. Reason: RUNNING
2024-12-07 03:52:41,176 Sleeping for 9s. Reason: RUNNING
2024-12-07 03:52:50,434 Sleeping for 9s. Reason: RUNNING
2024-12-07 03:52:59,690 Sleeping for 8s. Reason: RUNNING
2024-12-07 03:53:07,946 Sleeping for 7s. Reason: RUNNING
2024-12-07 03:53:15,200 Sleeping for 8s. Reason: RUNNING
2024-12-07 03:53:31,643 Setting max_seq=508, max_extra_seq=2048
2024-12-07 03:59:16,668 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=59.2 pTM=0.32 ipTM=0.202
2024-12-07 04:02:19,142 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=57.6 pTM=0.316 ipTM=0.214 tol=13.1
2024-12-07 04:05:21,676 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=56.8 pTM=0.316 ipTM=0.21 tol=11
2024-12-07 04:08:24,069 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=57 pTM=0.314 ipTM=0.211 tol=11.3
2024-12-07 04:11:26,435 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=57.4 pTM=0.316 ipTM=0.211 tol=5.72
2024-12-07 04:14:28,946 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=57.8 pTM=0.316 ipTM=0.212 tol=5.57
2024-12-07 04:17:31,344 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=58 pTM=0.323 ipTM=0.212 tol=10.6
2024-12-07 04:20:33,681 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=58.2 pTM=0.329 ipTM=0.211 tol=8.98
2024-12-07 04:23:36,058 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=58.2 pTM=0.334 ipTM=0.21 tol=5.6
2024-12-07 04:26:38,433 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=58.4 pTM=0.339 ipTM=0.211 tol=3.41
2024-12-07 04:29:40,726 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=58.4 pTM=0.343 ipTM=0.213 tol=2.54
2024-12-07 04:32:42,967 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=58.4 pTM=0.344 ipTM=0.212 tol=2.69
2024-12-07 04:35:45,231 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=58.4 pTM=0.345 ipTM=0.213 tol=2.11
2024-12-07 04:38:47,591 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=58.4 pTM=0.344 ipTM=0.212 tol=2.71
2024-12-07 04:41:49,923 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=58.4 pTM=0.348 ipTM=0.214 tol=2.76
2024-12-07 04:44:52,190 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=58.6 pTM=0.35 ipTM=0.212 tol=2.31
2024-12-07 04:47:54,460 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=58.7 pTM=0.349 ipTM=0.213 tol=2.91
2024-12-07 04:50:56,774 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=58.6 pTM=0.349 ipTM=0.213 tol=2.38
2024-12-07 04:53:59,097 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=58.7 pTM=0.349 ipTM=0.214 tol=4.53
2024-12-07 04:57:01,461 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=58.5 pTM=0.346 ipTM=0.215 tol=3.69
2024-12-07 05:00:03,819 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=58.5 pTM=0.347 ipTM=0.216 tol=2.69
2024-12-07 05:03:06,194 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=58.5 pTM=0.346 ipTM=0.213 tol=1.97
2024-12-07 05:06:08,524 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=58.4 pTM=0.346 ipTM=0.216 tol=2.96
2024-12-07 05:09:10,883 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=58.6 pTM=0.346 ipTM=0.212 tol=4.01
2024-12-07 05:12:13,157 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=58.6 pTM=0.348 ipTM=0.216 tol=4.96
2024-12-07 05:15:15,476 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=58.5 pTM=0.346 ipTM=0.214 tol=2.98
2024-12-07 05:18:17,760 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=58.7 pTM=0.35 ipTM=0.216 tol=2.36
2024-12-07 05:21:20,017 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=58.7 pTM=0.347 ipTM=0.214 tol=1.63
2024-12-07 05:24:22,310 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=58.6 pTM=0.348 ipTM=0.214 tol=3.11
2024-12-07 05:27:24,614 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=58.6 pTM=0.345 ipTM=0.213 tol=2.92
2024-12-07 05:30:26,847 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=58.7 pTM=0.348 ipTM=0.215 tol=2.16
2024-12-07 05:30:26,849 alphafold2_multimer_v3_model_1_seed_000 took 5810.0s (30 recycles)
2024-12-07 05:33:31,857 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.4 pTM=0.323 ipTM=0.209
2024-12-07 05:36:34,293 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=60.5 pTM=0.335 ipTM=0.214 tol=12.4
2024-12-07 05:39:36,786 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=61 pTM=0.34 ipTM=0.208 tol=9.05
2024-12-07 05:42:39,291 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.4 pTM=0.341 ipTM=0.204 tol=10.6
2024-12-07 05:45:41,855 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=61.5 pTM=0.344 ipTM=0.198 tol=7.93
2024-12-07 05:48:44,442 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=61.8 pTM=0.349 ipTM=0.198 tol=7.43
2024-12-07 05:51:47,006 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=61.7 pTM=0.346 ipTM=0.198 tol=6.64
2024-12-07 05:54:49,595 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=61.8 pTM=0.349 ipTM=0.197 tol=6.31
2024-12-07 05:57:52,151 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=61.8 pTM=0.349 ipTM=0.199 tol=6.77
2024-12-07 06:00:54,740 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=61.9 pTM=0.351 ipTM=0.201 tol=5.06
2024-12-07 06:03:57,308 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=61.8 pTM=0.351 ipTM=0.198 tol=5.43
2024-12-07 06:06:59,828 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.7 pTM=0.35 ipTM=0.201 tol=3.73
2024-12-07 06:10:02,297 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.7 pTM=0.349 ipTM=0.202 tol=3.93
2024-12-07 06:13:04,755 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=61.8 pTM=0.35 ipTM=0.203 tol=3.86
2024-12-07 06:16:07,133 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=61.8 pTM=0.352 ipTM=0.202 tol=3.36
2024-12-07 06:19:09,528 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=61.9 pTM=0.353 ipTM=0.203 tol=2.85
2024-12-07 06:22:11,984 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62 pTM=0.352 ipTM=0.202 tol=2.88
2024-12-07 06:25:14,474 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=61.9 pTM=0.352 ipTM=0.202 tol=3.9
2024-12-07 06:28:17,009 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61.8 pTM=0.35 ipTM=0.202 tol=2.15
2024-12-07 06:31:19,530 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=61.8 pTM=0.349 ipTM=0.202 tol=3.46
2024-12-07 06:34:22,065 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=61.8 pTM=0.35 ipTM=0.202 tol=4.01
2024-12-07 06:37:24,552 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=61.8 pTM=0.349 ipTM=0.203 tol=4.3
2024-12-07 06:40:27,032 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=61.8 pTM=0.348 ipTM=0.203 tol=7.09
2024-12-07 06:43:29,508 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=61.9 pTM=0.349 ipTM=0.202 tol=6.07
2024-12-07 06:46:32,028 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=61.9 pTM=0.349 ipTM=0.203 tol=5.2
2024-12-07 06:49:34,562 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=61.7 pTM=0.349 ipTM=0.204 tol=4.24
2024-12-07 06:52:37,108 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=61.9 pTM=0.351 ipTM=0.203 tol=3.72
2024-12-07 06:55:39,655 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=61.9 pTM=0.351 ipTM=0.203 tol=4.51
2024-12-07 06:58:42,209 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=61.8 pTM=0.351 ipTM=0.202 tol=5.01
2024-12-07 07:01:44,745 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=61.9 pTM=0.35 ipTM=0.203 tol=5.24
2024-12-07 07:04:47,281 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=61.9 pTM=0.35 ipTM=0.203 tol=4.11
2024-12-07 07:04:47,283 alphafold2_multimer_v3_model_2_seed_000 took 5657.9s (30 recycles)
2024-12-07 07:07:52,768 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=58.4 pTM=0.325 ipTM=0.198
2024-12-07 07:10:55,556 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=58.6 pTM=0.33 ipTM=0.196 tol=12.7
2024-12-07 07:13:58,309 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=58.7 pTM=0.345 ipTM=0.2 tol=9.89
2024-12-07 07:17:01,025 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=59.1 pTM=0.351 ipTM=0.196 tol=7.11
2024-12-07 07:20:03,692 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.4 pTM=0.356 ipTM=0.197 tol=5.11
2024-12-07 07:23:06,312 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=59.6 pTM=0.359 ipTM=0.195 tol=4.18
2024-12-07 07:26:09,021 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.7 pTM=0.362 ipTM=0.195 tol=3.46
2024-12-07 07:29:11,686 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=59.8 pTM=0.362 ipTM=0.196 tol=3.13
2024-12-07 07:32:14,297 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=59.9 pTM=0.364 ipTM=0.194 tol=3.89
2024-12-07 07:35:16,897 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=60.1 pTM=0.364 ipTM=0.195 tol=4.59
2024-12-07 07:38:19,460 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=60.1 pTM=0.365 ipTM=0.194 tol=3.98
2024-12-07 07:41:21,984 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60.1 pTM=0.365 ipTM=0.195 tol=4.62
2024-12-07 07:44:24,633 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=60 pTM=0.364 ipTM=0.193 tol=4
2024-12-07 07:47:27,263 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.1 pTM=0.367 ipTM=0.194 tol=3.84
2024-12-07 07:50:29,918 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=60.1 pTM=0.367 ipTM=0.193 tol=3.15
2024-12-07 07:53:32,568 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60.2 pTM=0.368 ipTM=0.194 tol=3.04
2024-12-07 07:56:35,233 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60.2 pTM=0.366 ipTM=0.192 tol=5.86
2024-12-07 07:59:37,845 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=60.2 pTM=0.368 ipTM=0.195 tol=6.52
2024-12-07 08:02:40,505 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=59.8 pTM=0.367 ipTM=0.195 tol=6.52
2024-12-07 08:05:43,114 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=59.8 pTM=0.365 ipTM=0.196 tol=5.38
2024-12-07 08:08:45,682 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=59.9 pTM=0.366 ipTM=0.196 tol=5.06
2024-12-07 08:11:48,246 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60.1 pTM=0.366 ipTM=0.196 tol=3.38
2024-12-07 08:14:50,873 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60 pTM=0.365 ipTM=0.194 tol=3.6
2024-12-07 08:17:53,449 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.2 pTM=0.366 ipTM=0.195 tol=3.15
2024-12-07 08:20:56,044 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=60.2 pTM=0.365 ipTM=0.194 tol=2.79
2024-12-07 08:23:58,655 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=60.2 pTM=0.366 ipTM=0.195 tol=3.61
2024-12-07 08:27:01,310 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60.2 pTM=0.367 ipTM=0.194 tol=3.17
2024-12-07 08:30:03,942 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.3 pTM=0.368 ipTM=0.196 tol=3.14
2024-12-07 08:33:06,661 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.1 pTM=0.366 ipTM=0.194 tol=2.64
2024-12-07 08:36:09,351 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.2 pTM=0.367 ipTM=0.196 tol=2.54
2024-12-07 08:39:11,932 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.2 pTM=0.367 ipTM=0.195 tol=2.38
2024-12-07 08:39:11,934 alphafold2_multimer_v3_model_3_seed_000 took 5662.0s (30 recycles)
2024-12-07 08:42:17,538 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=55.5 pTM=0.316 ipTM=0.204
2024-12-07 08:45:20,553 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=56.7 pTM=0.319 ipTM=0.206 tol=14.6
2024-12-07 08:48:23,586 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=57 pTM=0.319 ipTM=0.199 tol=9.46
2024-12-07 08:51:26,678 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=57.5 pTM=0.319 ipTM=0.237 tol=8.48
2024-12-07 08:54:29,774 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57.9 pTM=0.32 ipTM=0.265 tol=5.66
2024-12-07 08:57:32,781 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=58 pTM=0.32 ipTM=0.269 tol=10.1
2024-12-07 09:00:35,705 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=58 pTM=0.32 ipTM=0.24 tol=7.54
2024-12-07 09:03:38,657 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=58.1 pTM=0.321 ipTM=0.23 tol=5.33
2024-12-07 09:06:41,520 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=58.2 pTM=0.324 ipTM=0.241 tol=4.51
2024-12-07 09:09:44,276 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=58.4 pTM=0.327 ipTM=0.26 tol=4.23
2024-12-07 09:12:47,066 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=58.5 pTM=0.328 ipTM=0.254 tol=4.24
2024-12-07 09:15:49,841 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=58.5 pTM=0.328 ipTM=0.259 tol=4.64
2024-12-07 09:18:52,623 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=58.6 pTM=0.331 ipTM=0.264 tol=4.5
2024-12-07 09:21:55,411 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=58.7 pTM=0.333 ipTM=0.275 tol=4.45
2024-12-07 09:24:58,128 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=58.7 pTM=0.334 ipTM=0.267 tol=4.61
2024-12-07 09:28:00,810 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=58.8 pTM=0.336 ipTM=0.279 tol=4.68
2024-12-07 09:31:03,596 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=58.9 pTM=0.335 ipTM=0.275 tol=5.61
2024-12-07 09:34:06,361 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=58.8 pTM=0.336 ipTM=0.264 tol=4.57
2024-12-07 09:37:09,081 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=58.7 pTM=0.335 ipTM=0.256 tol=2.94
2024-12-07 09:40:11,767 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=58.6 pTM=0.332 ipTM=0.256 tol=3.25
2024-12-07 09:43:14,441 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=58.6 pTM=0.334 ipTM=0.269 tol=2.83
2024-12-07 09:46:17,040 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=58.6 pTM=0.335 ipTM=0.268 tol=3.13
2024-12-07 09:49:19,661 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=58.5 pTM=0.334 ipTM=0.269 tol=8.27
2024-12-07 09:52:22,348 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=58.9 pTM=0.339 ipTM=0.299 tol=7.17
2024-12-07 09:55:25,102 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=59.1 pTM=0.34 ipTM=0.297 tol=7.1
2024-12-07 09:58:27,792 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=58.9 pTM=0.34 ipTM=0.304 tol=4.8
2024-12-07 10:01:30,462 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=58.9 pTM=0.34 ipTM=0.29 tol=3.54
2024-12-07 10:04:33,098 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=59 pTM=0.342 ipTM=0.281 tol=3.47
2024-12-07 10:07:35,757 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=58.7 pTM=0.338 ipTM=0.264 tol=3.95
2024-12-07 10:10:38,444 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=58.7 pTM=0.336 ipTM=0.254 tol=3.52
2024-12-07 10:13:41,164 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=58.9 pTM=0.337 ipTM=0.273 tol=3.89
2024-12-07 10:13:41,166 alphafold2_multimer_v3_model_4_seed_000 took 5666.6s (30 recycles)
2024-12-07 10:16:46,557 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=57.6 pTM=0.316 ipTM=0.194
2024-12-07 10:19:49,178 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=58.1 pTM=0.326 ipTM=0.198 tol=16.3
2024-12-07 10:22:51,697 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58.7 pTM=0.331 ipTM=0.197 tol=6.9
2024-12-07 10:25:54,075 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=59.1 pTM=0.333 ipTM=0.2 tol=6.04
2024-12-07 10:28:56,427 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=59.4 pTM=0.336 ipTM=0.203 tol=6.03
2024-12-07 10:31:58,863 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=59.5 pTM=0.339 ipTM=0.203 tol=5.1
2024-12-07 10:35:01,247 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=59.6 pTM=0.345 ipTM=0.203 tol=5.11
2024-12-07 10:38:03,711 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=59.8 pTM=0.35 ipTM=0.202 tol=7.19
2024-12-07 10:41:06,110 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=59.9 pTM=0.352 ipTM=0.202 tol=4.28
2024-12-07 10:44:08,492 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=59.9 pTM=0.353 ipTM=0.203 tol=4.28
2024-12-07 10:47:10,900 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=59.8 pTM=0.353 ipTM=0.202 tol=2.79
2024-12-07 10:50:13,348 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59.8 pTM=0.354 ipTM=0.201 tol=5.9
2024-12-07 10:53:15,751 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=59.8 pTM=0.352 ipTM=0.203 tol=3.5
2024-12-07 10:56:18,161 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=59.9 pTM=0.354 ipTM=0.203 tol=4.21
2024-12-07 10:59:20,479 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=60 pTM=0.358 ipTM=0.203 tol=5.31
2024-12-07 11:02:22,836 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=60.1 pTM=0.356 ipTM=0.202 tol=6.5
2024-12-07 11:05:25,192 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=60.1 pTM=0.355 ipTM=0.202 tol=3.74
2024-12-07 11:08:27,530 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=60.1 pTM=0.357 ipTM=0.203 tol=6.76
2024-12-07 11:11:29,937 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=60.1 pTM=0.356 ipTM=0.202 tol=7.37
2024-12-07 11:14:32,331 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=59.8 pTM=0.352 ipTM=0.201 tol=5.89
2024-12-07 11:17:34,723 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=60 pTM=0.357 ipTM=0.202 tol=7.56
2024-12-07 11:20:37,134 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=60.1 pTM=0.355 ipTM=0.201 tol=6.73
2024-12-07 11:23:39,537 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=59.9 pTM=0.355 ipTM=0.202 tol=6.98
2024-12-07 11:26:41,896 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=60.1 pTM=0.356 ipTM=0.201 tol=7.14
2024-12-07 11:29:44,299 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=60.1 pTM=0.357 ipTM=0.202 tol=4.31
2024-12-07 11:32:46,635 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=60 pTM=0.355 ipTM=0.203 tol=7.58
2024-12-07 11:35:49,043 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=60.1 pTM=0.355 ipTM=0.202 tol=6.27
2024-12-07 11:38:51,462 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=60.1 pTM=0.355 ipTM=0.201 tol=4.46
2024-12-07 11:41:53,879 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=59.9 pTM=0.354 ipTM=0.201 tol=4.95
2024-12-07 11:44:56,239 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=59.9 pTM=0.354 ipTM=0.203 tol=7
2024-12-07 11:47:58,555 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=60 pTM=0.353 ipTM=0.203 tol=6.49
2024-12-07 11:47:58,557 alphafold2_multimer_v3_model_5_seed_000 took 5654.8s (30 recycles)
2024-12-07 11:48:01,142 reranking models by 'multimer' metric
2024-12-07 11:48:03,179 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 11:53:22,669 Relaxation took 321.5s
2024-12-07 11:53:22,670 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=58.9 pTM=0.337 ipTM=0.273
2024-12-07 12:01:30,736 Relaxation took 488.1s
2024-12-07 12:01:30,736 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=58.7 pTM=0.348 ipTM=0.215
2024-12-07 12:10:07,331 Relaxation took 516.6s
2024-12-07 12:10:07,331 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=60 pTM=0.353 ipTM=0.203
2024-12-07 12:16:34,838 Relaxation took 387.5s
2024-12-07 12:16:34,839 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=61.9 pTM=0.35 ipTM=0.203
2024-12-07 12:22:15,817 Relaxation took 341.0s
2024-12-07 12:22:15,818 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.2 pTM=0.367 ipTM=0.195
2024-12-07 12:22:21,616 Done