2024-12-07 03:57:50,036 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 03:57:50,346 Running on GPU
2024-12-07 03:57:54,184 Found 6 citations for tools or databases
2024-12-07 03:57:54,184 Query 1/1: MIB2_MACC1 (length 1807)
2024-12-07 03:57:54,478 Sleeping for 5s. Reason: PENDING
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2024-12-07 03:58:52,539 Sleeping for 5s. Reason: RUNNING
2024-12-07 03:58:57,793 Sleeping for 5s. Reason: RUNNING
2024-12-07 03:59:03,049 Sleeping for 9s. Reason: RUNNING
2024-12-07 03:59:12,310 Sleeping for 5s. Reason: RUNNING
2024-12-07 03:59:17,564 Sleeping for 9s. Reason: RUNNING
2024-12-07 03:59:26,823 Sleeping for 7s. Reason: RUNNING
2024-12-07 03:59:34,085 Sleeping for 10s. Reason: RUNNING
2024-12-07 03:59:44,349 Sleeping for 6s. Reason: RUNNING
2024-12-07 03:59:50,601 Sleeping for 6s. Reason: RUNNING
2024-12-07 03:59:56,865 Sleeping for 9s. Reason: RUNNING
2024-12-07 04:00:06,125 Sleeping for 7s. Reason: RUNNING
2024-12-07 04:00:13,380 Sleeping for 9s. Reason: RUNNING
2024-12-07 04:00:22,644 Sleeping for 6s. Reason: RUNNING
2024-12-07 04:00:28,901 Sleeping for 5s. Reason: RUNNING
2024-12-07 04:00:34,156 Sleeping for 8s. Reason: RUNNING
2024-12-07 04:00:42,415 Sleeping for 8s. Reason: RUNNING
2024-12-07 04:00:50,672 Sleeping for 5s. Reason: RUNNING
2024-12-07 04:00:57,393 Sleeping for 5s. Reason: PENDING
2024-12-07 04:01:02,650 Sleeping for 8s. Reason: RUNNING
2024-12-07 04:01:10,913 Sleeping for 5s. Reason: RUNNING
2024-12-07 04:01:16,168 Sleeping for 8s. Reason: RUNNING
2024-12-07 04:01:24,432 Sleeping for 9s. Reason: RUNNING
2024-12-07 04:01:33,686 Sleeping for 10s. Reason: RUNNING
2024-12-07 04:01:43,943 Sleeping for 6s. Reason: RUNNING
2024-12-07 04:01:50,195 Sleeping for 6s. Reason: RUNNING
2024-12-07 04:01:56,455 Sleeping for 6s. Reason: RUNNING
2024-12-07 04:02:02,712 Sleeping for 7s. Reason: RUNNING
2024-12-07 04:02:09,967 Sleeping for 6s. Reason: RUNNING
2024-12-07 04:02:16,220 Sleeping for 7s. Reason: RUNNING
2024-12-07 04:02:23,473 Sleeping for 10s. Reason: RUNNING
2024-12-07 04:02:33,737 Sleeping for 5s. Reason: RUNNING
2024-12-07 04:02:39,000 Sleeping for 10s. Reason: RUNNING
2024-12-07 04:02:49,260 Sleeping for 6s. Reason: RUNNING
2024-12-07 04:02:55,518 Sleeping for 7s. Reason: RUNNING
2024-12-07 04:03:06,281 Setting max_seq=508, max_extra_seq=2048
2024-12-07 04:07:51,303 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.4 pTM=0.334 ipTM=0.245
2024-12-07 04:09:48,153 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=62.8 pTM=0.34 ipTM=0.205 tol=9.81
2024-12-07 04:11:45,105 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=63.5 pTM=0.337 ipTM=0.204 tol=5.49
2024-12-07 04:13:42,124 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.2 pTM=0.338 ipTM=0.208 tol=4.32
2024-12-07 04:15:39,126 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=62.6 pTM=0.336 ipTM=0.207 tol=6.32
2024-12-07 04:17:36,105 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=63 pTM=0.337 ipTM=0.205 tol=3.37
2024-12-07 04:19:33,015 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=63.3 pTM=0.337 ipTM=0.205 tol=2.88
2024-12-07 04:21:29,923 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=63.1 pTM=0.337 ipTM=0.2 tol=2.13
2024-12-07 04:23:26,858 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=62.8 pTM=0.337 ipTM=0.205 tol=2.73
2024-12-07 04:25:23,845 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=63.7 pTM=0.338 ipTM=0.201 tol=2.19
2024-12-07 04:27:20,846 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=63.3 pTM=0.338 ipTM=0.205 tol=3.18
2024-12-07 04:29:17,815 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63.3 pTM=0.336 ipTM=0.201 tol=2.54
2024-12-07 04:31:14,713 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=63 pTM=0.337 ipTM=0.204 tol=2.26
2024-12-07 04:33:11,619 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=63.1 pTM=0.336 ipTM=0.211 tol=2.07
2024-12-07 04:35:08,539 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=63.5 pTM=0.338 ipTM=0.2 tol=2.41
2024-12-07 04:37:05,457 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=63.2 pTM=0.337 ipTM=0.202 tol=2.2
2024-12-07 04:39:02,373 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=63.7 pTM=0.338 ipTM=0.208 tol=2.45
2024-12-07 04:40:59,326 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=63 pTM=0.337 ipTM=0.211 tol=2.27
2024-12-07 04:42:56,181 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=63.3 pTM=0.337 ipTM=0.207 tol=2.62
2024-12-07 04:44:53,122 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=63.4 pTM=0.336 ipTM=0.207 tol=2.22
2024-12-07 04:46:50,031 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=63.1 pTM=0.336 ipTM=0.202 tol=2.37
2024-12-07 04:48:46,985 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=63.6 pTM=0.338 ipTM=0.242 tol=2.24
2024-12-07 04:50:43,885 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=63.2 pTM=0.337 ipTM=0.204 tol=2.27
2024-12-07 04:52:40,766 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=63.1 pTM=0.336 ipTM=0.202 tol=2.41
2024-12-07 04:54:37,639 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=63.7 pTM=0.338 ipTM=0.205 tol=3.5
2024-12-07 04:56:34,590 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=63.5 pTM=0.338 ipTM=0.202 tol=2.31
2024-12-07 04:58:31,522 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=63.2 pTM=0.337 ipTM=0.204 tol=1.85
2024-12-07 05:00:28,473 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=63.7 pTM=0.338 ipTM=0.211 tol=1.89
2024-12-07 05:02:25,345 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=63.5 pTM=0.338 ipTM=0.202 tol=2.29
2024-12-07 05:04:22,266 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63.5 pTM=0.339 ipTM=0.208 tol=2.39
2024-12-07 05:06:19,199 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=63.4 pTM=0.337 ipTM=0.203 tol=2.4
2024-12-07 05:06:19,201 alphafold2_multimer_v3_model_1_seed_000 took 3787.6s (30 recycles)
2024-12-07 05:08:18,415 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65.7 pTM=0.352 ipTM=0.279
2024-12-07 05:10:15,635 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66.1 pTM=0.342 ipTM=0.218 tol=11.8
2024-12-07 05:12:12,776 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.9 pTM=0.347 ipTM=0.232 tol=9.12
2024-12-07 05:14:09,887 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67.4 pTM=0.344 ipTM=0.196 tol=5.98
2024-12-07 05:16:07,009 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.8 pTM=0.345 ipTM=0.2 tol=4.58
2024-12-07 05:18:04,171 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.8 pTM=0.345 ipTM=0.204 tol=3.48
2024-12-07 05:20:01,335 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67.9 pTM=0.346 ipTM=0.193 tol=1.92
2024-12-07 05:21:58,487 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.1 pTM=0.346 ipTM=0.21 tol=3.25
2024-12-07 05:23:55,616 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68 pTM=0.346 ipTM=0.198 tol=2.31
2024-12-07 05:25:52,774 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.1 pTM=0.346 ipTM=0.202 tol=2.13
2024-12-07 05:27:49,961 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.2 pTM=0.346 ipTM=0.207 tol=2.91
2024-12-07 05:29:47,174 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.1 pTM=0.347 ipTM=0.227 tol=4.22
2024-12-07 05:31:44,365 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68 pTM=0.347 ipTM=0.202 tol=2.88
2024-12-07 05:33:41,535 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68 pTM=0.347 ipTM=0.2 tol=4.86
2024-12-07 05:35:38,704 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=67.8 pTM=0.348 ipTM=0.201 tol=3.59
2024-12-07 05:37:35,928 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=67.8 pTM=0.348 ipTM=0.214 tol=2.58
2024-12-07 05:39:33,163 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=67.9 pTM=0.349 ipTM=0.206 tol=3.23
2024-12-07 05:41:30,370 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.9 pTM=0.349 ipTM=0.2 tol=3.81
2024-12-07 05:43:27,572 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67.9 pTM=0.349 ipTM=0.195 tol=3.62
2024-12-07 05:45:24,749 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68 pTM=0.348 ipTM=0.209 tol=4.38
2024-12-07 05:47:21,966 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68 pTM=0.347 ipTM=0.2 tol=3.28
2024-12-07 05:49:19,198 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68 pTM=0.348 ipTM=0.204 tol=3.99
2024-12-07 05:51:16,455 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.9 pTM=0.349 ipTM=0.24 tol=4.74
2024-12-07 05:53:13,590 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.1 pTM=0.346 ipTM=0.202 tol=4.52
2024-12-07 05:55:10,734 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68 pTM=0.347 ipTM=0.202 tol=2.43
2024-12-07 05:57:07,855 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=68 pTM=0.347 ipTM=0.202 tol=2.04
2024-12-07 05:59:04,968 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=67.9 pTM=0.347 ipTM=0.214 tol=2.61
2024-12-07 06:01:02,037 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67.9 pTM=0.348 ipTM=0.207 tol=1.67
2024-12-07 06:02:59,116 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=67.9 pTM=0.346 ipTM=0.202 tol=3.55
2024-12-07 06:04:56,231 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.1 pTM=0.348 ipTM=0.212 tol=2.93
2024-12-07 06:06:53,438 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=67.9 pTM=0.346 ipTM=0.21 tol=2.83
2024-12-07 06:06:53,440 alphafold2_multimer_v3_model_2_seed_000 took 3632.3s (30 recycles)
2024-12-07 06:08:52,609 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=66.6 pTM=0.371 ipTM=0.228
2024-12-07 06:10:49,891 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=65.2 pTM=0.334 ipTM=0.208 tol=20.7
2024-12-07 06:12:46,973 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=64.9 pTM=0.339 ipTM=0.226 tol=12.9
2024-12-07 06:14:44,085 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=64.6 pTM=0.336 ipTM=0.21 tol=8.06
2024-12-07 06:16:41,117 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=64.8 pTM=0.34 ipTM=0.201 tol=5.29
2024-12-07 06:18:38,147 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=65.1 pTM=0.337 ipTM=0.221 tol=4.99
2024-12-07 06:20:35,232 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.2 pTM=0.34 ipTM=0.207 tol=4.46
2024-12-07 06:22:32,383 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=64.9 pTM=0.337 ipTM=0.201 tol=6.35
2024-12-07 06:24:29,576 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=65.1 pTM=0.335 ipTM=0.203 tol=4.59
2024-12-07 06:26:26,676 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.1 pTM=0.336 ipTM=0.211 tol=3.45
2024-12-07 06:28:23,751 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63.9 pTM=0.335 ipTM=0.204 tol=9.05
2024-12-07 06:30:20,806 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.9 pTM=0.335 ipTM=0.21 tol=7.01
2024-12-07 06:32:17,900 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=64.8 pTM=0.335 ipTM=0.21 tol=5.22
2024-12-07 06:34:14,971 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=65 pTM=0.333 ipTM=0.209 tol=3.96
2024-12-07 06:36:12,070 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=65 pTM=0.334 ipTM=0.208 tol=4.69
2024-12-07 06:38:09,236 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=65.2 pTM=0.338 ipTM=0.224 tol=3.41
2024-12-07 06:40:06,355 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.5 pTM=0.34 ipTM=0.228 tol=2.92
2024-12-07 06:42:03,502 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.3 pTM=0.341 ipTM=0.237 tol=2.77
2024-12-07 06:44:00,611 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.4 pTM=0.342 ipTM=0.233 tol=3.88
2024-12-07 06:45:57,759 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.3 pTM=0.339 ipTM=0.238 tol=3.29
2024-12-07 06:47:54,952 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.2 pTM=0.344 ipTM=0.246 tol=3.43
2024-12-07 06:49:52,098 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=65.3 pTM=0.341 ipTM=0.245 tol=3.08
2024-12-07 06:51:49,252 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=65.2 pTM=0.339 ipTM=0.232 tol=3.88
2024-12-07 06:53:46,470 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=65.3 pTM=0.333 ipTM=0.225 tol=3.62
2024-12-07 06:55:43,613 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=64.6 pTM=0.344 ipTM=0.242 tol=5.79
2024-12-07 06:57:40,820 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65.4 pTM=0.334 ipTM=0.228 tol=4.69
2024-12-07 06:59:37,988 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.2 pTM=0.341 ipTM=0.24 tol=3.86
2024-12-07 07:01:35,135 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=65.4 pTM=0.338 ipTM=0.236 tol=2.24
2024-12-07 07:03:32,286 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=65 pTM=0.34 ipTM=0.229 tol=2.63
2024-12-07 07:05:29,441 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=65.3 pTM=0.34 ipTM=0.24 tol=2.21
2024-12-07 07:07:26,578 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=65.2 pTM=0.346 ipTM=0.245 tol=2.21
2024-12-07 07:07:26,580 alphafold2_multimer_v3_model_3_seed_000 took 3631.2s (30 recycles)
2024-12-07 07:09:25,927 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.4 pTM=0.336 ipTM=0.256
2024-12-07 07:11:23,404 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65 pTM=0.338 ipTM=0.198 tol=11.9
2024-12-07 07:13:20,798 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=64.8 pTM=0.339 ipTM=0.209 tol=14.2
2024-12-07 07:15:18,170 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.8 pTM=0.341 ipTM=0.19 tol=7.06
2024-12-07 07:17:15,546 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.7 pTM=0.339 ipTM=0.192 tol=5.67
2024-12-07 07:19:12,928 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.7 pTM=0.338 ipTM=0.194 tol=3.97
2024-12-07 07:21:10,352 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.8 pTM=0.337 ipTM=0.203 tol=9.6
2024-12-07 07:23:07,732 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.8 pTM=0.337 ipTM=0.21 tol=7.66
2024-12-07 07:25:05,146 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.8 pTM=0.338 ipTM=0.226 tol=7.3
2024-12-07 07:27:02,498 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.1 pTM=0.339 ipTM=0.231 tol=5.5
2024-12-07 07:28:59,802 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64.9 pTM=0.341 ipTM=0.228 tol=5.45
2024-12-07 07:30:57,142 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.9 pTM=0.341 ipTM=0.238 tol=7.22
2024-12-07 07:32:54,381 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.6 pTM=0.34 ipTM=0.25 tol=4.39
2024-12-07 07:34:51,613 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.6 pTM=0.35 ipTM=0.316 tol=5.2
2024-12-07 07:36:48,948 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.8 pTM=0.337 ipTM=0.234 tol=4.01
2024-12-07 07:38:46,229 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.8 pTM=0.356 ipTM=0.295 tol=3.71
2024-12-07 07:40:43,459 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65.3 pTM=0.37 ipTM=0.34 tol=3.31
2024-12-07 07:42:40,770 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64.9 pTM=0.348 ipTM=0.273 tol=3.73
2024-12-07 07:44:38,046 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=65 pTM=0.344 ipTM=0.265 tol=2.95
2024-12-07 07:46:35,365 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.7 pTM=0.341 ipTM=0.242 tol=2.45
2024-12-07 07:48:32,680 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.8 pTM=0.342 ipTM=0.237 tol=2.1
2024-12-07 07:50:30,009 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.8 pTM=0.343 ipTM=0.212 tol=2.63
2024-12-07 07:52:27,331 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64.7 pTM=0.344 ipTM=0.209 tol=2.85
2024-12-07 07:54:24,558 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.4 pTM=0.342 ipTM=0.271 tol=2.95
2024-12-07 07:56:21,838 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.6 pTM=0.341 ipTM=0.22 tol=3.38
2024-12-07 07:58:19,179 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.8 pTM=0.341 ipTM=0.204 tol=2.84
2024-12-07 08:00:16,399 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.7 pTM=0.342 ipTM=0.224 tol=3.2
2024-12-07 08:02:13,593 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.8 pTM=0.341 ipTM=0.215 tol=2.5
2024-12-07 08:04:10,737 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.6 pTM=0.343 ipTM=0.217 tol=2.57
2024-12-07 08:06:07,766 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=64.6 pTM=0.345 ipTM=0.287 tol=3.72
2024-12-07 08:08:04,948 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.6 pTM=0.341 ipTM=0.232 tol=3.89
2024-12-07 08:08:04,950 alphafold2_multimer_v3_model_4_seed_000 took 3636.5s (30 recycles)
2024-12-07 08:10:04,161 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.5 pTM=0.37 ipTM=0.237
2024-12-07 08:12:01,539 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.5 pTM=0.337 ipTM=0.212 tol=14.9
2024-12-07 08:13:58,884 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=66.7 pTM=0.376 ipTM=0.353 tol=11.1
2024-12-07 08:15:56,205 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=66.4 pTM=0.346 ipTM=0.259 tol=10.2
2024-12-07 08:17:53,450 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=66.6 pTM=0.336 ipTM=0.246 tol=6.46
2024-12-07 08:19:50,737 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=66.8 pTM=0.338 ipTM=0.242 tol=3.79
2024-12-07 08:21:47,958 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67 pTM=0.342 ipTM=0.247 tol=3.61
2024-12-07 08:23:45,127 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=67.1 pTM=0.347 ipTM=0.257 tol=5.54
2024-12-07 08:25:42,189 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67.1 pTM=0.357 ipTM=0.277 tol=5.51
2024-12-07 08:27:39,296 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.4 pTM=0.364 ipTM=0.289 tol=3.99
2024-12-07 08:29:36,395 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.8 pTM=0.374 ipTM=0.311 tol=3.4
2024-12-07 08:31:33,514 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.2 pTM=0.356 ipTM=0.261 tol=4.01
2024-12-07 08:33:30,636 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.2 pTM=0.356 ipTM=0.26 tol=2.41
2024-12-07 08:35:27,824 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.2 pTM=0.353 ipTM=0.259 tol=4
2024-12-07 08:37:25,002 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.6 pTM=0.372 ipTM=0.304 tol=2.59
2024-12-07 08:39:22,262 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.2 pTM=0.347 ipTM=0.241 tol=4.87
2024-12-07 08:41:19,524 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.1 pTM=0.347 ipTM=0.23 tol=4.49
2024-12-07 08:43:16,728 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67 pTM=0.346 ipTM=0.23 tol=4.88
2024-12-07 08:45:13,838 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.4 pTM=0.37 ipTM=0.297 tol=3.41
2024-12-07 08:47:10,976 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.2 pTM=0.349 ipTM=0.247 tol=3.03
2024-12-07 08:49:08,146 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=66.9 pTM=0.346 ipTM=0.226 tol=2.41
2024-12-07 08:51:05,283 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.1 pTM=0.349 ipTM=0.25 tol=3.47
2024-12-07 08:53:02,447 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.1 pTM=0.349 ipTM=0.23 tol=2.7
2024-12-07 08:54:59,639 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.1 pTM=0.348 ipTM=0.249 tol=1.77
2024-12-07 08:56:56,841 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.6 pTM=0.368 ipTM=0.286 tol=1.84
2024-12-07 08:58:54,065 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67 pTM=0.349 ipTM=0.249 tol=3
2024-12-07 09:00:51,321 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67.2 pTM=0.35 ipTM=0.249 tol=2.74
2024-12-07 09:02:48,544 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.4 pTM=0.356 ipTM=0.266 tol=1.91
2024-12-07 09:04:45,715 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.8 pTM=0.372 ipTM=0.299 tol=1.65
2024-12-07 09:06:42,914 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.4 pTM=0.365 ipTM=0.283 tol=2.02
2024-12-07 09:08:40,083 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.8 pTM=0.378 ipTM=0.315 tol=3.36
2024-12-07 09:08:40,084 alphafold2_multimer_v3_model_5_seed_000 took 3633.2s (30 recycles)
2024-12-07 09:08:41,988 reranking models by 'multimer' metric
2024-12-07 09:08:43,928 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 09:14:36,722 Relaxation took 354.7s
2024-12-07 09:14:36,722 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.8 pTM=0.378 ipTM=0.315
2024-12-07 09:19:41,409 Relaxation took 304.7s
2024-12-07 09:19:41,409 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=65.2 pTM=0.346 ipTM=0.245
2024-12-07 09:26:26,308 Relaxation took 404.9s
2024-12-07 09:26:26,308 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.6 pTM=0.341 ipTM=0.232
2024-12-07 09:33:58,127 Relaxation took 451.8s
2024-12-07 09:33:58,127 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=67.9 pTM=0.346 ipTM=0.21
2024-12-07 09:40:13,912 Relaxation took 375.8s
2024-12-07 09:40:13,912 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=63.4 pTM=0.337 ipTM=0.203
2024-12-07 09:40:18,405 Done