2024-12-07 05:04:47,094 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 05:04:47,453 Running on GPU
2024-12-07 05:04:51,297 Found 6 citations for tools or databases
2024-12-07 05:04:51,297 Query 1/1: MKRN1_GAPDHS (length 890)
2024-12-07 05:04:57,906 Setting max_seq=508, max_extra_seq=2048
2024-12-07 05:08:21,549 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61 pTM=0.437 ipTM=0.132
2024-12-07 05:08:42,303 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=61 pTM=0.438 ipTM=0.14 tol=8.74
2024-12-07 05:09:03,139 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=62.4 pTM=0.444 ipTM=0.146 tol=8.98
2024-12-07 05:09:23,995 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=62.6 pTM=0.447 ipTM=0.153 tol=7.56
2024-12-07 05:09:44,859 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=62.7 pTM=0.449 ipTM=0.186 tol=3.42
2024-12-07 05:10:05,755 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=62.7 pTM=0.45 ipTM=0.197 tol=3.54
2024-12-07 05:10:26,656 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=62.7 pTM=0.45 ipTM=0.215 tol=2.74
2024-12-07 05:10:47,569 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=62.7 pTM=0.451 ipTM=0.208 tol=2.04
2024-12-07 05:11:08,490 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=62.9 pTM=0.452 ipTM=0.212 tol=2.79
2024-12-07 05:11:29,449 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=62.9 pTM=0.452 ipTM=0.206 tol=3.61
2024-12-07 05:11:50,367 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=62.9 pTM=0.451 ipTM=0.205 tol=3.7
2024-12-07 05:12:11,291 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63.1 pTM=0.452 ipTM=0.197 tol=3.22
2024-12-07 05:12:32,211 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=63 pTM=0.453 ipTM=0.207 tol=1.54
2024-12-07 05:12:53,131 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=63.1 pTM=0.453 ipTM=0.221 tol=1.44
2024-12-07 05:13:14,054 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=63.3 pTM=0.454 ipTM=0.24 tol=1.3
2024-12-07 05:13:34,979 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=63.3 pTM=0.454 ipTM=0.252 tol=2.31
2024-12-07 05:13:55,918 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=63.2 pTM=0.454 ipTM=0.248 tol=1.71
2024-12-07 05:14:16,853 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=63.2 pTM=0.453 ipTM=0.237 tol=2.33
2024-12-07 05:14:37,796 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=63.4 pTM=0.455 ipTM=0.237 tol=2.36
2024-12-07 05:14:58,730 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=63 pTM=0.453 ipTM=0.219 tol=2.29
2024-12-07 05:15:19,655 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=63.2 pTM=0.454 ipTM=0.224 tol=2.61
2024-12-07 05:15:40,580 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=63.1 pTM=0.454 ipTM=0.238 tol=1.36
2024-12-07 05:16:01,520 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=63.4 pTM=0.453 ipTM=0.242 tol=1.32
2024-12-07 05:16:22,460 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=63.2 pTM=0.454 ipTM=0.246 tol=0.928
2024-12-07 05:16:43,401 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=63.3 pTM=0.455 ipTM=0.241 tol=0.932
2024-12-07 05:17:04,345 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=63.1 pTM=0.454 ipTM=0.23 tol=2.24
2024-12-07 05:17:25,282 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=63.1 pTM=0.454 ipTM=0.224 tol=1.74
2024-12-07 05:17:46,219 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=63.1 pTM=0.454 ipTM=0.229 tol=1.86
2024-12-07 05:18:07,164 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=63.4 pTM=0.454 ipTM=0.238 tol=2.64
2024-12-07 05:18:28,107 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63.1 pTM=0.454 ipTM=0.25 tol=2.05
2024-12-07 05:18:49,057 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=63.3 pTM=0.454 ipTM=0.229 tol=2.03
2024-12-07 05:18:49,058 alphafold2_multimer_v3_model_1_seed_000 took 824.6s (30 recycles)
2024-12-07 05:19:10,553 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.7 pTM=0.447 ipTM=0.15
2024-12-07 05:19:31,490 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62.3 pTM=0.442 ipTM=0.132 tol=7.93
2024-12-07 05:19:52,456 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=62.6 pTM=0.445 ipTM=0.133 tol=5.2
2024-12-07 05:20:13,423 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=63.3 pTM=0.443 ipTM=0.132 tol=2.96
2024-12-07 05:20:34,409 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63 pTM=0.443 ipTM=0.128 tol=2.18
2024-12-07 05:20:55,409 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=63.5 pTM=0.442 ipTM=0.13 tol=2.15
2024-12-07 05:21:16,417 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=63.5 pTM=0.442 ipTM=0.128 tol=2.89
2024-12-07 05:21:37,422 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=63.5 pTM=0.442 ipTM=0.127 tol=1.89
2024-12-07 05:21:58,432 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=64 pTM=0.456 ipTM=0.507 tol=7.1
2024-12-07 05:22:19,442 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64.1 pTM=0.454 ipTM=0.307 tol=4.34
2024-12-07 05:22:40,441 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=64 pTM=0.453 ipTM=0.316 tol=2.43
2024-12-07 05:23:01,453 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64.1 pTM=0.453 ipTM=0.309 tol=2.12
2024-12-07 05:23:22,453 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=63.8 pTM=0.453 ipTM=0.318 tol=2.38
2024-12-07 05:23:43,469 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=63.9 pTM=0.451 ipTM=0.28 tol=2.07
2024-12-07 05:24:04,479 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=63.8 pTM=0.45 ipTM=0.277 tol=1.98
2024-12-07 05:24:25,478 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=63.8 pTM=0.451 ipTM=0.282 tol=1.74
2024-12-07 05:24:46,477 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=63.7 pTM=0.451 ipTM=0.299 tol=2.23
2024-12-07 05:25:07,493 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=63.8 pTM=0.451 ipTM=0.289 tol=2.58
2024-12-07 05:25:28,486 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=63.6 pTM=0.452 ipTM=0.307 tol=2.3
2024-12-07 05:25:49,481 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=63.4 pTM=0.45 ipTM=0.274 tol=2.22
2024-12-07 05:26:10,465 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=63.3 pTM=0.45 ipTM=0.265 tol=1.97
2024-12-07 05:26:31,454 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=63.3 pTM=0.45 ipTM=0.296 tol=1.66
2024-12-07 05:26:52,447 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=63.6 pTM=0.45 ipTM=0.276 tol=1.39
2024-12-07 05:27:13,433 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=63.5 pTM=0.45 ipTM=0.27 tol=1.4
2024-12-07 05:27:34,426 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=63.4 pTM=0.449 ipTM=0.264 tol=1.6
2024-12-07 05:27:55,413 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=63.5 pTM=0.45 ipTM=0.263 tol=1.72
2024-12-07 05:28:16,395 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=63.5 pTM=0.449 ipTM=0.257 tol=1.36
2024-12-07 05:28:37,382 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=63.6 pTM=0.449 ipTM=0.266 tol=2.59
2024-12-07 05:28:58,366 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=63.6 pTM=0.45 ipTM=0.26 tol=1.45
2024-12-07 05:29:19,356 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=63.6 pTM=0.45 ipTM=0.27 tol=1.16
2024-12-07 05:29:40,349 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=63.7 pTM=0.451 ipTM=0.274 tol=1.08
2024-12-07 05:29:40,349 alphafold2_multimer_v3_model_2_seed_000 took 650.7s (30 recycles)
2024-12-07 05:30:01,995 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=60 pTM=0.43 ipTM=0.134
2024-12-07 05:30:23,076 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=61.8 pTM=0.434 ipTM=0.134 tol=16.3
2024-12-07 05:30:44,157 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=61.6 pTM=0.441 ipTM=0.19 tol=14.6
2024-12-07 05:31:05,230 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.1 pTM=0.443 ipTM=0.167 tol=19.7
2024-12-07 05:31:26,252 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=60.7 pTM=0.446 ipTM=0.161 tol=8.08
2024-12-07 05:31:47,267 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61.1 pTM=0.448 ipTM=0.279 tol=6.49
2024-12-07 05:32:08,278 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=60.8 pTM=0.447 ipTM=0.151 tol=8.27
2024-12-07 05:32:29,302 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=61 pTM=0.448 ipTM=0.163 tol=4.48
2024-12-07 05:32:50,321 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.1 pTM=0.446 ipTM=0.142 tol=4.61
2024-12-07 05:33:11,330 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61.2 pTM=0.444 ipTM=0.133 tol=3.66
2024-12-07 05:33:32,349 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61.1 pTM=0.444 ipTM=0.137 tol=2.91
2024-12-07 05:33:53,377 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61.3 pTM=0.443 ipTM=0.136 tol=2.65
2024-12-07 05:34:14,383 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.2 pTM=0.447 ipTM=0.156 tol=3.54
2024-12-07 05:34:35,405 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61.2 pTM=0.445 ipTM=0.139 tol=4.2
2024-12-07 05:34:56,438 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.5 pTM=0.446 ipTM=0.15 tol=3.06
2024-12-07 05:35:17,466 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.6 pTM=0.447 ipTM=0.184 tol=6.49
2024-12-07 05:35:38,510 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.5 pTM=0.448 ipTM=0.218 tol=2.92
2024-12-07 05:35:59,546 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.7 pTM=0.447 ipTM=0.217 tol=2.27
2024-12-07 05:36:20,599 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.8 pTM=0.447 ipTM=0.231 tol=2.07
2024-12-07 05:36:41,648 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.7 pTM=0.447 ipTM=0.221 tol=1.57
2024-12-07 05:37:02,699 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.7 pTM=0.447 ipTM=0.22 tol=1.54
2024-12-07 05:37:23,741 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.8 pTM=0.447 ipTM=0.242 tol=1.27
2024-12-07 05:37:44,782 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.8 pTM=0.447 ipTM=0.226 tol=1.33
2024-12-07 05:38:05,823 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.9 pTM=0.447 ipTM=0.226 tol=1.2
2024-12-07 05:38:26,862 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.8 pTM=0.447 ipTM=0.238 tol=1.58
2024-12-07 05:38:47,902 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.7 pTM=0.447 ipTM=0.24 tol=1.61
2024-12-07 05:39:08,954 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61.8 pTM=0.445 ipTM=0.228 tol=1.75
2024-12-07 05:39:29,999 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=61.8 pTM=0.447 ipTM=0.239 tol=2.68
2024-12-07 05:39:51,031 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.6 pTM=0.447 ipTM=0.234 tol=1.61
2024-12-07 05:40:12,061 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61.8 pTM=0.448 ipTM=0.234 tol=1.54
2024-12-07 05:40:33,104 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61.8 pTM=0.446 ipTM=0.221 tol=3.27
2024-12-07 05:40:33,105 alphafold2_multimer_v3_model_3_seed_000 took 652.1s (30 recycles)
2024-12-07 05:40:54,694 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=58.7 pTM=0.437 ipTM=0.15
2024-12-07 05:41:15,698 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=59.4 pTM=0.433 ipTM=0.134 tol=14.8
2024-12-07 05:41:36,694 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=59.8 pTM=0.439 ipTM=0.138 tol=9.88
2024-12-07 05:41:57,718 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=60.5 pTM=0.442 ipTM=0.129 tol=5.95
2024-12-07 05:42:18,731 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60.5 pTM=0.442 ipTM=0.143 tol=8.37
2024-12-07 05:42:39,751 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=60.8 pTM=0.443 ipTM=0.141 tol=9.73
2024-12-07 05:43:00,747 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=60.6 pTM=0.453 ipTM=0.408 tol=6.4
2024-12-07 05:43:21,734 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=60.3 pTM=0.453 ipTM=0.308 tol=3.91
2024-12-07 05:43:42,720 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=60.3 pTM=0.451 ipTM=0.211 tol=4
2024-12-07 05:44:03,701 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60.1 pTM=0.45 ipTM=0.196 tol=2.32
2024-12-07 05:44:24,671 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59.6 pTM=0.451 ipTM=0.186 tol=2.39
2024-12-07 05:44:45,651 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=59.4 pTM=0.45 ipTM=0.161 tol=2.86
2024-12-07 05:45:06,641 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=58.9 pTM=0.45 ipTM=0.161 tol=3.76
2024-12-07 05:45:27,629 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=58.8 pTM=0.452 ipTM=0.186 tol=3.58
2024-12-07 05:45:48,619 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=59.1 pTM=0.454 ipTM=0.288 tol=7.03
2024-12-07 05:46:09,605 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=58.8 pTM=0.454 ipTM=0.245 tol=4.66
2024-12-07 05:46:30,591 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=58.9 pTM=0.451 ipTM=0.167 tol=4.04
2024-12-07 05:46:51,564 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=58.8 pTM=0.452 ipTM=0.154 tol=2.91
2024-12-07 05:47:12,574 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=59.3 pTM=0.45 ipTM=0.181 tol=3.84
2024-12-07 05:47:33,568 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.3 pTM=0.452 ipTM=0.294 tol=4.41
2024-12-07 05:47:54,572 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59.4 pTM=0.452 ipTM=0.233 tol=3.39
2024-12-07 05:48:15,583 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=59.3 pTM=0.45 ipTM=0.24 tol=3.56
2024-12-07 05:48:36,597 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.4 pTM=0.452 ipTM=0.262 tol=3.15
2024-12-07 05:48:57,618 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=59.4 pTM=0.452 ipTM=0.254 tol=1.61
2024-12-07 05:49:18,638 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=59.5 pTM=0.452 ipTM=0.245 tol=1.83
2024-12-07 05:49:39,656 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=59.6 pTM=0.451 ipTM=0.24 tol=2.5
2024-12-07 05:50:00,670 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=59.5 pTM=0.451 ipTM=0.253 tol=2.16
2024-12-07 05:50:21,690 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=59.8 pTM=0.451 ipTM=0.251 tol=1.87
2024-12-07 05:50:42,692 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=59.4 pTM=0.451 ipTM=0.236 tol=2
2024-12-07 05:51:03,693 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=59.6 pTM=0.451 ipTM=0.244 tol=3.41
2024-12-07 05:51:24,704 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=59.5 pTM=0.449 ipTM=0.217 tol=3.93
2024-12-07 05:51:24,705 alphafold2_multimer_v3_model_4_seed_000 took 651.0s (30 recycles)
2024-12-07 05:51:46,303 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=59.2 pTM=0.436 ipTM=0.149
2024-12-07 05:52:07,334 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.3 pTM=0.435 ipTM=0.138 tol=11.5
2024-12-07 05:52:28,356 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61 pTM=0.445 ipTM=0.155 tol=8.91
2024-12-07 05:52:49,397 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.8 pTM=0.444 ipTM=0.144 tol=4.03
2024-12-07 05:53:10,435 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.7 pTM=0.444 ipTM=0.144 tol=2.83
2024-12-07 05:53:31,486 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=62 pTM=0.445 ipTM=0.141 tol=4.05
2024-12-07 05:53:52,535 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.9 pTM=0.445 ipTM=0.146 tol=2.25
2024-12-07 05:54:13,592 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61.8 pTM=0.447 ipTM=0.146 tol=3.3
2024-12-07 05:54:34,621 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=62 pTM=0.445 ipTM=0.142 tol=2.71
2024-12-07 05:54:55,663 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.1 pTM=0.445 ipTM=0.141 tol=3.04
2024-12-07 05:55:16,735 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62.1 pTM=0.446 ipTM=0.152 tol=2.5
2024-12-07 05:55:37,770 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=62.2 pTM=0.448 ipTM=0.154 tol=2.85
2024-12-07 05:55:58,797 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.2 pTM=0.448 ipTM=0.17 tol=1.62
2024-12-07 05:56:19,839 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.2 pTM=0.45 ipTM=0.162 tol=3.29
2024-12-07 05:56:40,884 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62.5 pTM=0.448 ipTM=0.168 tol=4.45
2024-12-07 05:57:01,920 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=62.3 pTM=0.448 ipTM=0.181 tol=4.29
2024-12-07 05:57:22,951 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62.3 pTM=0.448 ipTM=0.19 tol=2.85
2024-12-07 05:57:43,984 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62.3 pTM=0.448 ipTM=0.187 tol=2.37
2024-12-07 05:58:05,009 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62.4 pTM=0.45 ipTM=0.193 tol=3.05
2024-12-07 05:58:26,024 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62.4 pTM=0.448 ipTM=0.188 tol=3.33
2024-12-07 05:58:47,062 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=62.3 pTM=0.451 ipTM=0.19 tol=3.21
2024-12-07 05:59:08,084 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.5 pTM=0.451 ipTM=0.203 tol=1.88
2024-12-07 05:59:29,122 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=62.5 pTM=0.448 ipTM=0.188 tol=3.84
2024-12-07 05:59:50,161 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=62.6 pTM=0.448 ipTM=0.194 tol=3.32
2024-12-07 06:00:11,199 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.4 pTM=0.448 ipTM=0.182 tol=2.62
2024-12-07 06:00:32,251 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62.3 pTM=0.449 ipTM=0.19 tol=2.49
2024-12-07 06:00:53,289 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=62.3 pTM=0.448 ipTM=0.186 tol=2.92
2024-12-07 06:01:14,336 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.5 pTM=0.451 ipTM=0.2 tol=2.17
2024-12-07 06:01:35,372 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.2 pTM=0.448 ipTM=0.193 tol=1.82
2024-12-07 06:01:56,395 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62.3 pTM=0.45 ipTM=0.195 tol=2.35
2024-12-07 06:02:17,416 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62.4 pTM=0.449 ipTM=0.181 tol=1.65
2024-12-07 06:02:17,417 alphafold2_multimer_v3_model_5_seed_000 took 652.1s (30 recycles)
2024-12-07 06:02:18,046 reranking models by 'multimer' metric
2024-12-07 06:02:21,684 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 06:03:40,683 Relaxation took 82.6s
2024-12-07 06:03:40,683 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=63.7 pTM=0.451 ipTM=0.274
2024-12-07 06:04:42,583 Relaxation took 61.9s
2024-12-07 06:04:42,583 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=63.3 pTM=0.454 ipTM=0.229
2024-12-07 06:05:55,966 Relaxation took 73.4s
2024-12-07 06:05:55,966 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61.8 pTM=0.446 ipTM=0.221
2024-12-07 06:07:30,829 Relaxation took 94.9s
2024-12-07 06:07:30,829 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=59.5 pTM=0.449 ipTM=0.217
2024-12-07 06:08:50,107 Relaxation took 79.3s
2024-12-07 06:08:50,107 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62.4 pTM=0.449 ipTM=0.181
2024-12-07 06:08:51,880 Done