2024-12-07 05:25:03,980 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 05:25:04,273 Running on GPU
2024-12-07 05:25:07,820 Found 6 citations for tools or databases
2024-12-07 05:25:07,820 Query 1/1: MKRN1_LUC7L (length 853)
2024-12-07 05:25:08,122 Sleeping for 8s. Reason: PENDING
2024-12-07 05:25:16,378 Sleeping for 6s. Reason: RUNNING
2024-12-07 05:25:22,631 Sleeping for 8s. Reason: RUNNING
2024-12-07 05:25:30,886 Sleeping for 5s. Reason: RUNNING
2024-12-07 05:25:36,142 Sleeping for 8s. Reason: RUNNING
2024-12-07 05:25:44,398 Sleeping for 10s. Reason: RUNNING
2024-12-07 05:25:54,660 Sleeping for 5s. Reason: RUNNING
2024-12-07 05:25:59,911 Sleeping for 6s. Reason: RUNNING
2024-12-07 05:26:06,165 Sleeping for 9s. Reason: RUNNING
2024-12-07 05:26:15,423 Sleeping for 8s. Reason: RUNNING
2024-12-07 05:26:23,686 Sleeping for 8s. Reason: RUNNING
2024-12-07 05:26:31,948 Sleeping for 7s. Reason: RUNNING
2024-12-07 05:26:40,710 Sleeping for 9s. Reason: PENDING
2024-12-07 05:26:49,968 Sleeping for 10s. Reason: RUNNING
2024-12-07 05:27:00,226 Sleeping for 6s. Reason: RUNNING
2024-12-07 05:27:06,482 Sleeping for 10s. Reason: RUNNING
2024-12-07 05:27:16,748 Sleeping for 10s. Reason: RUNNING
2024-12-07 05:27:27,012 Sleeping for 6s. Reason: RUNNING
2024-12-07 05:27:36,233 Setting max_seq=508, max_extra_seq=2048
2024-12-07 05:30:37,793 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=52.2 pTM=0.331 ipTM=0.137
2024-12-07 05:30:52,752 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=52.6 pTM=0.335 ipTM=0.141 tol=13.3
2024-12-07 05:31:07,770 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=53.2 pTM=0.345 ipTM=0.152 tol=9.28
2024-12-07 05:31:22,846 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=53.6 pTM=0.337 ipTM=0.138 tol=5.3
2024-12-07 05:31:37,925 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=53.5 pTM=0.333 ipTM=0.146 tol=3.61
2024-12-07 05:31:53,040 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=54 pTM=0.328 ipTM=0.133 tol=1.72
2024-12-07 05:32:08,181 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=53.9 pTM=0.329 ipTM=0.149 tol=3.09
2024-12-07 05:32:23,333 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=54 pTM=0.332 ipTM=0.133 tol=8.88
2024-12-07 05:32:38,497 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=54 pTM=0.335 ipTM=0.174 tol=10.2
2024-12-07 05:32:53,643 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=54.2 pTM=0.334 ipTM=0.199 tol=6.41
2024-12-07 05:33:08,793 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=54.4 pTM=0.338 ipTM=0.237 tol=4.32
2024-12-07 05:33:23,960 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=54.3 pTM=0.334 ipTM=0.236 tol=3.41
2024-12-07 05:33:39,116 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=54.2 pTM=0.336 ipTM=0.232 tol=3.05
2024-12-07 05:33:54,282 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=54.2 pTM=0.337 ipTM=0.247 tol=3.65
2024-12-07 05:34:09,441 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=54.6 pTM=0.338 ipTM=0.241 tol=3.47
2024-12-07 05:34:24,597 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=55 pTM=0.339 ipTM=0.214 tol=4.66
2024-12-07 05:34:39,757 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=54.7 pTM=0.339 ipTM=0.207 tol=3.71
2024-12-07 05:34:54,920 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=54.8 pTM=0.337 ipTM=0.231 tol=3.98
2024-12-07 05:35:10,079 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=54.7 pTM=0.339 ipTM=0.237 tol=2.92
2024-12-07 05:35:25,269 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=54.5 pTM=0.333 ipTM=0.228 tol=2.9
2024-12-07 05:35:40,461 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=54.7 pTM=0.335 ipTM=0.234 tol=2.03
2024-12-07 05:35:55,657 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=54.4 pTM=0.333 ipTM=0.227 tol=4.38
2024-12-07 05:36:10,853 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=54.9 pTM=0.339 ipTM=0.234 tol=5.73
2024-12-07 05:36:26,061 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=54.2 pTM=0.332 ipTM=0.216 tol=3.48
2024-12-07 05:36:41,241 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=54.7 pTM=0.338 ipTM=0.21 tol=4.14
2024-12-07 05:36:56,446 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=54.5 pTM=0.333 ipTM=0.189 tol=2.7
2024-12-07 05:37:11,628 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=54.5 pTM=0.339 ipTM=0.242 tol=2.75
2024-12-07 05:37:26,802 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=54.5 pTM=0.336 ipTM=0.231 tol=1.95
2024-12-07 05:37:41,988 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=54.7 pTM=0.341 ipTM=0.246 tol=2.26
2024-12-07 05:37:57,175 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=54.2 pTM=0.334 ipTM=0.234 tol=4.1
2024-12-07 05:38:12,360 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=55 pTM=0.343 ipTM=0.242 tol=4.23
2024-12-07 05:38:12,361 alphafold2_multimer_v3_model_1_seed_000 took 631.0s (30 recycles)
2024-12-07 05:38:28,014 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=51.6 pTM=0.311 ipTM=0.134
2024-12-07 05:38:43,242 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=52.1 pTM=0.289 ipTM=0.122 tol=11.1
2024-12-07 05:38:58,495 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=52.7 pTM=0.292 ipTM=0.12 tol=7.37
2024-12-07 05:39:13,742 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=53 pTM=0.29 ipTM=0.119 tol=6.04
2024-12-07 05:39:29,019 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=53 pTM=0.288 ipTM=0.119 tol=7.18
2024-12-07 05:39:44,302 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=53.7 pTM=0.29 ipTM=0.119 tol=4.43
2024-12-07 05:39:59,586 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=53.7 pTM=0.303 ipTM=0.124 tol=7.66
2024-12-07 05:40:14,866 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=53.6 pTM=0.3 ipTM=0.125 tol=5.41
2024-12-07 05:40:30,126 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=53.2 pTM=0.294 ipTM=0.123 tol=6.58
2024-12-07 05:40:45,410 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=53.6 pTM=0.299 ipTM=0.121 tol=4.16
2024-12-07 05:41:00,693 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=53.8 pTM=0.302 ipTM=0.121 tol=5.16
2024-12-07 05:41:15,972 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=53.8 pTM=0.302 ipTM=0.123 tol=7.2
2024-12-07 05:41:31,259 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=53.4 pTM=0.299 ipTM=0.121 tol=2.97
2024-12-07 05:41:46,517 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=53.3 pTM=0.305 ipTM=0.142 tol=5.81
2024-12-07 05:42:01,802 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=53.1 pTM=0.306 ipTM=0.176 tol=9.38
2024-12-07 05:42:17,078 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=53.7 pTM=0.315 ipTM=0.178 tol=9.13
2024-12-07 05:42:32,356 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=53.4 pTM=0.322 ipTM=0.193 tol=7.29
2024-12-07 05:42:47,630 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=53.9 pTM=0.325 ipTM=0.197 tol=5.09
2024-12-07 05:43:02,881 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=53.7 pTM=0.325 ipTM=0.204 tol=3.51
2024-12-07 05:43:18,154 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=53.8 pTM=0.327 ipTM=0.214 tol=3.82
2024-12-07 05:43:33,424 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54.4 pTM=0.327 ipTM=0.207 tol=4.57
2024-12-07 05:43:48,694 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54.2 pTM=0.328 ipTM=0.216 tol=9.06
2024-12-07 05:44:03,963 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.4 pTM=0.333 ipTM=0.238 tol=9.17
2024-12-07 05:44:19,231 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=54.1 pTM=0.328 ipTM=0.222 tol=3.05
2024-12-07 05:44:34,501 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=54.4 pTM=0.334 ipTM=0.226 tol=2.91
2024-12-07 05:44:49,790 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54.1 pTM=0.328 ipTM=0.219 tol=4.08
2024-12-07 05:45:05,063 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.6 pTM=0.338 ipTM=0.272 tol=2.47
2024-12-07 05:45:20,332 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=54.4 pTM=0.335 ipTM=0.26 tol=2.58
2024-12-07 05:45:35,619 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=54.3 pTM=0.333 ipTM=0.266 tol=2.85
2024-12-07 05:45:50,878 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=54.5 pTM=0.332 ipTM=0.262 tol=2.16
2024-12-07 05:46:06,158 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=54.6 pTM=0.334 ipTM=0.264 tol=2.62
2024-12-07 05:46:06,158 alphafold2_multimer_v3_model_2_seed_000 took 473.3s (30 recycles)
2024-12-07 05:46:21,963 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=52.8 pTM=0.322 ipTM=0.121
2024-12-07 05:46:37,297 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=51.7 pTM=0.313 ipTM=0.117 tol=17.5
2024-12-07 05:46:52,629 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=51.2 pTM=0.324 ipTM=0.13 tol=17.1
2024-12-07 05:47:07,942 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=52.3 pTM=0.339 ipTM=0.151 tol=11.6
2024-12-07 05:47:23,251 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=52.5 pTM=0.336 ipTM=0.143 tol=8.72
2024-12-07 05:47:38,552 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=53.1 pTM=0.342 ipTM=0.146 tol=7.28
2024-12-07 05:47:53,852 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=53 pTM=0.339 ipTM=0.134 tol=5.38
2024-12-07 05:48:09,170 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=53 pTM=0.341 ipTM=0.142 tol=3.88
2024-12-07 05:48:24,492 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=53 pTM=0.34 ipTM=0.145 tol=4.48
2024-12-07 05:48:39,832 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=53 pTM=0.341 ipTM=0.152 tol=4.46
2024-12-07 05:48:55,159 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=53 pTM=0.339 ipTM=0.139 tol=9.46
2024-12-07 05:49:10,473 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=52.8 pTM=0.342 ipTM=0.15 tol=9.02
2024-12-07 05:49:25,806 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=52.6 pTM=0.339 ipTM=0.141 tol=5.88
2024-12-07 05:49:41,131 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=52.7 pTM=0.339 ipTM=0.137 tol=3.77
2024-12-07 05:49:56,449 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=52.7 pTM=0.347 ipTM=0.15 tol=4.74
2024-12-07 05:50:11,779 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=52.8 pTM=0.336 ipTM=0.133 tol=4.81
2024-12-07 05:50:27,099 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=52.6 pTM=0.345 ipTM=0.152 tol=5.18
2024-12-07 05:50:42,438 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=52.8 pTM=0.334 ipTM=0.128 tol=5.98
2024-12-07 05:50:57,745 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=52.7 pTM=0.347 ipTM=0.152 tol=5.63
2024-12-07 05:51:13,075 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=52.9 pTM=0.338 ipTM=0.129 tol=3.54
2024-12-07 05:51:28,395 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=52.7 pTM=0.344 ipTM=0.144 tol=8.88
2024-12-07 05:51:43,732 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=52.7 pTM=0.334 ipTM=0.128 tol=5.24
2024-12-07 05:51:59,057 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=52.7 pTM=0.345 ipTM=0.15 tol=6.11
2024-12-07 05:52:14,402 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=52.4 pTM=0.331 ipTM=0.129 tol=5.5
2024-12-07 05:52:29,734 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=52.2 pTM=0.33 ipTM=0.125 tol=9.88
2024-12-07 05:52:45,071 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=52.8 pTM=0.338 ipTM=0.136 tol=8.4
2024-12-07 05:53:00,401 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=52.7 pTM=0.346 ipTM=0.155 tol=7.72
2024-12-07 05:53:15,739 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=52.6 pTM=0.332 ipTM=0.128 tol=6.18
2024-12-07 05:53:31,045 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=52.6 pTM=0.336 ipTM=0.135 tol=7.46
2024-12-07 05:53:46,351 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=52.6 pTM=0.335 ipTM=0.135 tol=10.1
2024-12-07 05:54:01,654 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=52.8 pTM=0.346 ipTM=0.156 tol=6.35
2024-12-07 05:54:01,655 alphafold2_multimer_v3_model_3_seed_000 took 475.0s (30 recycles)
2024-12-07 05:54:17,348 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=50.4 pTM=0.344 ipTM=0.162
2024-12-07 05:54:32,619 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=51 pTM=0.344 ipTM=0.162 tol=18.6
2024-12-07 05:54:47,905 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=50.7 pTM=0.344 ipTM=0.147 tol=11
2024-12-07 05:55:03,177 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=51.1 pTM=0.348 ipTM=0.23 tol=7.74
2024-12-07 05:55:18,452 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=51.2 pTM=0.336 ipTM=0.131 tol=7.63
2024-12-07 05:55:33,754 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=51.7 pTM=0.336 ipTM=0.178 tol=8.99
2024-12-07 05:55:49,057 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=51.7 pTM=0.337 ipTM=0.138 tol=10.8
2024-12-07 05:56:04,362 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=51.6 pTM=0.342 ipTM=0.168 tol=6.16
2024-12-07 05:56:19,672 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=51.8 pTM=0.335 ipTM=0.154 tol=6.93
2024-12-07 05:56:34,982 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=51.4 pTM=0.336 ipTM=0.158 tol=10.9
2024-12-07 05:56:50,290 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=51.8 pTM=0.336 ipTM=0.152 tol=6.59
2024-12-07 05:57:05,599 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=51.8 pTM=0.337 ipTM=0.159 tol=5.7
2024-12-07 05:57:20,902 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=51.4 pTM=0.335 ipTM=0.148 tol=5.3
2024-12-07 05:57:36,199 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=51.7 pTM=0.339 ipTM=0.163 tol=6.88
2024-12-07 05:57:51,491 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=51.4 pTM=0.337 ipTM=0.156 tol=10.6
2024-12-07 05:58:06,805 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=51.9 pTM=0.336 ipTM=0.172 tol=6.59
2024-12-07 05:58:22,131 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=51.7 pTM=0.337 ipTM=0.147 tol=5.21
2024-12-07 05:58:37,456 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=51.7 pTM=0.333 ipTM=0.148 tol=8.07
2024-12-07 05:58:52,778 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=51.6 pTM=0.338 ipTM=0.157 tol=9.39
2024-12-07 05:59:08,084 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=51.7 pTM=0.339 ipTM=0.178 tol=7.17
2024-12-07 05:59:23,422 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=51.6 pTM=0.335 ipTM=0.146 tol=6.88
2024-12-07 05:59:38,748 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=51.8 pTM=0.338 ipTM=0.164 tol=7.35
2024-12-07 05:59:54,092 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=51.4 pTM=0.335 ipTM=0.154 tol=10
2024-12-07 06:00:09,411 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=51.9 pTM=0.338 ipTM=0.155 tol=10.1
2024-12-07 06:00:24,740 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=51.8 pTM=0.334 ipTM=0.146 tol=4.94
2024-12-07 06:00:40,067 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=51.7 pTM=0.337 ipTM=0.162 tol=7.93
2024-12-07 06:00:55,378 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=51.6 pTM=0.337 ipTM=0.174 tol=7.66
2024-12-07 06:01:10,706 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=51.8 pTM=0.336 ipTM=0.154 tol=5.99
2024-12-07 06:01:26,025 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=51.7 pTM=0.338 ipTM=0.167 tol=5.15
2024-12-07 06:01:41,339 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=51.6 pTM=0.338 ipTM=0.161 tol=3.5
2024-12-07 06:01:56,647 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=51.7 pTM=0.337 ipTM=0.168 tol=5.95
2024-12-07 06:01:56,647 alphafold2_multimer_v3_model_4_seed_000 took 474.5s (30 recycles)
2024-12-07 06:02:12,399 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=51.9 pTM=0.344 ipTM=0.156
2024-12-07 06:02:27,682 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=51.8 pTM=0.346 ipTM=0.151 tol=15.4
2024-12-07 06:02:42,976 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=52.4 pTM=0.342 ipTM=0.127 tol=9.68
2024-12-07 06:02:58,308 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=52.8 pTM=0.336 ipTM=0.122 tol=7.28
2024-12-07 06:03:13,631 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=52.8 pTM=0.335 ipTM=0.122 tol=6.93
2024-12-07 06:03:28,954 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=53.4 pTM=0.332 ipTM=0.12 tol=8.84
2024-12-07 06:03:44,289 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=53.2 pTM=0.329 ipTM=0.12 tol=6.54
2024-12-07 06:03:59,589 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=53.6 pTM=0.337 ipTM=0.127 tol=4.24
2024-12-07 06:04:14,892 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53.5 pTM=0.333 ipTM=0.124 tol=4.92
2024-12-07 06:04:30,213 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=53.8 pTM=0.334 ipTM=0.123 tol=5.07
2024-12-07 06:04:45,527 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53.4 pTM=0.335 ipTM=0.123 tol=9.89
2024-12-07 06:05:00,843 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53.5 pTM=0.333 ipTM=0.123 tol=8.8
2024-12-07 06:05:16,145 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=53.4 pTM=0.332 ipTM=0.121 tol=7.41
2024-12-07 06:05:31,449 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=53.3 pTM=0.333 ipTM=0.12 tol=5.22
2024-12-07 06:05:46,775 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.3 pTM=0.333 ipTM=0.122 tol=4.17
2024-12-07 06:06:02,122 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53.5 pTM=0.332 ipTM=0.123 tol=4.14
2024-12-07 06:06:17,466 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53.4 pTM=0.334 ipTM=0.123 tol=8.26
2024-12-07 06:06:32,813 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=53.4 pTM=0.334 ipTM=0.124 tol=7.31
2024-12-07 06:06:48,169 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53.5 pTM=0.339 ipTM=0.126 tol=6.11
2024-12-07 06:07:03,523 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.7 pTM=0.332 ipTM=0.121 tol=8.91
2024-12-07 06:07:18,860 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.5 pTM=0.337 ipTM=0.127 tol=7.43
2024-12-07 06:07:34,213 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=53.3 pTM=0.334 ipTM=0.128 tol=9.85
2024-12-07 06:07:49,550 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=53.6 pTM=0.335 ipTM=0.126 tol=6.07
2024-12-07 06:08:04,893 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.5 pTM=0.333 ipTM=0.121 tol=4.5
2024-12-07 06:08:20,229 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53.4 pTM=0.338 ipTM=0.124 tol=4.34
2024-12-07 06:08:35,556 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53.4 pTM=0.333 ipTM=0.12 tol=4.14
2024-12-07 06:08:50,875 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.5 pTM=0.333 ipTM=0.123 tol=4.6
2024-12-07 06:09:06,186 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=53.5 pTM=0.332 ipTM=0.125 tol=6.36
2024-12-07 06:09:21,500 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.7 pTM=0.334 ipTM=0.124 tol=6.76
2024-12-07 06:09:36,813 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=53.7 pTM=0.332 ipTM=0.123 tol=4.88
2024-12-07 06:09:52,129 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=53.7 pTM=0.333 ipTM=0.124 tol=6.22
2024-12-07 06:09:52,130 alphafold2_multimer_v3_model_5_seed_000 took 475.0s (30 recycles)
2024-12-07 06:09:52,590 reranking models by 'multimer' metric
2024-12-07 06:09:53,652 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 06:10:57,912 Relaxation took 65.3s
2024-12-07 06:10:57,912 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=54.6 pTM=0.334 ipTM=0.264
2024-12-07 06:11:53,257 Relaxation took 55.3s
2024-12-07 06:11:53,257 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=55 pTM=0.343 ipTM=0.242
2024-12-07 06:13:04,577 Relaxation took 71.3s
2024-12-07 06:13:04,577 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=51.7 pTM=0.337 ipTM=0.168
2024-12-07 06:14:00,979 Relaxation took 56.4s
2024-12-07 06:14:00,979 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=52.8 pTM=0.346 ipTM=0.156
2024-12-07 06:14:53,978 Relaxation took 53.0s
2024-12-07 06:14:53,978 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=53.7 pTM=0.333 ipTM=0.124
2024-12-07 06:14:55,560 Done