2024-12-07 05:26:27,289 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 05:26:27,624 Running on GPU
2024-12-07 05:26:30,495 Found 6 citations for tools or databases
2024-12-07 05:26:30,495 Query 1/1: MKRN1_PABPC5 (length 864)
2024-12-07 05:26:30,782 Sleeping for 9s. Reason: PENDING
2024-12-07 05:26:40,043 Sleeping for 10s. Reason: RUNNING
2024-12-07 05:26:50,301 Sleeping for 10s. Reason: RUNNING
2024-12-07 05:27:00,563 Sleeping for 5s. Reason: RUNNING
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2024-12-07 05:27:31,587 Sleeping for 7s. Reason: RUNNING
2024-12-07 05:27:38,849 Sleeping for 6s. Reason: RUNNING
2024-12-07 05:27:45,109 Sleeping for 7s. Reason: RUNNING
2024-12-07 05:27:52,367 Sleeping for 8s. Reason: RUNNING
2024-12-07 05:28:00,624 Sleeping for 10s. Reason: RUNNING
2024-12-07 05:28:10,881 Sleeping for 6s. Reason: RUNNING
2024-12-07 05:28:17,138 Sleeping for 6s. Reason: RUNNING
2024-12-07 05:28:23,387 Sleeping for 10s. Reason: RUNNING
2024-12-07 05:28:33,648 Sleeping for 6s. Reason: RUNNING
2024-12-07 05:28:39,906 Sleeping for 8s. Reason: RUNNING
2024-12-07 05:28:49,825 Sleeping for 10s. Reason: PENDING
2024-12-07 05:29:00,082 Sleeping for 7s. Reason: RUNNING
2024-12-07 05:29:07,340 Sleeping for 8s. Reason: RUNNING
2024-12-07 05:29:15,601 Sleeping for 9s. Reason: RUNNING
2024-12-07 05:29:24,861 Sleeping for 6s. Reason: RUNNING
2024-12-07 05:29:31,114 Sleeping for 8s. Reason: RUNNING
2024-12-07 05:29:39,374 Sleeping for 7s. Reason: RUNNING
2024-12-07 05:29:46,645 Sleeping for 7s. Reason: RUNNING
2024-12-07 05:29:53,913 Sleeping for 9s. Reason: RUNNING
2024-12-07 05:30:03,179 Sleeping for 7s. Reason: RUNNING
2024-12-07 05:30:10,437 Sleeping for 5s. Reason: RUNNING
2024-12-07 05:30:15,695 Sleeping for 8s. Reason: RUNNING
2024-12-07 05:30:23,960 Sleeping for 8s. Reason: RUNNING
2024-12-07 05:30:35,421 Setting max_seq=508, max_extra_seq=2048
2024-12-07 05:32:44,887 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=54.3 pTM=0.281 ipTM=0.166
2024-12-07 05:32:58,803 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58.9 pTM=0.361 ipTM=0.377 tol=9.09
2024-12-07 05:33:12,745 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=58.8 pTM=0.374 ipTM=0.392 tol=4.43
2024-12-07 05:33:26,695 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=59.4 pTM=0.372 ipTM=0.391 tol=2.08
2024-12-07 05:33:40,715 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=59.8 pTM=0.375 ipTM=0.394 tol=1.53
2024-12-07 05:33:54,766 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=60.1 pTM=0.374 ipTM=0.395 tol=1.46
2024-12-07 05:34:08,801 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59.9 pTM=0.374 ipTM=0.395 tol=2.56
2024-12-07 05:34:22,820 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=60 pTM=0.371 ipTM=0.392 tol=1.9
2024-12-07 05:34:36,843 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.8 pTM=0.373 ipTM=0.394 tol=1.06
2024-12-07 05:34:50,870 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=59.7 pTM=0.372 ipTM=0.393 tol=1.28
2024-12-07 05:35:04,892 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.2 pTM=0.372 ipTM=0.393 tol=2.08
2024-12-07 05:35:18,929 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60 pTM=0.373 ipTM=0.394 tol=1.83
2024-12-07 05:35:32,976 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60 pTM=0.373 ipTM=0.395 tol=2.77
2024-12-07 05:35:47,015 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60 pTM=0.372 ipTM=0.393 tol=1.49
2024-12-07 05:36:01,053 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60 pTM=0.372 ipTM=0.392 tol=2.55
2024-12-07 05:36:15,109 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.2 pTM=0.372 ipTM=0.393 tol=2.98
2024-12-07 05:36:29,159 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.1 pTM=0.371 ipTM=0.39 tol=2.4
2024-12-07 05:36:43,220 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.1 pTM=0.37 ipTM=0.389 tol=2.91
2024-12-07 05:36:57,325 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.2 pTM=0.369 ipTM=0.39 tol=2.76
2024-12-07 05:37:11,392 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60.2 pTM=0.368 ipTM=0.389 tol=2.81
2024-12-07 05:37:25,436 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60.3 pTM=0.371 ipTM=0.393 tol=1.02
2024-12-07 05:37:39,485 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60 pTM=0.37 ipTM=0.392 tol=1.09
2024-12-07 05:37:53,530 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.1 pTM=0.372 ipTM=0.392 tol=1.89
2024-12-07 05:38:07,580 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60 pTM=0.369 ipTM=0.389 tol=2.82
2024-12-07 05:38:21,624 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.4 pTM=0.374 ipTM=0.394 tol=3.56
2024-12-07 05:38:35,677 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.2 pTM=0.372 ipTM=0.395 tol=1.91
2024-12-07 05:38:49,726 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.2 pTM=0.373 ipTM=0.395 tol=3.13
2024-12-07 05:39:03,774 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=59.8 pTM=0.372 ipTM=0.394 tol=3.36
2024-12-07 05:39:17,833 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=59.5 pTM=0.373 ipTM=0.393 tol=3.12
2024-12-07 05:39:31,885 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=59.9 pTM=0.37 ipTM=0.391 tol=3.1
2024-12-07 05:39:45,979 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59.8 pTM=0.373 ipTM=0.394 tol=1.49
2024-12-07 05:39:45,979 alphafold2_multimer_v3_model_1_seed_000 took 545.6s (30 recycles)
2024-12-07 05:40:00,466 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=53.8 pTM=0.292 ipTM=0.176
2024-12-07 05:40:14,460 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=57.4 pTM=0.37 ipTM=0.387 tol=13.1
2024-12-07 05:40:28,444 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=58.3 pTM=0.382 ipTM=0.402 tol=8.52
2024-12-07 05:40:42,421 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=59.1 pTM=0.389 ipTM=0.403 tol=6.48
2024-12-07 05:40:56,383 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60 pTM=0.392 ipTM=0.406 tol=2.5
2024-12-07 05:41:10,350 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=60 pTM=0.392 ipTM=0.407 tol=1.98
2024-12-07 05:41:24,320 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=60.4 pTM=0.396 ipTM=0.409 tol=1.28
2024-12-07 05:41:38,288 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=60.2 pTM=0.395 ipTM=0.408 tol=1.31
2024-12-07 05:41:52,254 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=60.3 pTM=0.395 ipTM=0.409 tol=1.63
2024-12-07 05:42:06,227 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=60.2 pTM=0.395 ipTM=0.408 tol=2.9
2024-12-07 05:42:20,211 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=60.8 pTM=0.396 ipTM=0.41 tol=3.76
2024-12-07 05:42:34,191 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=60.5 pTM=0.393 ipTM=0.406 tol=1.69
2024-12-07 05:42:48,160 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=60.8 pTM=0.398 ipTM=0.411 tol=2.82
2024-12-07 05:43:02,152 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=60.4 pTM=0.395 ipTM=0.407 tol=1.78
2024-12-07 05:43:16,154 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=60.4 pTM=0.399 ipTM=0.41 tol=3.53
2024-12-07 05:43:30,111 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=60.3 pTM=0.398 ipTM=0.41 tol=3.02
2024-12-07 05:43:44,080 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=60.9 pTM=0.403 ipTM=0.411 tol=1.29
2024-12-07 05:43:58,040 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=60.4 pTM=0.399 ipTM=0.408 tol=1.04
2024-12-07 05:44:12,010 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=60.6 pTM=0.401 ipTM=0.41 tol=1.36
2024-12-07 05:44:25,967 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=60.5 pTM=0.399 ipTM=0.41 tol=1
2024-12-07 05:44:39,933 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=60.7 pTM=0.403 ipTM=0.413 tol=1.07
2024-12-07 05:44:53,897 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=60.2 pTM=0.399 ipTM=0.409 tol=1.33
2024-12-07 05:45:07,863 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=60.2 pTM=0.4 ipTM=0.41 tol=1.52
2024-12-07 05:45:21,827 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=60.4 pTM=0.401 ipTM=0.411 tol=1.18
2024-12-07 05:45:35,797 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=60.7 pTM=0.404 ipTM=0.414 tol=1.53
2024-12-07 05:45:49,754 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=60.2 pTM=0.402 ipTM=0.412 tol=1.2
2024-12-07 05:46:03,734 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60.3 pTM=0.403 ipTM=0.412 tol=1.5
2024-12-07 05:46:17,700 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=60.3 pTM=0.402 ipTM=0.413 tol=1.88
2024-12-07 05:46:31,672 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=60.2 pTM=0.4 ipTM=0.41 tol=1.45
2024-12-07 05:46:45,630 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=59.9 pTM=0.399 ipTM=0.41 tol=1.11
2024-12-07 05:46:59,584 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=60.2 pTM=0.4 ipTM=0.412 tol=0.863
2024-12-07 05:46:59,585 alphafold2_multimer_v3_model_2_seed_000 took 433.1s (30 recycles)
2024-12-07 05:47:14,062 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=55.8 pTM=0.277 ipTM=0.142
2024-12-07 05:47:28,033 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=59 pTM=0.347 ipTM=0.353 tol=15.1
2024-12-07 05:47:41,991 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=60.6 pTM=0.363 ipTM=0.389 tol=3.93
2024-12-07 05:47:55,944 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=60.5 pTM=0.37 ipTM=0.397 tol=3.71
2024-12-07 05:48:09,903 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=61.1 pTM=0.375 ipTM=0.402 tol=2.64
2024-12-07 05:48:23,862 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=60.7 pTM=0.372 ipTM=0.401 tol=2.79
2024-12-07 05:48:37,813 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=60.8 pTM=0.375 ipTM=0.404 tol=1.82
2024-12-07 05:48:51,792 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=60.3 pTM=0.374 ipTM=0.403 tol=2.65
2024-12-07 05:49:05,798 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=60.9 pTM=0.379 ipTM=0.405 tol=1.68
2024-12-07 05:49:19,767 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=60.7 pTM=0.376 ipTM=0.403 tol=3.76
2024-12-07 05:49:33,716 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=60.8 pTM=0.379 ipTM=0.404 tol=5.06
2024-12-07 05:49:47,657 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61 pTM=0.383 ipTM=0.406 tol=2.04
2024-12-07 05:50:01,601 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.3 pTM=0.387 ipTM=0.408 tol=1.79
2024-12-07 05:50:15,532 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61.2 pTM=0.388 ipTM=0.407 tol=1.47
2024-12-07 05:50:29,477 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.6 pTM=0.39 ipTM=0.409 tol=1.64
2024-12-07 05:50:43,422 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.6 pTM=0.393 ipTM=0.41 tol=1.7
2024-12-07 05:50:57,366 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.3 pTM=0.389 ipTM=0.408 tol=1.68
2024-12-07 05:51:11,316 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.3 pTM=0.39 ipTM=0.408 tol=1.9
2024-12-07 05:51:25,259 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.5 pTM=0.394 ipTM=0.412 tol=1.64
2024-12-07 05:51:39,205 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.2 pTM=0.39 ipTM=0.409 tol=1.15
2024-12-07 05:51:53,151 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.2 pTM=0.392 ipTM=0.411 tol=1.37
2024-12-07 05:52:07,177 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.3 pTM=0.391 ipTM=0.407 tol=1.25
2024-12-07 05:52:21,129 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.3 pTM=0.391 ipTM=0.409 tol=1.33
2024-12-07 05:52:35,090 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.1 pTM=0.391 ipTM=0.409 tol=1.62
2024-12-07 05:52:49,041 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.3 pTM=0.393 ipTM=0.41 tol=1.28
2024-12-07 05:53:02,997 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.3 pTM=0.393 ipTM=0.411 tol=1.25
2024-12-07 05:53:16,942 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60.9 pTM=0.391 ipTM=0.409 tol=1.09
2024-12-07 05:53:30,895 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.9 pTM=0.39 ipTM=0.407 tol=1
2024-12-07 05:53:44,848 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.6 pTM=0.386 ipTM=0.405 tol=0.943
2024-12-07 05:53:58,802 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.8 pTM=0.392 ipTM=0.408 tol=1.1
2024-12-07 05:54:12,756 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.8 pTM=0.391 ipTM=0.408 tol=0.961
2024-12-07 05:54:12,757 alphafold2_multimer_v3_model_3_seed_000 took 432.7s (30 recycles)
2024-12-07 05:54:27,186 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=51.2 pTM=0.282 ipTM=0.179
2024-12-07 05:54:41,179 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=57 pTM=0.362 ipTM=0.375 tol=14.3
2024-12-07 05:54:55,126 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=57.3 pTM=0.385 ipTM=0.407 tol=9.24
2024-12-07 05:55:09,098 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=57.2 pTM=0.38 ipTM=0.41 tol=5.74
2024-12-07 05:55:23,067 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57 pTM=0.384 ipTM=0.412 tol=2.9
2024-12-07 05:55:37,038 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57.5 pTM=0.381 ipTM=0.413 tol=4.37
2024-12-07 05:55:50,993 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.2 pTM=0.385 ipTM=0.416 tol=2.65
2024-12-07 05:56:04,960 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.2 pTM=0.382 ipTM=0.413 tol=5.7
2024-12-07 05:56:18,920 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=57.4 pTM=0.388 ipTM=0.419 tol=3.53
2024-12-07 05:56:32,880 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.2 pTM=0.384 ipTM=0.415 tol=2
2024-12-07 05:56:46,829 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57 pTM=0.384 ipTM=0.414 tol=2.42
2024-12-07 05:57:00,778 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57.3 pTM=0.384 ipTM=0.412 tol=2.52
2024-12-07 05:57:14,732 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=56.9 pTM=0.383 ipTM=0.415 tol=2.84
2024-12-07 05:57:28,684 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=57.5 pTM=0.385 ipTM=0.415 tol=2.16
2024-12-07 05:57:42,640 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=57.2 pTM=0.383 ipTM=0.414 tol=2.45
2024-12-07 05:57:56,598 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=57.5 pTM=0.384 ipTM=0.414 tol=2.39
2024-12-07 05:58:10,544 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=57.6 pTM=0.384 ipTM=0.414 tol=2.01
2024-12-07 05:58:24,502 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=57.7 pTM=0.385 ipTM=0.415 tol=2.66
2024-12-07 05:58:38,454 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=58 pTM=0.385 ipTM=0.415 tol=1.89
2024-12-07 05:58:52,409 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=57.8 pTM=0.387 ipTM=0.417 tol=2.03
2024-12-07 05:59:06,375 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=57.7 pTM=0.387 ipTM=0.417 tol=3.34
2024-12-07 05:59:20,328 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=57.8 pTM=0.386 ipTM=0.414 tol=2.52
2024-12-07 05:59:34,282 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=57.7 pTM=0.385 ipTM=0.416 tol=2.61
2024-12-07 05:59:48,244 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=57.7 pTM=0.387 ipTM=0.417 tol=2.33
2024-12-07 06:00:02,199 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=57.8 pTM=0.387 ipTM=0.417 tol=2.72
2024-12-07 06:00:16,147 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57.8 pTM=0.388 ipTM=0.418 tol=2.58
2024-12-07 06:00:30,094 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57.4 pTM=0.386 ipTM=0.416 tol=2.71
2024-12-07 06:00:44,041 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=57.5 pTM=0.386 ipTM=0.416 tol=2.9
2024-12-07 06:00:57,985 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=57.5 pTM=0.387 ipTM=0.416 tol=2.46
2024-12-07 06:01:11,990 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57.3 pTM=0.39 ipTM=0.418 tol=2.04
2024-12-07 06:01:25,952 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=57.7 pTM=0.386 ipTM=0.416 tol=2.33
2024-12-07 06:01:25,952 alphafold2_multimer_v3_model_4_seed_000 took 432.7s (30 recycles)
2024-12-07 06:01:40,483 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=55.8 pTM=0.33 ipTM=0.3
2024-12-07 06:01:54,496 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=58.7 pTM=0.375 ipTM=0.387 tol=8.78
2024-12-07 06:02:08,517 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58.1 pTM=0.385 ipTM=0.402 tol=5.15
2024-12-07 06:02:22,555 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=58 pTM=0.384 ipTM=0.401 tol=5.76
2024-12-07 06:02:36,580 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=59.1 pTM=0.389 ipTM=0.407 tol=5.12
2024-12-07 06:02:50,608 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=58.5 pTM=0.386 ipTM=0.407 tol=4.54
2024-12-07 06:03:04,647 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=58.7 pTM=0.398 ipTM=0.412 tol=4.56
2024-12-07 06:03:18,679 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=58.2 pTM=0.389 ipTM=0.408 tol=4.06
2024-12-07 06:03:32,712 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=57.9 pTM=0.396 ipTM=0.41 tol=5.3
2024-12-07 06:03:46,747 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=58.2 pTM=0.391 ipTM=0.408 tol=4.56
2024-12-07 06:04:00,779 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=58.4 pTM=0.396 ipTM=0.412 tol=2.66
2024-12-07 06:04:14,887 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=58.5 pTM=0.39 ipTM=0.408 tol=2.66
2024-12-07 06:04:28,932 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=58.2 pTM=0.395 ipTM=0.411 tol=3.52
2024-12-07 06:04:42,971 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=58.7 pTM=0.388 ipTM=0.408 tol=2.26
2024-12-07 06:04:57,007 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=59.2 pTM=0.397 ipTM=0.412 tol=2.65
2024-12-07 06:05:11,036 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=58.6 pTM=0.392 ipTM=0.409 tol=1.52
2024-12-07 06:05:25,066 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=58.7 pTM=0.394 ipTM=0.41 tol=2.71
2024-12-07 06:05:39,110 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=58.5 pTM=0.389 ipTM=0.408 tol=3.19
2024-12-07 06:05:53,141 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=58.8 pTM=0.394 ipTM=0.411 tol=2.64
2024-12-07 06:06:07,177 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=58.2 pTM=0.39 ipTM=0.408 tol=3.11
2024-12-07 06:06:21,220 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=59.1 pTM=0.398 ipTM=0.415 tol=2.59
2024-12-07 06:06:35,262 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=58.2 pTM=0.389 ipTM=0.407 tol=2.81
2024-12-07 06:06:49,310 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58 pTM=0.399 ipTM=0.411 tol=3.27
2024-12-07 06:07:03,348 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58.2 pTM=0.394 ipTM=0.409 tol=2.8
2024-12-07 06:07:17,417 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=58.3 pTM=0.398 ipTM=0.412 tol=1.99
2024-12-07 06:07:31,482 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=57.8 pTM=0.391 ipTM=0.407 tol=2.66
2024-12-07 06:07:45,547 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58 pTM=0.394 ipTM=0.407 tol=1.45
2024-12-07 06:07:59,591 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=57.7 pTM=0.389 ipTM=0.405 tol=2.99
2024-12-07 06:08:13,624 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=57.8 pTM=0.395 ipTM=0.409 tol=3.04
2024-12-07 06:08:27,673 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=57.5 pTM=0.389 ipTM=0.406 tol=2.67
2024-12-07 06:08:41,711 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=58.2 pTM=0.398 ipTM=0.412 tol=3.28
2024-12-07 06:08:41,711 alphafold2_multimer_v3_model_5_seed_000 took 435.3s (30 recycles)
2024-12-07 06:08:42,183 reranking models by 'multimer' metric
2024-12-07 06:08:44,320 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 06:09:41,482 Relaxation took 59.3s
2024-12-07 06:09:41,482 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=57.7 pTM=0.386 ipTM=0.416
2024-12-07 06:10:20,029 Relaxation took 38.5s
2024-12-07 06:10:20,029 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=58.2 pTM=0.398 ipTM=0.412
2024-12-07 06:11:13,309 Relaxation took 53.3s
2024-12-07 06:11:13,309 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=60.2 pTM=0.4 ipTM=0.412
2024-12-07 06:12:10,231 Relaxation took 56.9s
2024-12-07 06:12:10,232 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.8 pTM=0.391 ipTM=0.408
2024-12-07 06:13:07,560 Relaxation took 57.3s
2024-12-07 06:13:07,560 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.8 pTM=0.373 ipTM=0.394
2024-12-07 06:13:09,136 Done