2024-12-07 05:45:02,285 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 05:45:02,593 Running on GPU
2024-12-07 05:45:06,151 Found 6 citations for tools or databases
2024-12-07 05:45:06,151 Query 1/1: MKRN2_C11orf57 (length 708)
2024-12-07 05:45:06,441 Sleeping for 7s. Reason: PENDING
2024-12-07 05:45:13,709 Sleeping for 10s. Reason: RUNNING
2024-12-07 05:45:23,972 Sleeping for 7s. Reason: RUNNING
2024-12-07 05:45:31,227 Sleeping for 6s. Reason: RUNNING
2024-12-07 05:45:37,488 Sleeping for 10s. Reason: RUNNING
2024-12-07 05:45:47,750 Sleeping for 9s. Reason: RUNNING
2024-12-07 05:45:57,019 Sleeping for 5s. Reason: RUNNING
2024-12-07 05:46:02,283 Sleeping for 9s. Reason: RUNNING
2024-12-07 05:46:11,544 Sleeping for 7s. Reason: RUNNING
2024-12-07 05:46:18,803 Sleeping for 10s. Reason: RUNNING
2024-12-07 05:46:30,527 Sleeping for 5s. Reason: PENDING
2024-12-07 05:46:35,790 Sleeping for 9s. Reason: RUNNING
2024-12-07 05:46:45,051 Sleeping for 6s. Reason: RUNNING
2024-12-07 05:46:51,309 Sleeping for 7s. Reason: RUNNING
2024-12-07 05:46:58,578 Sleeping for 7s. Reason: RUNNING
2024-12-07 05:47:05,837 Sleeping for 6s. Reason: RUNNING
2024-12-07 05:47:12,088 Sleeping for 8s. Reason: RUNNING
2024-12-07 05:47:20,356 Sleeping for 5s. Reason: RUNNING
2024-12-07 05:47:27,589 Setting max_seq=508, max_extra_seq=2048
2024-12-07 05:49:46,234 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=42.3 pTM=0.313 ipTM=0.143
2024-12-07 05:49:56,447 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=43.1 pTM=0.333 ipTM=0.278 tol=15.5
2024-12-07 05:50:06,662 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=42.6 pTM=0.32 ipTM=0.176 tol=5
2024-12-07 05:50:16,878 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=42.4 pTM=0.319 ipTM=0.17 tol=4.42
2024-12-07 05:50:27,131 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=42.4 pTM=0.314 ipTM=0.144 tol=2.93
2024-12-07 05:50:37,400 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=42.6 pTM=0.312 ipTM=0.147 tol=3.16
2024-12-07 05:50:47,668 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=42.6 pTM=0.313 ipTM=0.146 tol=2.38
2024-12-07 05:50:57,945 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=42.7 pTM=0.314 ipTM=0.141 tol=2.55
2024-12-07 05:51:08,225 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=42.5 pTM=0.313 ipTM=0.134 tol=3.46
2024-12-07 05:51:18,514 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=42.5 pTM=0.315 ipTM=0.139 tol=4.11
2024-12-07 05:51:28,789 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=42.3 pTM=0.316 ipTM=0.139 tol=2.96
2024-12-07 05:51:39,081 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=42.4 pTM=0.312 ipTM=0.133 tol=2.66
2024-12-07 05:51:49,384 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=42.5 pTM=0.313 ipTM=0.135 tol=2.97
2024-12-07 05:51:59,683 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=42.8 pTM=0.315 ipTM=0.134 tol=3.33
2024-12-07 05:52:09,985 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=42.8 pTM=0.313 ipTM=0.138 tol=8.85
2024-12-07 05:52:20,279 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=41.9 pTM=0.321 ipTM=0.147 tol=7.91
2024-12-07 05:52:30,577 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=42.4 pTM=0.319 ipTM=0.142 tol=6.06
2024-12-07 05:52:40,872 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=42 pTM=0.317 ipTM=0.142 tol=5.65
2024-12-07 05:52:51,195 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=41.8 pTM=0.315 ipTM=0.142 tol=5.04
2024-12-07 05:53:01,504 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=42 pTM=0.315 ipTM=0.136 tol=5.89
2024-12-07 05:53:11,809 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=42.1 pTM=0.316 ipTM=0.14 tol=7
2024-12-07 05:53:22,112 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=42.5 pTM=0.315 ipTM=0.139 tol=6.17
2024-12-07 05:53:32,430 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=42.5 pTM=0.319 ipTM=0.14 tol=4.13
2024-12-07 05:53:42,745 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=42.2 pTM=0.316 ipTM=0.138 tol=3.66
2024-12-07 05:53:53,054 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=42 pTM=0.315 ipTM=0.141 tol=5.29
2024-12-07 05:54:03,369 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=42.3 pTM=0.316 ipTM=0.137 tol=4.54
2024-12-07 05:54:13,687 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=42.3 pTM=0.317 ipTM=0.146 tol=3.07
2024-12-07 05:54:24,004 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=42.4 pTM=0.318 ipTM=0.142 tol=2.64
2024-12-07 05:54:34,300 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=41.9 pTM=0.317 ipTM=0.149 tol=4.59
2024-12-07 05:54:44,608 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=41.4 pTM=0.317 ipTM=0.14 tol=5.39
2024-12-07 05:54:54,924 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=41.9 pTM=0.313 ipTM=0.137 tol=4.1
2024-12-07 05:54:54,925 alphafold2_multimer_v3_model_1_seed_000 took 442.2s (30 recycles)
2024-12-07 05:55:05,573 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=42.7 pTM=0.319 ipTM=0.127
2024-12-07 05:55:15,896 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=44.1 pTM=0.319 ipTM=0.121 tol=21.8
2024-12-07 05:55:26,233 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=43.9 pTM=0.318 ipTM=0.132 tol=11.6
2024-12-07 05:55:36,568 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=44.4 pTM=0.32 ipTM=0.129 tol=9.2
2024-12-07 05:55:46,910 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=44.4 pTM=0.32 ipTM=0.13 tol=7.97
2024-12-07 05:55:57,256 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=44.8 pTM=0.32 ipTM=0.14 tol=8.77
2024-12-07 05:56:07,594 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=44.7 pTM=0.319 ipTM=0.128 tol=4.09
2024-12-07 05:56:17,940 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=44.6 pTM=0.321 ipTM=0.135 tol=3.82
2024-12-07 05:56:28,283 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=44.3 pTM=0.321 ipTM=0.137 tol=2.64
2024-12-07 05:56:38,610 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=44.9 pTM=0.325 ipTM=0.152 tol=3.17
2024-12-07 05:56:48,948 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=44.2 pTM=0.321 ipTM=0.139 tol=2.16
2024-12-07 05:56:59,283 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=44.3 pTM=0.323 ipTM=0.153 tol=4.71
2024-12-07 05:57:09,626 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=44.2 pTM=0.32 ipTM=0.144 tol=4.51
2024-12-07 05:57:19,961 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=44.7 pTM=0.322 ipTM=0.14 tol=3.75
2024-12-07 05:57:30,305 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=44.4 pTM=0.319 ipTM=0.132 tol=3.11
2024-12-07 05:57:40,649 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=44.3 pTM=0.318 ipTM=0.148 tol=5.31
2024-12-07 05:57:50,987 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=44.7 pTM=0.32 ipTM=0.143 tol=6.1
2024-12-07 05:58:01,334 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=44.7 pTM=0.32 ipTM=0.136 tol=5.41
2024-12-07 05:58:11,671 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=44.1 pTM=0.317 ipTM=0.14 tol=4.95
2024-12-07 05:58:22,019 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=44.6 pTM=0.319 ipTM=0.135 tol=6.35
2024-12-07 05:58:32,357 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=44.2 pTM=0.317 ipTM=0.152 tol=7.21
2024-12-07 05:58:42,713 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=45.1 pTM=0.32 ipTM=0.142 tol=7.46
2024-12-07 05:58:53,063 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=44.8 pTM=0.319 ipTM=0.138 tol=4.84
2024-12-07 05:59:03,412 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=44.6 pTM=0.317 ipTM=0.14 tol=4.36
2024-12-07 05:59:13,761 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=44.7 pTM=0.316 ipTM=0.137 tol=6.89
2024-12-07 05:59:24,115 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=45.1 pTM=0.316 ipTM=0.141 tol=3.49
2024-12-07 05:59:34,466 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=44.8 pTM=0.317 ipTM=0.133 tol=3.41
2024-12-07 05:59:44,797 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=44.5 pTM=0.323 ipTM=0.149 tol=6.97
2024-12-07 05:59:55,136 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=44.6 pTM=0.318 ipTM=0.136 tol=11.2
2024-12-07 06:00:05,488 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=44.7 pTM=0.317 ipTM=0.136 tol=7.03
2024-12-07 06:00:15,828 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=45 pTM=0.317 ipTM=0.131 tol=3.68
2024-12-07 06:00:15,829 alphafold2_multimer_v3_model_2_seed_000 took 320.6s (30 recycles)
2024-12-07 06:00:26,534 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=40.8 pTM=0.312 ipTM=0.153
2024-12-07 06:00:36,886 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=41 pTM=0.32 ipTM=0.133 tol=17.5
2024-12-07 06:00:47,257 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=41.3 pTM=0.318 ipTM=0.134 tol=12
2024-12-07 06:00:57,621 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=41 pTM=0.324 ipTM=0.13 tol=5.96
2024-12-07 06:01:07,980 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=40.8 pTM=0.33 ipTM=0.165 tol=5.79
2024-12-07 06:01:18,348 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=42 pTM=0.328 ipTM=0.143 tol=6.67
2024-12-07 06:01:28,713 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=41.1 pTM=0.322 ipTM=0.144 tol=8.39
2024-12-07 06:01:39,082 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=41.8 pTM=0.321 ipTM=0.126 tol=6.48
2024-12-07 06:01:49,455 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=41.5 pTM=0.324 ipTM=0.143 tol=3.37
2024-12-07 06:01:59,829 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=41.8 pTM=0.325 ipTM=0.143 tol=3.27
2024-12-07 06:02:10,194 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=40.9 pTM=0.321 ipTM=0.143 tol=4.11
2024-12-07 06:02:20,566 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=41.7 pTM=0.324 ipTM=0.131 tol=3.58
2024-12-07 06:02:30,935 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=41.2 pTM=0.326 ipTM=0.145 tol=4.5
2024-12-07 06:02:41,318 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=42.3 pTM=0.324 ipTM=0.136 tol=6.62
2024-12-07 06:02:51,696 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=41.2 pTM=0.318 ipTM=0.128 tol=4.82
2024-12-07 06:03:02,070 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=42.3 pTM=0.327 ipTM=0.136 tol=6.3
2024-12-07 06:03:12,436 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=41.2 pTM=0.325 ipTM=0.153 tol=5.4
2024-12-07 06:03:22,810 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=41.8 pTM=0.325 ipTM=0.143 tol=6.86
2024-12-07 06:03:33,193 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=42.2 pTM=0.322 ipTM=0.144 tol=5.47
2024-12-07 06:03:43,579 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=42.3 pTM=0.328 ipTM=0.146 tol=3.89
2024-12-07 06:03:53,963 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=41.5 pTM=0.323 ipTM=0.144 tol=7.52
2024-12-07 06:04:04,344 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=41.8 pTM=0.321 ipTM=0.131 tol=5.91
2024-12-07 06:04:14,739 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=42.1 pTM=0.327 ipTM=0.145 tol=4.02
2024-12-07 06:04:25,127 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=42.3 pTM=0.326 ipTM=0.149 tol=6.18
2024-12-07 06:04:35,531 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=41.7 pTM=0.323 ipTM=0.145 tol=6.26
2024-12-07 06:04:45,952 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=42.6 pTM=0.324 ipTM=0.126 tol=9.55
2024-12-07 06:04:56,362 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=41.8 pTM=0.326 ipTM=0.158 tol=8.19
2024-12-07 06:05:06,781 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=43 pTM=0.331 ipTM=0.156 tol=7.2
2024-12-07 06:05:17,198 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=41.7 pTM=0.325 ipTM=0.148 tol=9.6
2024-12-07 06:05:27,614 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=42.3 pTM=0.33 ipTM=0.138 tol=7.27
2024-12-07 06:05:38,027 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=42.1 pTM=0.324 ipTM=0.144 tol=3.38
2024-12-07 06:05:38,027 alphafold2_multimer_v3_model_3_seed_000 took 321.9s (30 recycles)
2024-12-07 06:05:48,694 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=41.1 pTM=0.332 ipTM=0.171
2024-12-07 06:05:59,058 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=41.3 pTM=0.329 ipTM=0.19 tol=11.7
2024-12-07 06:06:09,432 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=41.5 pTM=0.334 ipTM=0.164 tol=12.2
2024-12-07 06:06:19,805 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=40 pTM=0.33 ipTM=0.16 tol=9.16
2024-12-07 06:06:30,180 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=41 pTM=0.329 ipTM=0.137 tol=7.71
2024-12-07 06:06:40,555 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=40.7 pTM=0.323 ipTM=0.161 tol=10.1
2024-12-07 06:06:50,920 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=40.4 pTM=0.328 ipTM=0.157 tol=8.48
2024-12-07 06:07:01,273 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=41.1 pTM=0.33 ipTM=0.14 tol=5.09
2024-12-07 06:07:11,629 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=41.2 pTM=0.332 ipTM=0.133 tol=3.63
2024-12-07 06:07:21,984 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=41.1 pTM=0.331 ipTM=0.152 tol=4.88
2024-12-07 06:07:32,336 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=41.4 pTM=0.331 ipTM=0.134 tol=5.8
2024-12-07 06:07:42,680 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=41.2 pTM=0.331 ipTM=0.14 tol=6.61
2024-12-07 06:07:53,037 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=41.3 pTM=0.336 ipTM=0.161 tol=10.5
2024-12-07 06:08:03,391 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=40.9 pTM=0.334 ipTM=0.162 tol=9.51
2024-12-07 06:08:13,749 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=40.8 pTM=0.329 ipTM=0.143 tol=5.05
2024-12-07 06:08:24,104 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=40.8 pTM=0.332 ipTM=0.145 tol=5.16
2024-12-07 06:08:34,453 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=40.6 pTM=0.328 ipTM=0.144 tol=6.7
2024-12-07 06:08:44,809 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=40.6 pTM=0.326 ipTM=0.146 tol=8.12
2024-12-07 06:08:55,170 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=41.3 pTM=0.33 ipTM=0.143 tol=3.93
2024-12-07 06:09:05,519 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=41 pTM=0.328 ipTM=0.161 tol=4.21
2024-12-07 06:09:15,880 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=40.8 pTM=0.33 ipTM=0.147 tol=4.02
2024-12-07 06:09:26,227 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=41.2 pTM=0.329 ipTM=0.138 tol=2.42
2024-12-07 06:09:36,587 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=40.9 pTM=0.33 ipTM=0.141 tol=3.28
2024-12-07 06:09:46,950 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=40.6 pTM=0.331 ipTM=0.142 tol=3.91
2024-12-07 06:09:57,303 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=41.1 pTM=0.333 ipTM=0.14 tol=3.87
2024-12-07 06:10:07,661 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=41.1 pTM=0.33 ipTM=0.155 tol=6.84
2024-12-07 06:10:18,013 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=40.4 pTM=0.331 ipTM=0.15 tol=5.8
2024-12-07 06:10:28,372 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=40.8 pTM=0.329 ipTM=0.14 tol=3.15
2024-12-07 06:10:38,726 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=41.1 pTM=0.332 ipTM=0.146 tol=4.73
2024-12-07 06:10:49,066 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=40.6 pTM=0.333 ipTM=0.147 tol=4.81
2024-12-07 06:10:59,416 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=40.5 pTM=0.329 ipTM=0.144 tol=3.94
2024-12-07 06:10:59,417 alphafold2_multimer_v3_model_4_seed_000 took 321.1s (30 recycles)
2024-12-07 06:11:10,176 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=41 pTM=0.307 ipTM=0.13
2024-12-07 06:11:20,579 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=41.6 pTM=0.324 ipTM=0.149 tol=15.9
2024-12-07 06:11:31,003 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=42.5 pTM=0.325 ipTM=0.131 tol=9.01
2024-12-07 06:11:41,414 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=42.7 pTM=0.331 ipTM=0.128 tol=5.16
2024-12-07 06:11:51,821 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=42.2 pTM=0.328 ipTM=0.132 tol=3.7
2024-12-07 06:12:02,237 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=43.3 pTM=0.327 ipTM=0.12 tol=6.43
2024-12-07 06:12:12,648 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=42.6 pTM=0.324 ipTM=0.125 tol=5.77
2024-12-07 06:12:23,065 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=43.1 pTM=0.33 ipTM=0.131 tol=7.64
2024-12-07 06:12:33,481 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=42.8 pTM=0.325 ipTM=0.123 tol=6.66
2024-12-07 06:12:43,889 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=43.1 pTM=0.33 ipTM=0.123 tol=7.5
2024-12-07 06:12:54,303 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=42.3 pTM=0.327 ipTM=0.13 tol=4.36
2024-12-07 06:13:04,720 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=43.2 pTM=0.328 ipTM=0.118 tol=4.86
2024-12-07 06:13:15,134 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=42.8 pTM=0.327 ipTM=0.127 tol=6.09
2024-12-07 06:13:25,557 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=43.2 pTM=0.327 ipTM=0.118 tol=6.86
2024-12-07 06:13:35,971 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=43 pTM=0.33 ipTM=0.123 tol=7.64
2024-12-07 06:13:46,392 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=43 pTM=0.33 ipTM=0.119 tol=7.84
2024-12-07 06:13:56,809 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=42.8 pTM=0.329 ipTM=0.123 tol=7.51
2024-12-07 06:14:07,232 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=43.4 pTM=0.332 ipTM=0.122 tol=3.21
2024-12-07 06:14:17,652 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=43.5 pTM=0.329 ipTM=0.121 tol=6.05
2024-12-07 06:14:28,078 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=43.5 pTM=0.332 ipTM=0.127 tol=4.3
2024-12-07 06:14:38,512 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=43.3 pTM=0.33 ipTM=0.124 tol=2.69
2024-12-07 06:14:48,928 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=43.5 pTM=0.334 ipTM=0.127 tol=3.3
2024-12-07 06:14:59,352 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=43.6 pTM=0.332 ipTM=0.123 tol=3.03
2024-12-07 06:15:09,775 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=43.2 pTM=0.33 ipTM=0.125 tol=4.66
2024-12-07 06:15:20,204 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=43.2 pTM=0.33 ipTM=0.125 tol=2.7
2024-12-07 06:15:30,629 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=43.3 pTM=0.33 ipTM=0.127 tol=5.44
2024-12-07 06:15:41,061 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=42.8 pTM=0.333 ipTM=0.136 tol=5.07
2024-12-07 06:15:51,483 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=43.1 pTM=0.335 ipTM=0.142 tol=6.21
2024-12-07 06:16:01,905 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=43 pTM=0.333 ipTM=0.127 tol=3.51
2024-12-07 06:16:12,322 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=43.1 pTM=0.336 ipTM=0.141 tol=3.05
2024-12-07 06:16:22,735 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=43.2 pTM=0.337 ipTM=0.145 tol=4.48
2024-12-07 06:16:22,736 alphafold2_multimer_v3_model_5_seed_000 took 323.0s (30 recycles)
2024-12-07 06:16:23,057 reranking models by 'multimer' metric
2024-12-07 06:16:26,093 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 06:17:28,074 Relaxation took 65.0s
2024-12-07 06:17:28,074 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=43.2 pTM=0.337 ipTM=0.145
2024-12-07 06:18:23,580 Relaxation took 55.5s
2024-12-07 06:18:23,580 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=40.5 pTM=0.329 ipTM=0.144
2024-12-07 06:19:15,292 Relaxation took 51.7s
2024-12-07 06:19:15,292 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=42.1 pTM=0.324 ipTM=0.144
2024-12-07 06:20:16,571 Relaxation took 61.3s
2024-12-07 06:20:16,571 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=41.9 pTM=0.313 ipTM=0.137
2024-12-07 06:21:01,348 Relaxation took 44.8s
2024-12-07 06:21:01,348 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=45 pTM=0.317 ipTM=0.131
2024-12-07 06:21:02,585 Done