2024-12-07 06:09:31,616 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 06:09:31,983 Running on GPU
2024-12-07 06:09:35,835 Found 6 citations for tools or databases
2024-12-07 06:09:35,835 Query 1/1: MKRN2_ELAVL2 (length 775)
2024-12-07 06:09:36,166 Sleeping for 9s. Reason: PENDING
2024-12-07 06:09:45,425 Sleeping for 8s. Reason: RUNNING
2024-12-07 06:09:53,681 Sleeping for 5s. Reason: RUNNING
2024-12-07 06:09:58,935 Sleeping for 9s. Reason: RUNNING
2024-12-07 06:10:08,190 Sleeping for 10s. Reason: RUNNING
2024-12-07 06:10:18,464 Sleeping for 9s. Reason: RUNNING
2024-12-07 06:10:27,719 Sleeping for 5s. Reason: RUNNING
2024-12-07 06:10:32,983 Sleeping for 8s. Reason: RUNNING
2024-12-07 06:10:41,247 Sleeping for 8s. Reason: RUNNING
2024-12-07 06:10:49,508 Sleeping for 10s. Reason: RUNNING
2024-12-07 06:10:59,770 Sleeping for 6s. Reason: RUNNING
2024-12-07 06:11:06,033 Sleeping for 5s. Reason: RUNNING
2024-12-07 06:11:11,288 Sleeping for 9s. Reason: RUNNING
2024-12-07 06:11:20,554 Sleeping for 7s. Reason: RUNNING
2024-12-07 06:11:27,814 Sleeping for 10s. Reason: RUNNING
2024-12-07 06:11:38,075 Sleeping for 6s. Reason: RUNNING
2024-12-07 06:11:44,347 Sleeping for 9s. Reason: RUNNING
2024-12-07 06:11:53,609 Sleeping for 7s. Reason: RUNNING
2024-12-07 06:12:00,872 Sleeping for 8s. Reason: RUNNING
2024-12-07 06:12:09,136 Sleeping for 9s. Reason: RUNNING
2024-12-07 06:12:18,397 Sleeping for 6s. Reason: RUNNING
2024-12-07 06:12:26,516 Sleeping for 9s. Reason: PENDING
2024-12-07 06:12:35,777 Sleeping for 8s. Reason: RUNNING
2024-12-07 06:12:44,036 Sleeping for 6s. Reason: RUNNING
2024-12-07 06:12:50,294 Sleeping for 7s. Reason: RUNNING
2024-12-07 06:12:57,557 Sleeping for 8s. Reason: RUNNING
2024-12-07 06:13:05,813 Sleeping for 10s. Reason: RUNNING
2024-12-07 06:13:16,073 Sleeping for 5s. Reason: RUNNING
2024-12-07 06:13:21,477 Sleeping for 5s. Reason: RUNNING
2024-12-07 06:13:26,735 Sleeping for 6s. Reason: RUNNING
2024-12-07 06:13:32,986 Sleeping for 7s. Reason: RUNNING
2024-12-07 06:13:40,244 Sleeping for 9s. Reason: RUNNING
2024-12-07 06:13:54,133 Setting max_seq=508, max_extra_seq=2048
2024-12-07 06:17:25,807 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=53.4 pTM=0.311 ipTM=0.166
2024-12-07 06:17:41,042 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=53.1 pTM=0.301 ipTM=0.155 tol=9.2
2024-12-07 06:17:56,306 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=54.9 pTM=0.309 ipTM=0.157 tol=9.08
2024-12-07 06:18:11,570 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=54.6 pTM=0.304 ipTM=0.152 tol=5.31
2024-12-07 06:18:26,839 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=56.3 pTM=0.343 ipTM=0.231 tol=6.3
2024-12-07 06:18:42,117 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=59.5 pTM=0.409 ipTM=0.374 tol=3.68
2024-12-07 06:18:57,381 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=60.4 pTM=0.458 ipTM=0.445 tol=3.29
2024-12-07 06:19:12,669 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61 pTM=0.473 ipTM=0.479 tol=2.27
2024-12-07 06:19:27,938 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=62.6 pTM=0.515 ipTM=0.555 tol=1.28
2024-12-07 06:19:43,213 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=62.8 pTM=0.521 ipTM=0.582 tol=1.68
2024-12-07 06:19:58,487 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=62.9 pTM=0.522 ipTM=0.579 tol=1.07
2024-12-07 06:20:13,762 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62.9 pTM=0.524 ipTM=0.588 tol=0.724
2024-12-07 06:20:29,038 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=63 pTM=0.525 ipTM=0.581 tol=0.778
2024-12-07 06:20:44,319 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=62.4 pTM=0.517 ipTM=0.577 tol=0.826
2024-12-07 06:20:59,601 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=62.4 pTM=0.512 ipTM=0.565 tol=0.677
2024-12-07 06:21:14,880 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=62.8 pTM=0.521 ipTM=0.583 tol=0.62
2024-12-07 06:21:30,169 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=63.2 pTM=0.521 ipTM=0.575 tol=0.674
2024-12-07 06:21:45,456 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=62.9 pTM=0.523 ipTM=0.588 tol=0.805
2024-12-07 06:22:00,745 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=62.4 pTM=0.514 ipTM=0.568 tol=0.922
2024-12-07 06:22:16,034 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=62.8 pTM=0.524 ipTM=0.588 tol=0.712
2024-12-07 06:22:31,312 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=62.5 pTM=0.517 ipTM=0.571 tol=1.15
2024-12-07 06:22:46,585 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=62.7 pTM=0.52 ipTM=0.578 tol=1.16
2024-12-07 06:23:01,868 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=62.8 pTM=0.516 ipTM=0.566 tol=0.816
2024-12-07 06:23:17,148 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=62.4 pTM=0.513 ipTM=0.567 tol=0.814
2024-12-07 06:23:32,427 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=62.7 pTM=0.514 ipTM=0.558 tol=1.04
2024-12-07 06:23:47,713 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=62.6 pTM=0.515 ipTM=0.565 tol=0.628
2024-12-07 06:24:02,996 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=62.3 pTM=0.51 ipTM=0.558 tol=0.971
2024-12-07 06:24:18,286 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=62.5 pTM=0.512 ipTM=0.564 tol=0.904
2024-12-07 06:24:33,569 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=62.3 pTM=0.509 ipTM=0.552 tol=0.627
2024-12-07 06:24:48,854 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=62.3 pTM=0.515 ipTM=0.569 tol=0.647
2024-12-07 06:25:04,137 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=62.8 pTM=0.517 ipTM=0.567 tol=0.597
2024-12-07 06:25:04,138 alphafold2_multimer_v3_model_1_seed_000 took 663.3s (30 recycles)
2024-12-07 06:25:19,949 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=53.3 pTM=0.312 ipTM=0.171
2024-12-07 06:25:35,300 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55.5 pTM=0.336 ipTM=0.182 tol=12.1
2024-12-07 06:25:50,649 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=56.6 pTM=0.33 ipTM=0.209 tol=7.66
2024-12-07 06:26:06,006 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=60.7 pTM=0.405 ipTM=0.414 tol=6.16
2024-12-07 06:26:21,336 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60.4 pTM=0.406 ipTM=0.394 tol=3.18
2024-12-07 06:26:36,665 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=61.7 pTM=0.436 ipTM=0.42 tol=1.65
2024-12-07 06:26:51,986 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=61.1 pTM=0.44 ipTM=0.411 tol=1.6
2024-12-07 06:27:07,308 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.2 pTM=0.475 ipTM=0.451 tol=1.27
2024-12-07 06:27:22,662 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.1 pTM=0.481 ipTM=0.479 tol=1.6
2024-12-07 06:27:37,989 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62.2 pTM=0.486 ipTM=0.484 tol=1.01
2024-12-07 06:27:53,313 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.1 pTM=0.489 ipTM=0.5 tol=1.43
2024-12-07 06:28:08,643 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=62.3 pTM=0.499 ipTM=0.517 tol=1.92
2024-12-07 06:28:23,971 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=62.2 pTM=0.498 ipTM=0.517 tol=3.58
2024-12-07 06:28:39,307 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.2 pTM=0.503 ipTM=0.527 tol=4.46
2024-12-07 06:28:54,640 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.1 pTM=0.499 ipTM=0.523 tol=4.91
2024-12-07 06:29:10,006 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.3 pTM=0.505 ipTM=0.528 tol=2
2024-12-07 06:29:25,404 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.4 pTM=0.506 ipTM=0.532 tol=1.17
2024-12-07 06:29:40,814 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.6 pTM=0.512 ipTM=0.539 tol=1.31
2024-12-07 06:29:56,225 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61.8 pTM=0.5 ipTM=0.527 tol=1.41
2024-12-07 06:30:11,636 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.2 pTM=0.509 ipTM=0.538 tol=1.01
2024-12-07 06:30:27,044 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=61.9 pTM=0.501 ipTM=0.529 tol=1.09
2024-12-07 06:30:42,448 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.4 pTM=0.509 ipTM=0.537 tol=1.02
2024-12-07 06:30:57,826 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.1 pTM=0.5 ipTM=0.529 tol=1.03
2024-12-07 06:31:13,188 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.1 pTM=0.504 ipTM=0.529 tol=1.26
2024-12-07 06:31:28,541 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.1 pTM=0.498 ipTM=0.516 tol=1.11
2024-12-07 06:31:43,888 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.3 pTM=0.501 ipTM=0.516 tol=1.02
2024-12-07 06:31:59,231 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=61.8 pTM=0.494 ipTM=0.515 tol=1.33
2024-12-07 06:32:14,602 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.5 pTM=0.51 ipTM=0.534 tol=1.24
2024-12-07 06:32:29,963 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.2 pTM=0.506 ipTM=0.536 tol=1.24
2024-12-07 06:32:45,333 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.3 pTM=0.512 ipTM=0.54 tol=1.37
2024-12-07 06:33:00,676 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.1 pTM=0.506 ipTM=0.537 tol=1.86
2024-12-07 06:33:00,677 alphafold2_multimer_v3_model_2_seed_000 took 476.1s (30 recycles)
2024-12-07 06:33:16,575 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=54.9 pTM=0.321 ipTM=0.191
2024-12-07 06:33:32,001 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=53.8 pTM=0.305 ipTM=0.142 tol=13.3
2024-12-07 06:33:47,416 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=52.1 pTM=0.307 ipTM=0.145 tol=11.7
2024-12-07 06:34:02,785 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=53.4 pTM=0.31 ipTM=0.138 tol=9.2
2024-12-07 06:34:18,169 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=53.5 pTM=0.325 ipTM=0.214 tol=6.81
2024-12-07 06:34:33,600 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=54.2 pTM=0.309 ipTM=0.132 tol=8.06
2024-12-07 06:34:49,019 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.1 pTM=0.316 ipTM=0.139 tol=4.99
2024-12-07 06:35:04,402 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.2 pTM=0.38 ipTM=0.382 tol=6.8
2024-12-07 06:35:19,779 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=58 pTM=0.387 ipTM=0.404 tol=3.48
2024-12-07 06:35:35,158 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.8 pTM=0.375 ipTM=0.384 tol=4.41
2024-12-07 06:35:50,543 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=58.1 pTM=0.382 ipTM=0.391 tol=2.51
2024-12-07 06:36:05,939 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=57.4 pTM=0.38 ipTM=0.391 tol=3.6
2024-12-07 06:36:21,338 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=58.2 pTM=0.384 ipTM=0.402 tol=2.89
2024-12-07 06:36:36,737 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=57.5 pTM=0.381 ipTM=0.396 tol=3.3
2024-12-07 06:36:52,136 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=57.3 pTM=0.379 ipTM=0.389 tol=2.66
2024-12-07 06:37:07,535 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=57.3 pTM=0.378 ipTM=0.389 tol=2.18
2024-12-07 06:37:22,933 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57.3 pTM=0.377 ipTM=0.384 tol=4.21
2024-12-07 06:37:38,332 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.3 pTM=0.374 ipTM=0.382 tol=4.01
2024-12-07 06:37:53,733 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.3 pTM=0.375 ipTM=0.386 tol=3.17
2024-12-07 06:38:09,125 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57.5 pTM=0.381 ipTM=0.397 tol=2.86
2024-12-07 06:38:24,515 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.2 pTM=0.376 ipTM=0.383 tol=2.38
2024-12-07 06:38:39,919 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.9 pTM=0.378 ipTM=0.391 tol=2.6
2024-12-07 06:38:55,307 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=57.5 pTM=0.378 ipTM=0.386 tol=2.79
2024-12-07 06:39:10,705 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=57.2 pTM=0.372 ipTM=0.381 tol=3.25
2024-12-07 06:39:26,086 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.4 pTM=0.378 ipTM=0.388 tol=4.38
2024-12-07 06:39:41,458 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=57.4 pTM=0.38 ipTM=0.391 tol=4.07
2024-12-07 06:39:56,844 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=57.2 pTM=0.374 ipTM=0.378 tol=3.4
2024-12-07 06:40:12,239 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.3 pTM=0.377 ipTM=0.386 tol=2.61
2024-12-07 06:40:27,621 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=57.1 pTM=0.375 ipTM=0.381 tol=3.99
2024-12-07 06:40:42,990 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=57.3 pTM=0.377 ipTM=0.387 tol=5.08
2024-12-07 06:40:58,357 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.1 pTM=0.376 ipTM=0.383 tol=3.86
2024-12-07 06:40:58,358 alphafold2_multimer_v3_model_3_seed_000 took 477.2s (30 recycles)
2024-12-07 06:41:14,239 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=51.2 pTM=0.31 ipTM=0.172
2024-12-07 06:41:29,593 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=50.1 pTM=0.379 ipTM=0.304 tol=17.4
2024-12-07 06:41:44,968 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=52.1 pTM=0.316 ipTM=0.168 tol=12.7
2024-12-07 06:42:00,339 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=52.5 pTM=0.303 ipTM=0.145 tol=11.7
2024-12-07 06:42:15,711 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=53 pTM=0.313 ipTM=0.143 tol=6.61
2024-12-07 06:42:31,123 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=53.5 pTM=0.311 ipTM=0.142 tol=6.09
2024-12-07 06:42:46,513 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=53.5 pTM=0.317 ipTM=0.145 tol=5.81
2024-12-07 06:43:01,886 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.9 pTM=0.314 ipTM=0.15 tol=5.66
2024-12-07 06:43:17,271 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=53.8 pTM=0.314 ipTM=0.144 tol=5.31
2024-12-07 06:43:32,664 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=53.1 pTM=0.309 ipTM=0.147 tol=4.2
2024-12-07 06:43:48,043 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=53.5 pTM=0.315 ipTM=0.148 tol=4.51
2024-12-07 06:44:03,416 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=53.1 pTM=0.311 ipTM=0.151 tol=4.45
2024-12-07 06:44:18,785 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=53.5 pTM=0.317 ipTM=0.146 tol=3.86
2024-12-07 06:44:34,191 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=53.3 pTM=0.316 ipTM=0.155 tol=5.46
2024-12-07 06:44:49,584 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=53.3 pTM=0.313 ipTM=0.143 tol=5.15
2024-12-07 06:45:04,957 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=53 pTM=0.313 ipTM=0.154 tol=4.94
2024-12-07 06:45:20,337 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=53.3 pTM=0.315 ipTM=0.142 tol=5.48
2024-12-07 06:45:35,721 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=53.1 pTM=0.311 ipTM=0.144 tol=4.28
2024-12-07 06:45:51,130 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=52.5 pTM=0.312 ipTM=0.142 tol=3.88
2024-12-07 06:46:06,526 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=53.4 pTM=0.319 ipTM=0.168 tol=8.55
2024-12-07 06:46:21,894 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=53.2 pTM=0.31 ipTM=0.138 tol=7.99
2024-12-07 06:46:37,279 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=53.8 pTM=0.311 ipTM=0.147 tol=6.44
2024-12-07 06:46:52,661 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=53.2 pTM=0.314 ipTM=0.142 tol=6.73
2024-12-07 06:47:08,052 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=53.5 pTM=0.312 ipTM=0.15 tol=6.36
2024-12-07 06:47:23,434 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=53.2 pTM=0.318 ipTM=0.15 tol=4.89
2024-12-07 06:47:38,804 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=53.8 pTM=0.319 ipTM=0.166 tol=4.62
2024-12-07 06:47:54,164 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=53.2 pTM=0.321 ipTM=0.149 tol=7.75
2024-12-07 06:48:09,531 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=52.9 pTM=0.311 ipTM=0.149 tol=6.56
2024-12-07 06:48:24,926 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=52.6 pTM=0.314 ipTM=0.146 tol=5.96
2024-12-07 06:48:40,306 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=52.4 pTM=0.307 ipTM=0.144 tol=5.05
2024-12-07 06:48:55,665 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=52.5 pTM=0.315 ipTM=0.147 tol=5.28
2024-12-07 06:48:55,666 alphafold2_multimer_v3_model_4_seed_000 took 476.8s (30 recycles)
2024-12-07 06:49:11,565 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=52.8 pTM=0.331 ipTM=0.213
2024-12-07 06:49:26,998 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=53.8 pTM=0.324 ipTM=0.155 tol=13.4
2024-12-07 06:49:42,403 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=55.2 pTM=0.324 ipTM=0.153 tol=8.21
2024-12-07 06:49:57,808 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=55.2 pTM=0.315 ipTM=0.128 tol=7.49
2024-12-07 06:50:13,193 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=55.7 pTM=0.333 ipTM=0.167 tol=9.48
2024-12-07 06:50:28,601 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=55.3 pTM=0.33 ipTM=0.182 tol=6.1
2024-12-07 06:50:44,000 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=55.9 pTM=0.323 ipTM=0.155 tol=5.84
2024-12-07 06:50:59,389 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=56.3 pTM=0.352 ipTM=0.275 tol=3.07
2024-12-07 06:51:14,785 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=58.2 pTM=0.384 ipTM=0.382 tol=3.36
2024-12-07 06:51:30,193 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=59.1 pTM=0.39 ipTM=0.402 tol=2.16
2024-12-07 06:51:45,585 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=58.9 pTM=0.394 ipTM=0.408 tol=4.79
2024-12-07 06:52:00,984 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=58.7 pTM=0.394 ipTM=0.411 tol=3.91
2024-12-07 06:52:16,380 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=58.8 pTM=0.396 ipTM=0.416 tol=2.45
2024-12-07 06:52:31,781 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=58.9 pTM=0.396 ipTM=0.415 tol=2.45
2024-12-07 06:52:47,175 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=58.4 pTM=0.398 ipTM=0.413 tol=4.58
2024-12-07 06:53:02,552 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=58.6 pTM=0.397 ipTM=0.409 tol=3.14
2024-12-07 06:53:17,917 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=58.5 pTM=0.398 ipTM=0.409 tol=3.92
2024-12-07 06:53:33,324 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=58.9 pTM=0.397 ipTM=0.414 tol=3.13
2024-12-07 06:53:48,737 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=58.2 pTM=0.399 ipTM=0.415 tol=4.64
2024-12-07 06:54:04,133 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=59 pTM=0.398 ipTM=0.421 tol=3.87
2024-12-07 06:54:19,503 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=59 pTM=0.398 ipTM=0.417 tol=2.19
2024-12-07 06:54:34,887 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=59.3 pTM=0.398 ipTM=0.421 tol=3.64
2024-12-07 06:54:50,290 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58.9 pTM=0.4 ipTM=0.419 tol=2.28
2024-12-07 06:55:05,678 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=59.2 pTM=0.397 ipTM=0.417 tol=2.73
2024-12-07 06:55:21,051 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=58.8 pTM=0.401 ipTM=0.422 tol=2.63
2024-12-07 06:55:36,425 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=58.8 pTM=0.399 ipTM=0.421 tol=2.81
2024-12-07 06:55:51,823 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58.7 pTM=0.397 ipTM=0.415 tol=2.28
2024-12-07 06:56:07,215 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=58.9 pTM=0.399 ipTM=0.423 tol=4.26
2024-12-07 06:56:22,596 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=58.4 pTM=0.397 ipTM=0.414 tol=2.05
2024-12-07 06:56:37,984 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=58.6 pTM=0.395 ipTM=0.412 tol=4.89
2024-12-07 06:56:53,367 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59 pTM=0.397 ipTM=0.419 tol=1.44
2024-12-07 06:56:53,367 alphafold2_multimer_v3_model_5_seed_000 took 477.2s (30 recycles)
2024-12-07 06:56:53,859 reranking models by 'multimer' metric
2024-12-07 06:56:57,066 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 06:57:56,110 Relaxation took 62.3s
2024-12-07 06:57:56,110 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=62.8 pTM=0.517 ipTM=0.567
2024-12-07 06:58:52,018 Relaxation took 55.9s
2024-12-07 06:58:52,019 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.1 pTM=0.506 ipTM=0.537
2024-12-07 07:00:12,514 Relaxation took 80.5s
2024-12-07 07:00:12,514 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59 pTM=0.397 ipTM=0.419
2024-12-07 07:01:36,745 Relaxation took 84.2s
2024-12-07 07:01:36,745 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.1 pTM=0.376 ipTM=0.383
2024-12-07 07:02:46,509 Relaxation took 69.8s
2024-12-07 07:02:46,509 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=52.5 pTM=0.315 ipTM=0.147
2024-12-07 07:02:48,504 Done