2024-12-07 06:13:44,193 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 06:13:44,515 Running on GPU
2024-12-07 06:13:48,051 Found 6 citations for tools or databases
2024-12-07 06:13:48,051 Query 1/1: MKRN2_GLTSCR2 (length 894)
2024-12-07 06:13:48,357 Sleeping for 5s. Reason: PENDING
2024-12-07 06:13:53,616 Sleeping for 6s. Reason: RUNNING
2024-12-07 06:13:59,875 Sleeping for 6s. Reason: RUNNING
2024-12-07 06:14:06,126 Sleeping for 9s. Reason: RUNNING
2024-12-07 06:14:15,381 Sleeping for 9s. Reason: RUNNING
2024-12-07 06:14:24,636 Sleeping for 6s. Reason: RUNNING
2024-12-07 06:14:30,905 Sleeping for 10s. Reason: RUNNING
2024-12-07 06:14:41,168 Sleeping for 9s. Reason: RUNNING
2024-12-07 06:14:50,425 Sleeping for 10s. Reason: RUNNING
2024-12-07 06:15:02,161 Sleeping for 5s. Reason: PENDING
2024-12-07 06:15:07,429 Sleeping for 6s. Reason: RUNNING
2024-12-07 06:15:13,685 Sleeping for 6s. Reason: RUNNING
2024-12-07 06:15:19,944 Sleeping for 5s. Reason: RUNNING
2024-12-07 06:15:25,198 Sleeping for 8s. Reason: RUNNING
2024-12-07 06:15:33,455 Sleeping for 5s. Reason: RUNNING
2024-12-07 06:15:38,708 Sleeping for 8s. Reason: RUNNING
2024-12-07 06:15:46,962 Sleeping for 5s. Reason: RUNNING
2024-12-07 06:15:52,222 Sleeping for 5s. Reason: RUNNING
2024-12-07 06:16:00,068 Setting max_seq=508, max_extra_seq=2048
2024-12-07 06:18:43,447 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=54.5 pTM=0.255 ipTM=0.114
2024-12-07 06:18:59,914 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=55.4 pTM=0.263 ipTM=0.116 tol=11
2024-12-07 06:19:16,400 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=55.4 pTM=0.264 ipTM=0.122 tol=9.09
2024-12-07 06:19:32,908 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=55.1 pTM=0.267 ipTM=0.125 tol=4.29
2024-12-07 06:19:49,456 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=55.6 pTM=0.266 ipTM=0.122 tol=3.85
2024-12-07 06:20:05,998 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=55.3 pTM=0.264 ipTM=0.124 tol=3.98
2024-12-07 06:20:22,566 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=55.2 pTM=0.264 ipTM=0.124 tol=3.78
2024-12-07 06:20:39,143 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=55.3 pTM=0.264 ipTM=0.122 tol=3.81
2024-12-07 06:20:55,745 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=55.6 pTM=0.265 ipTM=0.122 tol=3.74
2024-12-07 06:21:12,348 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=55.3 pTM=0.264 ipTM=0.125 tol=4.71
2024-12-07 06:21:28,967 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=55.5 pTM=0.262 ipTM=0.152 tol=5.58
2024-12-07 06:21:45,585 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=55.4 pTM=0.263 ipTM=0.132 tol=3.1
2024-12-07 06:22:02,208 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=55.4 pTM=0.261 ipTM=0.132 tol=2.54
2024-12-07 06:22:18,839 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=55.5 pTM=0.261 ipTM=0.152 tol=5.49
2024-12-07 06:22:35,524 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=55.2 pTM=0.262 ipTM=0.121 tol=8.39
2024-12-07 06:22:52,146 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=55.3 pTM=0.263 ipTM=0.124 tol=4.41
2024-12-07 06:23:08,757 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=55.4 pTM=0.264 ipTM=0.122 tol=3.24
2024-12-07 06:23:25,367 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=55.3 pTM=0.262 ipTM=0.121 tol=3.66
2024-12-07 06:23:41,983 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=55.6 pTM=0.263 ipTM=0.119 tol=3.68
2024-12-07 06:23:58,603 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=55.3 pTM=0.263 ipTM=0.119 tol=3.04
2024-12-07 06:24:15,225 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=55.3 pTM=0.265 ipTM=0.119 tol=2.33
2024-12-07 06:24:31,838 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=55.6 pTM=0.264 ipTM=0.12 tol=2.65
2024-12-07 06:24:48,455 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=55.6 pTM=0.266 ipTM=0.12 tol=2.4
2024-12-07 06:25:05,064 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=55.8 pTM=0.266 ipTM=0.12 tol=2.48
2024-12-07 06:25:21,709 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=55.6 pTM=0.265 ipTM=0.119 tol=2.98
2024-12-07 06:25:38,390 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=55.7 pTM=0.266 ipTM=0.119 tol=3.42
2024-12-07 06:25:55,055 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=55.6 pTM=0.265 ipTM=0.119 tol=3.13
2024-12-07 06:26:11,698 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=55.8 pTM=0.266 ipTM=0.117 tol=2.51
2024-12-07 06:26:28,347 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=56 pTM=0.267 ipTM=0.117 tol=2.42
2024-12-07 06:26:44,996 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=55.7 pTM=0.265 ipTM=0.118 tol=2.23
2024-12-07 06:27:01,665 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=55.6 pTM=0.264 ipTM=0.118 tol=2.74
2024-12-07 06:27:01,666 alphafold2_multimer_v3_model_1_seed_000 took 656.4s (30 recycles)
2024-12-07 06:27:18,809 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=52.8 pTM=0.265 ipTM=0.128
2024-12-07 06:27:35,464 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55.1 pTM=0.281 ipTM=0.14 tol=16.9
2024-12-07 06:27:52,096 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=56 pTM=0.302 ipTM=0.209 tol=9.51
2024-12-07 06:28:08,719 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=56.2 pTM=0.323 ipTM=0.244 tol=4.84
2024-12-07 06:28:25,341 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=56.5 pTM=0.324 ipTM=0.248 tol=3.38
2024-12-07 06:28:42,027 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=54.8 pTM=0.328 ipTM=0.265 tol=13.4
2024-12-07 06:28:58,674 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=56 pTM=0.325 ipTM=0.257 tol=14.6
2024-12-07 06:29:15,301 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=56.1 pTM=0.326 ipTM=0.261 tol=5.41
2024-12-07 06:29:31,918 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=56 pTM=0.324 ipTM=0.254 tol=2.65
2024-12-07 06:29:48,526 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=56.1 pTM=0.322 ipTM=0.257 tol=3.04
2024-12-07 06:30:05,149 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=56.1 pTM=0.317 ipTM=0.253 tol=3.1
2024-12-07 06:30:21,769 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=56.1 pTM=0.322 ipTM=0.258 tol=3.32
2024-12-07 06:30:38,367 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=55.5 pTM=0.32 ipTM=0.248 tol=10.7
2024-12-07 06:30:54,968 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=55.4 pTM=0.32 ipTM=0.25 tol=8.57
2024-12-07 06:31:11,569 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=55.4 pTM=0.323 ipTM=0.258 tol=8.16
2024-12-07 06:31:28,179 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=55.4 pTM=0.323 ipTM=0.256 tol=4.37
2024-12-07 06:31:44,810 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=55.6 pTM=0.321 ipTM=0.248 tol=3.51
2024-12-07 06:32:01,422 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=55.8 pTM=0.322 ipTM=0.259 tol=2.29
2024-12-07 06:32:18,029 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=55.8 pTM=0.323 ipTM=0.256 tol=2.99
2024-12-07 06:32:34,635 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=55.5 pTM=0.321 ipTM=0.259 tol=1.87
2024-12-07 06:32:51,251 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=55.4 pTM=0.315 ipTM=0.229 tol=2.27
2024-12-07 06:33:07,867 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=55.7 pTM=0.315 ipTM=0.233 tol=2.1
2024-12-07 06:33:24,471 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=55.6 pTM=0.317 ipTM=0.25 tol=3.12
2024-12-07 06:33:41,075 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=55.8 pTM=0.316 ipTM=0.244 tol=2.38
2024-12-07 06:33:57,682 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=55.7 pTM=0.316 ipTM=0.236 tol=1.93
2024-12-07 06:34:14,282 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=55.6 pTM=0.323 ipTM=0.243 tol=2.8
2024-12-07 06:34:30,890 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=55.9 pTM=0.328 ipTM=0.271 tol=2.66
2024-12-07 06:34:47,495 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=56 pTM=0.328 ipTM=0.264 tol=2.31
2024-12-07 06:35:04,104 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=56.3 pTM=0.324 ipTM=0.257 tol=3.26
2024-12-07 06:35:20,707 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=56.2 pTM=0.324 ipTM=0.261 tol=2.21
2024-12-07 06:35:37,314 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=56.3 pTM=0.323 ipTM=0.254 tol=2.77
2024-12-07 06:35:37,315 alphafold2_multimer_v3_model_2_seed_000 took 515.1s (30 recycles)
2024-12-07 06:35:54,582 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=51.6 pTM=0.256 ipTM=0.123
2024-12-07 06:36:11,276 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=52.8 pTM=0.278 ipTM=0.189 tol=14.3
2024-12-07 06:36:27,929 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=53.2 pTM=0.299 ipTM=0.218 tol=12
2024-12-07 06:36:44,583 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=53 pTM=0.297 ipTM=0.219 tol=7.71
2024-12-07 06:37:01,257 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=53.7 pTM=0.297 ipTM=0.222 tol=7.87
2024-12-07 06:37:17,930 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=54.2 pTM=0.304 ipTM=0.234 tol=6.5
2024-12-07 06:37:34,595 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.1 pTM=0.309 ipTM=0.248 tol=4.05
2024-12-07 06:37:51,269 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=53.7 pTM=0.294 ipTM=0.215 tol=4.74
2024-12-07 06:38:07,924 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=54.1 pTM=0.303 ipTM=0.233 tol=4.2
2024-12-07 06:38:24,590 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=54.2 pTM=0.302 ipTM=0.232 tol=1.96
2024-12-07 06:38:41,238 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=54.4 pTM=0.303 ipTM=0.234 tol=2.29
2024-12-07 06:38:57,884 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=54.3 pTM=0.309 ipTM=0.241 tol=4.39
2024-12-07 06:39:14,525 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=54 pTM=0.304 ipTM=0.235 tol=3.45
2024-12-07 06:39:31,179 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54 pTM=0.3 ipTM=0.232 tol=2.36
2024-12-07 06:39:47,817 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=53.7 pTM=0.299 ipTM=0.229 tol=2.76
2024-12-07 06:40:04,442 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=54.3 pTM=0.31 ipTM=0.241 tol=2.78
2024-12-07 06:40:21,068 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53.9 pTM=0.303 ipTM=0.231 tol=2.32
2024-12-07 06:40:37,695 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=54.2 pTM=0.31 ipTM=0.249 tol=3.05
2024-12-07 06:40:54,329 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=53.8 pTM=0.31 ipTM=0.246 tol=1.98
2024-12-07 06:41:10,949 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=54.8 pTM=0.325 ipTM=0.276 tol=1.85
2024-12-07 06:41:27,560 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=54.8 pTM=0.331 ipTM=0.28 tol=1.29
2024-12-07 06:41:44,165 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=55.4 pTM=0.338 ipTM=0.289 tol=2.04
2024-12-07 06:42:00,770 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=55.8 pTM=0.347 ipTM=0.306 tol=1.99
2024-12-07 06:42:17,366 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=56.2 pTM=0.356 ipTM=0.317 tol=1.82
2024-12-07 06:42:33,977 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=56.1 pTM=0.362 ipTM=0.323 tol=1.57
2024-12-07 06:42:50,590 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=56.2 pTM=0.361 ipTM=0.322 tol=1.61
2024-12-07 06:43:07,185 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=56.6 pTM=0.367 ipTM=0.334 tol=2.17
2024-12-07 06:43:23,802 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=56.8 pTM=0.369 ipTM=0.336 tol=2.73
2024-12-07 06:43:40,400 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=57.1 pTM=0.373 ipTM=0.336 tol=2.6
2024-12-07 06:43:57,010 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=57.2 pTM=0.377 ipTM=0.347 tol=2.21
2024-12-07 06:44:13,602 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.3 pTM=0.383 ipTM=0.355 tol=2
2024-12-07 06:44:13,602 alphafold2_multimer_v3_model_3_seed_000 took 515.8s (30 recycles)
2024-12-07 06:44:30,841 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=47 pTM=0.263 ipTM=0.122
2024-12-07 06:44:47,573 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=49.4 pTM=0.266 ipTM=0.146 tol=12.7
2024-12-07 06:45:04,294 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=50.2 pTM=0.266 ipTM=0.143 tol=10.4
2024-12-07 06:45:21,016 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=50.3 pTM=0.269 ipTM=0.157 tol=11.6
2024-12-07 06:45:37,721 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=50.6 pTM=0.273 ipTM=0.174 tol=7.68
2024-12-07 06:45:54,432 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=50.4 pTM=0.269 ipTM=0.167 tol=7.43
2024-12-07 06:46:11,139 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=50.5 pTM=0.262 ipTM=0.143 tol=8.48
2024-12-07 06:46:27,828 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=50.2 pTM=0.259 ipTM=0.141 tol=5.65
2024-12-07 06:46:44,535 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=50.1 pTM=0.257 ipTM=0.14 tol=3.99
2024-12-07 06:47:01,229 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=50.7 pTM=0.265 ipTM=0.154 tol=4.89
2024-12-07 06:47:17,910 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=51 pTM=0.267 ipTM=0.164 tol=6.95
2024-12-07 06:47:34,572 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=51.4 pTM=0.274 ipTM=0.193 tol=5.68
2024-12-07 06:47:51,254 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=50.4 pTM=0.267 ipTM=0.162 tol=8.38
2024-12-07 06:48:07,936 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=50.5 pTM=0.271 ipTM=0.173 tol=10.1
2024-12-07 06:48:24,641 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=49.6 pTM=0.263 ipTM=0.15 tol=5.15
2024-12-07 06:48:41,340 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=49.7 pTM=0.267 ipTM=0.158 tol=5.17
2024-12-07 06:48:58,031 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=50.1 pTM=0.266 ipTM=0.156 tol=4.85
2024-12-07 06:49:14,712 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=49.8 pTM=0.269 ipTM=0.186 tol=5.11
2024-12-07 06:49:31,402 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=49.6 pTM=0.264 ipTM=0.159 tol=4.02
2024-12-07 06:49:48,078 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=50 pTM=0.286 ipTM=0.24 tol=4.85
2024-12-07 06:50:04,763 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=50.1 pTM=0.266 ipTM=0.175 tol=3.38
2024-12-07 06:50:21,442 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=50.8 pTM=0.297 ipTM=0.271 tol=5
2024-12-07 06:50:38,120 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=50.5 pTM=0.266 ipTM=0.177 tol=3.94
2024-12-07 06:50:54,780 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=50.3 pTM=0.279 ipTM=0.201 tol=4.79
2024-12-07 06:51:11,461 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=50.8 pTM=0.27 ipTM=0.17 tol=4.2
2024-12-07 06:51:28,133 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=50.2 pTM=0.276 ipTM=0.194 tol=3.56
2024-12-07 06:51:44,812 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=50.6 pTM=0.267 ipTM=0.164 tol=3.72
2024-12-07 06:52:01,479 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=50.9 pTM=0.285 ipTM=0.222 tol=4.33
2024-12-07 06:52:18,165 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=51.1 pTM=0.268 ipTM=0.164 tol=3.72
2024-12-07 06:52:34,827 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=50.6 pTM=0.276 ipTM=0.19 tol=6.24
2024-12-07 06:52:51,505 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=50.8 pTM=0.269 ipTM=0.157 tol=5.29
2024-12-07 06:52:51,506 alphafold2_multimer_v3_model_4_seed_000 took 517.4s (30 recycles)
2024-12-07 06:53:08,772 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=48.4 pTM=0.267 ipTM=0.143
2024-12-07 06:53:25,479 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=51.6 pTM=0.307 ipTM=0.238 tol=17
2024-12-07 06:53:42,169 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=52.5 pTM=0.306 ipTM=0.228 tol=8.81
2024-12-07 06:53:58,839 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=52.7 pTM=0.308 ipTM=0.212 tol=4.41
2024-12-07 06:54:15,490 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=52.9 pTM=0.314 ipTM=0.228 tol=5.07
2024-12-07 06:54:32,151 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=53 pTM=0.317 ipTM=0.235 tol=4.25
2024-12-07 06:54:48,811 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=53.1 pTM=0.321 ipTM=0.247 tol=5.45
2024-12-07 06:55:05,455 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=53.2 pTM=0.32 ipTM=0.246 tol=4.26
2024-12-07 06:55:22,101 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53.3 pTM=0.328 ipTM=0.26 tol=4.13
2024-12-07 06:55:38,754 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=53.2 pTM=0.315 ipTM=0.24 tol=3.19
2024-12-07 06:55:55,418 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53.2 pTM=0.328 ipTM=0.266 tol=3.02
2024-12-07 06:56:12,068 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53.1 pTM=0.331 ipTM=0.273 tol=3.61
2024-12-07 06:56:28,720 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=53 pTM=0.329 ipTM=0.264 tol=3.39
2024-12-07 06:56:45,364 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=53.4 pTM=0.33 ipTM=0.265 tol=2.83
2024-12-07 06:57:01,995 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.2 pTM=0.327 ipTM=0.261 tol=2.62
2024-12-07 06:57:18,637 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53.3 pTM=0.332 ipTM=0.269 tol=3.06
2024-12-07 06:57:35,269 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53.6 pTM=0.338 ipTM=0.282 tol=2.24
2024-12-07 06:57:51,893 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=53.6 pTM=0.336 ipTM=0.277 tol=1.78
2024-12-07 06:58:08,529 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53.3 pTM=0.335 ipTM=0.271 tol=4.07
2024-12-07 06:58:25,164 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.6 pTM=0.344 ipTM=0.29 tol=4.68
2024-12-07 06:58:41,800 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.5 pTM=0.34 ipTM=0.286 tol=3.61
2024-12-07 06:58:58,448 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=53.1 pTM=0.339 ipTM=0.284 tol=2.42
2024-12-07 06:59:15,086 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=53.8 pTM=0.351 ipTM=0.3 tol=3.16
2024-12-07 06:59:31,722 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.9 pTM=0.352 ipTM=0.3 tol=1.31
2024-12-07 06:59:48,372 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53.6 pTM=0.343 ipTM=0.286 tol=2.98
2024-12-07 07:00:05,016 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53.6 pTM=0.342 ipTM=0.279 tol=2.53
2024-12-07 07:00:21,659 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.9 pTM=0.343 ipTM=0.279 tol=1.71
2024-12-07 07:00:38,289 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=54.3 pTM=0.353 ipTM=0.297 tol=2.78
2024-12-07 07:00:54,920 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=54.4 pTM=0.35 ipTM=0.295 tol=1.68
2024-12-07 07:01:11,539 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=54.4 pTM=0.355 ipTM=0.302 tol=2.58
2024-12-07 07:01:28,167 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=54.3 pTM=0.356 ipTM=0.302 tol=2.38
2024-12-07 07:01:28,168 alphafold2_multimer_v3_model_5_seed_000 took 516.2s (30 recycles)
2024-12-07 07:01:28,669 reranking models by 'multimer' metric
2024-12-07 07:01:31,600 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 07:03:09,597 Relaxation took 100.9s
2024-12-07 07:03:09,598 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.3 pTM=0.383 ipTM=0.355
2024-12-07 07:03:52,459 Relaxation took 42.9s
2024-12-07 07:03:52,459 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=54.3 pTM=0.356 ipTM=0.302
2024-12-07 07:04:56,051 Relaxation took 63.6s
2024-12-07 07:04:56,052 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=56.3 pTM=0.323 ipTM=0.254
2024-12-07 07:06:00,215 Relaxation took 64.2s
2024-12-07 07:06:00,215 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=50.8 pTM=0.269 ipTM=0.157
2024-12-07 07:07:17,415 Relaxation took 77.2s
2024-12-07 07:07:17,416 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=55.6 pTM=0.264 ipTM=0.118
2024-12-07 07:07:19,029 Done