2024-12-07 06:36:43,599 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 06:36:43,905 Running on GPU
2024-12-07 06:36:48,142 Found 6 citations for tools or databases
2024-12-07 06:36:48,142 Query 1/1: MKRN2_THRAP3 (length 1371)
2024-12-07 06:36:48,440 Sleeping for 8s. Reason: PENDING
2024-12-07 06:36:56,695 Sleeping for 9s. Reason: RUNNING
2024-12-07 06:37:05,961 Sleeping for 9s. Reason: RUNNING
2024-12-07 06:37:15,221 Sleeping for 8s. Reason: RUNNING
2024-12-07 06:37:23,487 Sleeping for 5s. Reason: RUNNING
2024-12-07 06:37:28,747 Sleeping for 8s. Reason: RUNNING
2024-12-07 06:37:37,007 Sleeping for 6s. Reason: RUNNING
2024-12-07 06:37:43,259 Sleeping for 9s. Reason: RUNNING
2024-12-07 06:37:52,517 Sleeping for 5s. Reason: RUNNING
2024-12-07 06:37:57,769 Sleeping for 6s. Reason: RUNNING
2024-12-07 06:38:04,030 Sleeping for 5s. Reason: RUNNING
2024-12-07 06:38:09,291 Sleeping for 8s. Reason: RUNNING
2024-12-07 06:38:17,548 Sleeping for 6s. Reason: RUNNING
2024-12-07 06:38:23,805 Sleeping for 8s. Reason: RUNNING
2024-12-07 06:38:32,860 Sleeping for 10s. Reason: PENDING
2024-12-07 06:38:43,117 Sleeping for 9s. Reason: RUNNING
2024-12-07 06:38:52,383 Sleeping for 9s. Reason: RUNNING
2024-12-07 06:39:01,642 Sleeping for 10s. Reason: RUNNING
2024-12-07 06:39:11,903 Sleeping for 9s. Reason: RUNNING
2024-12-07 06:39:21,163 Sleeping for 7s. Reason: RUNNING
2024-12-07 06:39:28,417 Sleeping for 6s. Reason: RUNNING
2024-12-07 06:39:37,242 Setting max_seq=508, max_extra_seq=2048
2024-12-07 06:43:06,069 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=28.5 pTM=0.255 ipTM=0.207
2024-12-07 06:43:56,800 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=29.1 pTM=0.254 ipTM=0.196 tol=17.4
2024-12-07 06:44:47,701 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=29.4 pTM=0.254 ipTM=0.205 tol=9.08
2024-12-07 06:45:38,712 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=29.3 pTM=0.254 ipTM=0.237 tol=10.8
2024-12-07 06:46:29,776 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=29.4 pTM=0.257 ipTM=0.33 tol=5.62
2024-12-07 06:47:20,858 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=29.3 pTM=0.257 ipTM=0.331 tol=6.36
2024-12-07 06:48:11,936 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=29.2 pTM=0.257 ipTM=0.307 tol=6.16
2024-12-07 06:49:03,018 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=29.2 pTM=0.257 ipTM=0.312 tol=5.1
2024-12-07 06:49:54,102 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=29.4 pTM=0.26 ipTM=0.337 tol=6.05
2024-12-07 06:50:45,165 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=29.2 pTM=0.257 ipTM=0.287 tol=6.14
2024-12-07 06:51:36,249 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=29.4 pTM=0.258 ipTM=0.298 tol=6.08
2024-12-07 06:52:27,344 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=29.6 pTM=0.26 ipTM=0.331 tol=5.38
2024-12-07 06:53:18,419 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=29.4 pTM=0.259 ipTM=0.322 tol=4.34
2024-12-07 06:54:09,529 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=29.6 pTM=0.259 ipTM=0.325 tol=4.08
2024-12-07 06:55:00,640 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=29.5 pTM=0.258 ipTM=0.298 tol=4.33
2024-12-07 06:55:51,752 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=29.5 pTM=0.26 ipTM=0.323 tol=3.45
2024-12-07 06:56:42,858 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=29.6 pTM=0.26 ipTM=0.338 tol=3.4
2024-12-07 06:57:33,950 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=29.4 pTM=0.257 ipTM=0.3 tol=3.76
2024-12-07 06:58:25,013 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=29.5 pTM=0.258 ipTM=0.306 tol=3.31
2024-12-07 06:59:16,082 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=29.7 pTM=0.261 ipTM=0.347 tol=3.06
2024-12-07 07:00:07,181 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=29.6 pTM=0.264 ipTM=0.35 tol=3.67
2024-12-07 07:00:58,306 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=29.8 pTM=0.268 ipTM=0.354 tol=4.69
2024-12-07 07:01:49,406 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=30.1 pTM=0.271 ipTM=0.379 tol=4.07
2024-12-07 07:02:40,486 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=29.9 pTM=0.273 ipTM=0.354 tol=4.16
2024-12-07 07:03:31,590 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=29.8 pTM=0.27 ipTM=0.343 tol=3.25
2024-12-07 07:04:22,697 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=29.8 pTM=0.27 ipTM=0.367 tol=3.36
2024-12-07 07:05:13,786 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=29.5 pTM=0.27 ipTM=0.331 tol=3.89
2024-12-07 07:06:04,871 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=29.6 pTM=0.27 ipTM=0.37 tol=3.24
2024-12-07 07:06:55,929 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=29.7 pTM=0.272 ipTM=0.349 tol=3.09
2024-12-07 07:07:46,977 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=29.4 pTM=0.269 ipTM=0.345 tol=3.03
2024-12-07 07:08:38,035 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=29.6 pTM=0.27 ipTM=0.358 tol=3.45
2024-12-07 07:08:38,036 alphafold2_multimer_v3_model_1_seed_000 took 1735.7s (30 recycles)
2024-12-07 07:09:30,167 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=29.3 pTM=0.265 ipTM=0.174
2024-12-07 07:10:21,338 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=30.3 pTM=0.261 ipTM=0.16 tol=18.8
2024-12-07 07:11:12,551 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=30.5 pTM=0.264 ipTM=0.173 tol=16.9
2024-12-07 07:12:03,793 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=30.4 pTM=0.262 ipTM=0.165 tol=13
2024-12-07 07:12:55,002 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=30.8 pTM=0.261 ipTM=0.164 tol=12.4
2024-12-07 07:13:46,217 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=30.5 pTM=0.262 ipTM=0.176 tol=10.5
2024-12-07 07:14:37,464 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=30.5 pTM=0.262 ipTM=0.171 tol=8.35
2024-12-07 07:15:28,719 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=30.5 pTM=0.264 ipTM=0.185 tol=6.17
2024-12-07 07:16:19,979 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=30.7 pTM=0.266 ipTM=0.199 tol=4.63
2024-12-07 07:17:11,243 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=30.7 pTM=0.265 ipTM=0.201 tol=5.06
2024-12-07 07:18:02,515 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=30.8 pTM=0.266 ipTM=0.21 tol=4.49
2024-12-07 07:18:53,774 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=30.8 pTM=0.268 ipTM=0.214 tol=3.48
2024-12-07 07:19:45,028 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=30.7 pTM=0.268 ipTM=0.216 tol=3.84
2024-12-07 07:20:36,257 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=30.8 pTM=0.268 ipTM=0.212 tol=3.84
2024-12-07 07:21:27,493 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=30.8 pTM=0.267 ipTM=0.199 tol=3.32
2024-12-07 07:22:18,728 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=30.8 pTM=0.268 ipTM=0.207 tol=3.74
2024-12-07 07:23:09,972 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=30.9 pTM=0.267 ipTM=0.207 tol=3.52
2024-12-07 07:24:01,231 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=30.8 pTM=0.268 ipTM=0.202 tol=3.86
2024-12-07 07:24:52,513 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=30.9 pTM=0.268 ipTM=0.207 tol=4.52
2024-12-07 07:25:43,778 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=30.9 pTM=0.27 ipTM=0.215 tol=8.89
2024-12-07 07:26:35,048 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=31 pTM=0.269 ipTM=0.203 tol=9.55
2024-12-07 07:27:26,331 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=30.9 pTM=0.269 ipTM=0.208 tol=9.29
2024-12-07 07:28:17,595 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=31.1 pTM=0.268 ipTM=0.189 tol=4.91
2024-12-07 07:29:08,872 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=30.9 pTM=0.269 ipTM=0.187 tol=4.91
2024-12-07 07:30:00,075 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=31 pTM=0.27 ipTM=0.212 tol=4.38
2024-12-07 07:30:51,249 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=30.9 pTM=0.27 ipTM=0.211 tol=4.29
2024-12-07 07:31:42,415 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=31.1 pTM=0.27 ipTM=0.207 tol=3.91
2024-12-07 07:32:33,605 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=30.1 pTM=0.269 ipTM=0.196 tol=24.4
2024-12-07 07:33:24,837 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=31 pTM=0.267 ipTM=0.177 tol=24.1
2024-12-07 07:34:16,072 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=31 pTM=0.267 ipTM=0.189 tol=10.1
2024-12-07 07:35:07,275 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=30.9 pTM=0.269 ipTM=0.213 tol=6.9
2024-12-07 07:35:07,276 alphafold2_multimer_v3_model_2_seed_000 took 1588.1s (30 recycles)
2024-12-07 07:35:59,852 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=29.2 pTM=0.259 ipTM=0.186
2024-12-07 07:36:51,396 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=28.4 pTM=0.257 ipTM=0.219 tol=20
2024-12-07 07:37:42,932 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=28.6 pTM=0.259 ipTM=0.182 tol=12.1
2024-12-07 07:38:34,505 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=28.7 pTM=0.26 ipTM=0.189 tol=15.8
2024-12-07 07:39:26,082 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=28.9 pTM=0.26 ipTM=0.184 tol=13.8
2024-12-07 07:40:17,674 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=29 pTM=0.261 ipTM=0.21 tol=11.7
2024-12-07 07:41:09,297 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=28.9 pTM=0.26 ipTM=0.194 tol=13.4
2024-12-07 07:42:00,980 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=28.9 pTM=0.261 ipTM=0.186 tol=13.5
2024-12-07 07:42:52,699 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=29.2 pTM=0.265 ipTM=0.22 tol=8.89
2024-12-07 07:43:44,407 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=29 pTM=0.263 ipTM=0.188 tol=13.7
2024-12-07 07:44:36,118 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=29.2 pTM=0.265 ipTM=0.227 tol=8.91
2024-12-07 07:45:27,811 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=29.2 pTM=0.265 ipTM=0.189 tol=12
2024-12-07 07:46:19,497 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=29.1 pTM=0.263 ipTM=0.204 tol=11
2024-12-07 07:47:11,196 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=29.3 pTM=0.266 ipTM=0.191 tol=6.97
2024-12-07 07:48:02,868 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=29.4 pTM=0.267 ipTM=0.229 tol=6.91
2024-12-07 07:48:54,593 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=29.5 pTM=0.266 ipTM=0.187 tol=12.5
2024-12-07 07:49:46,342 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=29.3 pTM=0.263 ipTM=0.208 tol=12.5
2024-12-07 07:50:38,066 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=29.4 pTM=0.265 ipTM=0.185 tol=7.9
2024-12-07 07:51:29,795 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=29.5 pTM=0.265 ipTM=0.214 tol=10.2
2024-12-07 07:52:21,494 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=29.4 pTM=0.265 ipTM=0.191 tol=5.79
2024-12-07 07:53:13,168 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=29.2 pTM=0.263 ipTM=0.198 tol=10.5
2024-12-07 07:54:04,862 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=29.2 pTM=0.263 ipTM=0.186 tol=10.1
2024-12-07 07:54:56,552 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=29.3 pTM=0.264 ipTM=0.21 tol=4.43
2024-12-07 07:55:48,256 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=29.2 pTM=0.265 ipTM=0.19 tol=4.86
2024-12-07 07:56:39,991 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=29.3 pTM=0.266 ipTM=0.232 tol=5.52
2024-12-07 07:57:31,759 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=29.3 pTM=0.263 ipTM=0.185 tol=6.17
2024-12-07 07:58:23,513 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=29.3 pTM=0.264 ipTM=0.215 tol=5.4
2024-12-07 07:59:15,254 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=29.4 pTM=0.263 ipTM=0.191 tol=5.83
2024-12-07 08:00:06,996 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=29.3 pTM=0.266 ipTM=0.22 tol=12.5
2024-12-07 08:00:58,767 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=29.2 pTM=0.264 ipTM=0.187 tol=7.53
2024-12-07 08:01:50,482 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=29.3 pTM=0.265 ipTM=0.218 tol=10.5
2024-12-07 08:01:50,483 alphafold2_multimer_v3_model_3_seed_000 took 1602.1s (30 recycles)
2024-12-07 08:02:43,005 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=28.5 pTM=0.264 ipTM=0.217
2024-12-07 08:03:34,602 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=28.3 pTM=0.258 ipTM=0.184 tol=24.3
2024-12-07 08:04:26,204 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=28.7 pTM=0.26 ipTM=0.194 tol=15.5
2024-12-07 08:05:17,873 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=28.5 pTM=0.26 ipTM=0.21 tol=14
2024-12-07 08:06:09,534 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=29.1 pTM=0.267 ipTM=0.208 tol=14.7
2024-12-07 08:07:01,193 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=29 pTM=0.263 ipTM=0.214 tol=11.2
2024-12-07 08:07:52,858 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=29.2 pTM=0.267 ipTM=0.203 tol=14.6
2024-12-07 08:08:44,537 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=29 pTM=0.264 ipTM=0.203 tol=13.6
2024-12-07 08:09:36,214 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=29 pTM=0.262 ipTM=0.196 tol=14.9
2024-12-07 08:10:27,872 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=29.2 pTM=0.264 ipTM=0.198 tol=12.7
2024-12-07 08:11:19,529 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=29.4 pTM=0.264 ipTM=0.207 tol=9.62
2024-12-07 08:12:11,172 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=29.7 pTM=0.268 ipTM=0.219 tol=13.2
2024-12-07 08:13:02,808 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=29.3 pTM=0.264 ipTM=0.216 tol=8.55
2024-12-07 08:13:54,429 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=29.4 pTM=0.266 ipTM=0.203 tol=9.85
2024-12-07 08:14:46,091 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=29.1 pTM=0.263 ipTM=0.198 tol=12.9
2024-12-07 08:15:37,739 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=29.5 pTM=0.266 ipTM=0.206 tol=11.5
2024-12-07 08:16:29,339 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=29.5 pTM=0.263 ipTM=0.199 tol=13.1
2024-12-07 08:17:20,968 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=29.3 pTM=0.266 ipTM=0.201 tol=15
2024-12-07 08:18:12,545 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=29.5 pTM=0.267 ipTM=0.201 tol=14.4
2024-12-07 08:19:04,163 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=29.4 pTM=0.269 ipTM=0.208 tol=14.8
2024-12-07 08:19:55,788 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=29.2 pTM=0.267 ipTM=0.202 tol=7.45
2024-12-07 08:20:47,426 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=29.4 pTM=0.268 ipTM=0.209 tol=8.77
2024-12-07 08:21:39,090 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=29.4 pTM=0.266 ipTM=0.202 tol=14.7
2024-12-07 08:22:30,717 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=29.5 pTM=0.269 ipTM=0.209 tol=14.9
2024-12-07 08:23:22,345 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=29.3 pTM=0.265 ipTM=0.2 tol=7.59
2024-12-07 08:24:13,968 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=29.5 pTM=0.268 ipTM=0.2 tol=6.29
2024-12-07 08:25:05,596 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=29.4 pTM=0.265 ipTM=0.201 tol=5.19
2024-12-07 08:25:57,180 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=29.6 pTM=0.269 ipTM=0.199 tol=6.65
2024-12-07 08:26:48,763 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=29.5 pTM=0.267 ipTM=0.205 tol=14.4
2024-12-07 08:27:40,336 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=29.3 pTM=0.269 ipTM=0.201 tol=14.3
2024-12-07 08:28:31,953 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=29.3 pTM=0.267 ipTM=0.209 tol=15.4
2024-12-07 08:28:31,954 alphafold2_multimer_v3_model_4_seed_000 took 1600.3s (30 recycles)
2024-12-07 08:29:24,754 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=28.5 pTM=0.26 ipTM=0.289
2024-12-07 08:30:16,555 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=29.5 pTM=0.264 ipTM=0.383 tol=20.8
2024-12-07 08:31:08,391 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=29.3 pTM=0.26 ipTM=0.283 tol=9.2
2024-12-07 08:32:00,251 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=29.5 pTM=0.261 ipTM=0.312 tol=6.98
2024-12-07 08:32:52,108 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=29.7 pTM=0.26 ipTM=0.301 tol=13.8
2024-12-07 08:33:43,985 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=29.7 pTM=0.26 ipTM=0.299 tol=7.65
2024-12-07 08:34:35,852 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=29.8 pTM=0.26 ipTM=0.289 tol=11.7
2024-12-07 08:35:27,695 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=29.6 pTM=0.261 ipTM=0.303 tol=7.78
2024-12-07 08:36:19,549 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=29.7 pTM=0.26 ipTM=0.281 tol=13.2
2024-12-07 08:37:11,357 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=29.6 pTM=0.261 ipTM=0.296 tol=10.9
2024-12-07 08:38:03,132 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=29.8 pTM=0.261 ipTM=0.292 tol=12.8
2024-12-07 08:38:54,862 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=29.9 pTM=0.262 ipTM=0.305 tol=12.3
2024-12-07 08:39:46,631 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=29.9 pTM=0.26 ipTM=0.292 tol=8.84
2024-12-07 08:40:38,393 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=30.1 pTM=0.263 ipTM=0.325 tol=13.6
2024-12-07 08:41:30,203 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=30.3 pTM=0.262 ipTM=0.304 tol=14.1
2024-12-07 08:42:22,009 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=30.1 pTM=0.262 ipTM=0.313 tol=9.07
2024-12-07 08:43:13,835 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=30.3 pTM=0.262 ipTM=0.319 tol=4.89
2024-12-07 08:44:05,627 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=30.3 pTM=0.262 ipTM=0.316 tol=15.5
2024-12-07 08:44:57,394 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=30.4 pTM=0.262 ipTM=0.315 tol=15.1
2024-12-07 08:45:49,120 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=30.3 pTM=0.262 ipTM=0.312 tol=7.78
2024-12-07 08:46:40,867 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=30.2 pTM=0.262 ipTM=0.31 tol=11.2
2024-12-07 08:47:32,640 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=30.1 pTM=0.261 ipTM=0.301 tol=12.8
2024-12-07 08:48:24,417 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=30.3 pTM=0.261 ipTM=0.298 tol=13.4
2024-12-07 08:49:16,213 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=30.2 pTM=0.263 ipTM=0.327 tol=8.01
2024-12-07 08:50:08,014 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=30.1 pTM=0.262 ipTM=0.301 tol=14
2024-12-07 08:50:59,783 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=30.2 pTM=0.26 ipTM=0.311 tol=6.61
2024-12-07 08:51:51,562 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=30.2 pTM=0.261 ipTM=0.298 tol=5.25
2024-12-07 08:52:43,386 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=30.3 pTM=0.261 ipTM=0.302 tol=12.6
2024-12-07 08:53:35,214 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=30.1 pTM=0.261 ipTM=0.313 tol=7.67
2024-12-07 08:54:27,040 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=30.1 pTM=0.261 ipTM=0.303 tol=13.8
2024-12-07 08:55:18,862 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=30.1 pTM=0.261 ipTM=0.294 tol=6
2024-12-07 08:55:18,863 alphafold2_multimer_v3_model_5_seed_000 took 1605.8s (30 recycles)
2024-12-07 08:55:19,997 reranking models by 'multimer' metric
2024-12-07 08:55:21,411 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 08:58:14,206 Relaxation took 174.2s
2024-12-07 08:58:14,206 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=29.6 pTM=0.27 ipTM=0.358
2024-12-07 09:01:07,905 Relaxation took 173.7s
2024-12-07 09:01:07,905 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=30.1 pTM=0.261 ipTM=0.294
2024-12-07 09:04:17,650 Relaxation took 189.7s
2024-12-07 09:04:17,650 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=29.3 pTM=0.265 ipTM=0.218
2024-12-07 09:07:19,712 Relaxation took 182.1s
2024-12-07 09:07:19,712 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=30.9 pTM=0.269 ipTM=0.213
2024-12-07 09:11:15,564 Relaxation took 235.8s
2024-12-07 09:11:15,564 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=29.3 pTM=0.267 ipTM=0.209
2024-12-07 09:11:18,449 Done