2024-12-07 07:03:26,838 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 07:03:27,263 Running on GPU
2024-12-07 07:03:30,773 Found 6 citations for tools or databases
2024-12-07 07:03:30,773 Query 1/1: MNAT1_CCNB1 (length 742)
2024-12-07 07:03:31,062 Sleeping for 10s. Reason: PENDING
2024-12-07 07:03:41,318 Sleeping for 6s. Reason: RUNNING
2024-12-07 07:03:47,579 Sleeping for 7s. Reason: RUNNING
2024-12-07 07:03:54,842 Sleeping for 5s. Reason: RUNNING
2024-12-07 07:04:00,102 Sleeping for 7s. Reason: RUNNING
2024-12-07 07:04:07,358 Sleeping for 10s. Reason: RUNNING
2024-12-07 07:04:17,617 Sleeping for 6s. Reason: RUNNING
2024-12-07 07:04:23,885 Sleeping for 9s. Reason: RUNNING
2024-12-07 07:04:33,146 Sleeping for 10s. Reason: RUNNING
2024-12-07 07:04:43,411 Sleeping for 9s. Reason: RUNNING
2024-12-07 07:04:54,385 Sleeping for 5s. Reason: PENDING
2024-12-07 07:04:59,640 Sleeping for 10s. Reason: RUNNING
2024-12-07 07:05:09,900 Sleeping for 7s. Reason: RUNNING
2024-12-07 07:05:17,157 Sleeping for 9s. Reason: RUNNING
2024-12-07 07:05:26,413 Sleeping for 10s. Reason: RUNNING
2024-12-07 07:05:36,686 Sleeping for 7s. Reason: RUNNING
2024-12-07 07:05:47,340 Setting max_seq=508, max_extra_seq=2048
2024-12-07 07:09:03,485 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=63.5 pTM=0.448 ipTM=0.164
2024-12-07 07:09:17,786 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.3 pTM=0.466 ipTM=0.461 tol=13.6
2024-12-07 07:09:32,079 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.6 pTM=0.458 ipTM=0.346 tol=7.57
2024-12-07 07:09:46,380 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=67.1 pTM=0.456 ipTM=0.392 tol=4.44
2024-12-07 07:10:00,684 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67.5 pTM=0.454 ipTM=0.362 tol=1.97
2024-12-07 07:10:14,995 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=67.2 pTM=0.455 ipTM=0.379 tol=2.24
2024-12-07 07:10:29,301 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=67.5 pTM=0.456 ipTM=0.398 tol=2.71
2024-12-07 07:10:43,616 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67.3 pTM=0.453 ipTM=0.377 tol=3.95
2024-12-07 07:10:57,939 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67.8 pTM=0.453 ipTM=0.388 tol=2.59
2024-12-07 07:11:12,270 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67.8 pTM=0.451 ipTM=0.377 tol=1.61
2024-12-07 07:11:26,599 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=68 pTM=0.452 ipTM=0.382 tol=2.22
2024-12-07 07:11:40,929 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.8 pTM=0.452 ipTM=0.364 tol=1.3
2024-12-07 07:11:55,257 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.8 pTM=0.453 ipTM=0.39 tol=1.38
2024-12-07 07:12:09,591 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=68.2 pTM=0.451 ipTM=0.37 tol=2.04
2024-12-07 07:12:23,925 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=68.2 pTM=0.452 ipTM=0.383 tol=1.7
2024-12-07 07:12:38,264 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.9 pTM=0.451 ipTM=0.365 tol=2.34
2024-12-07 07:12:52,588 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=68.1 pTM=0.453 ipTM=0.39 tol=1.85
2024-12-07 07:13:06,931 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.9 pTM=0.452 ipTM=0.378 tol=1.6
2024-12-07 07:13:21,268 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=68 pTM=0.452 ipTM=0.373 tol=2.52
2024-12-07 07:13:35,609 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.9 pTM=0.452 ipTM=0.372 tol=2
2024-12-07 07:13:49,942 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.9 pTM=0.452 ipTM=0.364 tol=2.08
2024-12-07 07:14:04,288 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=67.8 pTM=0.451 ipTM=0.376 tol=2.26
2024-12-07 07:14:18,629 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=67.8 pTM=0.451 ipTM=0.366 tol=1.84
2024-12-07 07:14:32,977 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=68.1 pTM=0.451 ipTM=0.38 tol=1.82
2024-12-07 07:14:47,318 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67.7 pTM=0.45 ipTM=0.362 tol=1.84
2024-12-07 07:15:01,661 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=67.8 pTM=0.449 ipTM=0.37 tol=1.62
2024-12-07 07:15:16,001 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67.9 pTM=0.451 ipTM=0.36 tol=1.76
2024-12-07 07:15:30,354 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.6 pTM=0.451 ipTM=0.389 tol=7.08
2024-12-07 07:15:44,695 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67.4 pTM=0.45 ipTM=0.332 tol=5.63
2024-12-07 07:15:59,044 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=67.8 pTM=0.451 ipTM=0.388 tol=3.03
2024-12-07 07:16:13,388 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.7 pTM=0.449 ipTM=0.372 tol=2.28
2024-12-07 07:16:13,389 alphafold2_multimer_v3_model_1_seed_000 took 619.6s (30 recycles)
2024-12-07 07:16:28,203 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=66.4 pTM=0.457 ipTM=0.427
2024-12-07 07:16:42,552 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66.9 pTM=0.457 ipTM=0.355 tol=6.21
2024-12-07 07:16:56,917 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=67.6 pTM=0.453 ipTM=0.324 tol=5.04
2024-12-07 07:17:11,273 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67.9 pTM=0.452 ipTM=0.302 tol=3.54
2024-12-07 07:17:25,633 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=68.7 pTM=0.451 ipTM=0.311 tol=2.28
2024-12-07 07:17:39,985 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=68.4 pTM=0.451 ipTM=0.32 tol=1.57
2024-12-07 07:17:54,340 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.7 pTM=0.452 ipTM=0.326 tol=1.36
2024-12-07 07:18:08,695 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.9 pTM=0.453 ipTM=0.341 tol=1.79
2024-12-07 07:18:23,050 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.9 pTM=0.45 ipTM=0.329 tol=1.13
2024-12-07 07:18:37,399 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=69.1 pTM=0.452 ipTM=0.337 tol=1.51
2024-12-07 07:18:51,746 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=69.2 pTM=0.45 ipTM=0.316 tol=1.27
2024-12-07 07:19:06,091 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=69 pTM=0.451 ipTM=0.325 tol=1.52
2024-12-07 07:19:20,436 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=69 pTM=0.451 ipTM=0.324 tol=0.951
2024-12-07 07:19:34,775 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=69.4 pTM=0.453 ipTM=0.313 tol=1.25
2024-12-07 07:19:49,124 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=69.2 pTM=0.452 ipTM=0.331 tol=1.13
2024-12-07 07:20:03,473 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=69.2 pTM=0.453 ipTM=0.32 tol=1.74
2024-12-07 07:20:17,819 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=69 pTM=0.454 ipTM=0.331 tol=1.59
2024-12-07 07:20:32,164 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=69.2 pTM=0.454 ipTM=0.332 tol=1.5
2024-12-07 07:20:46,515 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=69.4 pTM=0.453 ipTM=0.328 tol=1.15
2024-12-07 07:21:00,862 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=69.2 pTM=0.454 ipTM=0.33 tol=0.931
2024-12-07 07:21:15,212 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=69.2 pTM=0.453 ipTM=0.315 tol=0.956
2024-12-07 07:21:29,562 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=69.3 pTM=0.452 ipTM=0.318 tol=1.44
2024-12-07 07:21:43,914 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=68.9 pTM=0.452 ipTM=0.315 tol=1.77
2024-12-07 07:21:58,259 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=69.2 pTM=0.452 ipTM=0.32 tol=0.863
2024-12-07 07:22:12,606 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=69.2 pTM=0.452 ipTM=0.323 tol=1.11
2024-12-07 07:22:26,946 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=69.1 pTM=0.451 ipTM=0.323 tol=1.58
2024-12-07 07:22:41,290 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=69.2 pTM=0.451 ipTM=0.298 tol=0.847
2024-12-07 07:22:55,633 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=69.2 pTM=0.453 ipTM=0.322 tol=1.43
2024-12-07 07:23:09,973 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=69.1 pTM=0.451 ipTM=0.302 tol=1.87
2024-12-07 07:23:24,313 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=69.2 pTM=0.452 ipTM=0.324 tol=1.61
2024-12-07 07:23:38,660 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=69.2 pTM=0.451 ipTM=0.334 tol=1.05
2024-12-07 07:23:38,660 alphafold2_multimer_v3_model_2_seed_000 took 444.8s (30 recycles)
2024-12-07 07:23:53,483 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=65.6 pTM=0.457 ipTM=0.467
2024-12-07 07:24:07,858 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.8 pTM=0.448 ipTM=0.254 tol=6.7
2024-12-07 07:24:22,220 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=68 pTM=0.453 ipTM=0.298 tol=6.38
2024-12-07 07:24:36,596 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=68.1 pTM=0.448 ipTM=0.276 tol=5.18
2024-12-07 07:24:50,965 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=68.9 pTM=0.453 ipTM=0.344 tol=3.48
2024-12-07 07:25:05,328 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=68.6 pTM=0.45 ipTM=0.242 tol=2.17
2024-12-07 07:25:19,693 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=69.1 pTM=0.453 ipTM=0.364 tol=2.5
2024-12-07 07:25:34,058 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=68.9 pTM=0.448 ipTM=0.24 tol=2.11
2024-12-07 07:25:48,419 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=69.3 pTM=0.454 ipTM=0.341 tol=1.71
2024-12-07 07:26:02,783 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=69 pTM=0.448 ipTM=0.251 tol=2.19
2024-12-07 07:26:17,147 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=69.3 pTM=0.453 ipTM=0.346 tol=2.36
2024-12-07 07:26:31,496 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=69.1 pTM=0.45 ipTM=0.253 tol=1.93
2024-12-07 07:26:45,851 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=69.2 pTM=0.456 ipTM=0.333 tol=3.51
2024-12-07 07:27:00,207 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=69.3 pTM=0.452 ipTM=0.212 tol=2.7
2024-12-07 07:27:14,566 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=69.5 pTM=0.454 ipTM=0.279 tol=1.68
2024-12-07 07:27:28,936 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=69.1 pTM=0.45 ipTM=0.264 tol=2.11
2024-12-07 07:27:43,292 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=69.3 pTM=0.453 ipTM=0.335 tol=1.87
2024-12-07 07:27:57,645 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=69.2 pTM=0.45 ipTM=0.229 tol=2.39
2024-12-07 07:28:12,008 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=69.2 pTM=0.456 ipTM=0.273 tol=2.49
2024-12-07 07:28:26,362 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=69.1 pTM=0.457 ipTM=0.202 tol=3.03
2024-12-07 07:28:40,720 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=69.1 pTM=0.457 ipTM=0.272 tol=1.46
2024-12-07 07:28:55,080 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=69 pTM=0.455 ipTM=0.222 tol=1.62
2024-12-07 07:29:09,432 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=68.8 pTM=0.455 ipTM=0.218 tol=1.66
2024-12-07 07:29:23,791 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=68.9 pTM=0.456 ipTM=0.288 tol=1.53
2024-12-07 07:29:38,129 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=69.1 pTM=0.456 ipTM=0.21 tol=1.62
2024-12-07 07:29:52,478 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=68.9 pTM=0.453 ipTM=0.272 tol=1.04
2024-12-07 07:30:06,829 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=69.1 pTM=0.455 ipTM=0.215 tol=1.11
2024-12-07 07:30:21,178 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=69.2 pTM=0.452 ipTM=0.195 tol=1.33
2024-12-07 07:30:35,527 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=69.1 pTM=0.456 ipTM=0.273 tol=2.04
2024-12-07 07:30:49,872 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=69 pTM=0.455 ipTM=0.22 tol=1.37
2024-12-07 07:31:04,225 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=69.1 pTM=0.457 ipTM=0.281 tol=1.58
2024-12-07 07:31:04,226 alphafold2_multimer_v3_model_3_seed_000 took 445.1s (30 recycles)
2024-12-07 07:31:19,017 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=62.2 pTM=0.453 ipTM=0.372
2024-12-07 07:31:33,382 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=63.8 pTM=0.455 ipTM=0.423 tol=7.04
2024-12-07 07:31:47,761 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.6 pTM=0.446 ipTM=0.38 tol=5.71
2024-12-07 07:32:02,145 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=66 pTM=0.446 ipTM=0.383 tol=7.61
2024-12-07 07:32:16,540 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=67.2 pTM=0.442 ipTM=0.34 tol=4.89
2024-12-07 07:32:30,925 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=67.6 pTM=0.442 ipTM=0.336 tol=3.48
2024-12-07 07:32:45,291 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=68.2 pTM=0.442 ipTM=0.339 tol=2.02
2024-12-07 07:32:59,656 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=68.2 pTM=0.441 ipTM=0.351 tol=0.932
2024-12-07 07:33:14,030 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=68.4 pTM=0.442 ipTM=0.359 tol=0.973
2024-12-07 07:33:28,423 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=68 pTM=0.441 ipTM=0.346 tol=1.31
2024-12-07 07:33:42,806 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=68.3 pTM=0.442 ipTM=0.349 tol=1.27
2024-12-07 07:33:57,173 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=68.3 pTM=0.441 ipTM=0.333 tol=2.54
2024-12-07 07:34:11,546 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=68.4 pTM=0.442 ipTM=0.364 tol=2.29
2024-12-07 07:34:25,920 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=68.5 pTM=0.441 ipTM=0.337 tol=1.34
2024-12-07 07:34:40,290 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=68.4 pTM=0.441 ipTM=0.339 tol=1.28
2024-12-07 07:34:54,662 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=68.5 pTM=0.442 ipTM=0.347 tol=1.21
2024-12-07 07:35:09,033 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=68.3 pTM=0.442 ipTM=0.348 tol=1.82
2024-12-07 07:35:23,396 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=68.4 pTM=0.443 ipTM=0.354 tol=1.11
2024-12-07 07:35:37,774 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=68.4 pTM=0.442 ipTM=0.344 tol=1.39
2024-12-07 07:35:52,145 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=68.4 pTM=0.443 ipTM=0.359 tol=1.37
2024-12-07 07:36:06,520 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=68.5 pTM=0.442 ipTM=0.333 tol=0.963
2024-12-07 07:36:20,894 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=68.4 pTM=0.441 ipTM=0.346 tol=1.1
2024-12-07 07:36:35,274 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=67.9 pTM=0.441 ipTM=0.327 tol=1.76
2024-12-07 07:36:49,674 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=68.4 pTM=0.441 ipTM=0.332 tol=1.33
2024-12-07 07:37:04,056 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=68.4 pTM=0.44 ipTM=0.331 tol=1.23
2024-12-07 07:37:18,422 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=68.2 pTM=0.44 ipTM=0.334 tol=1.06
2024-12-07 07:37:32,802 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=68.4 pTM=0.44 ipTM=0.322 tol=1.27
2024-12-07 07:37:47,182 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=68.2 pTM=0.441 ipTM=0.345 tol=1.25
2024-12-07 07:38:01,558 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=68.3 pTM=0.442 ipTM=0.336 tol=1.11
2024-12-07 07:38:15,930 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=68.3 pTM=0.442 ipTM=0.358 tol=0.997
2024-12-07 07:38:30,305 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=68.2 pTM=0.44 ipTM=0.338 tol=0.833
2024-12-07 07:38:30,306 alphafold2_multimer_v3_model_4_seed_000 took 445.6s (30 recycles)
2024-12-07 07:38:45,132 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=62 pTM=0.474 ipTM=0.442
2024-12-07 07:38:59,547 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=63 pTM=0.467 ipTM=0.341 tol=7.55
2024-12-07 07:39:13,943 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=64 pTM=0.467 ipTM=0.363 tol=5.07
2024-12-07 07:39:28,333 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=64.5 pTM=0.466 ipTM=0.313 tol=3.59
2024-12-07 07:39:42,735 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.1 pTM=0.477 ipTM=0.346 tol=3.27
2024-12-07 07:39:57,124 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63.8 pTM=0.488 ipTM=0.317 tol=2.61
2024-12-07 07:40:11,522 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=64.4 pTM=0.484 ipTM=0.367 tol=2.06
2024-12-07 07:40:25,924 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=64.9 pTM=0.464 ipTM=0.321 tol=2.62
2024-12-07 07:40:40,329 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.4 pTM=0.456 ipTM=0.374 tol=3.08
2024-12-07 07:40:54,746 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.7 pTM=0.452 ipTM=0.317 tol=3.44
2024-12-07 07:41:09,174 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=66.5 pTM=0.451 ipTM=0.371 tol=3.06
2024-12-07 07:41:23,599 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=66.4 pTM=0.451 ipTM=0.331 tol=6.36
2024-12-07 07:41:38,005 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=66.6 pTM=0.45 ipTM=0.364 tol=4.93
2024-12-07 07:41:52,418 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66.9 pTM=0.452 ipTM=0.342 tol=4.71
2024-12-07 07:42:06,826 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67 pTM=0.452 ipTM=0.353 tol=3.12
2024-12-07 07:42:21,242 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.4 pTM=0.45 ipTM=0.329 tol=3.75
2024-12-07 07:42:35,641 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.6 pTM=0.45 ipTM=0.347 tol=4.95
2024-12-07 07:42:50,030 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67 pTM=0.458 ipTM=0.316 tol=5.56
2024-12-07 07:43:04,430 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.7 pTM=0.453 ipTM=0.367 tol=3.44
2024-12-07 07:43:18,833 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.8 pTM=0.45 ipTM=0.313 tol=2.65
2024-12-07 07:43:33,242 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.1 pTM=0.454 ipTM=0.34 tol=2.07
2024-12-07 07:43:47,632 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.3 pTM=0.456 ipTM=0.303 tol=4.78
2024-12-07 07:44:02,023 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.4 pTM=0.453 ipTM=0.325 tol=1.49
2024-12-07 07:44:16,410 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66.6 pTM=0.463 ipTM=0.325 tol=5.11
2024-12-07 07:44:30,806 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.4 pTM=0.448 ipTM=0.32 tol=5.18
2024-12-07 07:44:45,209 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67.5 pTM=0.449 ipTM=0.324 tol=3.69
2024-12-07 07:44:59,613 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=68.2 pTM=0.449 ipTM=0.321 tol=2.33
2024-12-07 07:45:14,007 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.9 pTM=0.452 ipTM=0.34 tol=2.5
2024-12-07 07:45:28,395 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.1 pTM=0.449 ipTM=0.294 tol=3.84
2024-12-07 07:45:42,789 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=68.3 pTM=0.453 ipTM=0.358 tol=2.14
2024-12-07 07:45:57,194 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=68.1 pTM=0.448 ipTM=0.311 tol=3.16
2024-12-07 07:45:57,195 alphafold2_multimer_v3_model_5_seed_000 took 446.4s (30 recycles)
2024-12-07 07:45:57,638 reranking models by 'multimer' metric
2024-12-07 07:46:00,598 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 07:46:53,478 Relaxation took 55.8s
2024-12-07 07:46:53,478 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.7 pTM=0.449 ipTM=0.372
2024-12-07 07:47:38,644 Relaxation took 45.2s
2024-12-07 07:47:38,644 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=68.2 pTM=0.44 ipTM=0.338
2024-12-07 07:48:27,330 Relaxation took 48.7s
2024-12-07 07:48:27,330 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=69.2 pTM=0.451 ipTM=0.334
2024-12-07 07:49:20,656 Relaxation took 53.3s
2024-12-07 07:49:20,657 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=68.1 pTM=0.448 ipTM=0.311
2024-12-07 07:50:43,158 Relaxation took 82.5s
2024-12-07 07:50:43,158 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=69.1 pTM=0.457 ipTM=0.281
2024-12-07 07:50:44,692 Done