2024-12-07 07:07:54,080 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 07:07:54,401 Running on GPU
2024-12-07 07:07:57,889 Found 6 citations for tools or databases
2024-12-07 07:07:57,889 Query 1/1: MNAT1_CCNO (length 659)
2024-12-07 07:07:58,369 Sleeping for 8s. Reason: PENDING
2024-12-07 07:08:06,639 Sleeping for 9s. Reason: RUNNING
2024-12-07 07:08:15,901 Sleeping for 5s. Reason: RUNNING
2024-12-07 07:08:21,159 Sleeping for 10s. Reason: RUNNING
2024-12-07 07:08:31,419 Sleeping for 5s. Reason: RUNNING
2024-12-07 07:08:36,670 Sleeping for 10s. Reason: RUNNING
2024-12-07 07:08:46,930 Sleeping for 5s. Reason: RUNNING
2024-12-07 07:08:52,190 Sleeping for 8s. Reason: RUNNING
2024-12-07 07:09:01,940 Sleeping for 5s. Reason: PENDING
2024-12-07 07:09:07,197 Sleeping for 10s. Reason: RUNNING
2024-12-07 07:09:17,460 Sleeping for 8s. Reason: RUNNING
2024-12-07 07:09:25,715 Sleeping for 9s. Reason: RUNNING
2024-12-07 07:09:34,979 Sleeping for 7s. Reason: RUNNING
2024-12-07 07:09:44,632 Setting max_seq=508, max_extra_seq=2048
2024-12-07 07:12:29,189 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.4 pTM=0.483 ipTM=0.203
2024-12-07 07:12:37,871 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=70.3 pTM=0.476 ipTM=0.202 tol=6.91
2024-12-07 07:12:46,574 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=71.1 pTM=0.491 ipTM=0.266 tol=7.64
2024-12-07 07:12:55,273 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=71.9 pTM=0.494 ipTM=0.271 tol=2.63
2024-12-07 07:13:03,988 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.8 pTM=0.504 ipTM=0.304 tol=1.46
2024-12-07 07:13:12,711 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72.6 pTM=0.513 ipTM=0.329 tol=1.14
2024-12-07 07:13:21,425 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=73.3 pTM=0.529 ipTM=0.397 tol=2.39
2024-12-07 07:13:30,157 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=72.9 pTM=0.521 ipTM=0.348 tol=1.66
2024-12-07 07:13:38,891 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=73.2 pTM=0.522 ipTM=0.352 tol=0.885
2024-12-07 07:13:47,628 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=74.1 pTM=0.544 ipTM=0.422 tol=2.69
2024-12-07 07:13:56,373 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=73.3 pTM=0.526 ipTM=0.323 tol=1.13
2024-12-07 07:14:05,112 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=73.1 pTM=0.525 ipTM=0.325 tol=0.899
2024-12-07 07:14:13,857 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=73.9 pTM=0.535 ipTM=0.324 tol=1.12
2024-12-07 07:14:22,613 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=73.1 pTM=0.514 ipTM=0.367 tol=1.71
2024-12-07 07:14:31,373 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.7 pTM=0.492 ipTM=0.323 tol=1.64
2024-12-07 07:14:40,128 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=73.5 pTM=0.514 ipTM=0.392 tol=2.31
2024-12-07 07:14:48,885 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=73.3 pTM=0.528 ipTM=0.337 tol=2.29
2024-12-07 07:14:57,648 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73.7 pTM=0.524 ipTM=0.337 tol=2.61
2024-12-07 07:15:06,404 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=74.2 pTM=0.545 ipTM=0.343 tol=1.43
2024-12-07 07:15:15,163 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=73.3 pTM=0.525 ipTM=0.32 tol=1.87
2024-12-07 07:15:23,930 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=73.3 pTM=0.518 ipTM=0.309 tol=2.41
2024-12-07 07:15:32,693 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=73.8 pTM=0.536 ipTM=0.341 tol=2.04
2024-12-07 07:15:41,466 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=73.6 pTM=0.539 ipTM=0.334 tol=1.41
2024-12-07 07:15:50,234 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=73.3 pTM=0.512 ipTM=0.296 tol=1.36
2024-12-07 07:15:59,008 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=73 pTM=0.502 ipTM=0.307 tol=2.24
2024-12-07 07:16:07,779 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=72.9 pTM=0.495 ipTM=0.338 tol=2.3
2024-12-07 07:16:16,551 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73.5 pTM=0.511 ipTM=0.376 tol=3.37
2024-12-07 07:16:25,324 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=72.8 pTM=0.492 ipTM=0.32 tol=2.79
2024-12-07 07:16:34,096 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.4 pTM=0.487 ipTM=0.283 tol=2.39
2024-12-07 07:16:42,869 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72.9 pTM=0.495 ipTM=0.364 tol=1.7
2024-12-07 07:16:51,643 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.5 pTM=0.49 ipTM=0.306 tol=1.81
2024-12-07 07:16:51,644 alphafold2_multimer_v3_model_1_seed_000 took 422.0s (30 recycles)
2024-12-07 07:17:00,723 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=69.5 pTM=0.497 ipTM=0.445
2024-12-07 07:17:09,530 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=71.8 pTM=0.485 ipTM=0.449 tol=7.64
2024-12-07 07:17:18,328 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=73 pTM=0.49 ipTM=0.457 tol=3.77
2024-12-07 07:17:27,120 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=73.5 pTM=0.493 ipTM=0.479 tol=3.02
2024-12-07 07:17:35,920 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=73.8 pTM=0.494 ipTM=0.486 tol=1.58
2024-12-07 07:17:44,708 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=73.8 pTM=0.499 ipTM=0.483 tol=1.5
2024-12-07 07:17:53,487 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=74.1 pTM=0.505 ipTM=0.502 tol=1.47
2024-12-07 07:18:02,259 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=74.3 pTM=0.535 ipTM=0.502 tol=4.17
2024-12-07 07:18:11,021 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=74.7 pTM=0.568 ipTM=0.478 tol=1.53
2024-12-07 07:18:19,798 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.9 pTM=0.583 ipTM=0.485 tol=1.83
2024-12-07 07:18:28,573 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=75.1 pTM=0.592 ipTM=0.471 tol=4.02
2024-12-07 07:18:37,348 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=75 pTM=0.59 ipTM=0.48 tol=2.59
2024-12-07 07:18:46,119 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=75.1 pTM=0.595 ipTM=0.493 tol=2.01
2024-12-07 07:18:54,899 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=75.2 pTM=0.597 ipTM=0.485 tol=1.63
2024-12-07 07:19:03,671 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=75.3 pTM=0.605 ipTM=0.5 tol=1.79
2024-12-07 07:19:12,453 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=75.4 pTM=0.606 ipTM=0.493 tol=1.04
2024-12-07 07:19:21,233 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=75.5 pTM=0.612 ipTM=0.502 tol=0.731
2024-12-07 07:19:30,006 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=75.6 pTM=0.612 ipTM=0.492 tol=2.74
2024-12-07 07:19:38,765 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=75.2 pTM=0.609 ipTM=0.489 tol=3.28
2024-12-07 07:19:47,536 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=75.5 pTM=0.613 ipTM=0.502 tol=3.92
2024-12-07 07:19:56,313 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=75.4 pTM=0.613 ipTM=0.496 tol=1.32
2024-12-07 07:20:05,085 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=75.4 pTM=0.61 ipTM=0.497 tol=2.09
2024-12-07 07:20:13,864 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=75.2 pTM=0.608 ipTM=0.486 tol=4.55
2024-12-07 07:20:22,635 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=75.2 pTM=0.604 ipTM=0.486 tol=4.25
2024-12-07 07:20:31,392 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=75.2 pTM=0.608 ipTM=0.487 tol=2.43
2024-12-07 07:20:40,150 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=75.2 pTM=0.604 ipTM=0.492 tol=1.07
2024-12-07 07:20:48,913 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=75.2 pTM=0.604 ipTM=0.489 tol=2.63
2024-12-07 07:20:57,682 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=75.2 pTM=0.606 ipTM=0.482 tol=4.02
2024-12-07 07:21:06,451 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=75.1 pTM=0.604 ipTM=0.483 tol=2.29
2024-12-07 07:21:15,220 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=75.1 pTM=0.603 ipTM=0.484 tol=3.75
2024-12-07 07:21:24,000 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=75 pTM=0.601 ipTM=0.484 tol=3.08
2024-12-07 07:21:24,000 alphafold2_multimer_v3_model_2_seed_000 took 272.1s (30 recycles)
2024-12-07 07:21:33,121 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=69.6 pTM=0.452 ipTM=0.146
2024-12-07 07:21:41,959 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=70.8 pTM=0.451 ipTM=0.142 tol=13.3
2024-12-07 07:21:50,785 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=71.2 pTM=0.467 ipTM=0.426 tol=9.36
2024-12-07 07:21:59,584 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=71.3 pTM=0.47 ipTM=0.424 tol=3.91
2024-12-07 07:22:08,379 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=71.8 pTM=0.472 ipTM=0.435 tol=2.01
2024-12-07 07:22:17,169 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=71.6 pTM=0.472 ipTM=0.427 tol=1.58
2024-12-07 07:22:25,958 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=71.9 pTM=0.471 ipTM=0.421 tol=2.02
2024-12-07 07:22:34,746 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=71.8 pTM=0.472 ipTM=0.419 tol=1.65
2024-12-07 07:22:43,537 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=71.9 pTM=0.473 ipTM=0.404 tol=1.32
2024-12-07 07:22:52,334 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=72.1 pTM=0.473 ipTM=0.405 tol=1.42
2024-12-07 07:23:01,129 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.7 pTM=0.473 ipTM=0.378 tol=1.27
2024-12-07 07:23:09,911 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=71.7 pTM=0.473 ipTM=0.397 tol=1.91
2024-12-07 07:23:18,703 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71.8 pTM=0.476 ipTM=0.385 tol=2.08
2024-12-07 07:23:27,501 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=71.9 pTM=0.476 ipTM=0.4 tol=0.836
2024-12-07 07:23:36,288 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=71.8 pTM=0.478 ipTM=0.407 tol=1.32
2024-12-07 07:23:45,081 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=72.1 pTM=0.476 ipTM=0.417 tol=1.66
2024-12-07 07:23:53,865 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=71.9 pTM=0.475 ipTM=0.409 tol=1.23
2024-12-07 07:24:02,652 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=72 pTM=0.475 ipTM=0.411 tol=0.862
2024-12-07 07:24:11,440 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=71.9 pTM=0.473 ipTM=0.424 tol=1.08
2024-12-07 07:24:20,238 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=72 pTM=0.476 ipTM=0.422 tol=1.04
2024-12-07 07:24:29,033 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=72 pTM=0.477 ipTM=0.398 tol=1.28
2024-12-07 07:24:37,830 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=72.2 pTM=0.48 ipTM=0.43 tol=1.17
2024-12-07 07:24:46,623 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=72 pTM=0.478 ipTM=0.438 tol=1.17
2024-12-07 07:24:55,413 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=72 pTM=0.477 ipTM=0.417 tol=1.59
2024-12-07 07:25:04,203 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=72 pTM=0.476 ipTM=0.411 tol=1.03
2024-12-07 07:25:13,002 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=72 pTM=0.477 ipTM=0.418 tol=0.725
2024-12-07 07:25:21,790 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=72 pTM=0.478 ipTM=0.418 tol=1.09
2024-12-07 07:25:30,579 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=71.9 pTM=0.478 ipTM=0.412 tol=0.913
2024-12-07 07:25:39,371 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=72 pTM=0.481 ipTM=0.432 tol=0.956
2024-12-07 07:25:48,169 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=71.9 pTM=0.482 ipTM=0.443 tol=1.17
2024-12-07 07:25:56,959 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=71.9 pTM=0.48 ipTM=0.436 tol=0.899
2024-12-07 07:25:56,960 alphafold2_multimer_v3_model_3_seed_000 took 272.7s (30 recycles)
2024-12-07 07:26:06,054 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.9 pTM=0.457 ipTM=0.217
2024-12-07 07:26:14,862 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=68.4 pTM=0.477 ipTM=0.314 tol=12.3
2024-12-07 07:26:23,645 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=70.2 pTM=0.48 ipTM=0.258 tol=3.31
2024-12-07 07:26:32,424 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=70.4 pTM=0.465 ipTM=0.172 tol=2.74
2024-12-07 07:26:41,215 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70.8 pTM=0.461 ipTM=0.156 tol=1.58
2024-12-07 07:26:50,005 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.8 pTM=0.46 ipTM=0.156 tol=0.986
2024-12-07 07:26:58,797 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=70.6 pTM=0.458 ipTM=0.152 tol=1.5
2024-12-07 07:27:07,588 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=70.8 pTM=0.462 ipTM=0.217 tol=2.09
2024-12-07 07:27:16,371 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.5 pTM=0.456 ipTM=0.148 tol=1.56
2024-12-07 07:27:25,168 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.4 pTM=0.456 ipTM=0.182 tol=1.29
2024-12-07 07:27:33,964 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=69.9 pTM=0.455 ipTM=0.148 tol=1.44
2024-12-07 07:27:42,756 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=69.9 pTM=0.456 ipTM=0.145 tol=1.44
2024-12-07 07:27:51,548 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=69.9 pTM=0.455 ipTM=0.145 tol=1.72
2024-12-07 07:28:00,332 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=69.9 pTM=0.457 ipTM=0.179 tol=1.54
2024-12-07 07:28:09,121 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=69.4 pTM=0.456 ipTM=0.148 tol=1.15
2024-12-07 07:28:17,910 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=69.9 pTM=0.457 ipTM=0.191 tol=1.22
2024-12-07 07:28:26,706 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=69.7 pTM=0.454 ipTM=0.145 tol=1.52
2024-12-07 07:28:35,490 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=69.9 pTM=0.457 ipTM=0.202 tol=2.24
2024-12-07 07:28:44,278 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=69.5 pTM=0.454 ipTM=0.146 tol=1.77
2024-12-07 07:28:53,066 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.1 pTM=0.461 ipTM=0.169 tol=2.24
2024-12-07 07:29:01,849 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.1 pTM=0.458 ipTM=0.151 tol=1.96
2024-12-07 07:29:10,642 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.3 pTM=0.458 ipTM=0.15 tol=1.18
2024-12-07 07:29:19,422 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=69.8 pTM=0.458 ipTM=0.154 tol=1.76
2024-12-07 07:29:28,216 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.4 pTM=0.455 ipTM=0.144 tol=1.87
2024-12-07 07:29:37,002 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.2 pTM=0.458 ipTM=0.163 tol=2.2
2024-12-07 07:29:45,784 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.2 pTM=0.459 ipTM=0.196 tol=1.19
2024-12-07 07:29:54,565 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.2 pTM=0.454 ipTM=0.145 tol=1.83
2024-12-07 07:30:03,349 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.3 pTM=0.452 ipTM=0.141 tol=1.5
2024-12-07 07:30:12,129 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=69.8 pTM=0.457 ipTM=0.151 tol=2.06
2024-12-07 07:30:20,906 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=69.8 pTM=0.463 ipTM=0.23 tol=1.65
2024-12-07 07:30:29,688 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=69.6 pTM=0.456 ipTM=0.149 tol=2.15
2024-12-07 07:30:29,689 alphafold2_multimer_v3_model_4_seed_000 took 272.4s (30 recycles)
2024-12-07 07:30:38,780 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.6 pTM=0.466 ipTM=0.314
2024-12-07 07:30:47,591 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=67.9 pTM=0.456 ipTM=0.167 tol=7.67
2024-12-07 07:30:56,410 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=69.4 pTM=0.449 ipTM=0.131 tol=4.59
2024-12-07 07:31:05,229 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=70.4 pTM=0.448 ipTM=0.126 tol=3.52
2024-12-07 07:31:14,066 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=70.8 pTM=0.448 ipTM=0.123 tol=2.76
2024-12-07 07:31:22,892 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=70.8 pTM=0.449 ipTM=0.126 tol=2.05
2024-12-07 07:31:31,708 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=70.2 pTM=0.451 ipTM=0.13 tol=2.46
2024-12-07 07:31:40,520 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=70 pTM=0.467 ipTM=0.347 tol=5.94
2024-12-07 07:31:49,331 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=69.8 pTM=0.472 ipTM=0.341 tol=4.7
2024-12-07 07:31:58,136 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=69.9 pTM=0.476 ipTM=0.358 tol=1.8
2024-12-07 07:32:06,941 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=69.8 pTM=0.475 ipTM=0.391 tol=1.21
2024-12-07 07:32:15,738 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=70.2 pTM=0.479 ipTM=0.39 tol=1.75
2024-12-07 07:32:24,535 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=70.5 pTM=0.478 ipTM=0.356 tol=1.9
2024-12-07 07:32:33,336 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=71 pTM=0.476 ipTM=0.382 tol=1.03
2024-12-07 07:32:42,131 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=70.6 pTM=0.477 ipTM=0.384 tol=2.04
2024-12-07 07:32:50,931 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=71.2 pTM=0.479 ipTM=0.401 tol=1.04
2024-12-07 07:32:59,732 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=71 pTM=0.478 ipTM=0.353 tol=0.904
2024-12-07 07:33:08,532 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=71.3 pTM=0.476 ipTM=0.381 tol=1.38
2024-12-07 07:33:17,325 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=70.9 pTM=0.481 ipTM=0.35 tol=1.17
2024-12-07 07:33:26,120 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=71.6 pTM=0.483 ipTM=0.373 tol=1.15
2024-12-07 07:33:34,907 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=71.1 pTM=0.481 ipTM=0.332 tol=1.01
2024-12-07 07:33:43,694 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=71.8 pTM=0.484 ipTM=0.423 tol=0.705
2024-12-07 07:33:52,492 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=70.8 pTM=0.483 ipTM=0.4 tol=0.82
2024-12-07 07:34:01,281 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=71.5 pTM=0.482 ipTM=0.379 tol=1.55
2024-12-07 07:34:10,077 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=71.2 pTM=0.479 ipTM=0.382 tol=1.36
2024-12-07 07:34:18,871 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=71.3 pTM=0.481 ipTM=0.385 tol=0.883
2024-12-07 07:34:27,670 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=71.4 pTM=0.48 ipTM=0.351 tol=1.39
2024-12-07 07:34:36,470 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=71.4 pTM=0.477 ipTM=0.37 tol=1.26
2024-12-07 07:34:45,265 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=71.1 pTM=0.481 ipTM=0.376 tol=1.34
2024-12-07 07:34:54,068 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=71.2 pTM=0.478 ipTM=0.391 tol=1.4
2024-12-07 07:35:02,864 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=71.2 pTM=0.481 ipTM=0.353 tol=1.17
2024-12-07 07:35:02,864 alphafold2_multimer_v3_model_5_seed_000 took 272.9s (30 recycles)
2024-12-07 07:35:03,145 reranking models by 'multimer' metric
2024-12-07 07:35:06,138 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 07:35:35,907 Relaxation took 32.8s
2024-12-07 07:35:35,907 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=75 pTM=0.601 ipTM=0.484
2024-12-07 07:36:11,567 Relaxation took 35.7s
2024-12-07 07:36:11,567 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=71.9 pTM=0.48 ipTM=0.436
2024-12-07 07:36:30,570 Relaxation took 19.0s
2024-12-07 07:36:30,570 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=71.2 pTM=0.481 ipTM=0.353
2024-12-07 07:37:12,176 Relaxation took 41.6s
2024-12-07 07:37:12,176 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.5 pTM=0.49 ipTM=0.306
2024-12-07 07:37:37,990 Relaxation took 25.8s
2024-12-07 07:37:37,990 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=69.6 pTM=0.456 ipTM=0.149
2024-12-07 07:37:39,202 Done