2024-12-07 07:38:14,067 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 07:38:14,360 Running on GPU
2024-12-07 07:38:17,946 Found 6 citations for tools or databases
2024-12-07 07:38:17,946 Query 1/1: MUL1_CXCR4 (length 704)
2024-12-07 07:38:18,225 Sleeping for 10s. Reason: PENDING
2024-12-07 07:38:28,479 Sleeping for 6s. Reason: RUNNING
2024-12-07 07:38:34,740 Sleeping for 6s. Reason: RUNNING
2024-12-07 07:38:40,989 Sleeping for 10s. Reason: RUNNING
2024-12-07 07:38:51,250 Sleeping for 7s. Reason: RUNNING
2024-12-07 07:38:58,503 Sleeping for 6s. Reason: RUNNING
2024-12-07 07:39:04,754 Sleeping for 6s. Reason: RUNNING
2024-12-07 07:39:11,007 Sleeping for 9s. Reason: RUNNING
2024-12-07 07:39:20,291 Sleeping for 10s. Reason: RUNNING
2024-12-07 07:39:30,556 Sleeping for 7s. Reason: RUNNING
2024-12-07 07:39:37,813 Sleeping for 10s. Reason: RUNNING
2024-12-07 07:39:48,071 Sleeping for 5s. Reason: RUNNING
2024-12-07 07:39:53,329 Sleeping for 7s. Reason: RUNNING
2024-12-07 07:40:00,587 Sleeping for 8s. Reason: RUNNING
2024-12-07 07:40:08,840 Sleeping for 9s. Reason: RUNNING
2024-12-07 07:40:18,106 Sleeping for 5s. Reason: RUNNING
2024-12-07 07:40:23,359 Sleeping for 6s. Reason: RUNNING
2024-12-07 07:40:29,613 Sleeping for 8s. Reason: RUNNING
2024-12-07 07:40:39,558 Sleeping for 7s. Reason: PENDING
2024-12-07 07:40:46,823 Sleeping for 10s. Reason: RUNNING
2024-12-07 07:40:57,077 Sleeping for 9s. Reason: RUNNING
2024-12-07 07:41:06,340 Sleeping for 6s. Reason: RUNNING
2024-12-07 07:41:12,605 Sleeping for 7s. Reason: RUNNING
2024-12-07 07:41:19,864 Sleeping for 9s. Reason: RUNNING
2024-12-07 07:41:29,129 Sleeping for 10s. Reason: RUNNING
2024-12-07 07:41:39,388 Sleeping for 8s. Reason: RUNNING
2024-12-07 07:41:47,647 Sleeping for 9s. Reason: RUNNING
2024-12-07 07:41:56,905 Sleeping for 5s. Reason: RUNNING
2024-12-07 07:42:02,154 Sleeping for 5s. Reason: RUNNING
2024-12-07 07:42:07,416 Sleeping for 5s. Reason: RUNNING
2024-12-07 07:42:12,690 Sleeping for 10s. Reason: RUNNING
2024-12-07 07:42:25,072 Setting max_seq=508, max_extra_seq=2048
2024-12-07 07:44:23,579 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=72.2 pTM=0.417 ipTM=0.139
2024-12-07 07:44:32,439 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=75 pTM=0.424 ipTM=0.189 tol=3.83
2024-12-07 07:44:41,314 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=74.7 pTM=0.419 ipTM=0.152 tol=1.79
2024-12-07 07:44:50,199 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=74.4 pTM=0.414 ipTM=0.142 tol=1.05
2024-12-07 07:44:59,097 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=74.8 pTM=0.416 ipTM=0.134 tol=1.32
2024-12-07 07:45:08,002 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=74.5 pTM=0.415 ipTM=0.128 tol=1.57
2024-12-07 07:45:16,922 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=74.5 pTM=0.415 ipTM=0.125 tol=3.56
2024-12-07 07:45:25,847 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=74.5 pTM=0.413 ipTM=0.124 tol=2.21
2024-12-07 07:45:34,786 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=74.3 pTM=0.412 ipTM=0.121 tol=3.75
2024-12-07 07:45:43,726 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=74.4 pTM=0.414 ipTM=0.122 tol=1.78
2024-12-07 07:45:52,666 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=74.6 pTM=0.416 ipTM=0.125 tol=2.39
2024-12-07 07:46:01,602 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=74.2 pTM=0.416 ipTM=0.125 tol=1.69
2024-12-07 07:46:10,538 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=74.3 pTM=0.42 ipTM=0.128 tol=2.13
2024-12-07 07:46:19,474 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=74.5 pTM=0.42 ipTM=0.128 tol=0.938
2024-12-07 07:46:28,425 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=74.4 pTM=0.421 ipTM=0.127 tol=2.09
2024-12-07 07:46:37,369 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=74 pTM=0.418 ipTM=0.126 tol=2.01
2024-12-07 07:46:46,326 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=74.2 pTM=0.42 ipTM=0.127 tol=3.12
2024-12-07 07:46:55,275 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73.9 pTM=0.417 ipTM=0.13 tol=1.86
2024-12-07 07:47:04,225 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=73.8 pTM=0.418 ipTM=0.128 tol=0.822
2024-12-07 07:47:13,166 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=74.1 pTM=0.419 ipTM=0.128 tol=2.1
2024-12-07 07:47:22,107 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=73.8 pTM=0.417 ipTM=0.128 tol=1.53
2024-12-07 07:47:31,051 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=73.8 pTM=0.416 ipTM=0.127 tol=0.815
2024-12-07 07:47:39,999 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=73.8 pTM=0.416 ipTM=0.127 tol=0.476
2024-12-07 07:47:40,000 alphafold2_multimer_v3_model_1_seed_000 took 310.5s (22 recycles)
2024-12-07 07:47:49,240 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=70.1 pTM=0.421 ipTM=0.175
2024-12-07 07:47:58,170 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=71.4 pTM=0.409 ipTM=0.154 tol=2.63
2024-12-07 07:48:07,113 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=72.2 pTM=0.407 ipTM=0.141 tol=4.09
2024-12-07 07:48:16,064 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=72.3 pTM=0.404 ipTM=0.139 tol=1.83
2024-12-07 07:48:25,021 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=73.1 pTM=0.408 ipTM=0.136 tol=2.85
2024-12-07 07:48:33,976 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=72.6 pTM=0.406 ipTM=0.136 tol=0.687
2024-12-07 07:48:42,939 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=72.8 pTM=0.408 ipTM=0.133 tol=1.72
2024-12-07 07:48:51,907 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=73.2 pTM=0.409 ipTM=0.129 tol=3.98
2024-12-07 07:49:00,875 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=72.9 pTM=0.407 ipTM=0.126 tol=0.867
2024-12-07 07:49:09,841 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=73.2 pTM=0.411 ipTM=0.128 tol=6.41
2024-12-07 07:49:18,804 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=73.8 pTM=0.415 ipTM=0.126 tol=4.07
2024-12-07 07:49:27,767 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=73.1 pTM=0.409 ipTM=0.127 tol=2.94
2024-12-07 07:49:36,731 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=73.1 pTM=0.411 ipTM=0.132 tol=10.9
2024-12-07 07:49:45,677 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=73.1 pTM=0.412 ipTM=0.138 tol=5.3
2024-12-07 07:49:54,631 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=72.7 pTM=0.408 ipTM=0.135 tol=1.89
2024-12-07 07:50:03,587 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=72.3 pTM=0.406 ipTM=0.132 tol=0.983
2024-12-07 07:50:12,548 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=73.2 pTM=0.408 ipTM=0.133 tol=1.39
2024-12-07 07:50:21,497 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=73.1 pTM=0.406 ipTM=0.133 tol=0.931
2024-12-07 07:50:30,462 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=73.2 pTM=0.408 ipTM=0.133 tol=1.9
2024-12-07 07:50:39,420 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=73.2 pTM=0.407 ipTM=0.135 tol=0.938
2024-12-07 07:50:48,379 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=72.7 pTM=0.406 ipTM=0.136 tol=0.674
2024-12-07 07:50:57,333 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=73.1 pTM=0.407 ipTM=0.136 tol=0.808
2024-12-07 07:51:06,288 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=72.8 pTM=0.407 ipTM=0.136 tol=0.662
2024-12-07 07:51:15,237 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=72.9 pTM=0.405 ipTM=0.138 tol=0.808
2024-12-07 07:51:24,185 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=72.8 pTM=0.407 ipTM=0.136 tol=0.603
2024-12-07 07:51:33,132 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=72.7 pTM=0.405 ipTM=0.137 tol=1.16
2024-12-07 07:51:42,090 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=72.5 pTM=0.403 ipTM=0.135 tol=1.41
2024-12-07 07:51:51,062 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=73 pTM=0.406 ipTM=0.133 tol=2.11
2024-12-07 07:52:00,021 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=72.8 pTM=0.406 ipTM=0.132 tol=1.83
2024-12-07 07:52:08,978 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=72.8 pTM=0.405 ipTM=0.133 tol=1.43
2024-12-07 07:52:17,941 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=72.9 pTM=0.406 ipTM=0.135 tol=0.896
2024-12-07 07:52:17,942 alphafold2_multimer_v3_model_2_seed_000 took 277.6s (30 recycles)
2024-12-07 07:52:27,162 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=70.8 pTM=0.479 ipTM=0.29
2024-12-07 07:52:36,075 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=73.1 pTM=0.441 ipTM=0.178 tol=4.54
2024-12-07 07:52:44,994 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=73 pTM=0.45 ipTM=0.193 tol=2.6
2024-12-07 07:52:53,910 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=72.9 pTM=0.443 ipTM=0.176 tol=1.28
2024-12-07 07:53:02,834 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=73.4 pTM=0.444 ipTM=0.175 tol=0.587
2024-12-07 07:53:11,748 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=73.1 pTM=0.451 ipTM=0.185 tol=1.15
2024-12-07 07:53:20,659 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=73.2 pTM=0.45 ipTM=0.184 tol=0.766
2024-12-07 07:53:29,578 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=73.4 pTM=0.457 ipTM=0.194 tol=1.11
2024-12-07 07:53:38,505 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=73.6 pTM=0.453 ipTM=0.185 tol=1.55
2024-12-07 07:53:47,431 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=73.2 pTM=0.456 ipTM=0.196 tol=1.23
2024-12-07 07:53:56,347 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=73.7 pTM=0.452 ipTM=0.182 tol=0.959
2024-12-07 07:54:05,258 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=73.2 pTM=0.45 ipTM=0.19 tol=0.722
2024-12-07 07:54:14,184 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=73.2 pTM=0.452 ipTM=0.188 tol=0.947
2024-12-07 07:54:23,117 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=73.4 pTM=0.452 ipTM=0.189 tol=0.936
2024-12-07 07:54:32,042 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=73 pTM=0.45 ipTM=0.189 tol=0.723
2024-12-07 07:54:40,969 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=73.1 pTM=0.449 ipTM=0.189 tol=0.61
2024-12-07 07:54:49,897 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=73.1 pTM=0.449 ipTM=0.191 tol=0.603
2024-12-07 07:54:58,803 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=73.4 pTM=0.451 ipTM=0.187 tol=0.895
2024-12-07 07:55:07,724 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=73.2 pTM=0.454 ipTM=0.193 tol=0.855
2024-12-07 07:55:16,648 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=73.4 pTM=0.451 ipTM=0.188 tol=0.534
2024-12-07 07:55:25,578 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=73.2 pTM=0.453 ipTM=0.193 tol=1.07
2024-12-07 07:55:34,511 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=73.2 pTM=0.45 ipTM=0.187 tol=1.17
2024-12-07 07:55:43,437 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=73.2 pTM=0.452 ipTM=0.192 tol=1.25
2024-12-07 07:55:52,360 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=73.4 pTM=0.45 ipTM=0.188 tol=1.23
2024-12-07 07:56:01,286 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=73.3 pTM=0.451 ipTM=0.19 tol=1.63
2024-12-07 07:56:10,213 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=73.1 pTM=0.448 ipTM=0.186 tol=1.73
2024-12-07 07:56:19,142 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=73.4 pTM=0.451 ipTM=0.186 tol=0.301
2024-12-07 07:56:19,142 alphafold2_multimer_v3_model_3_seed_000 took 240.9s (26 recycles)
2024-12-07 07:56:28,381 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=71.9 pTM=0.52 ipTM=0.352
2024-12-07 07:56:37,309 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=74.3 pTM=0.457 ipTM=0.179 tol=6.26
2024-12-07 07:56:46,237 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=74 pTM=0.461 ipTM=0.187 tol=2.21
2024-12-07 07:56:55,161 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=74.1 pTM=0.457 ipTM=0.168 tol=1.27
2024-12-07 07:57:04,081 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=74.3 pTM=0.464 ipTM=0.197 tol=2.43
2024-12-07 07:57:13,007 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=74.2 pTM=0.46 ipTM=0.176 tol=1.29
2024-12-07 07:57:21,930 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=74.8 pTM=0.459 ipTM=0.181 tol=1.59
2024-12-07 07:57:30,860 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=74.4 pTM=0.459 ipTM=0.189 tol=1.7
2024-12-07 07:57:39,789 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=74.8 pTM=0.458 ipTM=0.188 tol=1.04
2024-12-07 07:57:48,716 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=74.4 pTM=0.457 ipTM=0.191 tol=2.01
2024-12-07 07:57:57,648 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=74.9 pTM=0.454 ipTM=0.184 tol=1.17
2024-12-07 07:58:06,578 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=74.4 pTM=0.452 ipTM=0.18 tol=1.79
2024-12-07 07:58:15,518 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=74.7 pTM=0.453 ipTM=0.187 tol=0.787
2024-12-07 07:58:24,453 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=74.4 pTM=0.453 ipTM=0.191 tol=4.87
2024-12-07 07:58:33,373 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=74.5 pTM=0.458 ipTM=0.208 tol=1.37
2024-12-07 07:58:42,309 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=74.6 pTM=0.457 ipTM=0.206 tol=2.58
2024-12-07 07:58:51,236 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=74.9 pTM=0.46 ipTM=0.22 tol=2.88
2024-12-07 07:59:00,173 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=74.8 pTM=0.459 ipTM=0.21 tol=2.86
2024-12-07 07:59:09,097 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=74.6 pTM=0.466 ipTM=0.232 tol=4.27
2024-12-07 07:59:18,029 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=74.9 pTM=0.461 ipTM=0.213 tol=4.89
2024-12-07 07:59:26,953 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=74.6 pTM=0.462 ipTM=0.223 tol=6.09
2024-12-07 07:59:35,872 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=74.6 pTM=0.461 ipTM=0.233 tol=2.02
2024-12-07 07:59:44,800 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=74.6 pTM=0.465 ipTM=0.224 tol=1.82
2024-12-07 07:59:53,737 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=74.6 pTM=0.461 ipTM=0.223 tol=1.33
2024-12-07 08:00:02,671 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=75 pTM=0.461 ipTM=0.208 tol=3.42
2024-12-07 08:00:11,592 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=74.7 pTM=0.463 ipTM=0.236 tol=2.62
2024-12-07 08:00:20,530 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=74.7 pTM=0.459 ipTM=0.212 tol=3.78
2024-12-07 08:00:29,460 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=74.8 pTM=0.462 ipTM=0.229 tol=5.12
2024-12-07 08:00:38,389 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=74.6 pTM=0.458 ipTM=0.223 tol=1.05
2024-12-07 08:00:47,313 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=74.5 pTM=0.457 ipTM=0.218 tol=1.24
2024-12-07 08:00:56,248 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=74.7 pTM=0.458 ipTM=0.211 tol=3.82
2024-12-07 08:00:56,248 alphafold2_multimer_v3_model_4_seed_000 took 276.8s (30 recycles)
2024-12-07 08:01:05,464 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=70.9 pTM=0.476 ipTM=0.253
2024-12-07 08:01:14,376 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=73.9 pTM=0.459 ipTM=0.205 tol=3.6
2024-12-07 08:01:23,289 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=73.3 pTM=0.473 ipTM=0.242 tol=2.31
2024-12-07 08:01:32,200 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=73.4 pTM=0.465 ipTM=0.219 tol=0.918
2024-12-07 08:01:41,112 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=73.6 pTM=0.472 ipTM=0.241 tol=1.57
2024-12-07 08:01:50,031 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=73.4 pTM=0.467 ipTM=0.221 tol=1.68
2024-12-07 08:01:58,945 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=73.6 pTM=0.47 ipTM=0.225 tol=1.31
2024-12-07 08:02:07,861 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=73.8 pTM=0.467 ipTM=0.219 tol=3.39
2024-12-07 08:02:16,778 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=73.7 pTM=0.467 ipTM=0.226 tol=1.29
2024-12-07 08:02:25,683 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=73.6 pTM=0.466 ipTM=0.22 tol=1.25
2024-12-07 08:02:34,608 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=73.9 pTM=0.464 ipTM=0.211 tol=1.47
2024-12-07 08:02:43,515 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=73.6 pTM=0.467 ipTM=0.221 tol=1.75
2024-12-07 08:02:52,432 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=73.5 pTM=0.464 ipTM=0.215 tol=1.05
2024-12-07 08:03:01,334 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=73.8 pTM=0.466 ipTM=0.222 tol=1.45
2024-12-07 08:03:10,251 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=73.4 pTM=0.462 ipTM=0.214 tol=2.02
2024-12-07 08:03:19,162 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=73.2 pTM=0.463 ipTM=0.221 tol=1.37
2024-12-07 08:03:28,077 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=73.4 pTM=0.461 ipTM=0.213 tol=1.11
2024-12-07 08:03:36,987 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=73.6 pTM=0.464 ipTM=0.223 tol=1.59
2024-12-07 08:03:45,899 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=73.6 pTM=0.463 ipTM=0.219 tol=1.04
2024-12-07 08:03:54,811 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=73.6 pTM=0.466 ipTM=0.221 tol=1.1
2024-12-07 08:04:03,723 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=73.6 pTM=0.463 ipTM=0.207 tol=1.05
2024-12-07 08:04:12,636 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=73.6 pTM=0.466 ipTM=0.223 tol=1.7
2024-12-07 08:04:21,559 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=73.6 pTM=0.461 ipTM=0.208 tol=1.49
2024-12-07 08:04:30,477 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=73.7 pTM=0.461 ipTM=0.221 tol=0.88
2024-12-07 08:04:39,386 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=73.8 pTM=0.46 ipTM=0.208 tol=0.82
2024-12-07 08:04:48,299 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=73.5 pTM=0.462 ipTM=0.22 tol=1.29
2024-12-07 08:04:57,217 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=73.5 pTM=0.459 ipTM=0.208 tol=1.91
2024-12-07 08:05:06,120 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=73.8 pTM=0.464 ipTM=0.222 tol=2.09
2024-12-07 08:05:15,038 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=73.6 pTM=0.462 ipTM=0.217 tol=1.39
2024-12-07 08:05:23,951 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=73.7 pTM=0.463 ipTM=0.218 tol=1.33
2024-12-07 08:05:32,864 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=73.4 pTM=0.459 ipTM=0.205 tol=2.24
2024-12-07 08:05:32,865 alphafold2_multimer_v3_model_5_seed_000 took 276.3s (30 recycles)
2024-12-07 08:05:33,180 reranking models by 'multimer' metric
2024-12-07 08:05:35,995 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 08:05:58,435 Relaxation took 25.3s
2024-12-07 08:05:58,435 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=74.7 pTM=0.458 ipTM=0.211
2024-12-07 08:06:18,914 Relaxation took 20.5s
2024-12-07 08:06:18,914 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=73.4 pTM=0.459 ipTM=0.205
2024-12-07 08:07:06,877 Relaxation took 48.0s
2024-12-07 08:07:06,877 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=73.4 pTM=0.451 ipTM=0.186
2024-12-07 08:14:51,170 Relaxation took 464.3s
2024-12-07 08:14:51,170 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=72.9 pTM=0.406 ipTM=0.135
2024-12-07 08:15:42,250 Relaxation took 51.1s
2024-12-07 08:15:42,251 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=73.8 pTM=0.416 ipTM=0.127
2024-12-07 08:15:43,539 Done