2024-12-07 07:51:24,449 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-07 07:51:24,804 Running on GPU 2024-12-07 07:51:29,271 Found 6 citations for tools or databases 2024-12-07 07:51:29,271 Query 1/1: MUL1_TH1L (length 942) 2024-12-07 07:51:29,558 Sleeping for 5s. Reason: PENDING 2024-12-07 07:51:34,812 Sleeping for 9s. Reason: RUNNING 2024-12-07 07:51:44,070 Sleeping for 5s. Reason: RUNNING 2024-12-07 07:51:49,325 Sleeping for 6s. Reason: RUNNING 2024-12-07 07:51:55,580 Sleeping for 6s. Reason: RUNNING 2024-12-07 07:52:01,835 Sleeping for 10s. Reason: RUNNING 2024-12-07 07:52:12,100 Sleeping for 10s. Reason: RUNNING 2024-12-07 07:52:22,361 Sleeping for 10s. Reason: RUNNING 2024-12-07 07:52:32,631 Sleeping for 6s. Reason: RUNNING 2024-12-07 07:52:38,900 Sleeping for 10s. Reason: RUNNING 2024-12-07 07:52:49,167 Sleeping for 5s. Reason: RUNNING 2024-12-07 07:52:54,429 Sleeping for 7s. Reason: RUNNING 2024-12-07 07:53:03,115 Sleeping for 9s. Reason: PENDING 2024-12-07 07:53:12,374 Sleeping for 9s. Reason: RUNNING 2024-12-07 07:53:21,637 Sleeping for 7s. Reason: RUNNING 2024-12-07 07:53:28,895 Sleeping for 10s. Reason: RUNNING 2024-12-07 07:53:39,156 Sleeping for 7s. Reason: RUNNING 2024-12-07 07:53:46,413 Sleeping for 10s. Reason: RUNNING 2024-12-07 07:53:58,799 Setting max_seq=508, max_extra_seq=2048 2024-12-07 07:57:26,339 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=76.1 pTM=0.462 ipTM=0.141 2024-12-07 07:57:49,167 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=78.3 pTM=0.476 ipTM=0.127 tol=7.02 2024-12-07 07:58:12,099 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=77.6 pTM=0.463 ipTM=0.125 tol=13.4 2024-12-07 07:58:35,057 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=78.2 pTM=0.467 ipTM=0.131 tol=5.2 2024-12-07 07:58:58,003 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=79.1 pTM=0.474 ipTM=0.132 tol=7.38 2024-12-07 07:59:20,897 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=79.4 pTM=0.487 ipTM=0.152 tol=7.87 2024-12-07 07:59:43,825 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=79.6 pTM=0.485 ipTM=0.147 tol=1.39 2024-12-07 08:00:06,767 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=79.2 pTM=0.476 ipTM=0.144 tol=2.21 2024-12-07 08:00:29,729 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=79.3 pTM=0.474 ipTM=0.136 tol=1.82 2024-12-07 08:00:52,704 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=79.2 pTM=0.472 ipTM=0.135 tol=1.72 2024-12-07 08:01:15,691 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=79.2 pTM=0.468 ipTM=0.132 tol=2.3 2024-12-07 08:01:38,683 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=79.1 pTM=0.464 ipTM=0.133 tol=3.3 2024-12-07 08:02:01,680 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=79.4 pTM=0.465 ipTM=0.132 tol=2.76 2024-12-07 08:02:24,671 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=79.1 pTM=0.463 ipTM=0.135 tol=3.08 2024-12-07 08:02:47,696 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=79.2 pTM=0.46 ipTM=0.137 tol=3.19 2024-12-07 08:03:10,721 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=79 pTM=0.457 ipTM=0.132 tol=2.55 2024-12-07 08:03:33,755 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=79.1 pTM=0.454 ipTM=0.128 tol=1.74 2024-12-07 08:03:56,776 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=78.8 pTM=0.458 ipTM=0.13 tol=13.1 2024-12-07 08:04:19,756 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=79.1 pTM=0.469 ipTM=0.14 tol=7.85 2024-12-07 08:04:42,712 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=79.1 pTM=0.474 ipTM=0.144 tol=2.85 2024-12-07 08:05:05,665 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=79.4 pTM=0.474 ipTM=0.139 tol=2.44 2024-12-07 08:05:28,629 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=79.4 pTM=0.475 ipTM=0.138 tol=2.93 2024-12-07 08:05:51,610 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=79.4 pTM=0.47 ipTM=0.134 tol=2.37 2024-12-07 08:06:14,584 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=79.3 pTM=0.467 ipTM=0.134 tol=2.46 2024-12-07 08:06:37,561 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=79.2 pTM=0.467 ipTM=0.135 tol=3 2024-12-07 08:07:00,553 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=79.3 pTM=0.464 ipTM=0.134 tol=3.56 2024-12-07 08:07:23,531 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=79.3 pTM=0.462 ipTM=0.139 tol=3.45 2024-12-07 08:07:46,531 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=78.9 pTM=0.457 ipTM=0.138 tol=2.58 2024-12-07 08:08:09,541 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=78.8 pTM=0.46 ipTM=0.134 tol=3.57 2024-12-07 08:08:32,564 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=78.6 pTM=0.457 ipTM=0.134 tol=3.73 2024-12-07 08:08:55,623 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=78.5 pTM=0.454 ipTM=0.13 tol=2.63 2024-12-07 08:08:55,624 alphafold2_multimer_v3_model_1_seed_000 took 889.8s (30 recycles) 2024-12-07 08:09:19,446 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=77.9 pTM=0.485 ipTM=0.14 2024-12-07 08:09:42,642 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=78.8 pTM=0.5 ipTM=0.146 tol=6.19 2024-12-07 08:10:05,865 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=78.1 pTM=0.482 ipTM=0.132 tol=11.8 2024-12-07 08:10:29,078 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=79.4 pTM=0.492 ipTM=0.137 tol=5.58 2024-12-07 08:10:52,268 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=79.3 pTM=0.488 ipTM=0.139 tol=4.47 2024-12-07 08:11:15,445 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=78.9 pTM=0.478 ipTM=0.135 tol=2.78 2024-12-07 08:11:38,625 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=79.1 pTM=0.478 ipTM=0.134 tol=2.04 2024-12-07 08:12:01,764 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=79.1 pTM=0.478 ipTM=0.137 tol=2.28 2024-12-07 08:12:24,873 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=79.2 pTM=0.479 ipTM=0.136 tol=2.11 2024-12-07 08:12:48,013 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=79.4 pTM=0.481 ipTM=0.135 tol=3.19 2024-12-07 08:13:11,173 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=79.1 pTM=0.479 ipTM=0.137 tol=3.33 2024-12-07 08:13:34,294 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=79.1 pTM=0.477 ipTM=0.14 tol=4.9 2024-12-07 08:13:57,388 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=78.9 pTM=0.477 ipTM=0.139 tol=3.19 2024-12-07 08:14:20,497 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=78.7 pTM=0.476 ipTM=0.138 tol=2.95 2024-12-07 08:14:43,628 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=78.6 pTM=0.471 ipTM=0.137 tol=2.27 2024-12-07 08:15:06,725 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=78.8 pTM=0.476 ipTM=0.138 tol=1.31 2024-12-07 08:15:29,823 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=78.8 pTM=0.472 ipTM=0.138 tol=1.07 2024-12-07 08:15:52,971 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=78.7 pTM=0.471 ipTM=0.138 tol=0.787 2024-12-07 08:16:16,095 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=78.9 pTM=0.473 ipTM=0.139 tol=1.61 2024-12-07 08:16:39,177 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=78.5 pTM=0.47 ipTM=0.138 tol=0.886 2024-12-07 08:17:02,298 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=78.6 pTM=0.474 ipTM=0.137 tol=1.1 2024-12-07 08:17:25,408 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=78.8 pTM=0.473 ipTM=0.137 tol=1.5 2024-12-07 08:17:48,538 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=78.5 pTM=0.47 ipTM=0.138 tol=1.04 2024-12-07 08:18:11,678 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=78.9 pTM=0.473 ipTM=0.139 tol=1.95 2024-12-07 08:18:34,819 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=78.8 pTM=0.473 ipTM=0.139 tol=1.48 2024-12-07 08:18:57,965 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=78.8 pTM=0.473 ipTM=0.138 tol=1.11 2024-12-07 08:19:21,112 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=78.5 pTM=0.471 ipTM=0.136 tol=2.14 2024-12-07 08:19:44,223 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=78.6 pTM=0.472 ipTM=0.137 tol=1.03 2024-12-07 08:20:07,326 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=78.6 pTM=0.476 ipTM=0.139 tol=1.02 2024-12-07 08:20:30,505 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=78.6 pTM=0.473 ipTM=0.137 tol=0.723 2024-12-07 08:20:53,643 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=78.4 pTM=0.472 ipTM=0.135 tol=1.62 2024-12-07 08:20:53,644 alphafold2_multimer_v3_model_2_seed_000 took 717.3s (30 recycles) 2024-12-07 08:21:17,402 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=76.7 pTM=0.481 ipTM=0.128 2024-12-07 08:21:40,487 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=77.1 pTM=0.486 ipTM=0.133 tol=15 2024-12-07 08:22:03,545 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=78 pTM=0.488 ipTM=0.139 tol=16.4 2024-12-07 08:22:26,580 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=77.6 pTM=0.485 ipTM=0.14 tol=5.19 2024-12-07 08:22:49,649 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=78.4 pTM=0.488 ipTM=0.146 tol=6.46 2024-12-07 08:23:12,714 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=77.4 pTM=0.483 ipTM=0.139 tol=8.48 2024-12-07 08:23:35,770 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=78.6 pTM=0.489 ipTM=0.147 tol=9.25 2024-12-07 08:23:58,832 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=77.2 pTM=0.48 ipTM=0.14 tol=7.45 2024-12-07 08:24:21,866 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=78.7 pTM=0.496 ipTM=0.152 tol=7.73 2024-12-07 08:24:44,921 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=78.2 pTM=0.488 ipTM=0.147 tol=4.1 2024-12-07 08:25:07,969 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=78.1 pTM=0.486 ipTM=0.143 tol=4.18 2024-12-07 08:25:31,008 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=77.5 pTM=0.48 ipTM=0.137 tol=6.45 2024-12-07 08:25:54,033 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=78.9 pTM=0.496 ipTM=0.144 tol=5.62 2024-12-07 08:26:17,032 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=78 pTM=0.49 ipTM=0.141 tol=4.16 2024-12-07 08:26:40,053 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=78.7 pTM=0.492 ipTM=0.146 tol=4.36 2024-12-07 08:27:03,060 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=77.8 pTM=0.488 ipTM=0.143 tol=3.56 2024-12-07 08:27:26,072 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=79.2 pTM=0.5 ipTM=0.147 tol=4.05 2024-12-07 08:27:49,127 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=78.2 pTM=0.49 ipTM=0.146 tol=3.13 2024-12-07 08:28:12,131 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=78.9 pTM=0.491 ipTM=0.148 tol=3.15 2024-12-07 08:28:35,130 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=77.6 pTM=0.479 ipTM=0.145 tol=4.16 2024-12-07 08:28:58,152 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=79.1 pTM=0.501 ipTM=0.152 tol=4.21 2024-12-07 08:29:21,136 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=78.2 pTM=0.493 ipTM=0.144 tol=4.04 2024-12-07 08:29:44,162 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=78.8 pTM=0.494 ipTM=0.148 tol=4.1 2024-12-07 08:30:07,201 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=77.7 pTM=0.488 ipTM=0.142 tol=5.79 2024-12-07 08:30:30,205 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=78.7 pTM=0.497 ipTM=0.149 tol=5.03 2024-12-07 08:30:53,183 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=78 pTM=0.492 ipTM=0.147 tol=2.4 2024-12-07 08:31:16,205 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=78.8 pTM=0.492 ipTM=0.151 tol=4.7 2024-12-07 08:31:39,228 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=78.1 pTM=0.491 ipTM=0.147 tol=3.8 2024-12-07 08:32:02,225 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=78.7 pTM=0.492 ipTM=0.151 tol=3.47 2024-12-07 08:32:25,261 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=78.2 pTM=0.493 ipTM=0.147 tol=4.39 2024-12-07 08:32:48,268 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=78.9 pTM=0.49 ipTM=0.153 tol=5.13 2024-12-07 08:32:48,269 alphafold2_multimer_v3_model_3_seed_000 took 713.9s (30 recycles) 2024-12-07 08:33:12,032 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=76.2 pTM=0.446 ipTM=0.12 2024-12-07 08:33:35,113 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=78.2 pTM=0.463 ipTM=0.131 tol=14 2024-12-07 08:33:58,202 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=78.8 pTM=0.47 ipTM=0.129 tol=5.6 2024-12-07 08:34:21,250 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=79.5 pTM=0.477 ipTM=0.132 tol=3.61 2024-12-07 08:34:44,350 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=80 pTM=0.485 ipTM=0.13 tol=2.82 2024-12-07 08:35:07,435 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=79.4 pTM=0.48 ipTM=0.132 tol=4.18 2024-12-07 08:35:30,525 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=79.6 pTM=0.478 ipTM=0.132 tol=5.05 2024-12-07 08:35:53,638 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=79.5 pTM=0.477 ipTM=0.127 tol=3.74 2024-12-07 08:36:16,705 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=79.6 pTM=0.478 ipTM=0.126 tol=4.66 2024-12-07 08:36:39,770 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=79.6 pTM=0.477 ipTM=0.127 tol=1.38 2024-12-07 08:37:02,836 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=79.3 pTM=0.475 ipTM=0.127 tol=3.37 2024-12-07 08:37:25,907 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=79.4 pTM=0.473 ipTM=0.13 tol=3.82 2024-12-07 08:37:48,967 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=79.5 pTM=0.477 ipTM=0.128 tol=4.37 2024-12-07 08:38:12,041 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=79.6 pTM=0.479 ipTM=0.127 tol=3.09 2024-12-07 08:38:35,094 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=79.8 pTM=0.476 ipTM=0.126 tol=2.42 2024-12-07 08:38:58,122 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=80.1 pTM=0.479 ipTM=0.133 tol=3.1 2024-12-07 08:39:21,168 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=80.2 pTM=0.478 ipTM=0.128 tol=4.09 2024-12-07 08:39:44,189 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=80.2 pTM=0.479 ipTM=0.136 tol=2.25 2024-12-07 08:40:07,227 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=80.5 pTM=0.48 ipTM=0.135 tol=1.08 2024-12-07 08:40:30,268 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=80.2 pTM=0.477 ipTM=0.134 tol=1.87 2024-12-07 08:40:53,292 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=80.2 pTM=0.48 ipTM=0.138 tol=1.22 2024-12-07 08:41:16,327 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=80.1 pTM=0.48 ipTM=0.139 tol=2.08 2024-12-07 08:41:39,350 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=80.2 pTM=0.479 ipTM=0.14 tol=2.6 2024-12-07 08:42:02,397 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=80.2 pTM=0.48 ipTM=0.14 tol=1.18 2024-12-07 08:42:25,452 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=80.1 pTM=0.477 ipTM=0.138 tol=0.928 2024-12-07 08:42:48,502 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=80 pTM=0.479 ipTM=0.139 tol=3.29 2024-12-07 08:43:11,537 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=80.2 pTM=0.48 ipTM=0.138 tol=3.23 2024-12-07 08:43:34,580 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=80.2 pTM=0.481 ipTM=0.137 tol=0.943 2024-12-07 08:43:57,629 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=80.3 pTM=0.483 ipTM=0.135 tol=1.88 2024-12-07 08:44:20,658 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=80.2 pTM=0.482 ipTM=0.139 tol=1.3 2024-12-07 08:44:43,689 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=80.2 pTM=0.481 ipTM=0.135 tol=2.56 2024-12-07 08:44:43,690 alphafold2_multimer_v3_model_4_seed_000 took 714.7s (30 recycles) 2024-12-07 08:45:07,452 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=75.1 pTM=0.467 ipTM=0.132 2024-12-07 08:45:30,545 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=77.1 pTM=0.494 ipTM=0.132 tol=3.83 2024-12-07 08:45:53,693 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=76.7 pTM=0.481 ipTM=0.125 tol=9.51 2024-12-07 08:46:16,778 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=77.7 pTM=0.486 ipTM=0.129 tol=8.66 2024-12-07 08:46:39,861 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=78 pTM=0.488 ipTM=0.132 tol=5.26 2024-12-07 08:47:02,997 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=78.2 pTM=0.495 ipTM=0.131 tol=3.33 2024-12-07 08:47:26,100 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=78.2 pTM=0.488 ipTM=0.132 tol=3.34 2024-12-07 08:47:49,213 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=78.2 pTM=0.487 ipTM=0.133 tol=2.91 2024-12-07 08:48:12,314 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=78.3 pTM=0.484 ipTM=0.132 tol=2.4 2024-12-07 08:48:35,426 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=78.4 pTM=0.49 ipTM=0.132 tol=1.63 2024-12-07 08:48:58,529 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=78.1 pTM=0.481 ipTM=0.132 tol=1.84 2024-12-07 08:49:21,624 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=78.1 pTM=0.481 ipTM=0.133 tol=2.09 2024-12-07 08:49:44,728 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=78.2 pTM=0.48 ipTM=0.134 tol=1.89 2024-12-07 08:50:07,840 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=78.9 pTM=0.5 ipTM=0.136 tol=1.88 2024-12-07 08:50:30,946 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=78.4 pTM=0.489 ipTM=0.137 tol=3.04 2024-12-07 08:50:54,049 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=78.4 pTM=0.488 ipTM=0.136 tol=3.32 2024-12-07 08:51:17,146 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=78.4 pTM=0.482 ipTM=0.132 tol=1.19 2024-12-07 08:51:40,249 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=78.6 pTM=0.488 ipTM=0.134 tol=0.947 2024-12-07 08:52:03,344 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=78.5 pTM=0.483 ipTM=0.133 tol=2.42 2024-12-07 08:52:26,423 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=78.6 pTM=0.483 ipTM=0.133 tol=2.88 2024-12-07 08:52:49,497 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=78.6 pTM=0.482 ipTM=0.136 tol=2.97 2024-12-07 08:53:12,552 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=78.6 pTM=0.484 ipTM=0.138 tol=3.7 2024-12-07 08:53:35,655 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=78.6 pTM=0.482 ipTM=0.14 tol=1.61 2024-12-07 08:53:58,729 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=78.9 pTM=0.491 ipTM=0.141 tol=2.35 2024-12-07 08:54:21,787 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=78.9 pTM=0.487 ipTM=0.14 tol=2.23 2024-12-07 08:54:44,841 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=78.7 pTM=0.484 ipTM=0.139 tol=1.3 2024-12-07 08:55:07,905 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=79.1 pTM=0.486 ipTM=0.14 tol=1.08 2024-12-07 08:55:30,965 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=79.2 pTM=0.494 ipTM=0.141 tol=1.76 2024-12-07 08:55:54,021 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=78.9 pTM=0.49 ipTM=0.139 tol=3.53 2024-12-07 08:56:17,073 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=79 pTM=0.489 ipTM=0.14 tol=3.27 2024-12-07 08:56:40,125 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=78.9 pTM=0.488 ipTM=0.142 tol=1.34 2024-12-07 08:56:40,126 alphafold2_multimer_v3_model_5_seed_000 took 715.7s (30 recycles) 2024-12-07 08:56:40,824 reranking models by 'multimer' metric 2024-12-07 08:56:44,291 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-07 08:59:13,893 Relaxation took 153.1s 2024-12-07 08:59:13,893 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=78.9 pTM=0.49 ipTM=0.153 2024-12-07 09:01:12,062 Relaxation took 118.2s 2024-12-07 09:01:12,062 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=78.9 pTM=0.488 ipTM=0.142 2024-12-07 09:01:46,888 Relaxation took 34.8s 2024-12-07 09:01:46,889 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=80.2 pTM=0.481 ipTM=0.135 2024-12-07 09:03:19,018 Relaxation took 92.1s 2024-12-07 09:03:19,018 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=78.4 pTM=0.472 ipTM=0.135 2024-12-07 09:05:07,601 Relaxation took 108.6s 2024-12-07 09:05:07,601 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=78.5 pTM=0.454 ipTM=0.13 2024-12-07 09:05:09,672 Done