2024-12-07 08:36:24,243 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 08:36:24,593 Running on GPU
2024-12-07 08:36:28,119 Found 6 citations for tools or databases
2024-12-07 08:36:28,119 Query 1/1: NEDD4L_MS4A10 (length 1242)
2024-12-07 08:36:28,446 Sleeping for 6s. Reason: PENDING
2024-12-07 08:36:34,710 Sleeping for 7s. Reason: PENDING
2024-12-07 08:36:41,965 Sleeping for 9s. Reason: PENDING
2024-12-07 08:36:51,233 Sleeping for 7s. Reason: RUNNING
2024-12-07 08:36:58,493 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:37:03,749 Sleeping for 9s. Reason: RUNNING
2024-12-07 08:37:13,010 Sleeping for 7s. Reason: RUNNING
2024-12-07 08:37:20,270 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:37:25,529 Sleeping for 8s. Reason: RUNNING
2024-12-07 08:37:33,790 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:37:39,054 Sleeping for 7s. Reason: RUNNING
2024-12-07 08:37:46,320 Sleeping for 7s. Reason: RUNNING
2024-12-07 08:37:53,578 Sleeping for 9s. Reason: RUNNING
2024-12-07 08:38:02,838 Sleeping for 6s. Reason: RUNNING
2024-12-07 08:38:09,094 Sleeping for 6s. Reason: RUNNING
2024-12-07 08:38:15,362 Sleeping for 7s. Reason: RUNNING
2024-12-07 08:38:22,620 Sleeping for 8s. Reason: RUNNING
2024-12-07 08:38:30,881 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:38:36,139 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:38:41,395 Sleeping for 10s. Reason: RUNNING
2024-12-07 08:38:51,658 Sleeping for 8s. Reason: RUNNING
2024-12-07 08:38:59,924 Sleeping for 10s. Reason: RUNNING
2024-12-07 08:39:10,175 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:39:15,437 Sleeping for 8s. Reason: RUNNING
2024-12-07 08:39:23,706 Sleeping for 9s. Reason: RUNNING
2024-12-07 08:39:32,959 Sleeping for 8s. Reason: RUNNING
2024-12-07 08:39:41,226 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:39:46,481 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:39:51,741 Sleeping for 7s. Reason: RUNNING
2024-12-07 08:39:58,999 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:40:04,254 Sleeping for 7s. Reason: RUNNING
2024-12-07 08:40:11,518 Sleeping for 10s. Reason: RUNNING
2024-12-07 08:40:21,775 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:40:27,036 Sleeping for 10s. Reason: RUNNING
2024-12-07 08:40:37,308 Sleeping for 10s. Reason: RUNNING
2024-12-07 08:40:47,570 Sleeping for 10s. Reason: RUNNING
2024-12-07 08:40:57,831 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:41:03,092 Sleeping for 6s. Reason: RUNNING
2024-12-07 08:41:09,347 Sleeping for 7s. Reason: RUNNING
2024-12-07 08:41:16,605 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:41:21,862 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:41:27,131 Sleeping for 7s. Reason: RUNNING
2024-12-07 08:41:34,388 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:41:39,641 Sleeping for 6s. Reason: RUNNING
2024-12-07 08:41:45,899 Sleeping for 6s. Reason: RUNNING
2024-12-07 08:41:52,301 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:41:59,725 Sleeping for 7s. Reason: PENDING
2024-12-07 08:42:06,981 Sleeping for 9s. Reason: PENDING
2024-12-07 08:42:16,250 Sleeping for 9s. Reason: RUNNING
2024-12-07 08:42:25,515 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:42:30,770 Sleeping for 8s. Reason: RUNNING
2024-12-07 08:42:39,032 Sleeping for 6s. Reason: RUNNING
2024-12-07 08:42:45,295 Sleeping for 9s. Reason: RUNNING
2024-12-07 08:42:54,566 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:42:59,819 Sleeping for 7s. Reason: RUNNING
2024-12-07 08:43:07,080 Sleeping for 8s. Reason: RUNNING
2024-12-07 08:43:15,338 Sleeping for 10s. Reason: RUNNING
2024-12-07 08:43:25,599 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:43:30,856 Sleeping for 6s. Reason: RUNNING
2024-12-07 08:43:37,110 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:43:42,367 Sleeping for 8s. Reason: RUNNING
2024-12-07 08:43:50,634 Sleeping for 9s. Reason: RUNNING
2024-12-07 08:43:59,905 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:44:05,161 Sleeping for 9s. Reason: RUNNING
2024-12-07 08:44:14,419 Sleeping for 8s. Reason: RUNNING
2024-12-07 08:44:22,683 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:44:27,940 Sleeping for 10s. Reason: RUNNING
2024-12-07 08:44:38,206 Sleeping for 10s. Reason: RUNNING
2024-12-07 08:44:48,469 Sleeping for 10s. Reason: RUNNING
2024-12-07 08:44:58,736 Sleeping for 5s. Reason: RUNNING
2024-12-07 08:45:03,991 Sleeping for 10s. Reason: RUNNING
2024-12-07 08:45:14,254 Sleeping for 7s. Reason: RUNNING
2024-12-07 08:45:21,512 Sleeping for 10s. Reason: RUNNING
2024-12-07 08:45:38,280 Setting max_seq=508, max_extra_seq=1883
2024-12-07 08:49:33,320 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=56.3 pTM=0.387 ipTM=0.154
2024-12-07 08:50:13,490 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=57.2 pTM=0.371 ipTM=0.207 tol=15.5
2024-12-07 08:50:53,851 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=56.9 pTM=0.358 ipTM=0.205 tol=9.25
2024-12-07 08:51:34,343 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=57.3 pTM=0.352 ipTM=0.203 tol=4.82
2024-12-07 08:52:14,876 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=57.5 pTM=0.354 ipTM=0.21 tol=3.15
2024-12-07 08:52:55,455 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=57.6 pTM=0.351 ipTM=0.203 tol=2.23
2024-12-07 08:53:36,114 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=57.2 pTM=0.343 ipTM=0.197 tol=2.1
2024-12-07 08:54:16,720 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=57.7 pTM=0.353 ipTM=0.196 tol=1.54
2024-12-07 08:54:57,302 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=57.8 pTM=0.353 ipTM=0.191 tol=2.5
2024-12-07 08:55:37,897 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=58 pTM=0.359 ipTM=0.191 tol=4.42
2024-12-07 08:56:18,507 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=57.8 pTM=0.358 ipTM=0.193 tol=4.73
2024-12-07 08:56:59,134 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=57.8 pTM=0.359 ipTM=0.192 tol=7
2024-12-07 08:57:39,729 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=57.7 pTM=0.355 ipTM=0.198 tol=3.7
2024-12-07 08:58:20,355 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=58.2 pTM=0.365 ipTM=0.2 tol=3.47
2024-12-07 08:59:00,957 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=58.2 pTM=0.367 ipTM=0.194 tol=2.7
2024-12-07 08:59:41,563 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=58 pTM=0.365 ipTM=0.194 tol=2.59
2024-12-07 09:00:22,173 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=57.8 pTM=0.361 ipTM=0.197 tol=2.38
2024-12-07 09:01:02,794 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=57.9 pTM=0.362 ipTM=0.192 tol=2.79
2024-12-07 09:01:43,464 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=58 pTM=0.363 ipTM=0.192 tol=3.94
2024-12-07 09:02:24,095 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=57.9 pTM=0.361 ipTM=0.189 tol=3.43
2024-12-07 09:03:04,741 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=57.8 pTM=0.362 ipTM=0.19 tol=4.09
2024-12-07 09:03:45,342 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=57.8 pTM=0.362 ipTM=0.192 tol=3.98
2024-12-07 09:04:25,924 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=57.4 pTM=0.353 ipTM=0.195 tol=2.23
2024-12-07 09:05:06,568 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=57.7 pTM=0.355 ipTM=0.191 tol=2.4
2024-12-07 09:05:47,128 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=57.7 pTM=0.358 ipTM=0.193 tol=2.29
2024-12-07 09:06:27,665 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=57.8 pTM=0.362 ipTM=0.189 tol=2.9
2024-12-07 09:07:08,165 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=58 pTM=0.359 ipTM=0.19 tol=3.38
2024-12-07 09:07:48,669 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=57.8 pTM=0.361 ipTM=0.191 tol=3.71
2024-12-07 09:08:29,168 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=58.1 pTM=0.36 ipTM=0.191 tol=3.99
2024-12-07 09:09:09,694 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=57.8 pTM=0.36 ipTM=0.187 tol=4.96
2024-12-07 09:09:50,209 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=58.1 pTM=0.363 ipTM=0.188 tol=4.53
2024-12-07 09:09:50,210 alphafold2_multimer_v3_model_1_seed_000 took 1445.1s (30 recycles)
2024-12-07 09:10:32,009 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=56.9 pTM=0.371 ipTM=0.178
2024-12-07 09:11:12,619 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=57 pTM=0.353 ipTM=0.166 tol=17.1
2024-12-07 09:11:53,298 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=57 pTM=0.34 ipTM=0.16 tol=9.48
2024-12-07 09:12:33,951 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=59.5 pTM=0.405 ipTM=0.161 tol=8.49
2024-12-07 09:13:14,616 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60 pTM=0.411 ipTM=0.153 tol=5.75
2024-12-07 09:13:55,283 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=59.7 pTM=0.407 ipTM=0.15 tol=4.78
2024-12-07 09:14:35,989 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=59.9 pTM=0.407 ipTM=0.148 tol=3.9
2024-12-07 09:15:16,686 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=60 pTM=0.408 ipTM=0.149 tol=3.98
2024-12-07 09:15:57,384 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=60 pTM=0.407 ipTM=0.149 tol=4.17
2024-12-07 09:16:38,084 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=60 pTM=0.408 ipTM=0.149 tol=5.79
2024-12-07 09:17:18,823 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=59.9 pTM=0.406 ipTM=0.147 tol=5.18
2024-12-07 09:17:59,568 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=60.2 pTM=0.408 ipTM=0.148 tol=4.33
2024-12-07 09:18:40,297 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=59.8 pTM=0.406 ipTM=0.148 tol=4.41
2024-12-07 09:19:21,064 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=60.2 pTM=0.407 ipTM=0.148 tol=4.96
2024-12-07 09:20:01,830 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=60.2 pTM=0.408 ipTM=0.149 tol=2.79
2024-12-07 09:20:42,642 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=60.4 pTM=0.408 ipTM=0.148 tol=3.85
2024-12-07 09:21:23,439 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=60.3 pTM=0.408 ipTM=0.148 tol=3.44
2024-12-07 09:22:04,231 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=60.3 pTM=0.407 ipTM=0.148 tol=4.03
2024-12-07 09:22:45,056 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=60.2 pTM=0.405 ipTM=0.146 tol=4.96
2024-12-07 09:23:25,887 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=60.1 pTM=0.407 ipTM=0.147 tol=8.57
2024-12-07 09:24:06,702 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=60.2 pTM=0.408 ipTM=0.147 tol=5.24
2024-12-07 09:24:47,472 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=60.2 pTM=0.407 ipTM=0.147 tol=3.34
2024-12-07 09:25:28,278 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=60.4 pTM=0.409 ipTM=0.148 tol=3.36
2024-12-07 09:26:09,109 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=60.3 pTM=0.408 ipTM=0.149 tol=3.17
2024-12-07 09:26:49,928 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=60.4 pTM=0.409 ipTM=0.146 tol=3.49
2024-12-07 09:27:30,714 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=60.3 pTM=0.408 ipTM=0.147 tol=5.03
2024-12-07 09:28:11,484 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60.3 pTM=0.409 ipTM=0.148 tol=2.71
2024-12-07 09:28:52,234 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=60.3 pTM=0.409 ipTM=0.147 tol=1.98
2024-12-07 09:29:32,938 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=60.4 pTM=0.408 ipTM=0.148 tol=2.92
2024-12-07 09:30:13,632 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=60.5 pTM=0.409 ipTM=0.147 tol=7.03
2024-12-07 09:30:54,363 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=60.6 pTM=0.41 ipTM=0.146 tol=6.36
2024-12-07 09:30:54,364 alphafold2_multimer_v3_model_2_seed_000 took 1263.0s (30 recycles)
2024-12-07 09:31:36,354 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=56.2 pTM=0.359 ipTM=0.164
2024-12-07 09:32:17,088 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=56.8 pTM=0.344 ipTM=0.223 tol=20.2
2024-12-07 09:32:57,794 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=57.3 pTM=0.366 ipTM=0.193 tol=19
2024-12-07 09:33:38,473 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=58.2 pTM=0.38 ipTM=0.206 tol=17
2024-12-07 09:34:19,125 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=58.8 pTM=0.397 ipTM=0.203 tol=12.2
2024-12-07 09:34:59,772 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=59.5 pTM=0.407 ipTM=0.221 tol=13.1
2024-12-07 09:35:40,403 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.4 pTM=0.406 ipTM=0.214 tol=5.96
2024-12-07 09:36:21,010 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=59.8 pTM=0.414 ipTM=0.222 tol=4.56
2024-12-07 09:37:01,622 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=59.6 pTM=0.411 ipTM=0.216 tol=3.22
2024-12-07 09:37:42,281 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=60.2 pTM=0.418 ipTM=0.217 tol=3.94
2024-12-07 09:38:22,906 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=59.9 pTM=0.416 ipTM=0.226 tol=3.62
2024-12-07 09:39:03,519 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60 pTM=0.416 ipTM=0.212 tol=4.11
2024-12-07 09:39:44,140 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=59.8 pTM=0.415 ipTM=0.232 tol=3.01
2024-12-07 09:40:24,783 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.1 pTM=0.416 ipTM=0.231 tol=2.08
2024-12-07 09:41:05,399 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=59.6 pTM=0.411 ipTM=0.227 tol=3.47
2024-12-07 09:41:46,023 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=59.7 pTM=0.41 ipTM=0.232 tol=6.93
2024-12-07 09:42:26,663 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=59.4 pTM=0.405 ipTM=0.214 tol=6.06
2024-12-07 09:43:07,299 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=59.4 pTM=0.409 ipTM=0.221 tol=7.02
2024-12-07 09:43:47,917 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=59.3 pTM=0.408 ipTM=0.217 tol=5.64
2024-12-07 09:44:28,544 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=59.5 pTM=0.41 ipTM=0.22 tol=4.46
2024-12-07 09:45:09,194 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=59.5 pTM=0.41 ipTM=0.21 tol=4.57
2024-12-07 09:45:49,893 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=59.8 pTM=0.412 ipTM=0.219 tol=4.48
2024-12-07 09:46:30,571 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=59.5 pTM=0.41 ipTM=0.218 tol=1.93
2024-12-07 09:47:11,258 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=59.5 pTM=0.409 ipTM=0.211 tol=2.93
2024-12-07 09:47:51,940 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=59.5 pTM=0.41 ipTM=0.216 tol=2.1
2024-12-07 09:48:32,637 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=59.5 pTM=0.412 ipTM=0.212 tol=8.85
2024-12-07 09:49:13,326 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=59.3 pTM=0.41 ipTM=0.211 tol=4.6
2024-12-07 09:49:54,044 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=59.5 pTM=0.412 ipTM=0.216 tol=7.39
2024-12-07 09:50:34,786 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=59.4 pTM=0.408 ipTM=0.203 tol=2.66
2024-12-07 09:51:15,527 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=59.7 pTM=0.412 ipTM=0.205 tol=4.21
2024-12-07 09:51:56,304 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=59.5 pTM=0.411 ipTM=0.203 tol=3.66
2024-12-07 09:51:56,305 alphafold2_multimer_v3_model_3_seed_000 took 1260.7s (30 recycles)
2024-12-07 09:52:38,269 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=54.5 pTM=0.36 ipTM=0.217
2024-12-07 09:53:19,055 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=52.1 pTM=0.36 ipTM=0.196 tol=24.3
2024-12-07 09:53:59,781 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=55.6 pTM=0.384 ipTM=0.179 tol=17.4
2024-12-07 09:54:40,451 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=57.8 pTM=0.425 ipTM=0.173 tol=16.9
2024-12-07 09:55:21,101 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57.5 pTM=0.422 ipTM=0.173 tol=16.4
2024-12-07 09:56:01,749 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=58.3 pTM=0.425 ipTM=0.167 tol=9.23
2024-12-07 09:56:42,364 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.8 pTM=0.429 ipTM=0.17 tol=10.3
2024-12-07 09:57:22,976 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=58.1 pTM=0.426 ipTM=0.169 tol=5.86
2024-12-07 09:58:03,572 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=58.4 pTM=0.428 ipTM=0.167 tol=9.3
2024-12-07 09:58:44,169 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=58.5 pTM=0.428 ipTM=0.169 tol=9.09
2024-12-07 09:59:24,744 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=58 pTM=0.424 ipTM=0.169 tol=3.24
2024-12-07 10:00:05,343 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=58.4 pTM=0.427 ipTM=0.168 tol=8.61
2024-12-07 10:00:45,961 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=58.1 pTM=0.425 ipTM=0.169 tol=7.05
2024-12-07 10:01:26,562 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=58.4 pTM=0.432 ipTM=0.183 tol=6.04
2024-12-07 10:02:07,171 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=58.5 pTM=0.428 ipTM=0.173 tol=6.08
2024-12-07 10:02:47,788 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=58.6 pTM=0.431 ipTM=0.175 tol=6.38
2024-12-07 10:03:28,463 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=58.4 pTM=0.427 ipTM=0.17 tol=6.02
2024-12-07 10:04:09,115 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=58.2 pTM=0.431 ipTM=0.174 tol=7.94
2024-12-07 10:04:49,771 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=58.2 pTM=0.426 ipTM=0.171 tol=5.09
2024-12-07 10:05:30,430 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=58.6 pTM=0.429 ipTM=0.171 tol=3.93
2024-12-07 10:06:11,163 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=58.5 pTM=0.427 ipTM=0.169 tol=8.43
2024-12-07 10:06:51,927 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=58.3 pTM=0.428 ipTM=0.171 tol=9.21
2024-12-07 10:07:32,672 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=58.1 pTM=0.427 ipTM=0.173 tol=5.02
2024-12-07 10:08:13,370 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=58.6 pTM=0.427 ipTM=0.17 tol=8.45
2024-12-07 10:08:54,049 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=58.4 pTM=0.429 ipTM=0.17 tol=7.96
2024-12-07 10:09:34,751 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=58.3 pTM=0.426 ipTM=0.17 tol=9.87
2024-12-07 10:10:15,450 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=58.5 pTM=0.428 ipTM=0.168 tol=5.09
2024-12-07 10:10:56,156 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=58.4 pTM=0.427 ipTM=0.173 tol=5.46
2024-12-07 10:11:36,827 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=58.5 pTM=0.428 ipTM=0.174 tol=3.9
2024-12-07 10:12:17,467 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=58.4 pTM=0.428 ipTM=0.17 tol=9.48
2024-12-07 10:12:58,102 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=58.4 pTM=0.427 ipTM=0.168 tol=4.59
2024-12-07 10:12:58,103 alphafold2_multimer_v3_model_4_seed_000 took 1260.6s (30 recycles)
2024-12-07 10:13:40,112 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=54.8 pTM=0.354 ipTM=0.149
2024-12-07 10:14:20,821 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=55.4 pTM=0.346 ipTM=0.267 tol=23.8
2024-12-07 10:15:01,485 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=56.5 pTM=0.348 ipTM=0.177 tol=14.7
2024-12-07 10:15:42,132 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=57.3 pTM=0.372 ipTM=0.2 tol=7.12
2024-12-07 10:16:22,807 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=57.6 pTM=0.375 ipTM=0.176 tol=7.66
2024-12-07 10:17:03,482 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=57.6 pTM=0.37 ipTM=0.206 tol=5.79
2024-12-07 10:17:44,175 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=57.5 pTM=0.368 ipTM=0.186 tol=8.02
2024-12-07 10:18:24,875 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=57.5 pTM=0.369 ipTM=0.201 tol=6.55
2024-12-07 10:19:05,568 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=57.2 pTM=0.368 ipTM=0.18 tol=8.45
2024-12-07 10:19:46,248 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=57.3 pTM=0.364 ipTM=0.217 tol=7.59
2024-12-07 10:20:26,944 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=56.9 pTM=0.364 ipTM=0.183 tol=6.91
2024-12-07 10:21:07,598 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=56.7 pTM=0.365 ipTM=0.198 tol=7.42
2024-12-07 10:21:48,220 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=57.2 pTM=0.372 ipTM=0.202 tol=6.64
2024-12-07 10:22:28,840 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=57.5 pTM=0.379 ipTM=0.231 tol=6.41
2024-12-07 10:23:09,440 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=57.7 pTM=0.384 ipTM=0.206 tol=4.88
2024-12-07 10:23:50,057 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=57.7 pTM=0.379 ipTM=0.23 tol=3.66
2024-12-07 10:24:30,652 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=57.2 pTM=0.372 ipTM=0.198 tol=5
2024-12-07 10:25:11,261 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=57.3 pTM=0.367 ipTM=0.226 tol=5.67
2024-12-07 10:25:51,897 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=57.3 pTM=0.369 ipTM=0.207 tol=3.02
2024-12-07 10:26:32,531 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=57 pTM=0.367 ipTM=0.204 tol=4.19
2024-12-07 10:27:13,171 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=57.2 pTM=0.368 ipTM=0.21 tol=4.05
2024-12-07 10:27:53,824 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=57.5 pTM=0.371 ipTM=0.208 tol=4.26
2024-12-07 10:28:34,497 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=57.2 pTM=0.367 ipTM=0.204 tol=4.82
2024-12-07 10:29:15,212 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=57.2 pTM=0.365 ipTM=0.199 tol=3.76
2024-12-07 10:29:55,932 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=57.4 pTM=0.367 ipTM=0.21 tol=4.61
2024-12-07 10:30:36,677 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=57.3 pTM=0.368 ipTM=0.19 tol=4.38
2024-12-07 10:31:17,461 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=57.3 pTM=0.365 ipTM=0.189 tol=3.8
2024-12-07 10:31:58,257 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=57.2 pTM=0.369 ipTM=0.184 tol=5.6
2024-12-07 10:32:39,075 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=57.3 pTM=0.368 ipTM=0.18 tol=5.61
2024-12-07 10:33:19,920 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=57.4 pTM=0.371 ipTM=0.182 tol=5.46
2024-12-07 10:34:00,753 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=57.5 pTM=0.372 ipTM=0.198 tol=5.95
2024-12-07 10:34:00,754 alphafold2_multimer_v3_model_5_seed_000 took 1261.5s (30 recycles)
2024-12-07 10:34:01,951 reranking models by 'multimer' metric
2024-12-07 10:34:04,937 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 10:36:19,001 Relaxation took 137.0s
2024-12-07 10:36:19,001 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=59.5 pTM=0.411 ipTM=0.203
2024-12-07 10:40:25,136 Relaxation took 246.1s
2024-12-07 10:40:25,136 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=57.5 pTM=0.372 ipTM=0.198
2024-12-07 10:43:39,829 Relaxation took 194.7s
2024-12-07 10:43:39,829 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=58.1 pTM=0.363 ipTM=0.188
2024-12-07 10:45:50,957 Relaxation took 131.1s
2024-12-07 10:45:50,957 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=58.4 pTM=0.427 ipTM=0.168
2024-12-07 10:49:01,815 Relaxation took 190.9s
2024-12-07 10:49:01,816 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=60.6 pTM=0.41 ipTM=0.146
2024-12-07 10:49:04,837 Done