2024-12-07 09:04:01,083 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 09:04:01,400 Running on GPU
2024-12-07 09:04:04,919 Found 6 citations for tools or databases
2024-12-07 09:04:04,919 Query 1/1: NLE1_CNBP (length 662)
2024-12-07 09:04:05,199 Sleeping for 8s. Reason: PENDING
2024-12-07 09:04:13,469 Sleeping for 8s. Reason: RUNNING
2024-12-07 09:04:21,742 Sleeping for 5s. Reason: RUNNING
2024-12-07 09:04:27,000 Sleeping for 10s. Reason: RUNNING
2024-12-07 09:04:37,260 Sleeping for 5s. Reason: RUNNING
2024-12-07 09:04:42,511 Sleeping for 8s. Reason: RUNNING
2024-12-07 09:04:50,778 Sleeping for 10s. Reason: RUNNING
2024-12-07 09:05:01,041 Sleeping for 10s. Reason: RUNNING
2024-12-07 09:05:11,300 Sleeping for 8s. Reason: RUNNING
2024-12-07 09:05:19,565 Sleeping for 10s. Reason: RUNNING
2024-12-07 09:05:29,825 Sleeping for 9s. Reason: RUNNING
2024-12-07 09:05:39,089 Sleeping for 9s. Reason: RUNNING
2024-12-07 09:05:48,355 Sleeping for 10s. Reason: RUNNING
2024-12-07 09:05:58,613 Sleeping for 10s. Reason: RUNNING
2024-12-07 09:06:08,874 Sleeping for 8s. Reason: RUNNING
2024-12-07 09:06:17,133 Sleeping for 8s. Reason: RUNNING
2024-12-07 09:06:26,984 Sleeping for 8s. Reason: PENDING
2024-12-07 09:06:35,250 Sleeping for 6s. Reason: RUNNING
2024-12-07 09:06:41,513 Sleeping for 8s. Reason: RUNNING
2024-12-07 09:06:49,775 Sleeping for 7s. Reason: RUNNING
2024-12-07 09:06:57,029 Sleeping for 6s. Reason: RUNNING
2024-12-07 09:07:03,291 Sleeping for 10s. Reason: RUNNING
2024-12-07 09:07:13,555 Sleeping for 8s. Reason: RUNNING
2024-12-07 09:07:21,817 Sleeping for 5s. Reason: RUNNING
2024-12-07 09:07:27,077 Sleeping for 9s. Reason: RUNNING
2024-12-07 09:07:36,332 Sleeping for 7s. Reason: RUNNING
2024-12-07 09:07:46,745 Setting max_seq=508, max_extra_seq=2048
2024-12-07 09:10:27,811 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=68.1 pTM=0.629 ipTM=0.173
2024-12-07 09:10:36,806 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=71.2 pTM=0.65 ipTM=0.165 tol=7.59
2024-12-07 09:10:45,818 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=71.4 pTM=0.648 ipTM=0.159 tol=2.04
2024-12-07 09:10:54,809 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=71.1 pTM=0.65 ipTM=0.169 tol=1.63
2024-12-07 09:11:03,821 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=71.7 pTM=0.652 ipTM=0.169 tol=1.87
2024-12-07 09:11:12,850 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72.1 pTM=0.658 ipTM=0.178 tol=1.37
2024-12-07 09:11:21,897 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72.9 pTM=0.665 ipTM=0.185 tol=1.54
2024-12-07 09:11:30,944 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=72.8 pTM=0.665 ipTM=0.18 tol=1.75
2024-12-07 09:11:39,984 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.2 pTM=0.66 ipTM=0.183 tol=1.22
2024-12-07 09:11:49,030 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=72.4 pTM=0.662 ipTM=0.178 tol=1.14
2024-12-07 09:11:58,081 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=72.4 pTM=0.659 ipTM=0.183 tol=1.39
2024-12-07 09:12:07,119 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=71.9 pTM=0.655 ipTM=0.179 tol=1.73
2024-12-07 09:12:16,186 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.4 pTM=0.658 ipTM=0.178 tol=1.72
2024-12-07 09:12:25,241 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=72 pTM=0.657 ipTM=0.188 tol=1.79
2024-12-07 09:12:34,290 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=71.8 pTM=0.654 ipTM=0.177 tol=2.31
2024-12-07 09:12:43,346 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=71.8 pTM=0.656 ipTM=0.18 tol=1.62
2024-12-07 09:12:52,430 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=71.9 pTM=0.658 ipTM=0.173 tol=1.23
2024-12-07 09:13:01,558 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=71.7 pTM=0.659 ipTM=0.18 tol=1.02
2024-12-07 09:13:10,632 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=71.6 pTM=0.655 ipTM=0.175 tol=1.42
2024-12-07 09:13:19,709 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=71.6 pTM=0.656 ipTM=0.172 tol=1.7
2024-12-07 09:13:28,775 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=71.7 pTM=0.658 ipTM=0.177 tol=1.57
2024-12-07 09:13:37,816 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=71.8 pTM=0.656 ipTM=0.174 tol=1.63
2024-12-07 09:13:46,860 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=71.1 pTM=0.65 ipTM=0.174 tol=1.65
2024-12-07 09:13:55,916 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=71.9 pTM=0.656 ipTM=0.182 tol=1.41
2024-12-07 09:14:04,983 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=72 pTM=0.659 ipTM=0.174 tol=1.43
2024-12-07 09:14:14,031 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=71.6 pTM=0.655 ipTM=0.179 tol=1.81
2024-12-07 09:14:23,101 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=72 pTM=0.662 ipTM=0.172 tol=1.75
2024-12-07 09:14:32,167 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=72.1 pTM=0.657 ipTM=0.181 tol=1.55
2024-12-07 09:14:41,230 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=71.8 pTM=0.663 ipTM=0.176 tol=1.7
2024-12-07 09:14:50,292 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72.6 pTM=0.667 ipTM=0.182 tol=0.863
2024-12-07 09:14:59,348 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.1 pTM=0.666 ipTM=0.184 tol=1.02
2024-12-07 09:14:59,349 alphafold2_multimer_v3_model_1_seed_000 took 427.1s (30 recycles)
2024-12-07 09:15:08,720 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=72.5 pTM=0.66 ipTM=0.193
2024-12-07 09:15:17,829 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=74.4 pTM=0.669 ipTM=0.187 tol=5.85
2024-12-07 09:15:26,940 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=74.6 pTM=0.674 ipTM=0.179 tol=2.64
2024-12-07 09:15:36,059 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=75.1 pTM=0.688 ipTM=0.187 tol=1.52
2024-12-07 09:15:45,184 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=75.6 pTM=0.697 ipTM=0.205 tol=1.27
2024-12-07 09:15:54,324 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=75.8 pTM=0.701 ipTM=0.263 tol=1.6
2024-12-07 09:16:03,542 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=76 pTM=0.7 ipTM=0.192 tol=2.01
2024-12-07 09:16:12,707 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=75.7 pTM=0.701 ipTM=0.188 tol=2
2024-12-07 09:16:21,845 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=74.9 pTM=0.696 ipTM=0.185 tol=1.44
2024-12-07 09:16:30,982 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=75.1 pTM=0.698 ipTM=0.185 tol=1.53
2024-12-07 09:16:40,106 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=75.3 pTM=0.7 ipTM=0.188 tol=1.16
2024-12-07 09:16:49,223 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=75.4 pTM=0.702 ipTM=0.201 tol=1.84
2024-12-07 09:16:58,345 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=75.6 pTM=0.702 ipTM=0.194 tol=1.46
2024-12-07 09:17:07,449 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=75.2 pTM=0.701 ipTM=0.194 tol=1.44
2024-12-07 09:17:16,575 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=75.6 pTM=0.702 ipTM=0.205 tol=1.88
2024-12-07 09:17:25,679 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=75.1 pTM=0.7 ipTM=0.196 tol=1.21
2024-12-07 09:17:34,781 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=75.4 pTM=0.705 ipTM=0.201 tol=1.31
2024-12-07 09:17:43,897 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=75.9 pTM=0.71 ipTM=0.287 tol=1.92
2024-12-07 09:17:53,008 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=75.7 pTM=0.704 ipTM=0.218 tol=1.3
2024-12-07 09:18:02,107 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=75.4 pTM=0.704 ipTM=0.193 tol=2
2024-12-07 09:18:11,206 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=75.4 pTM=0.704 ipTM=0.208 tol=2.31
2024-12-07 09:18:20,305 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=75.2 pTM=0.703 ipTM=0.206 tol=2.13
2024-12-07 09:18:29,400 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=75.2 pTM=0.698 ipTM=0.2 tol=0.773
2024-12-07 09:18:38,504 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=75.1 pTM=0.704 ipTM=0.209 tol=1.29
2024-12-07 09:18:47,624 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=75.6 pTM=0.708 ipTM=0.237 tol=1.33
2024-12-07 09:18:56,727 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=74.4 pTM=0.696 ipTM=0.201 tol=1.53
2024-12-07 09:19:05,888 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=75.2 pTM=0.704 ipTM=0.202 tol=1.62
2024-12-07 09:19:15,028 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=74.9 pTM=0.697 ipTM=0.23 tol=1.8
2024-12-07 09:19:24,163 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=75.1 pTM=0.702 ipTM=0.204 tol=2
2024-12-07 09:19:33,286 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=75.4 pTM=0.709 ipTM=0.222 tol=1.65
2024-12-07 09:19:42,403 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=75.2 pTM=0.706 ipTM=0.213 tol=1.75
2024-12-07 09:19:42,403 alphafold2_multimer_v3_model_2_seed_000 took 282.8s (30 recycles)
2024-12-07 09:19:51,838 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=72.5 pTM=0.637 ipTM=0.222
2024-12-07 09:20:00,955 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=72.8 pTM=0.659 ipTM=0.218 tol=3.88
2024-12-07 09:20:10,084 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=72.7 pTM=0.658 ipTM=0.213 tol=2.27
2024-12-07 09:20:19,220 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=72.6 pTM=0.664 ipTM=0.231 tol=1.57
2024-12-07 09:20:28,335 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=72.6 pTM=0.668 ipTM=0.232 tol=1.85
2024-12-07 09:20:37,465 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=72.6 pTM=0.669 ipTM=0.233 tol=1.6
2024-12-07 09:20:46,605 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=72.8 pTM=0.681 ipTM=0.239 tol=1.06
2024-12-07 09:20:55,712 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=72.6 pTM=0.679 ipTM=0.234 tol=1.27
2024-12-07 09:21:04,842 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=72.5 pTM=0.677 ipTM=0.231 tol=1.14
2024-12-07 09:21:13,942 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=72.4 pTM=0.675 ipTM=0.233 tol=1.08
2024-12-07 09:21:23,036 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=72.6 pTM=0.681 ipTM=0.235 tol=0.812
2024-12-07 09:21:32,112 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=72.4 pTM=0.68 ipTM=0.234 tol=0.667
2024-12-07 09:21:41,208 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=72.8 pTM=0.685 ipTM=0.234 tol=1.01
2024-12-07 09:21:50,304 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=72.7 pTM=0.679 ipTM=0.235 tol=1.07
2024-12-07 09:21:59,392 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=72.6 pTM=0.683 ipTM=0.234 tol=0.853
2024-12-07 09:22:08,478 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=72.6 pTM=0.679 ipTM=0.238 tol=0.914
2024-12-07 09:22:17,572 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=72.6 pTM=0.683 ipTM=0.234 tol=0.943
2024-12-07 09:22:26,674 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=72.7 pTM=0.679 ipTM=0.237 tol=0.832
2024-12-07 09:22:35,781 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=72.7 pTM=0.679 ipTM=0.234 tol=0.869
2024-12-07 09:22:44,892 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=72.4 pTM=0.676 ipTM=0.229 tol=1.08
2024-12-07 09:22:53,994 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=72.6 pTM=0.676 ipTM=0.222 tol=1.95
2024-12-07 09:23:03,104 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=72.6 pTM=0.682 ipTM=0.237 tol=1.75
2024-12-07 09:23:12,206 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=72.7 pTM=0.677 ipTM=0.228 tol=1.72
2024-12-07 09:23:21,308 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=72.8 pTM=0.678 ipTM=0.232 tol=2.08
2024-12-07 09:23:30,396 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=72.7 pTM=0.676 ipTM=0.223 tol=2.14
2024-12-07 09:23:39,473 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=72.5 pTM=0.678 ipTM=0.244 tol=2.63
2024-12-07 09:23:48,569 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=72.7 pTM=0.679 ipTM=0.233 tol=1.97
2024-12-07 09:23:57,662 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=72.6 pTM=0.68 ipTM=0.246 tol=1.67
2024-12-07 09:24:06,751 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=72.3 pTM=0.675 ipTM=0.235 tol=1.61
2024-12-07 09:24:15,843 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=72.6 pTM=0.68 ipTM=0.238 tol=1.37
2024-12-07 09:24:24,918 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=72.5 pTM=0.681 ipTM=0.236 tol=1.64
2024-12-07 09:24:24,919 alphafold2_multimer_v3_model_3_seed_000 took 282.2s (30 recycles)
2024-12-07 09:24:34,300 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=71.4 pTM=0.629 ipTM=0.228
2024-12-07 09:24:43,393 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=72 pTM=0.637 ipTM=0.189 tol=4.74
2024-12-07 09:24:52,493 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=72 pTM=0.644 ipTM=0.205 tol=3.45
2024-12-07 09:25:01,599 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=72.6 pTM=0.646 ipTM=0.195 tol=2.63
2024-12-07 09:25:10,709 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=71.9 pTM=0.642 ipTM=0.195 tol=2.81
2024-12-07 09:25:19,796 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=71.9 pTM=0.638 ipTM=0.194 tol=3.95
2024-12-07 09:25:28,868 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71.7 pTM=0.644 ipTM=0.207 tol=2.55
2024-12-07 09:25:37,946 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=72 pTM=0.642 ipTM=0.201 tol=3.32
2024-12-07 09:25:47,009 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71.6 pTM=0.641 ipTM=0.206 tol=2.57
2024-12-07 09:25:56,080 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=71.5 pTM=0.639 ipTM=0.209 tol=2.83
2024-12-07 09:26:05,149 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=72 pTM=0.643 ipTM=0.203 tol=3.32
2024-12-07 09:26:14,222 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=71.6 pTM=0.642 ipTM=0.205 tol=3.01
2024-12-07 09:26:23,293 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=71.8 pTM=0.641 ipTM=0.2 tol=1.68
2024-12-07 09:26:32,370 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=71.6 pTM=0.64 ipTM=0.194 tol=1.9
2024-12-07 09:26:41,450 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=71.7 pTM=0.641 ipTM=0.197 tol=2.6
2024-12-07 09:26:50,544 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=71.7 pTM=0.645 ipTM=0.208 tol=3.77
2024-12-07 09:26:59,632 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=71.9 pTM=0.646 ipTM=0.207 tol=4.03
2024-12-07 09:27:08,711 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=71.9 pTM=0.643 ipTM=0.203 tol=3.38
2024-12-07 09:27:17,771 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=71.9 pTM=0.642 ipTM=0.198 tol=3.82
2024-12-07 09:27:26,837 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=71.7 pTM=0.642 ipTM=0.201 tol=3.18
2024-12-07 09:27:35,898 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=71.8 pTM=0.64 ipTM=0.188 tol=3.21
2024-12-07 09:27:44,966 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=72.1 pTM=0.644 ipTM=0.199 tol=2.13
2024-12-07 09:27:54,026 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=71.9 pTM=0.639 ipTM=0.195 tol=2.32
2024-12-07 09:28:03,101 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=72.1 pTM=0.644 ipTM=0.209 tol=3.32
2024-12-07 09:28:12,184 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=72.1 pTM=0.641 ipTM=0.193 tol=2.35
2024-12-07 09:28:21,306 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=71.2 pTM=0.637 ipTM=0.195 tol=3.59
2024-12-07 09:28:30,406 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=71.4 pTM=0.641 ipTM=0.2 tol=3.6
2024-12-07 09:28:39,484 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=71.4 pTM=0.641 ipTM=0.2 tol=2.78
2024-12-07 09:28:48,558 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=72.2 pTM=0.645 ipTM=0.197 tol=2.26
2024-12-07 09:28:57,673 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=71.9 pTM=0.646 ipTM=0.206 tol=2.24
2024-12-07 09:29:06,755 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=72.1 pTM=0.641 ipTM=0.191 tol=1.61
2024-12-07 09:29:06,755 alphafold2_multimer_v3_model_4_seed_000 took 281.6s (30 recycles)
2024-12-07 09:29:16,221 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=71.3 pTM=0.624 ipTM=0.203
2024-12-07 09:29:25,390 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=73 pTM=0.656 ipTM=0.177 tol=3.64
2024-12-07 09:29:34,532 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=72.5 pTM=0.64 ipTM=0.183 tol=3.22
2024-12-07 09:29:43,711 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=73.1 pTM=0.661 ipTM=0.198 tol=2.7
2024-12-07 09:29:52,874 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=72.6 pTM=0.659 ipTM=0.192 tol=4.14
2024-12-07 09:30:02,012 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=72.4 pTM=0.661 ipTM=0.202 tol=3
2024-12-07 09:30:11,166 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=72.8 pTM=0.671 ipTM=0.21 tol=1.21
2024-12-07 09:30:20,320 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=72.6 pTM=0.674 ipTM=0.213 tol=1.09
2024-12-07 09:30:29,458 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=72.6 pTM=0.672 ipTM=0.208 tol=1.56
2024-12-07 09:30:38,633 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=72.8 pTM=0.68 ipTM=0.218 tol=1.18
2024-12-07 09:30:47,780 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=72.9 pTM=0.68 ipTM=0.211 tol=0.992
2024-12-07 09:30:56,923 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=72.8 pTM=0.68 ipTM=0.205 tol=0.938
2024-12-07 09:31:06,080 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=73 pTM=0.682 ipTM=0.206 tol=0.78
2024-12-07 09:31:15,272 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=72.8 pTM=0.682 ipTM=0.214 tol=1.02
2024-12-07 09:31:24,423 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=72.8 pTM=0.684 ipTM=0.217 tol=1.34
2024-12-07 09:31:33,575 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=72.7 pTM=0.683 ipTM=0.214 tol=1.1
2024-12-07 09:31:42,727 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=72.9 pTM=0.688 ipTM=0.221 tol=0.878
2024-12-07 09:31:51,859 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=72.9 pTM=0.687 ipTM=0.218 tol=0.798
2024-12-07 09:32:01,020 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=72.9 pTM=0.686 ipTM=0.222 tol=0.803
2024-12-07 09:32:10,161 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=72.6 pTM=0.68 ipTM=0.207 tol=0.683
2024-12-07 09:32:19,311 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=72.8 pTM=0.689 ipTM=0.215 tol=0.986
2024-12-07 09:32:28,450 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=73.1 pTM=0.684 ipTM=0.212 tol=1.41
2024-12-07 09:32:37,603 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=72.8 pTM=0.686 ipTM=0.214 tol=1.33
2024-12-07 09:32:46,751 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=72.9 pTM=0.682 ipTM=0.21 tol=0.997
2024-12-07 09:32:55,899 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=72.9 pTM=0.685 ipTM=0.218 tol=1.1
2024-12-07 09:33:05,043 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=72.6 pTM=0.678 ipTM=0.213 tol=1.06
2024-12-07 09:33:14,186 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=72.9 pTM=0.69 ipTM=0.223 tol=1.27
2024-12-07 09:33:23,343 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=72.7 pTM=0.683 ipTM=0.218 tol=0.787
2024-12-07 09:33:32,493 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=72.8 pTM=0.682 ipTM=0.224 tol=1.19
2024-12-07 09:33:41,638 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=73.4 pTM=0.689 ipTM=0.216 tol=2.27
2024-12-07 09:33:50,792 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=73.1 pTM=0.683 ipTM=0.217 tol=2.28
2024-12-07 09:33:50,792 alphafold2_multimer_v3_model_5_seed_000 took 283.8s (30 recycles)
2024-12-07 09:33:51,073 reranking models by 'multimer' metric
2024-12-07 09:33:52,999 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 09:34:57,040 Relaxation took 66.0s
2024-12-07 09:34:57,040 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=72.5 pTM=0.681 ipTM=0.236
2024-12-07 09:35:44,492 Relaxation took 47.5s
2024-12-07 09:35:44,492 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=75.2 pTM=0.706 ipTM=0.213
2024-12-07 09:36:38,476 Relaxation took 54.0s
2024-12-07 09:36:38,476 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=73.1 pTM=0.683 ipTM=0.217
2024-12-07 09:37:25,966 Relaxation took 47.5s
2024-12-07 09:37:25,966 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=72.1 pTM=0.641 ipTM=0.191
2024-12-07 09:38:13,218 Relaxation took 47.3s
2024-12-07 09:38:13,218 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.1 pTM=0.666 ipTM=0.184
2024-12-07 09:38:14,459 Done