2024-12-07 09:46:17,102 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 09:46:17,417 Running on GPU
2024-12-07 09:46:20,892 Found 6 citations for tools or databases
2024-12-07 09:46:20,892 Query 1/1: NUP43_NUP160 (length 1816)
2024-12-07 09:46:21,161 Sleeping for 7s. Reason: PENDING
2024-12-07 09:46:28,419 Sleeping for 8s. Reason: RUNNING
2024-12-07 09:46:36,678 Sleeping for 5s. Reason: RUNNING
2024-12-07 09:46:41,936 Sleeping for 5s. Reason: RUNNING
2024-12-07 09:46:47,200 Sleeping for 9s. Reason: RUNNING
2024-12-07 09:46:56,456 Sleeping for 7s. Reason: RUNNING
2024-12-07 09:47:03,721 Sleeping for 9s. Reason: RUNNING
2024-12-07 09:47:12,995 Sleeping for 5s. Reason: RUNNING
2024-12-07 09:47:18,255 Sleeping for 7s. Reason: RUNNING
2024-12-07 09:47:25,523 Sleeping for 8s. Reason: RUNNING
2024-12-07 09:47:33,785 Sleeping for 6s. Reason: RUNNING
2024-12-07 09:47:40,037 Sleeping for 8s. Reason: RUNNING
2024-12-07 09:47:48,306 Sleeping for 9s. Reason: RUNNING
2024-12-07 09:47:57,565 Sleeping for 8s. Reason: RUNNING
2024-12-07 09:48:05,824 Sleeping for 7s. Reason: RUNNING
2024-12-07 09:48:13,087 Sleeping for 10s. Reason: RUNNING
2024-12-07 09:48:23,339 Sleeping for 7s. Reason: RUNNING
2024-12-07 09:48:30,591 Sleeping for 9s. Reason: RUNNING
2024-12-07 09:48:39,859 Sleeping for 9s. Reason: RUNNING
2024-12-07 09:48:49,267 Sleeping for 9s. Reason: RUNNING
2024-12-07 09:48:58,525 Sleeping for 8s. Reason: RUNNING
2024-12-07 09:49:06,779 Sleeping for 9s. Reason: RUNNING
2024-12-07 09:49:16,038 Sleeping for 7s. Reason: RUNNING
2024-12-07 09:49:24,598 Sleeping for 9s. Reason: PENDING
2024-12-07 09:49:33,869 Sleeping for 8s. Reason: RUNNING
2024-12-07 09:49:42,128 Sleeping for 9s. Reason: RUNNING
2024-12-07 09:49:51,392 Sleeping for 5s. Reason: RUNNING
2024-12-07 09:49:56,650 Sleeping for 6s. Reason: RUNNING
2024-12-07 09:50:02,911 Sleeping for 5s. Reason: RUNNING
2024-12-07 09:50:08,167 Sleeping for 9s. Reason: RUNNING
2024-12-07 09:50:17,433 Sleeping for 10s. Reason: RUNNING
2024-12-07 09:50:27,697 Sleeping for 5s. Reason: RUNNING
2024-12-07 09:50:32,947 Sleeping for 9s. Reason: RUNNING
2024-12-07 09:50:42,205 Sleeping for 7s. Reason: RUNNING
2024-12-07 09:50:49,457 Sleeping for 5s. Reason: RUNNING
2024-12-07 09:50:54,711 Sleeping for 8s. Reason: RUNNING
2024-12-07 09:51:02,973 Sleeping for 10s. Reason: RUNNING
2024-12-07 09:51:13,241 Sleeping for 10s. Reason: RUNNING
2024-12-07 09:51:23,510 Sleeping for 5s. Reason: RUNNING
2024-12-07 09:51:31,262 Setting max_seq=508, max_extra_seq=2048
2024-12-07 09:55:24,859 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=78.3 pTM=0.677 ipTM=0.29
2024-12-07 09:57:20,702 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=78.4 pTM=0.685 ipTM=0.277 tol=7.03
2024-12-07 09:59:16,527 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=78.3 pTM=0.675 ipTM=0.257 tol=2.3
2024-12-07 10:01:12,351 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=78.6 pTM=0.67 ipTM=0.253 tol=2.75
2024-12-07 10:03:08,181 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=78.6 pTM=0.673 ipTM=0.26 tol=2.25
2024-12-07 10:05:03,996 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=78.6 pTM=0.667 ipTM=0.243 tol=2.34
2024-12-07 10:06:59,790 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=78.4 pTM=0.67 ipTM=0.262 tol=1.82
2024-12-07 10:08:55,526 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=78.6 pTM=0.673 ipTM=0.288 tol=2.12
2024-12-07 10:10:51,303 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=78.9 pTM=0.677 ipTM=0.277 tol=1.64
2024-12-07 10:12:47,097 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=78.7 pTM=0.675 ipTM=0.273 tol=0.673
2024-12-07 10:14:42,900 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=78.8 pTM=0.674 ipTM=0.269 tol=0.658
2024-12-07 10:16:38,679 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=78.3 pTM=0.67 ipTM=0.272 tol=0.521
2024-12-07 10:18:34,444 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=78.5 pTM=0.67 ipTM=0.274 tol=1
2024-12-07 10:20:30,232 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=78.7 pTM=0.668 ipTM=0.26 tol=0.779
2024-12-07 10:22:25,992 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=78.4 pTM=0.671 ipTM=0.268 tol=0.629
2024-12-07 10:24:21,772 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=78.3 pTM=0.669 ipTM=0.26 tol=0.795
2024-12-07 10:26:17,547 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=78.4 pTM=0.664 ipTM=0.257 tol=1.18
2024-12-07 10:28:13,342 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=78.6 pTM=0.663 ipTM=0.24 tol=1.33
2024-12-07 10:30:09,164 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=78.4 pTM=0.662 ipTM=0.243 tol=0.938
2024-12-07 10:32:04,970 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=78.7 pTM=0.656 ipTM=0.228 tol=5.01
2024-12-07 10:34:00,806 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=78.9 pTM=0.659 ipTM=0.222 tol=2.46
2024-12-07 10:35:56,639 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=78.7 pTM=0.665 ipTM=0.243 tol=2.85
2024-12-07 10:37:52,442 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=78.8 pTM=0.666 ipTM=0.276 tol=2.35
2024-12-07 10:39:48,256 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=78.6 pTM=0.668 ipTM=0.258 tol=1.12
2024-12-07 10:41:44,071 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=78.6 pTM=0.666 ipTM=0.248 tol=2.95
2024-12-07 10:43:39,896 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=78.6 pTM=0.666 ipTM=0.248 tol=2.49
2024-12-07 10:45:35,728 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=78.8 pTM=0.665 ipTM=0.24 tol=2.26
2024-12-07 10:47:31,543 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=78.8 pTM=0.667 ipTM=0.251 tol=1.2
2024-12-07 10:49:27,381 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=78.7 pTM=0.659 ipTM=0.234 tol=3.53
2024-12-07 10:51:23,226 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=78.6 pTM=0.659 ipTM=0.234 tol=2.29
2024-12-07 10:53:19,090 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=78.7 pTM=0.665 ipTM=0.238 tol=2.23
2024-12-07 10:53:19,091 alphafold2_multimer_v3_model_1_seed_000 took 3704.3s (30 recycles)
2024-12-07 10:55:16,882 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=77.9 pTM=0.679 ipTM=0.333
2024-12-07 10:57:12,841 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=79.5 pTM=0.679 ipTM=0.289 tol=9.07
2024-12-07 10:59:08,752 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=79.5 pTM=0.677 ipTM=0.318 tol=5.41
2024-12-07 11:01:04,640 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=80.1 pTM=0.68 ipTM=0.295 tol=3.38
2024-12-07 11:03:00,462 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=80.2 pTM=0.683 ipTM=0.308 tol=2.16
2024-12-07 11:04:56,256 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=80.6 pTM=0.681 ipTM=0.297 tol=1.47
2024-12-07 11:06:52,096 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=80.2 pTM=0.681 ipTM=0.305 tol=1.24
2024-12-07 11:08:47,904 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=80.2 pTM=0.68 ipTM=0.312 tol=0.815
2024-12-07 11:10:43,785 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=80.4 pTM=0.678 ipTM=0.288 tol=0.874
2024-12-07 11:12:39,658 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=80.3 pTM=0.676 ipTM=0.304 tol=1.02
2024-12-07 11:14:35,508 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=80.6 pTM=0.687 ipTM=0.354 tol=1.16
2024-12-07 11:16:31,343 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=80.6 pTM=0.686 ipTM=0.325 tol=1.4
2024-12-07 11:18:27,240 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=80.3 pTM=0.67 ipTM=0.271 tol=2.66
2024-12-07 11:20:23,077 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=80.6 pTM=0.682 ipTM=0.365 tol=1.72
2024-12-07 11:22:18,908 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=80.7 pTM=0.693 ipTM=0.351 tol=2.29
2024-12-07 11:24:14,716 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=80.4 pTM=0.687 ipTM=0.338 tol=1.24
2024-12-07 11:26:10,546 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=80.4 pTM=0.682 ipTM=0.32 tol=0.736
2024-12-07 11:28:06,404 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=80.3 pTM=0.677 ipTM=0.288 tol=1.4
2024-12-07 11:30:02,309 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=80.5 pTM=0.677 ipTM=0.286 tol=0.806
2024-12-07 11:31:58,159 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=80.5 pTM=0.68 ipTM=0.306 tol=1.08
2024-12-07 11:33:53,956 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=80.6 pTM=0.69 ipTM=0.343 tol=1.14
2024-12-07 11:35:49,806 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=80.2 pTM=0.681 ipTM=0.301 tol=1.54
2024-12-07 11:37:45,700 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=80.4 pTM=0.675 ipTM=0.287 tol=2.25
2024-12-07 11:39:41,514 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=80.4 pTM=0.687 ipTM=0.341 tol=2.34
2024-12-07 11:41:37,322 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=80.6 pTM=0.692 ipTM=0.358 tol=1.33
2024-12-07 11:43:33,153 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=80.2 pTM=0.684 ipTM=0.316 tol=1.19
2024-12-07 11:45:29,008 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=80.5 pTM=0.681 ipTM=0.301 tol=1.83
2024-12-07 11:47:24,834 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=80.4 pTM=0.682 ipTM=0.302 tol=0.532
2024-12-07 11:49:20,766 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=80.2 pTM=0.667 ipTM=0.251 tol=3.02
2024-12-07 11:51:16,714 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=80.1 pTM=0.668 ipTM=0.253 tol=1.81
2024-12-07 11:53:12,703 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=80 pTM=0.663 ipTM=0.24 tol=2.56
2024-12-07 11:53:12,705 alphafold2_multimer_v3_model_2_seed_000 took 3591.7s (30 recycles)
2024-12-07 11:55:10,671 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=78.6 pTM=0.657 ipTM=0.238
2024-12-07 11:57:06,634 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=80.4 pTM=0.677 ipTM=0.306 tol=9.55
2024-12-07 11:59:02,553 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=80.1 pTM=0.678 ipTM=0.271 tol=4.34
2024-12-07 12:00:58,477 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=80.2 pTM=0.683 ipTM=0.278 tol=1.78
2024-12-07 12:02:54,365 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=80.2 pTM=0.682 ipTM=0.286 tol=0.931
2024-12-07 12:04:50,297 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=80.3 pTM=0.685 ipTM=0.269 tol=2.04
2024-12-07 12:06:46,248 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=80.1 pTM=0.68 ipTM=0.263 tol=1.1
2024-12-07 12:08:42,136 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=80 pTM=0.678 ipTM=0.26 tol=1.46
2024-12-07 12:10:38,090 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=80.2 pTM=0.684 ipTM=0.268 tol=1.33
2024-12-07 12:12:33,994 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=80.1 pTM=0.682 ipTM=0.264 tol=1.56
2024-12-07 12:14:29,974 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=80.1 pTM=0.684 ipTM=0.266 tol=0.926
2024-12-07 12:16:25,897 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=80.1 pTM=0.681 ipTM=0.264 tol=0.772
2024-12-07 12:18:21,855 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=79.8 pTM=0.68 ipTM=0.259 tol=1.64
2024-12-07 12:20:17,821 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=80.1 pTM=0.682 ipTM=0.259 tol=2.25
2024-12-07 12:22:13,790 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=80.1 pTM=0.683 ipTM=0.257 tol=1.65
2024-12-07 12:24:09,659 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=79.9 pTM=0.678 ipTM=0.26 tol=1.75
2024-12-07 12:26:05,603 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=80 pTM=0.678 ipTM=0.253 tol=0.805
2024-12-07 12:28:01,546 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=80 pTM=0.677 ipTM=0.247 tol=1.37
2024-12-07 12:29:57,494 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=80 pTM=0.678 ipTM=0.254 tol=2.87
2024-12-07 12:31:53,427 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=79.8 pTM=0.675 ipTM=0.247 tol=1.8
2024-12-07 12:33:49,370 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=79.8 pTM=0.676 ipTM=0.253 tol=1.34
2024-12-07 12:35:45,352 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=80.1 pTM=0.684 ipTM=0.257 tol=1.1
2024-12-07 12:37:41,295 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=79.9 pTM=0.679 ipTM=0.259 tol=2.65
2024-12-07 12:39:37,223 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=80.1 pTM=0.679 ipTM=0.25 tol=3.09
2024-12-07 12:41:33,195 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=80.1 pTM=0.682 ipTM=0.259 tol=2.45
2024-12-07 12:43:29,116 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=79.9 pTM=0.679 ipTM=0.251 tol=1.63
2024-12-07 12:45:25,037 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=79.9 pTM=0.68 ipTM=0.261 tol=1.32
2024-12-07 12:47:20,945 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=80 pTM=0.68 ipTM=0.254 tol=3.08
2024-12-07 12:49:16,932 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=79.9 pTM=0.675 ipTM=0.249 tol=2.78
2024-12-07 12:51:12,881 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=79.9 pTM=0.669 ipTM=0.23 tol=4.22
2024-12-07 12:53:08,826 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=79.8 pTM=0.672 ipTM=0.244 tol=2.76
2024-12-07 12:53:08,827 alphafold2_multimer_v3_model_3_seed_000 took 3594.2s (30 recycles)
2024-12-07 12:55:06,619 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=77.1 pTM=0.682 ipTM=0.308
2024-12-07 12:57:02,519 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=78.4 pTM=0.683 ipTM=0.276 tol=8.02
2024-12-07 12:58:58,407 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=78.6 pTM=0.682 ipTM=0.272 tol=3.26
2024-12-07 13:00:54,326 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=78.8 pTM=0.677 ipTM=0.264 tol=2.78
2024-12-07 13:02:50,184 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=79.4 pTM=0.673 ipTM=0.258 tol=10.6
2024-12-07 13:04:46,046 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=80 pTM=0.682 ipTM=0.287 tol=5.34
2024-12-07 13:06:41,935 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=79.7 pTM=0.679 ipTM=0.28 tol=1.76
2024-12-07 13:08:37,804 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=79.8 pTM=0.681 ipTM=0.311 tol=1.09
2024-12-07 13:10:33,729 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=79.9 pTM=0.68 ipTM=0.286 tol=0.784
2024-12-07 13:12:29,591 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=79.5 pTM=0.678 ipTM=0.314 tol=1.33
2024-12-07 13:14:25,499 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=79.9 pTM=0.678 ipTM=0.269 tol=1.76
2024-12-07 13:16:21,443 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=79.2 pTM=0.67 ipTM=0.224 tol=10.5
2024-12-07 13:18:17,323 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=79.2 pTM=0.676 ipTM=0.315 tol=5.22
2024-12-07 13:20:13,136 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=79.2 pTM=0.677 ipTM=0.357 tol=2.3
2024-12-07 13:22:08,938 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=79.2 pTM=0.676 ipTM=0.292 tol=0.911
2024-12-07 13:24:04,751 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=79 pTM=0.671 ipTM=0.256 tol=3.29
2024-12-07 13:26:00,538 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=79.7 pTM=0.675 ipTM=0.275 tol=9.77
2024-12-07 13:27:56,381 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=79.9 pTM=0.678 ipTM=0.276 tol=3.48
2024-12-07 13:29:52,265 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=80 pTM=0.683 ipTM=0.319 tol=1.78
2024-12-07 13:31:48,139 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=80 pTM=0.683 ipTM=0.295 tol=1.24
2024-12-07 13:33:43,985 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=79.9 pTM=0.684 ipTM=0.335 tol=2.15
2024-12-07 13:35:39,839 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=80.1 pTM=0.682 ipTM=0.285 tol=2.54
2024-12-07 13:37:35,797 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=79.3 pTM=0.671 ipTM=0.221 tol=7.99
2024-12-07 13:39:31,728 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=78.9 pTM=0.677 ipTM=0.249 tol=6.31
2024-12-07 13:41:27,589 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=79.1 pTM=0.681 ipTM=0.268 tol=2.12
2024-12-07 13:43:23,466 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=79.1 pTM=0.684 ipTM=0.282 tol=2.76
2024-12-07 13:45:19,329 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=79.1 pTM=0.683 ipTM=0.281 tol=1.85
2024-12-07 13:47:15,216 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=78.9 pTM=0.686 ipTM=0.281 tol=1.51
2024-12-07 13:49:11,087 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=79.1 pTM=0.687 ipTM=0.279 tol=3.02
2024-12-07 13:51:06,970 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=78.9 pTM=0.686 ipTM=0.278 tol=2.47
2024-12-07 13:53:02,805 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=78.8 pTM=0.685 ipTM=0.282 tol=1.1
2024-12-07 13:53:02,807 alphafold2_multimer_v3_model_4_seed_000 took 3592.1s (30 recycles)
2024-12-07 13:55:00,587 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=77.9 pTM=0.659 ipTM=0.251
2024-12-07 13:56:56,555 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=79.2 pTM=0.664 ipTM=0.235 tol=7.44
2024-12-07 13:58:52,505 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=79.4 pTM=0.67 ipTM=0.228 tol=5.54
2024-12-07 14:00:48,513 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=79.7 pTM=0.669 ipTM=0.211 tol=3.02
2024-12-07 14:02:44,531 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=79.8 pTM=0.67 ipTM=0.213 tol=2.44
2024-12-07 14:04:40,558 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=80 pTM=0.668 ipTM=0.205 tol=2.89
2024-12-07 14:06:36,573 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=79.9 pTM=0.667 ipTM=0.206 tol=2.03
2024-12-07 14:08:32,555 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=79.9 pTM=0.663 ipTM=0.205 tol=1.18
2024-12-07 14:10:28,542 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=80.1 pTM=0.671 ipTM=0.211 tol=2.64
2024-12-07 14:12:24,534 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=79.9 pTM=0.663 ipTM=0.205 tol=1.74
2024-12-07 14:14:20,556 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=80.1 pTM=0.664 ipTM=0.203 tol=2.25
2024-12-07 14:16:16,528 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=80 pTM=0.662 ipTM=0.204 tol=1.24
2024-12-07 14:18:12,489 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=79.9 pTM=0.661 ipTM=0.203 tol=1.5
2024-12-07 14:20:08,457 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=79.8 pTM=0.66 ipTM=0.201 tol=1.66
2024-12-07 14:22:04,361 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=79.9 pTM=0.667 ipTM=0.209 tol=1.15
2024-12-07 14:24:00,273 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=79.9 pTM=0.664 ipTM=0.207 tol=0.685
2024-12-07 14:25:56,229 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=79.8 pTM=0.663 ipTM=0.207 tol=0.987
2024-12-07 14:27:52,124 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=79.9 pTM=0.663 ipTM=0.21 tol=1.07
2024-12-07 14:29:48,050 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=79.9 pTM=0.662 ipTM=0.208 tol=0.994
2024-12-07 14:31:44,027 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=79.9 pTM=0.663 ipTM=0.208 tol=0.74
2024-12-07 14:33:40,017 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=79.9 pTM=0.662 ipTM=0.207 tol=1.19
2024-12-07 14:35:35,963 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=80.1 pTM=0.668 ipTM=0.209 tol=1.61
2024-12-07 14:37:31,929 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=79.8 pTM=0.663 ipTM=0.202 tol=1.91
2024-12-07 14:39:27,924 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=79.9 pTM=0.664 ipTM=0.208 tol=6.74
2024-12-07 14:41:23,883 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=79.9 pTM=0.661 ipTM=0.211 tol=3.24
2024-12-07 14:43:19,865 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=79.9 pTM=0.66 ipTM=0.204 tol=1.59
2024-12-07 14:45:15,882 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=80.1 pTM=0.657 ipTM=0.195 tol=4.16
2024-12-07 14:47:11,889 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=80.1 pTM=0.659 ipTM=0.2 tol=1.04
2024-12-07 14:49:07,880 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=80.1 pTM=0.662 ipTM=0.2 tol=1.06
2024-12-07 14:51:03,863 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=80 pTM=0.658 ipTM=0.201 tol=1.49
2024-12-07 14:52:59,862 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=80.1 pTM=0.657 ipTM=0.203 tol=2.84
2024-12-07 14:52:59,864 alphafold2_multimer_v3_model_5_seed_000 took 3595.2s (30 recycles)
2024-12-07 14:53:01,769 reranking models by 'multimer' metric
2024-12-07 14:53:03,555 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 14:56:18,524 Relaxation took 196.8s
2024-12-07 14:56:18,524 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=78.8 pTM=0.685 ipTM=0.282
2024-12-07 15:01:26,961 Relaxation took 308.4s
2024-12-07 15:01:26,961 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=79.8 pTM=0.672 ipTM=0.244
2024-12-07 15:04:04,474 Relaxation took 157.5s
2024-12-07 15:04:04,474 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=80 pTM=0.663 ipTM=0.24
2024-12-07 15:06:57,454 Relaxation took 173.0s
2024-12-07 15:06:57,454 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=78.7 pTM=0.665 ipTM=0.238
2024-12-07 15:08:28,223 Relaxation took 90.8s
2024-12-07 15:08:28,223 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=80.1 pTM=0.657 ipTM=0.203
2024-12-07 15:08:32,753 Done