2024-12-07 10:09:59,156 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 10:09:59,465 Running on GPU
2024-12-07 10:10:02,906 Found 6 citations for tools or databases
2024-12-07 10:10:02,906 Query 1/1: OSTM1_STK39 (length 879)
2024-12-07 10:10:03,376 Sleeping for 8s. Reason: PENDING
2024-12-07 10:10:11,633 Sleeping for 8s. Reason: RUNNING
2024-12-07 10:10:19,893 Sleeping for 6s. Reason: RUNNING
2024-12-07 10:10:26,148 Sleeping for 10s. Reason: RUNNING
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2024-12-07 10:10:42,670 Sleeping for 7s. Reason: RUNNING
2024-12-07 10:10:49,928 Sleeping for 5s. Reason: RUNNING
2024-12-07 10:10:55,182 Sleeping for 5s. Reason: RUNNING
2024-12-07 10:11:00,437 Sleeping for 7s. Reason: RUNNING
2024-12-07 10:11:07,703 Sleeping for 10s. Reason: RUNNING
2024-12-07 10:11:17,970 Sleeping for 5s. Reason: RUNNING
2024-12-07 10:11:23,226 Sleeping for 8s. Reason: RUNNING
2024-12-07 10:11:31,481 Sleeping for 6s. Reason: RUNNING
2024-12-07 10:11:37,733 Sleeping for 7s. Reason: RUNNING
2024-12-07 10:11:44,990 Sleeping for 6s. Reason: RUNNING
2024-12-07 10:11:51,242 Sleeping for 5s. Reason: RUNNING
2024-12-07 10:11:56,497 Sleeping for 6s. Reason: RUNNING
2024-12-07 10:12:02,750 Sleeping for 6s. Reason: RUNNING
2024-12-07 10:12:09,014 Sleeping for 8s. Reason: RUNNING
2024-12-07 10:12:17,275 Sleeping for 8s. Reason: RUNNING
2024-12-07 10:12:25,530 Sleeping for 5s. Reason: RUNNING
2024-12-07 10:12:30,785 Sleeping for 9s. Reason: RUNNING
2024-12-07 10:12:40,042 Sleeping for 5s. Reason: RUNNING
2024-12-07 10:12:47,295 Sleeping for 10s. Reason: PENDING
2024-12-07 10:12:57,550 Sleeping for 8s. Reason: RUNNING
2024-12-07 10:13:05,812 Sleeping for 10s. Reason: RUNNING
2024-12-07 10:13:16,067 Sleeping for 5s. Reason: RUNNING
2024-12-07 10:13:21,336 Sleeping for 9s. Reason: RUNNING
2024-12-07 10:13:30,592 Sleeping for 10s. Reason: RUNNING
2024-12-07 10:13:40,850 Sleeping for 5s. Reason: RUNNING
2024-12-07 10:13:46,114 Sleeping for 6s. Reason: RUNNING
2024-12-07 10:13:52,364 Sleeping for 10s. Reason: RUNNING
2024-12-07 10:14:02,622 Sleeping for 10s. Reason: RUNNING
2024-12-07 10:14:12,881 Sleeping for 10s. Reason: RUNNING
2024-12-07 10:14:23,137 Sleeping for 8s. Reason: RUNNING
2024-12-07 10:14:31,391 Sleeping for 10s. Reason: RUNNING
2024-12-07 10:14:41,652 Sleeping for 9s. Reason: RUNNING
2024-12-07 10:14:54,170 Setting max_seq=508, max_extra_seq=2048
2024-12-07 10:17:45,865 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.1 pTM=0.414 ipTM=0.134
2024-12-07 10:18:01,756 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.3 pTM=0.41 ipTM=0.135 tol=10.8
2024-12-07 10:18:17,700 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.8 pTM=0.411 ipTM=0.14 tol=7.39
2024-12-07 10:18:33,680 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.4 pTM=0.411 ipTM=0.298 tol=6.11
2024-12-07 10:18:49,680 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=65.1 pTM=0.415 ipTM=0.418 tol=4.95
2024-12-07 10:19:05,721 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=65.2 pTM=0.41 ipTM=0.416 tol=3.85
2024-12-07 10:19:21,789 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=65.3 pTM=0.411 ipTM=0.409 tol=2.67
2024-12-07 10:19:37,867 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=65.1 pTM=0.409 ipTM=0.406 tol=3.03
2024-12-07 10:19:53,959 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=65.1 pTM=0.41 ipTM=0.41 tol=3.88
2024-12-07 10:20:10,058 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=65.2 pTM=0.409 ipTM=0.412 tol=3.1
2024-12-07 10:20:26,153 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=65 pTM=0.406 ipTM=0.417 tol=1.87
2024-12-07 10:20:42,254 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=65.1 pTM=0.407 ipTM=0.405 tol=2.92
2024-12-07 10:20:58,355 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.9 pTM=0.408 ipTM=0.401 tol=3.28
2024-12-07 10:21:14,455 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.9 pTM=0.409 ipTM=0.402 tol=4.68
2024-12-07 10:21:30,555 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=65 pTM=0.41 ipTM=0.418 tol=4.05
2024-12-07 10:21:46,648 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=64.9 pTM=0.409 ipTM=0.395 tol=2.96
2024-12-07 10:22:02,736 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=65.2 pTM=0.412 ipTM=0.402 tol=3.29
2024-12-07 10:22:18,820 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.8 pTM=0.407 ipTM=0.409 tol=3.29
2024-12-07 10:22:34,896 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=65.1 pTM=0.41 ipTM=0.417 tol=1.95
2024-12-07 10:22:50,975 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=65.1 pTM=0.411 ipTM=0.407 tol=1.76
2024-12-07 10:23:07,050 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.3 pTM=0.41 ipTM=0.42 tol=9.06
2024-12-07 10:23:23,147 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=65.1 pTM=0.411 ipTM=0.412 tol=7.42
2024-12-07 10:23:39,231 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.9 pTM=0.411 ipTM=0.41 tol=3.19
2024-12-07 10:23:55,336 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=64.9 pTM=0.41 ipTM=0.404 tol=2.05
2024-12-07 10:24:11,435 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=65.1 pTM=0.413 ipTM=0.412 tol=1.51
2024-12-07 10:24:27,522 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.9 pTM=0.411 ipTM=0.402 tol=1.64
2024-12-07 10:24:43,607 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=65.1 pTM=0.414 ipTM=0.406 tol=1.72
2024-12-07 10:24:59,690 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.9 pTM=0.411 ipTM=0.408 tol=2.48
2024-12-07 10:25:15,779 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=65.1 pTM=0.411 ipTM=0.412 tol=2.02
2024-12-07 10:25:31,863 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.9 pTM=0.408 ipTM=0.404 tol=1.69
2024-12-07 10:25:47,950 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=64.9 pTM=0.407 ipTM=0.407 tol=1.06
2024-12-07 10:25:47,951 alphafold2_multimer_v3_model_1_seed_000 took 648.4s (30 recycles)
2024-12-07 10:26:04,567 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65 pTM=0.412 ipTM=0.137
2024-12-07 10:26:20,690 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65.8 pTM=0.409 ipTM=0.133 tol=8.97
2024-12-07 10:26:36,838 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.4 pTM=0.414 ipTM=0.141 tol=8.49
2024-12-07 10:26:52,979 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=65.9 pTM=0.411 ipTM=0.139 tol=5.23
2024-12-07 10:27:09,122 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=65.9 pTM=0.413 ipTM=0.136 tol=4.3
2024-12-07 10:27:25,274 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=66.2 pTM=0.416 ipTM=0.133 tol=3.64
2024-12-07 10:27:41,438 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66.4 pTM=0.421 ipTM=0.136 tol=4.44
2024-12-07 10:27:57,585 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=66.1 pTM=0.419 ipTM=0.139 tol=3.79
2024-12-07 10:28:13,739 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66.1 pTM=0.421 ipTM=0.135 tol=2.3
2024-12-07 10:28:29,878 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=65.9 pTM=0.419 ipTM=0.14 tol=1.82
2024-12-07 10:28:46,024 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66.1 pTM=0.421 ipTM=0.138 tol=1.38
2024-12-07 10:29:02,166 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=66 pTM=0.421 ipTM=0.138 tol=1.18
2024-12-07 10:29:18,312 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.1 pTM=0.422 ipTM=0.141 tol=0.988
2024-12-07 10:29:34,465 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66.1 pTM=0.422 ipTM=0.145 tol=0.907
2024-12-07 10:29:50,613 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.3 pTM=0.423 ipTM=0.143 tol=1.27
2024-12-07 10:30:06,763 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.1 pTM=0.421 ipTM=0.145 tol=1.08
2024-12-07 10:30:22,909 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66.1 pTM=0.422 ipTM=0.143 tol=1.15
2024-12-07 10:30:39,057 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=66.1 pTM=0.421 ipTM=0.144 tol=0.741
2024-12-07 10:30:55,209 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=65.9 pTM=0.419 ipTM=0.141 tol=0.809
2024-12-07 10:31:11,349 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66.1 pTM=0.421 ipTM=0.146 tol=1.69
2024-12-07 10:31:27,505 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=65.9 pTM=0.42 ipTM=0.146 tol=1.15
2024-12-07 10:31:43,666 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65.9 pTM=0.42 ipTM=0.143 tol=1.16
2024-12-07 10:31:59,818 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=66 pTM=0.422 ipTM=0.141 tol=0.902
2024-12-07 10:32:15,958 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=66.1 pTM=0.421 ipTM=0.138 tol=1.09
2024-12-07 10:32:32,100 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65.9 pTM=0.42 ipTM=0.138 tol=0.792
2024-12-07 10:32:48,252 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65.8 pTM=0.419 ipTM=0.142 tol=1.19
2024-12-07 10:33:04,405 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66 pTM=0.419 ipTM=0.138 tol=0.935
2024-12-07 10:33:20,567 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=66 pTM=0.422 ipTM=0.146 tol=0.965
2024-12-07 10:33:36,715 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.8 pTM=0.42 ipTM=0.144 tol=1.33
2024-12-07 10:33:52,866 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.8 pTM=0.417 ipTM=0.14 tol=1.21
2024-12-07 10:34:09,016 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.5 pTM=0.417 ipTM=0.137 tol=1.37
2024-12-07 10:34:09,016 alphafold2_multimer_v3_model_2_seed_000 took 500.6s (30 recycles)
2024-12-07 10:34:25,713 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=63.6 pTM=0.409 ipTM=0.123
2024-12-07 10:34:41,922 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63.7 pTM=0.42 ipTM=0.138 tol=11.6
2024-12-07 10:34:58,127 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=62.6 pTM=0.417 ipTM=0.145 tol=7.36
2024-12-07 10:35:14,346 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=62.4 pTM=0.414 ipTM=0.143 tol=3.62
2024-12-07 10:35:30,581 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.8 pTM=0.42 ipTM=0.149 tol=3.88
2024-12-07 10:35:46,816 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63 pTM=0.42 ipTM=0.149 tol=2.07
2024-12-07 10:36:03,047 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=62.8 pTM=0.416 ipTM=0.145 tol=2.02
2024-12-07 10:36:19,284 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.8 pTM=0.42 ipTM=0.152 tol=2.67
2024-12-07 10:36:35,521 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=62.5 pTM=0.415 ipTM=0.148 tol=1.46
2024-12-07 10:36:51,748 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62.2 pTM=0.413 ipTM=0.147 tol=1.65
2024-12-07 10:37:07,984 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=62.5 pTM=0.415 ipTM=0.148 tol=1.09
2024-12-07 10:37:24,212 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.3 pTM=0.413 ipTM=0.149 tol=1.38
2024-12-07 10:37:40,443 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.4 pTM=0.413 ipTM=0.147 tol=2.22
2024-12-07 10:37:56,668 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.6 pTM=0.415 ipTM=0.148 tol=2.21
2024-12-07 10:38:12,905 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=62.4 pTM=0.415 ipTM=0.149 tol=1.18
2024-12-07 10:38:29,137 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.5 pTM=0.414 ipTM=0.148 tol=1.48
2024-12-07 10:38:45,369 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=62.7 pTM=0.416 ipTM=0.149 tol=1.02
2024-12-07 10:39:01,599 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=62.6 pTM=0.415 ipTM=0.15 tol=1.21
2024-12-07 10:39:17,814 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=62.5 pTM=0.415 ipTM=0.151 tol=1.31
2024-12-07 10:39:34,048 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63 pTM=0.417 ipTM=0.15 tol=1.05
2024-12-07 10:39:50,273 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=62.6 pTM=0.417 ipTM=0.151 tol=1.85
2024-12-07 10:40:06,499 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=62.6 pTM=0.414 ipTM=0.147 tol=1.95
2024-12-07 10:40:22,723 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=62.3 pTM=0.415 ipTM=0.15 tol=1.36
2024-12-07 10:40:38,952 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=62.9 pTM=0.417 ipTM=0.15 tol=1.43
2024-12-07 10:40:55,183 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=62.5 pTM=0.414 ipTM=0.149 tol=1.24
2024-12-07 10:41:11,417 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=62.7 pTM=0.416 ipTM=0.149 tol=1.14
2024-12-07 10:41:27,640 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62.7 pTM=0.416 ipTM=0.15 tol=1.49
2024-12-07 10:41:43,870 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62.5 pTM=0.416 ipTM=0.151 tol=1.32
2024-12-07 10:42:00,085 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=62.5 pTM=0.413 ipTM=0.149 tol=1.78
2024-12-07 10:42:16,309 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=62.8 pTM=0.417 ipTM=0.149 tol=1.7
2024-12-07 10:42:32,532 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=62.3 pTM=0.414 ipTM=0.15 tol=1.42
2024-12-07 10:42:32,533 alphafold2_multimer_v3_model_3_seed_000 took 503.0s (30 recycles)
2024-12-07 10:42:49,209 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=63.4 pTM=0.407 ipTM=0.169
2024-12-07 10:43:05,409 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=63.4 pTM=0.423 ipTM=0.159 tol=15.5
2024-12-07 10:43:21,611 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=62.5 pTM=0.422 ipTM=0.164 tol=9.07
2024-12-07 10:43:37,805 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=61.8 pTM=0.418 ipTM=0.165 tol=6.97
2024-12-07 10:43:53,993 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=61.6 pTM=0.417 ipTM=0.162 tol=5.45
2024-12-07 10:44:10,195 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=61.4 pTM=0.415 ipTM=0.162 tol=4.48
2024-12-07 10:44:26,421 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=61.1 pTM=0.414 ipTM=0.164 tol=4.65
2024-12-07 10:44:42,630 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=61.2 pTM=0.415 ipTM=0.163 tol=4.08
2024-12-07 10:44:58,834 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=61.1 pTM=0.414 ipTM=0.163 tol=4.02
2024-12-07 10:45:15,035 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60.8 pTM=0.413 ipTM=0.164 tol=3.11
2024-12-07 10:45:31,255 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=61 pTM=0.412 ipTM=0.159 tol=4.36
2024-12-07 10:45:47,446 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60.6 pTM=0.413 ipTM=0.164 tol=3.68
2024-12-07 10:46:03,649 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60.9 pTM=0.411 ipTM=0.16 tol=3.25
2024-12-07 10:46:19,863 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=60.6 pTM=0.411 ipTM=0.161 tol=3.66
2024-12-07 10:46:36,079 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=61 pTM=0.412 ipTM=0.161 tol=2.59
2024-12-07 10:46:52,296 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=61 pTM=0.414 ipTM=0.163 tol=3.24
2024-12-07 10:47:08,514 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=61 pTM=0.412 ipTM=0.161 tol=2.36
2024-12-07 10:47:24,718 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60.8 pTM=0.412 ipTM=0.16 tol=4.76
2024-12-07 10:47:40,930 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=60.8 pTM=0.415 ipTM=0.161 tol=3.69
2024-12-07 10:47:57,134 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=61 pTM=0.414 ipTM=0.156 tol=4.19
2024-12-07 10:48:13,328 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=61.6 pTM=0.417 ipTM=0.15 tol=3.72
2024-12-07 10:48:29,526 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60.8 pTM=0.412 ipTM=0.151 tol=3.01
2024-12-07 10:48:45,734 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=61.1 pTM=0.414 ipTM=0.151 tol=2.09
2024-12-07 10:49:01,946 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=61.8 pTM=0.419 ipTM=0.152 tol=4.21
2024-12-07 10:49:18,160 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=61.1 pTM=0.413 ipTM=0.15 tol=2.73
2024-12-07 10:49:34,364 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=61.4 pTM=0.419 ipTM=0.153 tol=2.35
2024-12-07 10:49:50,570 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=61.8 pTM=0.419 ipTM=0.15 tol=3.74
2024-12-07 10:50:06,768 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=61.3 pTM=0.416 ipTM=0.151 tol=3.99
2024-12-07 10:50:22,969 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=61.3 pTM=0.415 ipTM=0.151 tol=4.04
2024-12-07 10:50:39,168 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=61.5 pTM=0.416 ipTM=0.15 tol=2.11
2024-12-07 10:50:55,360 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=61.2 pTM=0.417 ipTM=0.152 tol=4.29
2024-12-07 10:50:55,360 alphafold2_multimer_v3_model_4_seed_000 took 502.3s (30 recycles)
2024-12-07 10:51:12,080 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63 pTM=0.405 ipTM=0.122
2024-12-07 10:51:28,300 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=63.8 pTM=0.41 ipTM=0.123 tol=9.92
2024-12-07 10:51:44,540 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=62.8 pTM=0.413 ipTM=0.137 tol=9.83
2024-12-07 10:52:00,779 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=62.7 pTM=0.42 ipTM=0.145 tol=5.85
2024-12-07 10:52:16,998 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=62.1 pTM=0.415 ipTM=0.146 tol=5.84
2024-12-07 10:52:33,235 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.8 pTM=0.413 ipTM=0.149 tol=3.67
2024-12-07 10:52:49,471 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=62 pTM=0.414 ipTM=0.148 tol=3.87
2024-12-07 10:53:05,707 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62.8 pTM=0.422 ipTM=0.154 tol=3.98
2024-12-07 10:53:21,933 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63.1 pTM=0.422 ipTM=0.149 tol=4.75
2024-12-07 10:53:38,166 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.4 pTM=0.419 ipTM=0.153 tol=2.3
2024-12-07 10:53:54,383 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.5 pTM=0.411 ipTM=0.148 tol=2.18
2024-12-07 10:54:10,606 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.9 pTM=0.416 ipTM=0.153 tol=2.33
2024-12-07 10:54:26,841 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63 pTM=0.417 ipTM=0.146 tol=6.61
2024-12-07 10:54:43,087 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=63.2 pTM=0.42 ipTM=0.147 tol=8.53
2024-12-07 10:54:59,302 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62.2 pTM=0.414 ipTM=0.147 tol=3.07
2024-12-07 10:55:15,524 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=62 pTM=0.413 ipTM=0.146 tol=4.89
2024-12-07 10:55:31,737 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.6 pTM=0.41 ipTM=0.149 tol=3.91
2024-12-07 10:55:47,949 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62.1 pTM=0.412 ipTM=0.15 tol=3.71
2024-12-07 10:56:04,175 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62.9 pTM=0.416 ipTM=0.145 tol=5.89
2024-12-07 10:56:20,393 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62.7 pTM=0.416 ipTM=0.146 tol=3.95
2024-12-07 10:56:36,614 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.7 pTM=0.41 ipTM=0.146 tol=3.65
2024-12-07 10:56:52,830 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.6 pTM=0.416 ipTM=0.145 tol=3.12
2024-12-07 10:57:09,031 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=62.1 pTM=0.412 ipTM=0.144 tol=2.29
2024-12-07 10:57:25,239 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.6 pTM=0.41 ipTM=0.148 tol=2.94
2024-12-07 10:57:41,454 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62 pTM=0.411 ipTM=0.146 tol=1.94
2024-12-07 10:57:57,680 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62.8 pTM=0.418 ipTM=0.148 tol=4.83
2024-12-07 10:58:13,895 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=62.7 pTM=0.415 ipTM=0.145 tol=3.36
2024-12-07 10:58:30,117 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.7 pTM=0.412 ipTM=0.154 tol=2.83
2024-12-07 10:58:46,332 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62 pTM=0.41 ipTM=0.148 tol=2.15
2024-12-07 10:59:02,557 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=63.3 pTM=0.419 ipTM=0.146 tol=4.34
2024-12-07 10:59:18,782 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=63.2 pTM=0.419 ipTM=0.145 tol=3.64
2024-12-07 10:59:18,783 alphafold2_multimer_v3_model_5_seed_000 took 502.9s (30 recycles)
2024-12-07 10:59:19,271 reranking models by 'multimer' metric
2024-12-07 10:59:22,381 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 11:00:37,517 Relaxation took 78.2s
2024-12-07 11:00:37,517 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=64.9 pTM=0.407 ipTM=0.407
2024-12-07 11:01:14,715 Relaxation took 37.2s
2024-12-07 11:01:14,716 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=61.2 pTM=0.417 ipTM=0.152
2024-12-07 11:02:20,640 Relaxation took 65.9s
2024-12-07 11:02:20,640 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=62.3 pTM=0.414 ipTM=0.15
2024-12-07 11:03:14,966 Relaxation took 54.3s
2024-12-07 11:03:14,966 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=63.2 pTM=0.419 ipTM=0.145
2024-12-07 11:04:33,544 Relaxation took 78.6s
2024-12-07 11:04:33,544 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.5 pTM=0.417 ipTM=0.137
2024-12-07 11:04:35,086 Done