2024-12-07 10:18:47,649 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-07 10:18:47,994 Running on GPU 2024-12-07 10:18:52,405 Found 6 citations for tools or databases 2024-12-07 10:18:52,405 Query 1/1: OSTM1_TARBP1 (length 1955) 2024-12-07 10:18:54,425 Sleeping for 7s. Reason: PENDING 2024-12-07 10:19:01,683 Sleeping for 7s. Reason: RUNNING 2024-12-07 10:19:08,946 Sleeping for 9s. Reason: RUNNING 2024-12-07 10:19:18,227 Sleeping for 10s. Reason: RUNNING 2024-12-07 10:19:28,498 Sleeping for 7s. Reason: RUNNING 2024-12-07 10:19:35,774 Sleeping for 6s. Reason: RUNNING 2024-12-07 10:19:42,027 Sleeping for 5s. Reason: RUNNING 2024-12-07 10:19:47,291 Sleeping for 8s. Reason: RUNNING 2024-12-07 10:19:55,547 Sleeping for 7s. Reason: RUNNING 2024-12-07 10:20:02,808 Sleeping for 8s. Reason: RUNNING 2024-12-07 10:20:11,070 Sleeping for 9s. Reason: RUNNING 2024-12-07 10:20:20,335 Sleeping for 6s. Reason: RUNNING 2024-12-07 10:20:26,592 Sleeping for 5s. Reason: RUNNING 2024-12-07 10:20:31,856 Sleeping for 9s. Reason: RUNNING 2024-12-07 10:20:41,115 Sleeping for 10s. Reason: RUNNING 2024-12-07 10:20:51,375 Sleeping for 9s. Reason: RUNNING 2024-12-07 10:21:04,758 Setting max_seq=508, max_extra_seq=2048 2024-12-07 10:26:27,397 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=74.8 pTM=0.673 ipTM=0.246 2024-12-07 10:28:57,564 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=75.6 pTM=0.675 ipTM=0.233 tol=5.45 2024-12-07 10:31:27,704 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=75.9 pTM=0.684 ipTM=0.255 tol=2.08 2024-12-07 10:33:57,783 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=75.8 pTM=0.691 ipTM=0.289 tol=5.02 2024-12-07 10:36:27,894 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=76.1 pTM=0.697 ipTM=0.275 tol=2.54 2024-12-07 10:38:58,064 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=76.2 pTM=0.699 ipTM=0.266 tol=2.46 2024-12-07 10:41:28,229 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=76 pTM=0.701 ipTM=0.279 tol=3.77 2024-12-07 10:43:58,492 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=75.9 pTM=0.705 ipTM=0.313 tol=3.01 2024-12-07 10:46:28,705 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=76 pTM=0.704 ipTM=0.289 tol=4.13 2024-12-07 10:48:58,777 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=76.1 pTM=0.704 ipTM=0.269 tol=2.87 2024-12-07 10:51:28,843 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=76.3 pTM=0.701 ipTM=0.257 tol=2.01 2024-12-07 10:53:58,965 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=76.1 pTM=0.71 ipTM=0.292 tol=4.14 2024-12-07 10:56:29,184 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=76.2 pTM=0.712 ipTM=0.284 tol=3.59 2024-12-07 10:58:59,348 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=76.2 pTM=0.708 ipTM=0.288 tol=3.73 2024-12-07 11:01:29,462 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=76 pTM=0.709 ipTM=0.286 tol=3.43 2024-12-07 11:03:59,645 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=76.2 pTM=0.699 ipTM=0.255 tol=2.61 2024-12-07 11:06:29,802 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=76.3 pTM=0.708 ipTM=0.293 tol=2.31 2024-12-07 11:08:59,913 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=76.1 pTM=0.71 ipTM=0.301 tol=2.48 2024-12-07 11:11:29,991 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=76 pTM=0.707 ipTM=0.302 tol=2.33 2024-12-07 11:14:00,127 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=76 pTM=0.709 ipTM=0.302 tol=3.4 2024-12-07 11:16:30,300 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=76.1 pTM=0.698 ipTM=0.26 tol=3.31 2024-12-07 11:19:00,447 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=76.1 pTM=0.71 ipTM=0.298 tol=1.77 2024-12-07 11:21:30,697 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=76.1 pTM=0.705 ipTM=0.283 tol=1.32 2024-12-07 11:24:00,917 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=76 pTM=0.707 ipTM=0.29 tol=1.44 2024-12-07 11:26:31,213 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=76.1 pTM=0.705 ipTM=0.296 tol=2.4 2024-12-07 11:29:01,325 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=76.1 pTM=0.704 ipTM=0.302 tol=3.18 2024-12-07 11:31:31,415 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=76.1 pTM=0.7 ipTM=0.272 tol=2.65 2024-12-07 11:34:01,479 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=76.2 pTM=0.71 ipTM=0.322 tol=1.96 2024-12-07 11:36:31,626 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=76 pTM=0.706 ipTM=0.288 tol=1.57 2024-12-07 11:39:01,705 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=76 pTM=0.708 ipTM=0.317 tol=2.77 2024-12-07 11:41:31,884 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=76.1 pTM=0.709 ipTM=0.289 tol=3.26 2024-12-07 11:41:31,886 alphafold2_multimer_v3_model_1_seed_000 took 4821.7s (30 recycles) 2024-12-07 11:44:04,448 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=74.6 pTM=0.655 ipTM=0.226 2024-12-07 11:46:34,871 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=75.8 pTM=0.667 ipTM=0.232 tol=5.55 2024-12-07 11:49:05,268 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=75.9 pTM=0.664 ipTM=0.231 tol=4.31 2024-12-07 11:51:35,628 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=76.2 pTM=0.665 ipTM=0.233 tol=1.8 2024-12-07 11:54:05,880 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=76.3 pTM=0.67 ipTM=0.232 tol=1.52 2024-12-07 11:56:36,205 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=76.4 pTM=0.672 ipTM=0.235 tol=1.56 2024-12-07 11:59:06,583 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=76.4 pTM=0.67 ipTM=0.236 tol=2.1 2024-12-07 12:01:36,976 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=76.6 pTM=0.673 ipTM=0.238 tol=1.32 2024-12-07 12:04:07,401 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=76.5 pTM=0.674 ipTM=0.24 tol=0.865 2024-12-07 12:06:37,798 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=76.5 pTM=0.671 ipTM=0.239 tol=1.16 2024-12-07 12:09:08,244 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=76.8 pTM=0.677 ipTM=0.238 tol=1.45 2024-12-07 12:11:38,640 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=76.6 pTM=0.677 ipTM=0.239 tol=0.957 2024-12-07 12:14:09,072 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=76.6 pTM=0.679 ipTM=0.236 tol=1.09 2024-12-07 12:16:39,478 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=76.6 pTM=0.677 ipTM=0.237 tol=1.58 2024-12-07 12:19:09,776 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=76.5 pTM=0.674 ipTM=0.236 tol=1.56 2024-12-07 12:21:40,040 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=76.6 pTM=0.677 ipTM=0.236 tol=1.34 2024-12-07 12:24:10,374 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=76.8 pTM=0.68 ipTM=0.241 tol=2.03 2024-12-07 12:26:40,757 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=76.6 pTM=0.68 ipTM=0.238 tol=1.81 2024-12-07 12:29:11,109 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=76.6 pTM=0.678 ipTM=0.238 tol=1.02 2024-12-07 12:31:41,402 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=76.8 pTM=0.677 ipTM=0.239 tol=0.644 2024-12-07 12:34:11,762 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=76.6 pTM=0.673 ipTM=0.24 tol=0.802 2024-12-07 12:36:42,177 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=76.5 pTM=0.676 ipTM=0.238 tol=1.15 2024-12-07 12:39:12,560 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=76.7 pTM=0.676 ipTM=0.239 tol=0.709 2024-12-07 12:41:42,948 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=76.6 pTM=0.676 ipTM=0.238 tol=0.831 2024-12-07 12:44:13,282 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=76.8 pTM=0.678 ipTM=0.238 tol=0.842 2024-12-07 12:46:43,693 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=76.7 pTM=0.68 ipTM=0.237 tol=1.33 2024-12-07 12:49:14,092 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=76.8 pTM=0.681 ipTM=0.24 tol=1.12 2024-12-07 12:51:44,516 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=76.6 pTM=0.679 ipTM=0.236 tol=1.07 2024-12-07 12:54:14,809 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=76.7 pTM=0.678 ipTM=0.24 tol=0.808 2024-12-07 12:56:45,039 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=76.6 pTM=0.678 ipTM=0.239 tol=1.43 2024-12-07 12:59:15,208 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=76.7 pTM=0.68 ipTM=0.241 tol=1.46 2024-12-07 12:59:15,211 alphafold2_multimer_v3_model_2_seed_000 took 4661.1s (30 recycles) 2024-12-07 13:01:47,689 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=74.3 pTM=0.65 ipTM=0.204 2024-12-07 13:04:17,937 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=74.8 pTM=0.644 ipTM=0.22 tol=4.89 2024-12-07 13:06:48,224 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=74.8 pTM=0.646 ipTM=0.226 tol=2.54 2024-12-07 13:09:18,507 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=74.9 pTM=0.654 ipTM=0.229 tol=1.8 2024-12-07 13:11:48,773 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=75 pTM=0.659 ipTM=0.229 tol=1.52 2024-12-07 13:14:18,967 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=75.2 pTM=0.663 ipTM=0.231 tol=3.1 2024-12-07 13:16:49,221 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=75.2 pTM=0.666 ipTM=0.233 tol=2 2024-12-07 13:19:19,516 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=75.2 pTM=0.668 ipTM=0.23 tol=2.82 2024-12-07 13:21:49,743 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=75.2 pTM=0.67 ipTM=0.236 tol=4.17 2024-12-07 13:24:19,952 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=75.2 pTM=0.669 ipTM=0.236 tol=2.13 2024-12-07 13:26:50,177 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=75.6 pTM=0.679 ipTM=0.24 tol=4.36 2024-12-07 13:29:20,380 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=75.4 pTM=0.676 ipTM=0.243 tol=2.51 2024-12-07 13:31:50,613 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=75.4 pTM=0.677 ipTM=0.241 tol=2.15 2024-12-07 13:34:20,960 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=75.7 pTM=0.684 ipTM=0.254 tol=3.07 2024-12-07 13:36:51,298 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=75.7 pTM=0.685 ipTM=0.254 tol=2.02 2024-12-07 13:39:21,573 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=75.8 pTM=0.689 ipTM=0.26 tol=2.48 2024-12-07 13:41:51,877 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=76 pTM=0.692 ipTM=0.27 tol=3.32 2024-12-07 13:44:22,186 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=76.1 pTM=0.695 ipTM=0.286 tol=2.89 2024-12-07 13:46:52,348 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=76.3 pTM=0.699 ipTM=0.302 tol=1.54 2024-12-07 13:49:22,412 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=76.4 pTM=0.699 ipTM=0.305 tol=1.07 2024-12-07 13:51:52,482 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=76.1 pTM=0.695 ipTM=0.298 tol=3.01 2024-12-07 13:54:22,637 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=76.1 pTM=0.697 ipTM=0.289 tol=2.2 2024-12-07 13:56:52,764 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=76.1 pTM=0.697 ipTM=0.29 tol=1.25 2024-12-07 13:59:22,977 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=76.2 pTM=0.698 ipTM=0.295 tol=1.28 2024-12-07 14:01:53,230 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=76.1 pTM=0.697 ipTM=0.285 tol=1.49 2024-12-07 14:04:23,344 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=76.2 pTM=0.699 ipTM=0.285 tol=1.87 2024-12-07 14:06:53,442 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=76.1 pTM=0.701 ipTM=0.288 tol=4.39 2024-12-07 14:09:23,600 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=76.2 pTM=0.7 ipTM=0.285 tol=1.17 2024-12-07 14:11:53,858 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=76.1 pTM=0.699 ipTM=0.286 tol=1.42 2024-12-07 14:14:24,094 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=76.2 pTM=0.7 ipTM=0.289 tol=1.43 2024-12-07 14:16:54,275 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=76.2 pTM=0.704 ipTM=0.3 tol=1.36 2024-12-07 14:16:54,277 alphafold2_multimer_v3_model_3_seed_000 took 4656.8s (30 recycles) 2024-12-07 14:19:26,824 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=74.6 pTM=0.675 ipTM=0.213 2024-12-07 14:21:57,134 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=74.9 pTM=0.667 ipTM=0.214 tol=6.9 2024-12-07 14:24:27,452 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=75.2 pTM=0.663 ipTM=0.223 tol=2.87 2024-12-07 14:26:57,863 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=75.2 pTM=0.663 ipTM=0.212 tol=1.95 2024-12-07 14:29:28,228 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=75.2 pTM=0.665 ipTM=0.21 tol=1.48 2024-12-07 14:31:58,538 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=75.4 pTM=0.668 ipTM=0.211 tol=0.98 2024-12-07 14:34:28,863 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=75.2 pTM=0.665 ipTM=0.209 tol=1.33 2024-12-07 14:36:59,234 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=75.2 pTM=0.668 ipTM=0.209 tol=1.32 2024-12-07 14:39:29,613 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=75.1 pTM=0.667 ipTM=0.209 tol=1.37 2024-12-07 14:41:59,971 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=75.1 pTM=0.667 ipTM=0.209 tol=1.28 2024-12-07 14:44:30,334 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=75.3 pTM=0.67 ipTM=0.207 tol=1.12 2024-12-07 14:47:00,651 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=75.2 pTM=0.668 ipTM=0.206 tol=0.858 2024-12-07 14:49:30,984 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=75.1 pTM=0.668 ipTM=0.205 tol=0.879 2024-12-07 14:52:01,409 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=75.1 pTM=0.665 ipTM=0.207 tol=1.05 2024-12-07 14:54:31,766 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=74.9 pTM=0.661 ipTM=0.203 tol=1.28 2024-12-07 14:57:02,080 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=74.9 pTM=0.661 ipTM=0.205 tol=1.11 2024-12-07 14:59:32,397 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=75 pTM=0.661 ipTM=0.204 tol=1.05 2024-12-07 15:02:02,858 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=75.1 pTM=0.665 ipTM=0.204 tol=0.994 2024-12-07 15:04:33,272 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=74.9 pTM=0.661 ipTM=0.206 tol=1.74 2024-12-07 15:07:03,661 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=75 pTM=0.659 ipTM=0.207 tol=0.798 2024-12-07 15:09:34,028 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=74.9 pTM=0.658 ipTM=0.205 tol=1.98 2024-12-07 15:12:04,404 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=75 pTM=0.66 ipTM=0.208 tol=0.602 2024-12-07 15:14:34,748 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=74.9 pTM=0.655 ipTM=0.205 tol=0.828 2024-12-07 15:17:05,118 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=74.9 pTM=0.656 ipTM=0.205 tol=0.651 2024-12-07 15:19:35,509 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=74.9 pTM=0.657 ipTM=0.205 tol=0.67 2024-12-07 15:22:05,937 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=74.9 pTM=0.657 ipTM=0.209 tol=0.914 2024-12-07 15:24:36,359 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=74.9 pTM=0.655 ipTM=0.205 tol=1.24 2024-12-07 15:27:06,787 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=74.9 pTM=0.656 ipTM=0.203 tol=1.21 2024-12-07 15:29:37,207 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=74.9 pTM=0.656 ipTM=0.205 tol=1.08 2024-12-07 15:32:07,630 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=74.9 pTM=0.658 ipTM=0.206 tol=1.91 2024-12-07 15:34:38,061 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=75 pTM=0.66 ipTM=0.206 tol=0.674 2024-12-07 15:34:38,063 alphafold2_multimer_v3_model_4_seed_000 took 4661.6s (30 recycles) 2024-12-07 15:37:10,853 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=72.9 pTM=0.632 ipTM=0.204 2024-12-07 15:39:41,317 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=74.4 pTM=0.635 ipTM=0.205 tol=4.43 2024-12-07 15:42:11,769 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=74.5 pTM=0.63 ipTM=0.212 tol=2.55 2024-12-07 15:44:42,201 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=74.8 pTM=0.638 ipTM=0.215 tol=2.82 2024-12-07 15:47:12,602 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=74.8 pTM=0.639 ipTM=0.211 tol=3.41 2024-12-07 15:49:43,007 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=74.9 pTM=0.639 ipTM=0.211 tol=2.03 2024-12-07 15:52:13,458 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=74.9 pTM=0.638 ipTM=0.211 tol=2.59 2024-12-07 15:54:43,906 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=74.9 pTM=0.639 ipTM=0.212 tol=3.71 2024-12-07 15:57:14,214 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=74.8 pTM=0.636 ipTM=0.211 tol=1.65 2024-12-07 15:59:44,625 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=74.9 pTM=0.638 ipTM=0.213 tol=2 2024-12-07 16:02:15,086 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=75 pTM=0.639 ipTM=0.214 tol=2.59 2024-12-07 16:04:45,467 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=74.9 pTM=0.638 ipTM=0.214 tol=3.33 2024-12-07 16:07:15,880 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=74.8 pTM=0.637 ipTM=0.214 tol=2.54 2024-12-07 16:09:46,327 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=74.9 pTM=0.637 ipTM=0.215 tol=1.9 2024-12-07 16:12:16,696 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=74.8 pTM=0.632 ipTM=0.215 tol=2.28 2024-12-07 16:14:47,151 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=74.8 pTM=0.632 ipTM=0.214 tol=3 2024-12-07 16:17:17,531 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=74.8 pTM=0.633 ipTM=0.216 tol=3.11 2024-12-07 16:19:47,837 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=74.8 pTM=0.633 ipTM=0.215 tol=2.44 2024-12-07 16:22:18,077 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=74.7 pTM=0.628 ipTM=0.215 tol=3.36 2024-12-07 16:24:48,302 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=74.9 pTM=0.63 ipTM=0.216 tol=1.92 2024-12-07 16:27:18,514 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=74.6 pTM=0.63 ipTM=0.217 tol=2.56 2024-12-07 16:29:48,845 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=74.8 pTM=0.633 ipTM=0.215 tol=1.41 2024-12-07 16:32:19,226 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=74.9 pTM=0.633 ipTM=0.214 tol=1.36 2024-12-07 16:34:49,544 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=74.9 pTM=0.634 ipTM=0.217 tol=1.35 2024-12-07 16:37:19,846 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=74.7 pTM=0.632 ipTM=0.213 tol=3.06 2024-12-07 16:39:50,291 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=74.8 pTM=0.631 ipTM=0.214 tol=3.33 2024-12-07 16:42:20,780 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=74.8 pTM=0.63 ipTM=0.213 tol=3.33 2024-12-07 16:44:51,250 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=74.6 pTM=0.627 ipTM=0.213 tol=2.62 2024-12-07 16:47:21,659 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=74.7 pTM=0.631 ipTM=0.214 tol=3.15 2024-12-07 16:49:52,071 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=74.6 pTM=0.631 ipTM=0.213 tol=2.34 2024-12-07 16:52:22,423 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=74.6 pTM=0.63 ipTM=0.214 tol=1.52 2024-12-07 16:52:22,426 alphafold2_multimer_v3_model_5_seed_000 took 4662.1s (30 recycles) 2024-12-07 16:52:24,635 reranking models by 'multimer' metric 2024-12-07 16:52:28,728 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-07 16:58:25,891 Relaxation took 361.3s 2024-12-07 16:58:25,891 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=76.2 pTM=0.704 ipTM=0.3 2024-12-07 17:04:34,355 Relaxation took 368.5s 2024-12-07 17:04:34,355 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=76.1 pTM=0.709 ipTM=0.289 2024-12-07 17:49:19,081 Relaxation took 2684.7s 2024-12-07 17:49:19,082 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=76.7 pTM=0.68 ipTM=0.241 2024-12-07 17:51:54,904 Relaxation took 155.8s 2024-12-07 17:51:54,904 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=74.6 pTM=0.63 ipTM=0.214 2024-12-07 17:55:07,949 Relaxation took 193.0s 2024-12-07 17:55:07,949 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=75 pTM=0.66 ipTM=0.206 2024-12-07 17:55:13,049 Done