2024-12-07 10:19:53,600 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-07 10:19:53,930 Running on GPU 2024-12-07 10:19:58,330 Found 6 citations for tools or databases 2024-12-07 10:19:58,330 Query 1/1: OSTM1_TUBA4A (length 782) 2024-12-07 10:20:00,154 Sleeping for 8s. Reason: PENDING 2024-12-07 10:20:08,420 Sleeping for 6s. Reason: RUNNING 2024-12-07 10:20:14,691 Sleeping for 7s. Reason: RUNNING 2024-12-07 10:20:21,955 Sleeping for 7s. Reason: RUNNING 2024-12-07 10:20:29,363 Sleeping for 9s. Reason: RUNNING 2024-12-07 10:20:38,617 Sleeping for 7s. Reason: RUNNING 2024-12-07 10:20:45,882 Sleeping for 7s. Reason: RUNNING 2024-12-07 10:20:53,140 Sleeping for 9s. Reason: RUNNING 2024-12-07 10:21:04,732 Setting max_seq=508, max_extra_seq=2048 2024-12-07 10:23:45,810 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=73.5 pTM=0.585 ipTM=0.186 2024-12-07 10:23:57,990 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=75.6 pTM=0.601 ipTM=0.225 tol=4.68 2024-12-07 10:24:10,182 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=75.3 pTM=0.598 ipTM=0.222 tol=2.21 2024-12-07 10:24:22,388 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=75.7 pTM=0.603 ipTM=0.235 tol=1.19 2024-12-07 10:24:34,629 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=75.8 pTM=0.596 ipTM=0.224 tol=1.46 2024-12-07 10:24:46,922 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=76.2 pTM=0.602 ipTM=0.259 tol=1.25 2024-12-07 10:24:59,227 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=76.3 pTM=0.6 ipTM=0.221 tol=1.32 2024-12-07 10:25:11,543 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=76.3 pTM=0.598 ipTM=0.232 tol=4.53 2024-12-07 10:25:23,854 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=76.2 pTM=0.597 ipTM=0.217 tol=4.39 2024-12-07 10:25:36,158 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=75.9 pTM=0.594 ipTM=0.214 tol=0.768 2024-12-07 10:25:48,454 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=75.9 pTM=0.596 ipTM=0.219 tol=0.938 2024-12-07 10:26:00,762 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=76.2 pTM=0.596 ipTM=0.209 tol=1.68 2024-12-07 10:26:13,069 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=76.2 pTM=0.595 ipTM=0.241 tol=1.45 2024-12-07 10:26:25,397 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=76.2 pTM=0.6 ipTM=0.218 tol=1.43 2024-12-07 10:26:37,730 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=76.2 pTM=0.595 ipTM=0.217 tol=0.509 2024-12-07 10:26:50,065 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=75.9 pTM=0.598 ipTM=0.211 tol=0.688 2024-12-07 10:27:02,398 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=76.1 pTM=0.596 ipTM=0.24 tol=0.799 2024-12-07 10:27:14,725 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=76.1 pTM=0.596 ipTM=0.214 tol=1.17 2024-12-07 10:27:27,064 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=76.4 pTM=0.6 ipTM=0.22 tol=0.838 2024-12-07 10:27:39,396 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=76.1 pTM=0.598 ipTM=0.22 tol=0.743 2024-12-07 10:27:51,722 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=76.2 pTM=0.599 ipTM=0.22 tol=1.02 2024-12-07 10:28:04,045 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=76.1 pTM=0.601 ipTM=0.235 tol=1.09 2024-12-07 10:28:16,371 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=76.2 pTM=0.598 ipTM=0.216 tol=1.23 2024-12-07 10:28:28,695 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=76.2 pTM=0.599 ipTM=0.224 tol=1.49 2024-12-07 10:28:41,008 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=76.1 pTM=0.596 ipTM=0.21 tol=1.5 2024-12-07 10:28:53,333 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=75.8 pTM=0.594 ipTM=0.207 tol=1.55 2024-12-07 10:29:05,663 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=76.3 pTM=0.599 ipTM=0.279 tol=1.48 2024-12-07 10:29:17,997 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=76.3 pTM=0.601 ipTM=0.228 tol=1.17 2024-12-07 10:29:30,327 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=76.4 pTM=0.603 ipTM=0.24 tol=1.26 2024-12-07 10:29:42,654 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=76.3 pTM=0.603 ipTM=0.239 tol=1.21 2024-12-07 10:29:54,980 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=76.3 pTM=0.601 ipTM=0.223 tol=1.76 2024-12-07 10:29:54,981 alphafold2_multimer_v3_model_1_seed_000 took 524.8s (30 recycles) 2024-12-07 10:30:07,772 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=73.4 pTM=0.571 ipTM=0.151 2024-12-07 10:30:20,165 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=75.4 pTM=0.58 ipTM=0.172 tol=6.65 2024-12-07 10:30:32,563 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=75.1 pTM=0.575 ipTM=0.166 tol=2.29 2024-12-07 10:30:44,963 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=75.4 pTM=0.581 ipTM=0.18 tol=1.81 2024-12-07 10:30:57,364 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=75.7 pTM=0.579 ipTM=0.171 tol=1.21 2024-12-07 10:31:09,782 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=75.8 pTM=0.578 ipTM=0.164 tol=1.49 2024-12-07 10:31:22,183 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=76.1 pTM=0.584 ipTM=0.178 tol=1.19 2024-12-07 10:31:34,589 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=76.1 pTM=0.581 ipTM=0.169 tol=1.07 2024-12-07 10:31:47,000 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=76.2 pTM=0.582 ipTM=0.166 tol=1.03 2024-12-07 10:31:59,390 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=76.2 pTM=0.583 ipTM=0.18 tol=1.19 2024-12-07 10:32:11,792 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=76.3 pTM=0.583 ipTM=0.176 tol=0.689 2024-12-07 10:32:24,197 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=76.4 pTM=0.58 ipTM=0.162 tol=1.16 2024-12-07 10:32:36,583 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=76.1 pTM=0.58 ipTM=0.168 tol=0.778 2024-12-07 10:32:48,984 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=76.4 pTM=0.583 ipTM=0.175 tol=1.3 2024-12-07 10:33:01,382 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=76.1 pTM=0.58 ipTM=0.169 tol=1.02 2024-12-07 10:33:13,776 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=76.2 pTM=0.584 ipTM=0.181 tol=1.1 2024-12-07 10:33:26,172 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=76.1 pTM=0.581 ipTM=0.172 tol=1.01 2024-12-07 10:33:38,562 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=76.4 pTM=0.585 ipTM=0.184 tol=0.739 2024-12-07 10:33:50,973 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=76.5 pTM=0.583 ipTM=0.171 tol=0.699 2024-12-07 10:34:03,376 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=76.1 pTM=0.581 ipTM=0.173 tol=0.564 2024-12-07 10:34:15,780 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=76.2 pTM=0.584 ipTM=0.18 tol=0.772 2024-12-07 10:34:28,192 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=76.3 pTM=0.58 ipTM=0.164 tol=0.952 2024-12-07 10:34:40,603 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=76.2 pTM=0.584 ipTM=0.173 tol=0.685 2024-12-07 10:34:53,005 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=76.4 pTM=0.584 ipTM=0.175 tol=0.92 2024-12-07 10:35:05,401 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=76.2 pTM=0.582 ipTM=0.168 tol=1.03 2024-12-07 10:35:17,798 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=76.1 pTM=0.583 ipTM=0.178 tol=1.03 2024-12-07 10:35:30,211 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=76.2 pTM=0.582 ipTM=0.169 tol=1.33 2024-12-07 10:35:42,626 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=76.2 pTM=0.583 ipTM=0.178 tol=1.1 2024-12-07 10:35:55,040 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=76.1 pTM=0.582 ipTM=0.174 tol=0.901 2024-12-07 10:36:07,454 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=76.3 pTM=0.583 ipTM=0.173 tol=1.34 2024-12-07 10:36:19,862 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=76.2 pTM=0.583 ipTM=0.171 tol=0.641 2024-12-07 10:36:19,863 alphafold2_multimer_v3_model_2_seed_000 took 384.5s (30 recycles) 2024-12-07 10:36:32,683 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=73.5 pTM=0.575 ipTM=0.119 2024-12-07 10:36:45,111 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=74.1 pTM=0.573 ipTM=0.12 tol=6.32 2024-12-07 10:36:57,534 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=74.6 pTM=0.577 ipTM=0.144 tol=3.27 2024-12-07 10:37:09,966 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=74.9 pTM=0.578 ipTM=0.142 tol=1.78 2024-12-07 10:37:22,406 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=74.9 pTM=0.578 ipTM=0.143 tol=2.15 2024-12-07 10:37:34,838 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=75.3 pTM=0.58 ipTM=0.144 tol=2.28 2024-12-07 10:37:47,285 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=75.2 pTM=0.579 ipTM=0.14 tol=1.96 2024-12-07 10:37:59,735 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=75.9 pTM=0.584 ipTM=0.15 tol=1.99 2024-12-07 10:38:12,179 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=75.8 pTM=0.581 ipTM=0.139 tol=1.94 2024-12-07 10:38:24,610 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=75.7 pTM=0.583 ipTM=0.143 tol=1.45 2024-12-07 10:38:37,052 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=75.6 pTM=0.583 ipTM=0.144 tol=1.25 2024-12-07 10:38:49,508 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=76.2 pTM=0.586 ipTM=0.15 tol=1.39 2024-12-07 10:39:01,951 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=75.9 pTM=0.584 ipTM=0.145 tol=1.81 2024-12-07 10:39:14,405 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=76.1 pTM=0.584 ipTM=0.142 tol=1 2024-12-07 10:39:26,849 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=76 pTM=0.585 ipTM=0.146 tol=1.61 2024-12-07 10:39:39,299 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=76.2 pTM=0.586 ipTM=0.146 tol=1.31 2024-12-07 10:39:51,743 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=76.2 pTM=0.585 ipTM=0.146 tol=1.15 2024-12-07 10:40:04,179 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=76.3 pTM=0.587 ipTM=0.149 tol=1.45 2024-12-07 10:40:16,622 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=76.2 pTM=0.585 ipTM=0.144 tol=1.61 2024-12-07 10:40:29,069 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=76.4 pTM=0.587 ipTM=0.146 tol=1.07 2024-12-07 10:40:41,527 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=76.4 pTM=0.586 ipTM=0.145 tol=1.13 2024-12-07 10:40:53,996 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=76.6 pTM=0.588 ipTM=0.145 tol=1.41 2024-12-07 10:41:06,461 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=76.4 pTM=0.586 ipTM=0.144 tol=1.28 2024-12-07 10:41:18,919 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=76.4 pTM=0.585 ipTM=0.141 tol=0.931 2024-12-07 10:41:31,372 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=76.4 pTM=0.586 ipTM=0.145 tol=0.811 2024-12-07 10:41:43,830 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=76.3 pTM=0.585 ipTM=0.143 tol=0.873 2024-12-07 10:41:56,295 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=76.2 pTM=0.585 ipTM=0.139 tol=1.99 2024-12-07 10:42:08,767 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=76.6 pTM=0.588 ipTM=0.148 tol=1.07 2024-12-07 10:42:21,227 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=76.6 pTM=0.586 ipTM=0.144 tol=1.45 2024-12-07 10:42:33,704 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=76.6 pTM=0.587 ipTM=0.148 tol=2.26 2024-12-07 10:42:46,173 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=76.5 pTM=0.586 ipTM=0.142 tol=0.861 2024-12-07 10:42:46,174 alphafold2_multimer_v3_model_3_seed_000 took 385.9s (30 recycles) 2024-12-07 10:42:59,020 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=73.3 pTM=0.582 ipTM=0.168 2024-12-07 10:43:11,534 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=75.1 pTM=0.581 ipTM=0.133 tol=9.88 2024-12-07 10:43:24,033 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=75 pTM=0.577 ipTM=0.135 tol=7.39 2024-12-07 10:43:36,520 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=75.1 pTM=0.576 ipTM=0.137 tol=5.43 2024-12-07 10:43:49,017 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=75.6 pTM=0.576 ipTM=0.136 tol=3.12 2024-12-07 10:44:01,522 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=75.8 pTM=0.576 ipTM=0.135 tol=2.97 2024-12-07 10:44:14,024 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=75.9 pTM=0.576 ipTM=0.133 tol=2.56 2024-12-07 10:44:26,524 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=76.2 pTM=0.578 ipTM=0.133 tol=4.08 2024-12-07 10:44:39,026 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=76.2 pTM=0.578 ipTM=0.133 tol=2.85 2024-12-07 10:44:51,517 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=75.9 pTM=0.577 ipTM=0.135 tol=1.94 2024-12-07 10:45:04,031 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=76.2 pTM=0.577 ipTM=0.132 tol=3.21 2024-12-07 10:45:16,537 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=76.2 pTM=0.579 ipTM=0.138 tol=3.87 2024-12-07 10:45:29,024 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=76.2 pTM=0.579 ipTM=0.138 tol=1.84 2024-12-07 10:45:41,514 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=76.2 pTM=0.58 ipTM=0.14 tol=1.86 2024-12-07 10:45:54,009 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=76.3 pTM=0.579 ipTM=0.138 tol=1.33 2024-12-07 10:46:06,490 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=75.9 pTM=0.579 ipTM=0.139 tol=3.01 2024-12-07 10:46:18,989 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=76.2 pTM=0.578 ipTM=0.134 tol=2.75 2024-12-07 10:46:31,467 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=76.1 pTM=0.578 ipTM=0.135 tol=3.09 2024-12-07 10:46:43,966 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=76.2 pTM=0.578 ipTM=0.134 tol=2.45 2024-12-07 10:46:56,458 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=76.2 pTM=0.578 ipTM=0.133 tol=1.93 2024-12-07 10:47:08,961 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=76.2 pTM=0.579 ipTM=0.134 tol=2.45 2024-12-07 10:47:21,446 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=76.3 pTM=0.578 ipTM=0.133 tol=1.66 2024-12-07 10:47:33,944 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=76.4 pTM=0.579 ipTM=0.135 tol=2.08 2024-12-07 10:47:46,428 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=76.5 pTM=0.579 ipTM=0.136 tol=2.22 2024-12-07 10:47:58,917 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=76.4 pTM=0.579 ipTM=0.135 tol=1.24 2024-12-07 10:48:11,399 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=76.1 pTM=0.579 ipTM=0.135 tol=1.63 2024-12-07 10:48:23,891 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=76.2 pTM=0.579 ipTM=0.132 tol=3.55 2024-12-07 10:48:36,378 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=76.4 pTM=0.579 ipTM=0.135 tol=3.22 2024-12-07 10:48:48,859 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=76.2 pTM=0.579 ipTM=0.134 tol=1.18 2024-12-07 10:49:01,337 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=76.3 pTM=0.579 ipTM=0.136 tol=1.64 2024-12-07 10:49:13,812 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=76.3 pTM=0.579 ipTM=0.136 tol=3.17 2024-12-07 10:49:13,813 alphafold2_multimer_v3_model_4_seed_000 took 387.3s (30 recycles) 2024-12-07 10:49:26,644 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=72.9 pTM=0.574 ipTM=0.128 2024-12-07 10:49:39,082 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=73.5 pTM=0.574 ipTM=0.128 tol=7.49 2024-12-07 10:49:51,524 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=74.2 pTM=0.575 ipTM=0.135 tol=5.35 2024-12-07 10:50:03,967 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=75 pTM=0.577 ipTM=0.137 tol=5.56 2024-12-07 10:50:16,409 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=75.2 pTM=0.578 ipTM=0.135 tol=3.72 2024-12-07 10:50:28,855 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=75.8 pTM=0.578 ipTM=0.132 tol=4.35 2024-12-07 10:50:41,303 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=75.9 pTM=0.58 ipTM=0.134 tol=2.84 2024-12-07 10:50:53,749 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=75.9 pTM=0.579 ipTM=0.132 tol=8.12 2024-12-07 10:51:06,220 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=76.4 pTM=0.58 ipTM=0.129 tol=3.27 2024-12-07 10:51:18,680 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=76.1 pTM=0.578 ipTM=0.127 tol=2.69 2024-12-07 10:51:31,162 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=76.2 pTM=0.58 ipTM=0.127 tol=2.68 2024-12-07 10:51:43,629 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=76.2 pTM=0.581 ipTM=0.128 tol=3.31 2024-12-07 10:51:56,099 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=76.2 pTM=0.58 ipTM=0.127 tol=2.19 2024-12-07 10:52:08,553 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=76.1 pTM=0.58 ipTM=0.13 tol=3.66 2024-12-07 10:52:21,007 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=76.1 pTM=0.58 ipTM=0.128 tol=2.71 2024-12-07 10:52:33,454 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=76.1 pTM=0.58 ipTM=0.13 tol=3.23 2024-12-07 10:52:45,930 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=76.1 pTM=0.58 ipTM=0.13 tol=4.52 2024-12-07 10:52:58,413 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=76.2 pTM=0.58 ipTM=0.128 tol=2.38 2024-12-07 10:53:10,891 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=76.2 pTM=0.58 ipTM=0.126 tol=3.03 2024-12-07 10:53:23,371 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=76.1 pTM=0.581 ipTM=0.126 tol=2.59 2024-12-07 10:53:35,846 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=76.1 pTM=0.58 ipTM=0.127 tol=3.86 2024-12-07 10:53:48,321 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=76.1 pTM=0.58 ipTM=0.127 tol=5.21 2024-12-07 10:54:00,814 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=76.1 pTM=0.58 ipTM=0.128 tol=1.62 2024-12-07 10:54:13,313 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=76.2 pTM=0.58 ipTM=0.128 tol=2.35 2024-12-07 10:54:25,804 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=76 pTM=0.579 ipTM=0.127 tol=2.05 2024-12-07 10:54:38,298 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=75.9 pTM=0.579 ipTM=0.129 tol=3.37 2024-12-07 10:54:50,795 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=75.9 pTM=0.58 ipTM=0.127 tol=3.3 2024-12-07 10:55:03,288 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=76.1 pTM=0.58 ipTM=0.13 tol=3.53 2024-12-07 10:55:15,785 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=76.2 pTM=0.581 ipTM=0.13 tol=2.87 2024-12-07 10:55:28,275 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=76.2 pTM=0.581 ipTM=0.128 tol=2.8 2024-12-07 10:55:40,756 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=76.1 pTM=0.58 ipTM=0.129 tol=2.4 2024-12-07 10:55:40,757 alphafold2_multimer_v3_model_5_seed_000 took 386.6s (30 recycles) 2024-12-07 10:55:41,144 reranking models by 'multimer' metric 2024-12-07 10:55:43,828 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-07 10:56:34,124 Relaxation took 53.0s 2024-12-07 10:56:34,125 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=76.3 pTM=0.601 ipTM=0.223 2024-12-07 10:57:09,531 Relaxation took 35.4s 2024-12-07 10:57:09,532 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=76.2 pTM=0.583 ipTM=0.171 2024-12-07 10:57:53,972 Relaxation took 44.4s 2024-12-07 10:57:53,972 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=76.5 pTM=0.586 ipTM=0.142 2024-12-07 10:58:15,684 Relaxation took 21.7s 2024-12-07 10:58:15,684 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=76.3 pTM=0.579 ipTM=0.136 2024-12-07 10:58:47,786 Relaxation took 32.1s 2024-12-07 10:58:47,786 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=76.1 pTM=0.58 ipTM=0.129 2024-12-07 10:58:49,178 Done