2024-12-07 10:49:46,217 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 10:49:46,589 Running on GPU
2024-12-07 10:49:50,621 Found 6 citations for tools or databases
2024-12-07 10:49:50,622 Query 1/1: PCGF1_RYBP (length 487)
2024-12-07 10:49:50,919 Sleeping for 5s. Reason: PENDING
2024-12-07 10:49:56,181 Sleeping for 7s. Reason: RUNNING
2024-12-07 10:50:03,438 Sleeping for 7s. Reason: RUNNING
2024-12-07 10:50:10,701 Sleeping for 9s. Reason: RUNNING
2024-12-07 10:50:19,968 Sleeping for 10s. Reason: RUNNING
2024-12-07 10:50:30,230 Sleeping for 5s. Reason: RUNNING
2024-12-07 10:50:35,483 Sleeping for 6s. Reason: RUNNING
2024-12-07 10:50:41,738 Sleeping for 8s. Reason: RUNNING
2024-12-07 10:50:49,993 Sleeping for 5s. Reason: RUNNING
2024-12-07 10:50:55,248 Sleeping for 8s. Reason: RUNNING
2024-12-07 10:51:03,510 Sleeping for 7s. Reason: RUNNING
2024-12-07 10:51:12,220 Sleeping for 9s. Reason: PENDING
2024-12-07 10:51:21,477 Sleeping for 8s. Reason: RUNNING
2024-12-07 10:51:29,741 Sleeping for 5s. Reason: RUNNING
2024-12-07 10:51:35,001 Sleeping for 9s. Reason: RUNNING
2024-12-07 10:51:44,257 Sleeping for 6s. Reason: RUNNING
2024-12-07 10:51:52,547 Setting max_seq=508, max_extra_seq=2048
2024-12-07 10:55:27,694 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=50.5 pTM=0.347 ipTM=0.419
2024-12-07 10:55:34,839 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=51.5 pTM=0.333 ipTM=0.384 tol=6.4
2024-12-07 10:55:41,981 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=53.2 pTM=0.339 ipTM=0.416 tol=5.49
2024-12-07 10:55:49,135 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=53.5 pTM=0.339 ipTM=0.418 tol=4.76
2024-12-07 10:55:56,278 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=53.6 pTM=0.341 ipTM=0.421 tol=3.76
2024-12-07 10:56:03,443 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=53.8 pTM=0.34 ipTM=0.417 tol=3.78
2024-12-07 10:56:10,598 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=54.1 pTM=0.339 ipTM=0.414 tol=2.68
2024-12-07 10:56:17,752 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=53.8 pTM=0.337 ipTM=0.41 tol=3.46
2024-12-07 10:56:24,894 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=54.5 pTM=0.342 ipTM=0.423 tol=1.3
2024-12-07 10:56:32,042 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=54.3 pTM=0.345 ipTM=0.429 tol=1.2
2024-12-07 10:56:39,181 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=54.4 pTM=0.346 ipTM=0.432 tol=1.57
2024-12-07 10:56:46,324 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=54.3 pTM=0.344 ipTM=0.428 tol=1.5
2024-12-07 10:56:53,462 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=54.5 pTM=0.346 ipTM=0.433 tol=1.44
2024-12-07 10:57:00,607 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=54.7 pTM=0.35 ipTM=0.441 tol=2.16
2024-12-07 10:57:07,734 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=54.6 pTM=0.347 ipTM=0.435 tol=2.15
2024-12-07 10:57:14,875 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=54.3 pTM=0.344 ipTM=0.43 tol=1.57
2024-12-07 10:57:22,015 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=54.6 pTM=0.347 ipTM=0.437 tol=1.43
2024-12-07 10:57:29,173 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=54.4 pTM=0.348 ipTM=0.439 tol=1.52
2024-12-07 10:57:36,326 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=54.6 pTM=0.353 ipTM=0.448 tol=1.58
2024-12-07 10:57:43,476 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=54.4 pTM=0.348 ipTM=0.44 tol=3.13
2024-12-07 10:57:50,610 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=54.5 pTM=0.347 ipTM=0.439 tol=1.8
2024-12-07 10:57:57,759 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=54.7 pTM=0.347 ipTM=0.439 tol=2.77
2024-12-07 10:58:04,902 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=54.2 pTM=0.345 ipTM=0.432 tol=2.06
2024-12-07 10:58:12,047 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=54.4 pTM=0.347 ipTM=0.437 tol=1.33
2024-12-07 10:58:19,193 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=54.4 pTM=0.349 ipTM=0.443 tol=1.92
2024-12-07 10:58:26,346 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=54.6 pTM=0.344 ipTM=0.433 tol=5.27
2024-12-07 10:58:33,484 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=54.4 pTM=0.344 ipTM=0.431 tol=2.06
2024-12-07 10:58:40,631 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=54.4 pTM=0.341 ipTM=0.426 tol=4.59
2024-12-07 10:58:47,777 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=54.1 pTM=0.342 ipTM=0.427 tol=1.65
2024-12-07 10:58:54,945 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=54.6 pTM=0.347 ipTM=0.438 tol=1.59
2024-12-07 10:59:02,098 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=54.5 pTM=0.346 ipTM=0.437 tol=1.65
2024-12-07 10:59:02,099 alphafold2_multimer_v3_model_1_seed_000 took 422.0s (30 recycles)
2024-12-07 10:59:09,468 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=52.3 pTM=0.344 ipTM=0.393
2024-12-07 10:59:16,645 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=51.4 pTM=0.33 ipTM=0.366 tol=9.95
2024-12-07 10:59:23,796 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=52.2 pTM=0.335 ipTM=0.373 tol=5.08
2024-12-07 10:59:30,957 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=53.4 pTM=0.336 ipTM=0.377 tol=3.01
2024-12-07 10:59:38,112 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=53.9 pTM=0.344 ipTM=0.402 tol=1.86
2024-12-07 10:59:45,277 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=53.3 pTM=0.336 ipTM=0.387 tol=4.04
2024-12-07 10:59:52,433 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=53.8 pTM=0.344 ipTM=0.404 tol=3.38
2024-12-07 10:59:59,588 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=53.6 pTM=0.345 ipTM=0.396 tol=1.62
2024-12-07 11:00:06,729 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=53.5 pTM=0.344 ipTM=0.388 tol=2.24
2024-12-07 11:00:13,876 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=53.6 pTM=0.337 ipTM=0.387 tol=1.6
2024-12-07 11:00:21,017 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=53.5 pTM=0.342 ipTM=0.382 tol=2.43
2024-12-07 11:00:28,162 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=53.1 pTM=0.333 ipTM=0.377 tol=2.7
2024-12-07 11:00:35,295 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=53.7 pTM=0.346 ipTM=0.371 tol=2.95
2024-12-07 11:00:42,444 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=53.3 pTM=0.337 ipTM=0.355 tol=1.55
2024-12-07 11:00:49,602 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=53.7 pTM=0.342 ipTM=0.34 tol=1.58
2024-12-07 11:00:56,782 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=53.9 pTM=0.341 ipTM=0.369 tol=2.59
2024-12-07 11:01:03,944 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=53.6 pTM=0.335 ipTM=0.375 tol=2.51
2024-12-07 11:01:11,116 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=53.5 pTM=0.336 ipTM=0.365 tol=1.83
2024-12-07 11:01:18,267 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=53.4 pTM=0.338 ipTM=0.372 tol=1.88
2024-12-07 11:01:25,415 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=53.3 pTM=0.337 ipTM=0.365 tol=1.43
2024-12-07 11:01:32,554 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54 pTM=0.343 ipTM=0.383 tol=1.81
2024-12-07 11:01:39,701 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=53.7 pTM=0.341 ipTM=0.372 tol=2.42
2024-12-07 11:01:46,840 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=53 pTM=0.331 ipTM=0.357 tol=2.38
2024-12-07 11:01:53,984 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=53.6 pTM=0.346 ipTM=0.366 tol=2.44
2024-12-07 11:02:01,124 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=53.1 pTM=0.334 ipTM=0.357 tol=2.26
2024-12-07 11:02:08,272 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=53.7 pTM=0.343 ipTM=0.363 tol=2.09
2024-12-07 11:02:15,417 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.8 pTM=0.365 ipTM=0.364 tol=1.58
2024-12-07 11:02:22,591 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=54.2 pTM=0.351 ipTM=0.389 tol=1.67
2024-12-07 11:02:29,737 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=53 pTM=0.341 ipTM=0.373 tol=4.14
2024-12-07 11:02:36,895 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=53.3 pTM=0.334 ipTM=0.36 tol=2.66
2024-12-07 11:02:44,048 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=53.3 pTM=0.337 ipTM=0.353 tol=2.66
2024-12-07 11:02:44,049 alphafold2_multimer_v3_model_2_seed_000 took 221.7s (30 recycles)
2024-12-07 11:02:51,435 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=50.2 pTM=0.302 ipTM=0.157
2024-12-07 11:02:58,614 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=52.8 pTM=0.319 ipTM=0.347 tol=18.2
2024-12-07 11:03:05,788 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=52.4 pTM=0.317 ipTM=0.351 tol=5.36
2024-12-07 11:03:12,975 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=52.8 pTM=0.321 ipTM=0.369 tol=2.07
2024-12-07 11:03:20,150 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=52.8 pTM=0.322 ipTM=0.381 tol=3.46
2024-12-07 11:03:27,344 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=53.2 pTM=0.327 ipTM=0.394 tol=4.85
2024-12-07 11:03:34,512 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=53.3 pTM=0.329 ipTM=0.398 tol=2.88
2024-12-07 11:03:41,693 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=53.9 pTM=0.334 ipTM=0.405 tol=2.67
2024-12-07 11:03:48,878 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=54.1 pTM=0.343 ipTM=0.422 tol=2.93
2024-12-07 11:03:56,047 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=54.6 pTM=0.338 ipTM=0.417 tol=3.56
2024-12-07 11:04:03,217 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=53.7 pTM=0.34 ipTM=0.418 tol=3.57
2024-12-07 11:04:10,389 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=54.1 pTM=0.341 ipTM=0.423 tol=2.23
2024-12-07 11:04:17,555 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=53.8 pTM=0.34 ipTM=0.42 tol=1.88
2024-12-07 11:04:24,745 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54.1 pTM=0.339 ipTM=0.421 tol=3.08
2024-12-07 11:04:31,912 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=53.9 pTM=0.342 ipTM=0.427 tol=3.62
2024-12-07 11:04:39,087 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=54.2 pTM=0.337 ipTM=0.421 tol=5.18
2024-12-07 11:04:46,255 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53.8 pTM=0.344 ipTM=0.429 tol=3.76
2024-12-07 11:04:53,428 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53.3 pTM=0.338 ipTM=0.421 tol=2.58
2024-12-07 11:05:00,596 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=54 pTM=0.343 ipTM=0.428 tol=2.37
2024-12-07 11:05:07,769 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.3 pTM=0.337 ipTM=0.418 tol=2.67
2024-12-07 11:05:14,934 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53.3 pTM=0.335 ipTM=0.415 tol=2.57
2024-12-07 11:05:22,109 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=53.6 pTM=0.34 ipTM=0.42 tol=2.95
2024-12-07 11:05:29,287 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53.7 pTM=0.334 ipTM=0.41 tol=2.3
2024-12-07 11:05:36,462 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=53.3 pTM=0.335 ipTM=0.414 tol=2.04
2024-12-07 11:05:43,645 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=53.7 pTM=0.336 ipTM=0.417 tol=1.36
2024-12-07 11:05:50,817 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=53.7 pTM=0.336 ipTM=0.411 tol=2.74
2024-12-07 11:05:57,977 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=53.9 pTM=0.336 ipTM=0.414 tol=1.36
2024-12-07 11:06:05,148 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=53.4 pTM=0.335 ipTM=0.411 tol=1.97
2024-12-07 11:06:12,315 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54.2 pTM=0.337 ipTM=0.412 tol=2.5
2024-12-07 11:06:19,475 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53.7 pTM=0.338 ipTM=0.414 tol=1.87
2024-12-07 11:06:26,630 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.1 pTM=0.338 ipTM=0.416 tol=1.93
2024-12-07 11:06:26,631 alphafold2_multimer_v3_model_3_seed_000 took 222.4s (30 recycles)
2024-12-07 11:06:33,994 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=51.9 pTM=0.35 ipTM=0.402
2024-12-07 11:06:41,160 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=52 pTM=0.34 ipTM=0.417 tol=8.07
2024-12-07 11:06:48,308 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=51.1 pTM=0.333 ipTM=0.405 tol=2.78
2024-12-07 11:06:55,461 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=51.5 pTM=0.338 ipTM=0.415 tol=1.66
2024-12-07 11:07:02,610 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=51.2 pTM=0.331 ipTM=0.405 tol=2.28
2024-12-07 11:07:09,767 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=51.6 pTM=0.333 ipTM=0.407 tol=1.44
2024-12-07 11:07:16,924 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=51.2 pTM=0.33 ipTM=0.402 tol=2.12
2024-12-07 11:07:24,080 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=51.5 pTM=0.329 ipTM=0.4 tol=1.7
2024-12-07 11:07:31,229 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=52 pTM=0.331 ipTM=0.4 tol=2.68
2024-12-07 11:07:38,380 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=51.9 pTM=0.333 ipTM=0.406 tol=2.31
2024-12-07 11:07:45,527 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=51.8 pTM=0.333 ipTM=0.403 tol=1.61
2024-12-07 11:07:52,685 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=51.9 pTM=0.333 ipTM=0.405 tol=2.06
2024-12-07 11:07:59,832 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=51.5 pTM=0.331 ipTM=0.403 tol=2.83
2024-12-07 11:08:06,984 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=51.9 pTM=0.334 ipTM=0.405 tol=2.38
2024-12-07 11:08:14,129 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52.1 pTM=0.328 ipTM=0.397 tol=4.7
2024-12-07 11:08:21,280 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=51.6 pTM=0.331 ipTM=0.4 tol=2.05
2024-12-07 11:08:28,426 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=52.2 pTM=0.335 ipTM=0.406 tol=4.45
2024-12-07 11:08:35,579 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=51.8 pTM=0.334 ipTM=0.406 tol=3.34
2024-12-07 11:08:42,721 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=52.3 pTM=0.335 ipTM=0.407 tol=3.3
2024-12-07 11:08:49,865 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=51.2 pTM=0.331 ipTM=0.4 tol=2.35
2024-12-07 11:08:57,008 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=51.5 pTM=0.331 ipTM=0.4 tol=1.95
2024-12-07 11:09:04,157 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=51.2 pTM=0.334 ipTM=0.406 tol=2.5
2024-12-07 11:09:11,290 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=51.5 pTM=0.332 ipTM=0.399 tol=2.01
2024-12-07 11:09:18,431 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=51 pTM=0.329 ipTM=0.398 tol=2.68
2024-12-07 11:09:25,562 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=51.6 pTM=0.331 ipTM=0.401 tol=4.26
2024-12-07 11:09:32,718 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=51.7 pTM=0.328 ipTM=0.397 tol=4.76
2024-12-07 11:09:39,857 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=51.9 pTM=0.334 ipTM=0.405 tol=1.83
2024-12-07 11:09:47,015 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=51.8 pTM=0.332 ipTM=0.4 tol=2.01
2024-12-07 11:09:54,168 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=52.1 pTM=0.329 ipTM=0.394 tol=1.84
2024-12-07 11:10:01,318 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=52 pTM=0.331 ipTM=0.399 tol=2.04
2024-12-07 11:10:08,458 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=52 pTM=0.333 ipTM=0.398 tol=1.89
2024-12-07 11:10:08,459 alphafold2_multimer_v3_model_4_seed_000 took 221.6s (30 recycles)
2024-12-07 11:10:15,846 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=51.5 pTM=0.355 ipTM=0.434
2024-12-07 11:10:23,022 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=50.8 pTM=0.329 ipTM=0.407 tol=8.61
2024-12-07 11:10:30,189 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=51.8 pTM=0.335 ipTM=0.419 tol=6.4
2024-12-07 11:10:37,370 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=51.9 pTM=0.334 ipTM=0.419 tol=3.71
2024-12-07 11:10:44,531 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=51.7 pTM=0.332 ipTM=0.414 tol=2.77
2024-12-07 11:10:51,696 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=52.1 pTM=0.34 ipTM=0.427 tol=2.27
2024-12-07 11:10:58,855 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=51.8 pTM=0.334 ipTM=0.419 tol=4.46
2024-12-07 11:11:06,046 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=51.7 pTM=0.332 ipTM=0.413 tol=6.21
2024-12-07 11:11:13,223 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=52 pTM=0.338 ipTM=0.426 tol=3.77
2024-12-07 11:11:20,409 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=51.8 pTM=0.337 ipTM=0.425 tol=5.9
2024-12-07 11:11:27,579 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=51.9 pTM=0.335 ipTM=0.421 tol=3.86
2024-12-07 11:11:34,747 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=51.9 pTM=0.341 ipTM=0.43 tol=3.91
2024-12-07 11:11:41,906 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=51.8 pTM=0.334 ipTM=0.423 tol=3.9
2024-12-07 11:11:49,073 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=51.9 pTM=0.337 ipTM=0.424 tol=3.89
2024-12-07 11:11:56,239 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=51.8 pTM=0.34 ipTM=0.428 tol=4.96
2024-12-07 11:12:03,413 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=51.8 pTM=0.338 ipTM=0.426 tol=5.13
2024-12-07 11:12:10,569 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=52 pTM=0.342 ipTM=0.432 tol=2.61
2024-12-07 11:12:17,734 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=51.6 pTM=0.339 ipTM=0.427 tol=2.05
2024-12-07 11:12:24,897 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=51.8 pTM=0.339 ipTM=0.427 tol=2.57
2024-12-07 11:12:32,068 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=51.4 pTM=0.337 ipTM=0.424 tol=3.06
2024-12-07 11:12:39,235 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=51.6 pTM=0.335 ipTM=0.422 tol=2.79
2024-12-07 11:12:46,420 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=51.8 pTM=0.341 ipTM=0.432 tol=2.1
2024-12-07 11:12:53,599 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=51.7 pTM=0.335 ipTM=0.422 tol=1.73
2024-12-07 11:13:00,785 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=51.8 pTM=0.333 ipTM=0.419 tol=2.81
2024-12-07 11:13:07,942 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=52 pTM=0.338 ipTM=0.428 tol=3.97
2024-12-07 11:13:15,104 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=51.5 pTM=0.339 ipTM=0.429 tol=4.53
2024-12-07 11:13:22,261 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=51.8 pTM=0.338 ipTM=0.427 tol=5.06
2024-12-07 11:13:29,420 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=51.7 pTM=0.336 ipTM=0.423 tol=2.94
2024-12-07 11:13:36,575 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=51.7 pTM=0.334 ipTM=0.417 tol=2.22
2024-12-07 11:13:43,742 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=51.9 pTM=0.337 ipTM=0.423 tol=2.36
2024-12-07 11:13:50,908 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=51.7 pTM=0.333 ipTM=0.419 tol=2.46
2024-12-07 11:13:50,908 alphafold2_multimer_v3_model_5_seed_000 took 222.2s (30 recycles)
2024-12-07 11:13:51,119 reranking models by 'multimer' metric
2024-12-07 11:13:53,036 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 11:14:24,956 Relaxation took 33.8s
2024-12-07 11:14:24,957 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=54.5 pTM=0.346 ipTM=0.437
2024-12-07 11:14:50,007 Relaxation took 25.1s
2024-12-07 11:14:50,008 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=51.7 pTM=0.333 ipTM=0.419
2024-12-07 11:15:16,096 Relaxation took 26.1s
2024-12-07 11:15:16,096 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.1 pTM=0.338 ipTM=0.416
2024-12-07 11:15:47,536 Relaxation took 31.4s
2024-12-07 11:15:47,536 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=52 pTM=0.333 ipTM=0.398
2024-12-07 11:16:18,293 Relaxation took 30.8s
2024-12-07 11:16:18,293 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=53.3 pTM=0.337 ipTM=0.353
2024-12-07 11:16:19,518 Done