2024-12-07 11:05:11,178 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 11:05:11,481 Running on GPU
2024-12-07 11:05:15,078 Found 6 citations for tools or databases
2024-12-07 11:05:15,078 Query 1/1: PCGF2_PHC1 (length 1348)
2024-12-07 11:05:15,374 Sleeping for 8s. Reason: PENDING
2024-12-07 11:05:23,636 Sleeping for 8s. Reason: RUNNING
2024-12-07 11:05:31,893 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:05:41,149 Sleeping for 7s. Reason: RUNNING
2024-12-07 11:05:48,411 Sleeping for 6s. Reason: RUNNING
2024-12-07 11:05:54,671 Sleeping for 6s. Reason: RUNNING
2024-12-07 11:06:00,924 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:06:11,192 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:06:21,452 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:06:30,715 Sleeping for 7s. Reason: RUNNING
2024-12-07 11:06:37,986 Sleeping for 6s. Reason: RUNNING
2024-12-07 11:06:45,884 Sleeping for 6s. Reason: PENDING
2024-12-07 11:06:52,140 Sleeping for 5s. Reason: RUNNING
2024-12-07 11:06:57,395 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:07:06,652 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:07:16,918 Sleeping for 5s. Reason: RUNNING
2024-12-07 11:07:22,173 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:07:31,433 Sleeping for 8s. Reason: RUNNING
2024-12-07 11:07:39,690 Sleeping for 7s. Reason: RUNNING
2024-12-07 11:07:46,952 Sleeping for 7s. Reason: RUNNING
2024-12-07 11:07:58,043 Setting max_seq=508, max_extra_seq=2048
2024-12-07 11:10:55,645 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=30.2 pTM=0.263 ipTM=0.462
2024-12-07 11:11:44,010 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=31.3 pTM=0.263 ipTM=0.459 tol=16.1
2024-12-07 11:12:32,603 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=31.5 pTM=0.265 ipTM=0.461 tol=11.1
2024-12-07 11:13:21,281 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=31.7 pTM=0.261 ipTM=0.46 tol=10.3
2024-12-07 11:14:09,996 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=31.7 pTM=0.262 ipTM=0.465 tol=7.76
2024-12-07 11:14:58,725 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=31.8 pTM=0.258 ipTM=0.456 tol=6.42
2024-12-07 11:15:47,494 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=31.8 pTM=0.259 ipTM=0.459 tol=5.34
2024-12-07 11:16:36,281 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=31.6 pTM=0.258 ipTM=0.46 tol=7.36
2024-12-07 11:17:25,080 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=31.7 pTM=0.258 ipTM=0.457 tol=6.87
2024-12-07 11:18:13,893 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=31.7 pTM=0.258 ipTM=0.458 tol=6.43
2024-12-07 11:19:02,698 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=31.8 pTM=0.257 ipTM=0.455 tol=8.03
2024-12-07 11:19:51,547 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=31.7 pTM=0.255 ipTM=0.453 tol=8.36
2024-12-07 11:20:40,378 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=31.8 pTM=0.258 ipTM=0.461 tol=13.1
2024-12-07 11:21:29,210 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=31.7 pTM=0.257 ipTM=0.457 tol=9.75
2024-12-07 11:22:18,051 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=31.7 pTM=0.258 ipTM=0.459 tol=9.01
2024-12-07 11:23:06,860 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=31.8 pTM=0.257 ipTM=0.46 tol=5.24
2024-12-07 11:23:55,653 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=31.8 pTM=0.257 ipTM=0.461 tol=5.58
2024-12-07 11:24:44,423 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=31.7 pTM=0.257 ipTM=0.459 tol=4.02
2024-12-07 11:25:33,182 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=31.8 pTM=0.259 ipTM=0.463 tol=5.32
2024-12-07 11:26:21,948 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=31.5 pTM=0.257 ipTM=0.456 tol=6.45
2024-12-07 11:27:10,724 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=31.6 pTM=0.258 ipTM=0.46 tol=5.9
2024-12-07 11:27:59,489 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=31.6 pTM=0.256 ipTM=0.455 tol=4.82
2024-12-07 11:28:48,255 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=31.6 pTM=0.259 ipTM=0.461 tol=4.52
2024-12-07 11:29:37,019 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=31.6 pTM=0.257 ipTM=0.456 tol=4.2
2024-12-07 11:30:25,781 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=31.8 pTM=0.26 ipTM=0.466 tol=4.37
2024-12-07 11:31:14,538 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=31.7 pTM=0.258 ipTM=0.462 tol=3.67
2024-12-07 11:32:03,318 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=31.7 pTM=0.257 ipTM=0.463 tol=4.75
2024-12-07 11:32:52,075 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=31.8 pTM=0.257 ipTM=0.463 tol=4.62
2024-12-07 11:33:40,846 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=31.7 pTM=0.256 ipTM=0.461 tol=5.59
2024-12-07 11:34:29,590 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=31.7 pTM=0.257 ipTM=0.457 tol=4.72
2024-12-07 11:35:18,376 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=31.5 pTM=0.258 ipTM=0.458 tol=17.4
2024-12-07 11:35:18,377 alphafold2_multimer_v3_model_1_seed_000 took 1635.4s (30 recycles)
2024-12-07 11:36:08,077 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=30.7 pTM=0.259 ipTM=0.449
2024-12-07 11:36:56,757 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=33.3 pTM=0.278 ipTM=0.476 tol=20.9
2024-12-07 11:37:45,473 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=33.3 pTM=0.264 ipTM=0.454 tol=17.6
2024-12-07 11:38:34,212 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=34 pTM=0.272 ipTM=0.477 tol=11.4
2024-12-07 11:39:22,943 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=33.7 pTM=0.267 ipTM=0.463 tol=9.27
2024-12-07 11:40:11,696 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=34 pTM=0.265 ipTM=0.46 tol=6.73
2024-12-07 11:41:00,484 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=34 pTM=0.265 ipTM=0.457 tol=5.58
2024-12-07 11:41:49,251 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=34.2 pTM=0.266 ipTM=0.464 tol=11.4
2024-12-07 11:42:38,008 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=34.2 pTM=0.268 ipTM=0.472 tol=13.6
2024-12-07 11:43:26,725 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=34.3 pTM=0.271 ipTM=0.482 tol=8.41
2024-12-07 11:44:15,427 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=34.3 pTM=0.271 ipTM=0.483 tol=4.85
2024-12-07 11:45:04,123 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=34.5 pTM=0.271 ipTM=0.487 tol=5.72
2024-12-07 11:45:52,818 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=34.4 pTM=0.271 ipTM=0.489 tol=4.28
2024-12-07 11:46:41,475 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=34.6 pTM=0.269 ipTM=0.485 tol=11.4
2024-12-07 11:47:30,132 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=34.6 pTM=0.268 ipTM=0.483 tol=11.1
2024-12-07 11:48:18,819 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=34.7 pTM=0.272 ipTM=0.496 tol=7.44
2024-12-07 11:49:07,540 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=34.7 pTM=0.269 ipTM=0.484 tol=11
2024-12-07 11:49:56,296 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=34.6 pTM=0.272 ipTM=0.492 tol=8.85
2024-12-07 11:50:45,017 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=34.4 pTM=0.27 ipTM=0.486 tol=12.1
2024-12-07 11:51:33,770 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=34.3 pTM=0.268 ipTM=0.479 tol=6.47
2024-12-07 11:52:22,526 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=34.4 pTM=0.27 ipTM=0.484 tol=6.38
2024-12-07 11:53:11,320 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=34.3 pTM=0.264 ipTM=0.469 tol=6.57
2024-12-07 11:54:00,127 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=34.2 pTM=0.268 ipTM=0.473 tol=9.58
2024-12-07 11:54:48,914 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=34.6 pTM=0.268 ipTM=0.48 tol=11.9
2024-12-07 11:55:37,709 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=34.5 pTM=0.27 ipTM=0.484 tol=7.51
2024-12-07 11:56:26,491 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=34.5 pTM=0.268 ipTM=0.479 tol=6.75
2024-12-07 11:57:15,279 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=34.4 pTM=0.267 ipTM=0.472 tol=8.34
2024-12-07 11:58:04,084 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=34.5 pTM=0.266 ipTM=0.47 tol=7.11
2024-12-07 11:58:52,874 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=34.3 pTM=0.265 ipTM=0.468 tol=8.03
2024-12-07 11:59:41,664 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=34.5 pTM=0.268 ipTM=0.476 tol=9.84
2024-12-07 12:00:30,410 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=34.2 pTM=0.265 ipTM=0.465 tol=11.3
2024-12-07 12:00:30,412 alphafold2_multimer_v3_model_2_seed_000 took 1510.9s (30 recycles)
2024-12-07 12:01:20,520 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=32.8 pTM=0.257 ipTM=0.459
2024-12-07 12:02:09,665 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=33.2 pTM=0.256 ipTM=0.472 tol=24.4
2024-12-07 12:02:58,904 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=34 pTM=0.256 ipTM=0.472 tol=14.3
2024-12-07 12:03:48,205 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=34.5 pTM=0.26 ipTM=0.479 tol=11.3
2024-12-07 12:04:37,472 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=34.4 pTM=0.261 ipTM=0.485 tol=7.1
2024-12-07 12:05:26,800 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=34.8 pTM=0.258 ipTM=0.48 tol=9.12
2024-12-07 12:06:16,103 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=34.7 pTM=0.259 ipTM=0.477 tol=8.8
2024-12-07 12:07:05,379 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=34.9 pTM=0.26 ipTM=0.479 tol=7.88
2024-12-07 12:07:54,656 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=34.8 pTM=0.262 ipTM=0.485 tol=4.59
2024-12-07 12:08:43,949 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=34.9 pTM=0.265 ipTM=0.494 tol=6.67
2024-12-07 12:09:33,242 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=35.1 pTM=0.266 ipTM=0.496 tol=5.14
2024-12-07 12:10:22,482 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=35.2 pTM=0.268 ipTM=0.502 tol=16.4
2024-12-07 12:11:11,750 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=35.2 pTM=0.273 ipTM=0.517 tol=15.4
2024-12-07 12:12:01,004 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=35.4 pTM=0.28 ipTM=0.537 tol=6.39
2024-12-07 12:12:50,240 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=35.4 pTM=0.281 ipTM=0.542 tol=4.37
2024-12-07 12:13:39,511 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=35.6 pTM=0.289 ipTM=0.566 tol=4.55
2024-12-07 12:14:28,771 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=35.8 pTM=0.292 ipTM=0.576 tol=5.06
2024-12-07 12:15:18,036 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=35.8 pTM=0.295 ipTM=0.586 tol=16.7
2024-12-07 12:16:07,306 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=35.8 pTM=0.295 ipTM=0.585 tol=5.57
2024-12-07 12:16:56,579 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=35.9 pTM=0.299 ipTM=0.596 tol=5.45
2024-12-07 12:17:45,854 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=35.7 pTM=0.296 ipTM=0.586 tol=5.36
2024-12-07 12:18:35,134 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=35.7 pTM=0.297 ipTM=0.591 tol=17.2
2024-12-07 12:19:24,422 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=35.8 pTM=0.298 ipTM=0.594 tol=5.33
2024-12-07 12:20:13,723 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=35.8 pTM=0.299 ipTM=0.598 tol=5.09
2024-12-07 12:21:02,999 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=35.9 pTM=0.3 ipTM=0.603 tol=4.92
2024-12-07 12:21:52,240 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=35.9 pTM=0.301 ipTM=0.605 tol=4.5
2024-12-07 12:22:41,499 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=35.7 pTM=0.299 ipTM=0.601 tol=17
2024-12-07 12:23:30,767 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=35.9 pTM=0.299 ipTM=0.599 tol=16.2
2024-12-07 12:24:20,053 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=35.8 pTM=0.298 ipTM=0.598 tol=5.97
2024-12-07 12:25:09,377 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=35.8 pTM=0.299 ipTM=0.601 tol=4.77
2024-12-07 12:25:58,704 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=35.8 pTM=0.297 ipTM=0.596 tol=4.22
2024-12-07 12:25:58,705 alphafold2_multimer_v3_model_3_seed_000 took 1527.2s (30 recycles)
2024-12-07 12:26:48,761 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=30.8 pTM=0.258 ipTM=0.458
2024-12-07 12:27:37,846 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=31.8 pTM=0.254 ipTM=0.454 tol=24.5
2024-12-07 12:28:26,993 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=31.6 pTM=0.259 ipTM=0.459 tol=21.2
2024-12-07 12:29:16,180 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=32.6 pTM=0.26 ipTM=0.454 tol=19.5
2024-12-07 12:30:05,385 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=32.4 pTM=0.253 ipTM=0.451 tol=10
2024-12-07 12:30:54,629 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=32.6 pTM=0.252 ipTM=0.453 tol=10.9
2024-12-07 12:31:43,882 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=32.5 pTM=0.252 ipTM=0.453 tol=13.5
2024-12-07 12:32:33,103 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=32.7 pTM=0.252 ipTM=0.455 tol=12.9
2024-12-07 12:33:22,354 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=32.7 pTM=0.252 ipTM=0.454 tol=8.18
2024-12-07 12:34:11,578 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=32.8 pTM=0.252 ipTM=0.451 tol=7.53
2024-12-07 12:35:00,781 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=32.9 pTM=0.254 ipTM=0.449 tol=14.5
2024-12-07 12:35:49,955 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=32.8 pTM=0.253 ipTM=0.451 tol=16
2024-12-07 12:36:39,132 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=33 pTM=0.262 ipTM=0.457 tol=10.2
2024-12-07 12:37:28,281 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=33.1 pTM=0.262 ipTM=0.461 tol=9.03
2024-12-07 12:38:17,427 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=33 pTM=0.265 ipTM=0.469 tol=7.25
2024-12-07 12:39:06,578 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=33 pTM=0.261 ipTM=0.464 tol=9.62
2024-12-07 12:39:55,707 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=33.1 pTM=0.268 ipTM=0.472 tol=14.7
2024-12-07 12:40:44,860 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=33.4 pTM=0.27 ipTM=0.466 tol=14.9
2024-12-07 12:41:34,015 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=33.2 pTM=0.271 ipTM=0.461 tol=11.9
2024-12-07 12:42:23,168 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=33 pTM=0.268 ipTM=0.458 tol=17
2024-12-07 12:43:12,303 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=33.2 pTM=0.272 ipTM=0.456 tol=18
2024-12-07 12:44:01,441 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=33.4 pTM=0.278 ipTM=0.474 tol=13.8
2024-12-07 12:44:50,568 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=33.2 pTM=0.276 ipTM=0.465 tol=16.7
2024-12-07 12:45:39,691 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=33.4 pTM=0.275 ipTM=0.465 tol=13.7
2024-12-07 12:46:28,814 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=33.2 pTM=0.277 ipTM=0.464 tol=9.95
2024-12-07 12:47:17,961 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=32.2 pTM=0.279 ipTM=0.473 tol=22.2
2024-12-07 12:48:07,104 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=32.9 pTM=0.273 ipTM=0.461 tol=22.3
2024-12-07 12:48:56,252 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=33.4 pTM=0.278 ipTM=0.47 tol=15.7
2024-12-07 12:49:45,411 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=33.3 pTM=0.275 ipTM=0.464 tol=8.71
2024-12-07 12:50:34,557 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=33.5 pTM=0.278 ipTM=0.474 tol=15.4
2024-12-07 12:51:23,671 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=33.1 pTM=0.273 ipTM=0.46 tol=12.9
2024-12-07 12:51:23,672 alphafold2_multimer_v3_model_4_seed_000 took 1523.9s (30 recycles)
2024-12-07 12:52:13,837 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=31.7 pTM=0.251 ipTM=0.452
2024-12-07 12:53:03,131 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=32.4 pTM=0.25 ipTM=0.45 tol=26.1
2024-12-07 12:53:52,460 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=33.2 pTM=0.254 ipTM=0.469 tol=13.3
2024-12-07 12:54:41,829 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=33.8 pTM=0.256 ipTM=0.483 tol=10.4
2024-12-07 12:55:31,169 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=34.2 pTM=0.256 ipTM=0.486 tol=8.99
2024-12-07 12:56:20,510 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=34.7 pTM=0.256 ipTM=0.492 tol=9.45
2024-12-07 12:57:09,823 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=34.5 pTM=0.259 ipTM=0.497 tol=7.47
2024-12-07 12:57:59,166 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=34.8 pTM=0.259 ipTM=0.498 tol=6.18
2024-12-07 12:58:48,546 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=34.7 pTM=0.26 ipTM=0.498 tol=4.4
2024-12-07 12:59:37,944 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=34.9 pTM=0.261 ipTM=0.503 tol=4.8
2024-12-07 13:00:27,330 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=34.9 pTM=0.259 ipTM=0.496 tol=5.28
2024-12-07 13:01:16,735 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=34.8 pTM=0.259 ipTM=0.498 tol=6.06
2024-12-07 13:02:06,124 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=34.9 pTM=0.263 ipTM=0.505 tol=4.99
2024-12-07 13:02:55,459 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=34.9 pTM=0.263 ipTM=0.508 tol=8.7
2024-12-07 13:03:44,801 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=34.8 pTM=0.262 ipTM=0.507 tol=19.1
2024-12-07 13:04:34,105 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=34.8 pTM=0.262 ipTM=0.505 tol=11.3
2024-12-07 13:05:23,440 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=34.9 pTM=0.265 ipTM=0.512 tol=18.5
2024-12-07 13:06:12,808 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=34.8 pTM=0.26 ipTM=0.502 tol=10.4
2024-12-07 13:07:02,160 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=34.8 pTM=0.258 ipTM=0.493 tol=5.68
2024-12-07 13:07:51,518 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=34.7 pTM=0.256 ipTM=0.487 tol=17.3
2024-12-07 13:08:40,880 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=34.6 pTM=0.26 ipTM=0.494 tol=18.3
2024-12-07 13:09:30,257 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=34.6 pTM=0.26 ipTM=0.5 tol=18.5
2024-12-07 13:10:19,622 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=34.7 pTM=0.263 ipTM=0.508 tol=17.7
2024-12-07 13:11:08,978 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=34.7 pTM=0.263 ipTM=0.505 tol=17.2
2024-12-07 13:11:58,325 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=34.8 pTM=0.265 ipTM=0.509 tol=7.57
2024-12-07 13:12:47,642 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=34.8 pTM=0.265 ipTM=0.509 tol=19
2024-12-07 13:13:37,007 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=34.8 pTM=0.265 ipTM=0.509 tol=8.64
2024-12-07 13:14:26,362 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=34.9 pTM=0.264 ipTM=0.508 tol=7.8
2024-12-07 13:15:15,709 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=34.9 pTM=0.265 ipTM=0.513 tol=6.63
2024-12-07 13:16:05,097 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=34.9 pTM=0.267 ipTM=0.516 tol=18.4
2024-12-07 13:16:54,488 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=34.7 pTM=0.264 ipTM=0.506 tol=7.62
2024-12-07 13:16:54,489 alphafold2_multimer_v3_model_5_seed_000 took 1529.7s (30 recycles)
2024-12-07 13:16:55,592 reranking models by 'multimer' metric
2024-12-07 13:16:58,894 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 13:19:08,097 Relaxation took 132.5s
2024-12-07 13:19:08,097 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=35.8 pTM=0.297 ipTM=0.596
2024-12-07 13:21:56,274 Relaxation took 168.2s
2024-12-07 13:21:56,274 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=34.7 pTM=0.264 ipTM=0.506
2024-12-07 13:24:34,949 Relaxation took 158.7s
2024-12-07 13:24:34,950 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=34.2 pTM=0.265 ipTM=0.465
2024-12-07 13:27:49,543 Relaxation took 194.6s
2024-12-07 13:27:49,543 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=33.1 pTM=0.273 ipTM=0.46
2024-12-07 13:29:53,351 Relaxation took 123.8s
2024-12-07 13:29:53,351 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=31.5 pTM=0.258 ipTM=0.458
2024-12-07 13:29:56,029 Done