2024-12-07 11:07:33,668 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 11:07:33,976 Running on GPU
2024-12-07 11:07:37,403 Found 6 citations for tools or databases
2024-12-07 11:07:37,403 Query 1/1: PCGF2_SCMH1 (length 1004)
2024-12-07 11:07:37,717 Sleeping for 5s. Reason: PENDING
2024-12-07 11:07:42,975 Sleeping for 7s. Reason: RUNNING
2024-12-07 11:07:50,236 Sleeping for 6s. Reason: RUNNING
2024-12-07 11:07:56,492 Sleeping for 7s. Reason: RUNNING
2024-12-07 11:08:03,750 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:08:14,006 Sleeping for 8s. Reason: RUNNING
2024-12-07 11:08:22,261 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:08:31,520 Sleeping for 5s. Reason: RUNNING
2024-12-07 11:08:36,773 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:08:47,041 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:08:57,299 Sleeping for 5s. Reason: RUNNING
2024-12-07 11:09:02,558 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:09:11,824 Sleeping for 5s. Reason: RUNNING
2024-12-07 11:09:17,088 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:09:26,361 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:09:38,261 Sleeping for 6s. Reason: PENDING
2024-12-07 11:09:44,519 Sleeping for 7s. Reason: RUNNING
2024-12-07 11:09:51,780 Sleeping for 6s. Reason: RUNNING
2024-12-07 11:09:58,035 Sleeping for 8s. Reason: RUNNING
2024-12-07 11:10:06,293 Sleeping for 6s. Reason: RUNNING
2024-12-07 11:10:12,551 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:10:21,806 Sleeping for 8s. Reason: RUNNING
2024-12-07 11:10:30,064 Sleeping for 6s. Reason: RUNNING
2024-12-07 11:10:36,328 Sleeping for 5s. Reason: RUNNING
2024-12-07 11:10:41,582 Sleeping for 6s. Reason: RUNNING
2024-12-07 11:10:47,835 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:10:58,099 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:11:07,354 Sleeping for 5s. Reason: RUNNING
2024-12-07 11:11:15,897 Setting max_seq=508, max_extra_seq=2048
2024-12-07 11:13:43,127 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=53.9 pTM=0.328 ipTM=0.186
2024-12-07 11:14:04,821 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=54.5 pTM=0.32 ipTM=0.166 tol=16.6
2024-12-07 11:14:26,560 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=55.3 pTM=0.321 ipTM=0.172 tol=8.13
2024-12-07 11:14:48,341 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=56.1 pTM=0.321 ipTM=0.17 tol=7.89
2024-12-07 11:15:10,163 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=56.1 pTM=0.323 ipTM=0.176 tol=6.2
2024-12-07 11:15:32,001 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=56.1 pTM=0.322 ipTM=0.174 tol=3.99
2024-12-07 11:15:53,861 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=55.8 pTM=0.323 ipTM=0.177 tol=3.65
2024-12-07 11:16:15,719 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=56.1 pTM=0.323 ipTM=0.175 tol=2.81
2024-12-07 11:16:37,602 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=56.1 pTM=0.323 ipTM=0.176 tol=2.02
2024-12-07 11:16:59,496 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=56 pTM=0.323 ipTM=0.176 tol=1.94
2024-12-07 11:17:21,377 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=56.1 pTM=0.321 ipTM=0.171 tol=1.46
2024-12-07 11:17:43,271 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=56 pTM=0.322 ipTM=0.174 tol=2.21
2024-12-07 11:18:05,170 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56 pTM=0.323 ipTM=0.178 tol=1.94
2024-12-07 11:18:27,095 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.1 pTM=0.322 ipTM=0.175 tol=4.74
2024-12-07 11:18:49,008 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=56 pTM=0.323 ipTM=0.177 tol=4.8
2024-12-07 11:19:10,945 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=55.9 pTM=0.323 ipTM=0.174 tol=4.35
2024-12-07 11:19:32,866 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=56.2 pTM=0.323 ipTM=0.176 tol=4.52
2024-12-07 11:19:54,784 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=56 pTM=0.323 ipTM=0.174 tol=5.66
2024-12-07 11:20:16,702 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=56 pTM=0.323 ipTM=0.177 tol=6.07
2024-12-07 11:20:38,616 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=55.9 pTM=0.323 ipTM=0.175 tol=5.97
2024-12-07 11:21:00,536 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=55.8 pTM=0.321 ipTM=0.173 tol=5.34
2024-12-07 11:21:22,452 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=55.9 pTM=0.322 ipTM=0.175 tol=4.91
2024-12-07 11:21:44,369 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=56 pTM=0.322 ipTM=0.174 tol=6.12
2024-12-07 11:22:06,294 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=56.1 pTM=0.322 ipTM=0.174 tol=4.4
2024-12-07 11:22:28,220 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=56 pTM=0.323 ipTM=0.174 tol=2.82
2024-12-07 11:22:50,159 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=56.3 pTM=0.323 ipTM=0.177 tol=2.89
2024-12-07 11:23:12,075 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=56.3 pTM=0.323 ipTM=0.177 tol=1.91
2024-12-07 11:23:34,006 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=56.3 pTM=0.323 ipTM=0.175 tol=1.73
2024-12-07 11:23:55,945 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=56.2 pTM=0.321 ipTM=0.171 tol=1.32
2024-12-07 11:24:17,889 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=56.3 pTM=0.322 ipTM=0.173 tol=1.81
2024-12-07 11:24:39,831 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=56.2 pTM=0.322 ipTM=0.173 tol=1.63
2024-12-07 11:24:39,832 alphafold2_multimer_v3_model_1_seed_000 took 798.9s (30 recycles)
2024-12-07 11:25:02,412 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=57.1 pTM=0.324 ipTM=0.178
2024-12-07 11:25:24,433 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=58.3 pTM=0.32 ipTM=0.164 tol=8.92
2024-12-07 11:25:46,474 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=59.1 pTM=0.318 ipTM=0.163 tol=5.87
2024-12-07 11:26:08,500 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=59.2 pTM=0.317 ipTM=0.159 tol=4.23
2024-12-07 11:26:30,533 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=59.1 pTM=0.317 ipTM=0.161 tol=3.15
2024-12-07 11:26:52,548 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=59 pTM=0.317 ipTM=0.163 tol=2.23
2024-12-07 11:27:14,571 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=58.8 pTM=0.318 ipTM=0.165 tol=2.61
2024-12-07 11:27:36,625 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=59 pTM=0.321 ipTM=0.173 tol=3.71
2024-12-07 11:27:58,665 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=59.3 pTM=0.331 ipTM=0.204 tol=5.38
2024-12-07 11:28:20,699 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=60.1 pTM=0.351 ipTM=0.308 tol=4.02
2024-12-07 11:28:42,719 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=60 pTM=0.344 ipTM=0.29 tol=2.43
2024-12-07 11:29:04,748 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=59.8 pTM=0.343 ipTM=0.279 tol=2.81
2024-12-07 11:29:26,768 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=59.8 pTM=0.342 ipTM=0.275 tol=5.14
2024-12-07 11:29:48,791 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=59.9 pTM=0.343 ipTM=0.281 tol=5.49
2024-12-07 11:30:10,810 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=60 pTM=0.344 ipTM=0.281 tol=2.39
2024-12-07 11:30:32,793 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=59.8 pTM=0.341 ipTM=0.274 tol=1.32
2024-12-07 11:30:54,799 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=59.9 pTM=0.344 ipTM=0.272 tol=1.72
2024-12-07 11:31:16,808 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=59.8 pTM=0.343 ipTM=0.268 tol=1.84
2024-12-07 11:31:38,829 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=59.8 pTM=0.344 ipTM=0.276 tol=1.4
2024-12-07 11:32:00,850 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=60 pTM=0.344 ipTM=0.281 tol=2.29
2024-12-07 11:32:22,873 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=59.8 pTM=0.342 ipTM=0.28 tol=2.46
2024-12-07 11:32:44,883 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=59.8 pTM=0.341 ipTM=0.278 tol=2.73
2024-12-07 11:33:06,911 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=59.9 pTM=0.345 ipTM=0.279 tol=3.99
2024-12-07 11:33:28,913 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=60 pTM=0.346 ipTM=0.282 tol=3.92
2024-12-07 11:33:50,928 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=60 pTM=0.348 ipTM=0.287 tol=2.17
2024-12-07 11:34:12,926 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=60.1 pTM=0.348 ipTM=0.282 tol=1.81
2024-12-07 11:34:34,934 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60 pTM=0.352 ipTM=0.288 tol=3.22
2024-12-07 11:34:56,924 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=59.9 pTM=0.35 ipTM=0.285 tol=1.74
2024-12-07 11:35:18,939 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=60 pTM=0.351 ipTM=0.281 tol=2.22
2024-12-07 11:35:40,931 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=60 pTM=0.35 ipTM=0.287 tol=2.04
2024-12-07 11:36:02,932 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=59.9 pTM=0.345 ipTM=0.27 tol=2.75
2024-12-07 11:36:02,932 alphafold2_multimer_v3_model_2_seed_000 took 682.5s (30 recycles)
2024-12-07 11:36:25,660 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=55.6 pTM=0.312 ipTM=0.145
2024-12-07 11:36:47,757 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=57.4 pTM=0.312 ipTM=0.144 tol=13.7
2024-12-07 11:37:09,847 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=57.2 pTM=0.314 ipTM=0.147 tol=6
2024-12-07 11:37:31,909 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=57.9 pTM=0.315 ipTM=0.147 tol=6.56
2024-12-07 11:37:53,991 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=58.1 pTM=0.316 ipTM=0.148 tol=5.36
2024-12-07 11:38:16,054 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=58.2 pTM=0.319 ipTM=0.153 tol=5.4
2024-12-07 11:38:38,099 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=58.5 pTM=0.32 ipTM=0.155 tol=4.6
2024-12-07 11:39:00,152 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=58.5 pTM=0.321 ipTM=0.157 tol=4.69
2024-12-07 11:39:22,191 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=58.6 pTM=0.321 ipTM=0.157 tol=6.53
2024-12-07 11:39:44,239 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=58.6 pTM=0.322 ipTM=0.159 tol=8.67
2024-12-07 11:40:06,301 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=58.6 pTM=0.319 ipTM=0.154 tol=9.73
2024-12-07 11:40:28,386 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=58.5 pTM=0.322 ipTM=0.162 tol=4.68
2024-12-07 11:40:50,478 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=58.9 pTM=0.32 ipTM=0.155 tol=6.88
2024-12-07 11:41:12,573 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=58.9 pTM=0.321 ipTM=0.159 tol=5.26
2024-12-07 11:41:34,642 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=58.9 pTM=0.323 ipTM=0.165 tol=2.08
2024-12-07 11:41:56,721 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=59 pTM=0.323 ipTM=0.166 tol=4.38
2024-12-07 11:42:18,780 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=59 pTM=0.329 ipTM=0.186 tol=2.24
2024-12-07 11:42:40,854 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=58.9 pTM=0.323 ipTM=0.166 tol=7.21
2024-12-07 11:43:02,902 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=59.2 pTM=0.335 ipTM=0.21 tol=4.75
2024-12-07 11:43:24,953 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=59 pTM=0.331 ipTM=0.197 tol=9.02
2024-12-07 11:43:46,995 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=58.9 pTM=0.333 ipTM=0.207 tol=3.57
2024-12-07 11:44:09,029 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=58.9 pTM=0.334 ipTM=0.208 tol=2.48
2024-12-07 11:44:31,061 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=59.3 pTM=0.351 ipTM=0.256 tol=2.58
2024-12-07 11:44:53,073 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=59.6 pTM=0.368 ipTM=0.299 tol=3.93
2024-12-07 11:45:15,115 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=59.5 pTM=0.363 ipTM=0.284 tol=3.92
2024-12-07 11:45:37,156 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=59.7 pTM=0.378 ipTM=0.329 tol=2.81
2024-12-07 11:45:59,207 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=59.8 pTM=0.382 ipTM=0.336 tol=2.09
2024-12-07 11:46:21,239 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60 pTM=0.393 ipTM=0.367 tol=5.32
2024-12-07 11:46:43,292 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60 pTM=0.396 ipTM=0.379 tol=4.24
2024-12-07 11:47:05,335 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60 pTM=0.396 ipTM=0.381 tol=4.84
2024-12-07 11:47:27,366 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.1 pTM=0.402 ipTM=0.398 tol=3.68
2024-12-07 11:47:27,367 alphafold2_multimer_v3_model_3_seed_000 took 683.8s (30 recycles)
2024-12-07 11:47:49,998 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=53.6 pTM=0.337 ipTM=0.21
2024-12-07 11:48:12,075 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=54.9 pTM=0.32 ipTM=0.184 tol=16.1
2024-12-07 11:48:34,212 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=56.2 pTM=0.315 ipTM=0.17 tol=17.4
2024-12-07 11:48:56,325 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=56.6 pTM=0.315 ipTM=0.158 tol=6.42
2024-12-07 11:49:18,446 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=56.5 pTM=0.314 ipTM=0.159 tol=6.5
2024-12-07 11:49:40,568 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=56.8 pTM=0.312 ipTM=0.15 tol=4.34
2024-12-07 11:50:02,696 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56.2 pTM=0.314 ipTM=0.153 tol=6.22
2024-12-07 11:50:24,812 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=56.5 pTM=0.314 ipTM=0.152 tol=5.32
2024-12-07 11:50:46,911 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=56.2 pTM=0.314 ipTM=0.153 tol=6.68
2024-12-07 11:51:08,995 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=56.6 pTM=0.315 ipTM=0.153 tol=5.32
2024-12-07 11:51:31,079 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=56.3 pTM=0.315 ipTM=0.156 tol=5.26
2024-12-07 11:51:53,161 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=56.4 pTM=0.315 ipTM=0.153 tol=4.73
2024-12-07 11:52:15,244 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=56.4 pTM=0.316 ipTM=0.157 tol=5.11
2024-12-07 11:52:37,352 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=56.9 pTM=0.314 ipTM=0.153 tol=7.55
2024-12-07 11:52:59,443 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=56.5 pTM=0.316 ipTM=0.157 tol=5.94
2024-12-07 11:53:21,532 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=56.3 pTM=0.315 ipTM=0.155 tol=5.34
2024-12-07 11:53:43,656 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=56.3 pTM=0.314 ipTM=0.155 tol=3.56
2024-12-07 11:54:05,772 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=56.6 pTM=0.315 ipTM=0.154 tol=4.18
2024-12-07 11:54:27,890 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=56.2 pTM=0.317 ipTM=0.16 tol=5.27
2024-12-07 11:54:49,977 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=56.5 pTM=0.316 ipTM=0.156 tol=5.29
2024-12-07 11:55:12,067 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=56.2 pTM=0.316 ipTM=0.16 tol=4.24
2024-12-07 11:55:34,184 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=56.2 pTM=0.315 ipTM=0.155 tol=3.44
2024-12-07 11:55:56,272 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=56.5 pTM=0.318 ipTM=0.16 tol=3.14
2024-12-07 11:56:18,359 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=56.6 pTM=0.316 ipTM=0.155 tol=2.26
2024-12-07 11:56:40,465 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=56.2 pTM=0.318 ipTM=0.161 tol=2.81
2024-12-07 11:57:02,563 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=56.6 pTM=0.316 ipTM=0.155 tol=3.9
2024-12-07 11:57:24,653 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=56.3 pTM=0.317 ipTM=0.159 tol=2.63
2024-12-07 11:57:46,743 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=56.5 pTM=0.317 ipTM=0.156 tol=3.23
2024-12-07 11:58:08,830 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=56.2 pTM=0.317 ipTM=0.159 tol=2.59
2024-12-07 11:58:30,918 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=56.2 pTM=0.315 ipTM=0.154 tol=2.74
2024-12-07 11:58:53,016 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=56.3 pTM=0.316 ipTM=0.155 tol=2.46
2024-12-07 11:58:53,017 alphafold2_multimer_v3_model_4_seed_000 took 685.0s (30 recycles)
2024-12-07 11:59:15,758 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=54.2 pTM=0.324 ipTM=0.186
2024-12-07 11:59:37,835 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=56.8 pTM=0.323 ipTM=0.17 tol=18.3
2024-12-07 11:59:59,963 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=56.8 pTM=0.32 ipTM=0.156 tol=7.5
2024-12-07 12:00:22,101 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=57.3 pTM=0.32 ipTM=0.152 tol=8
2024-12-07 12:00:44,239 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=57.4 pTM=0.318 ipTM=0.149 tol=8.44
2024-12-07 12:01:06,376 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=57.4 pTM=0.317 ipTM=0.149 tol=6.77
2024-12-07 12:01:28,502 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=57.6 pTM=0.317 ipTM=0.149 tol=6.15
2024-12-07 12:01:50,632 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=57.7 pTM=0.318 ipTM=0.148 tol=6.01
2024-12-07 12:02:12,764 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=57.7 pTM=0.317 ipTM=0.148 tol=6.05
2024-12-07 12:02:34,928 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=57.4 pTM=0.316 ipTM=0.146 tol=6.83
2024-12-07 12:02:57,065 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=57.5 pTM=0.317 ipTM=0.146 tol=4.59
2024-12-07 12:03:19,215 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=57.6 pTM=0.315 ipTM=0.145 tol=3.34
2024-12-07 12:03:41,357 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=57.7 pTM=0.316 ipTM=0.146 tol=2.16
2024-12-07 12:04:03,509 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=57.8 pTM=0.317 ipTM=0.148 tol=9.01
2024-12-07 12:04:25,650 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=57.7 pTM=0.316 ipTM=0.144 tol=7.52
2024-12-07 12:04:47,788 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=57.7 pTM=0.316 ipTM=0.145 tol=5.35
2024-12-07 12:05:09,919 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=57.6 pTM=0.315 ipTM=0.143 tol=5.35
2024-12-07 12:05:32,031 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=57.6 pTM=0.316 ipTM=0.144 tol=1.97
2024-12-07 12:05:54,153 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=57.8 pTM=0.315 ipTM=0.143 tol=3.65
2024-12-07 12:06:16,259 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=57.6 pTM=0.316 ipTM=0.144 tol=2.5
2024-12-07 12:06:38,387 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=57.6 pTM=0.316 ipTM=0.143 tol=1.63
2024-12-07 12:07:00,512 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=57.5 pTM=0.316 ipTM=0.145 tol=2.61
2024-12-07 12:07:22,636 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=57.9 pTM=0.316 ipTM=0.145 tol=3.69
2024-12-07 12:07:44,748 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=57.7 pTM=0.316 ipTM=0.144 tol=4.41
2024-12-07 12:08:06,839 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=57.6 pTM=0.316 ipTM=0.144 tol=4.24
2024-12-07 12:08:28,951 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=57.7 pTM=0.316 ipTM=0.144 tol=4.96
2024-12-07 12:08:51,054 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=57.7 pTM=0.316 ipTM=0.145 tol=5.5
2024-12-07 12:09:13,159 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=57.6 pTM=0.317 ipTM=0.147 tol=4.69
2024-12-07 12:09:35,268 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=57.6 pTM=0.316 ipTM=0.146 tol=3.7
2024-12-07 12:09:57,393 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=57.7 pTM=0.316 ipTM=0.146 tol=4.03
2024-12-07 12:10:19,516 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=57.8 pTM=0.316 ipTM=0.145 tol=3.08
2024-12-07 12:10:19,517 alphafold2_multimer_v3_model_5_seed_000 took 685.9s (30 recycles)
2024-12-07 12:10:20,141 reranking models by 'multimer' metric
2024-12-07 12:10:23,439 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 12:11:40,609 Relaxation took 80.5s
2024-12-07 12:11:40,609 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.1 pTM=0.402 ipTM=0.398
2024-12-07 12:13:22,259 Relaxation took 101.6s
2024-12-07 12:13:22,259 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=59.9 pTM=0.345 ipTM=0.27
2024-12-07 12:14:47,652 Relaxation took 85.4s
2024-12-07 12:14:47,652 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=56.2 pTM=0.322 ipTM=0.173
2024-12-07 12:16:13,362 Relaxation took 85.7s
2024-12-07 12:16:13,362 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=56.3 pTM=0.316 ipTM=0.155
2024-12-07 12:17:45,341 Relaxation took 92.0s
2024-12-07 12:17:45,341 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=57.8 pTM=0.316 ipTM=0.145
2024-12-07 12:17:47,137 Done