2024-12-07 11:09:43,670 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 11:09:43,973 Running on GPU
2024-12-07 11:09:46,985 Found 6 citations for tools or databases
2024-12-07 11:09:46,985 Query 1/1: PDZRN3_DYNLL2 (length 1155)
2024-12-07 11:09:47,276 Sleeping for 8s. Reason: PENDING
2024-12-07 11:09:55,548 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:10:05,813 Sleeping for 7s. Reason: RUNNING
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2024-12-07 11:10:34,858 Sleeping for 5s. Reason: RUNNING
2024-12-07 11:10:40,115 Sleeping for 7s. Reason: RUNNING
2024-12-07 11:10:47,385 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:10:57,644 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:11:06,900 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:11:17,155 Sleeping for 8s. Reason: RUNNING
2024-12-07 11:11:25,408 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:11:35,663 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:11:44,920 Sleeping for 5s. Reason: RUNNING
2024-12-07 11:11:50,178 Sleeping for 5s. Reason: RUNNING
2024-12-07 11:11:55,433 Sleeping for 6s. Reason: RUNNING
2024-12-07 11:12:01,692 Sleeping for 7s. Reason: RUNNING
2024-12-07 11:12:08,946 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:12:18,200 Sleeping for 8s. Reason: RUNNING
2024-12-07 11:12:26,461 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:12:35,726 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:12:44,982 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:12:54,241 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:13:03,503 Sleeping for 6s. Reason: RUNNING
2024-12-07 11:13:09,757 Sleeping for 7s. Reason: RUNNING
2024-12-07 11:13:17,017 Sleeping for 7s. Reason: RUNNING
2024-12-07 11:13:24,271 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:13:35,875 Sleeping for 7s. Reason: PENDING
2024-12-07 11:13:43,134 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:13:52,388 Sleeping for 5s. Reason: RUNNING
2024-12-07 11:13:57,648 Sleeping for 7s. Reason: RUNNING
2024-12-07 11:14:04,907 Sleeping for 6s. Reason: RUNNING
2024-12-07 11:14:11,170 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:14:21,435 Sleeping for 5s. Reason: RUNNING
2024-12-07 11:14:26,684 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:14:36,946 Sleeping for 6s. Reason: RUNNING
2024-12-07 11:14:43,211 Sleeping for 5s. Reason: RUNNING
2024-12-07 11:14:48,464 Sleeping for 8s. Reason: RUNNING
2024-12-07 11:14:56,715 Sleeping for 5s. Reason: RUNNING
2024-12-07 11:15:01,971 Sleeping for 8s. Reason: RUNNING
2024-12-07 11:15:10,224 Sleeping for 7s. Reason: RUNNING
2024-12-07 11:15:22,472 Setting max_seq=508, max_extra_seq=2048
2024-12-07 11:18:31,279 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=46.8 pTM=0.253 ipTM=0.277
2024-12-07 11:19:02,940 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=48.1 pTM=0.25 ipTM=0.269 tol=14.6
2024-12-07 11:19:34,756 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=48.5 pTM=0.249 ipTM=0.283 tol=6.78
2024-12-07 11:20:06,699 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=48.7 pTM=0.247 ipTM=0.299 tol=5.66
2024-12-07 11:20:38,720 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=48.1 pTM=0.245 ipTM=0.4 tol=4.92
2024-12-07 11:21:10,804 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=48.4 pTM=0.245 ipTM=0.507 tol=4.84
2024-12-07 11:21:42,875 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=49.1 pTM=0.244 ipTM=0.548 tol=6.62
2024-12-07 11:22:14,993 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=49 pTM=0.245 ipTM=0.404 tol=5.63
2024-12-07 11:22:47,097 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=48.7 pTM=0.245 ipTM=0.31 tol=4.81
2024-12-07 11:23:19,216 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=48.6 pTM=0.246 ipTM=0.511 tol=5.18
2024-12-07 11:23:51,381 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=49 pTM=0.245 ipTM=0.381 tol=3.05
2024-12-07 11:24:23,538 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=49.1 pTM=0.246 ipTM=0.435 tol=3
2024-12-07 11:24:55,735 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=49.1 pTM=0.246 ipTM=0.494 tol=2.84
2024-12-07 11:25:27,957 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=49 pTM=0.246 ipTM=0.463 tol=2.01
2024-12-07 11:26:00,135 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=49.3 pTM=0.245 ipTM=0.413 tol=1.71
2024-12-07 11:26:32,272 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=49 pTM=0.245 ipTM=0.501 tol=2.71
2024-12-07 11:27:04,386 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=49.2 pTM=0.246 ipTM=0.477 tol=2.72
2024-12-07 11:27:36,487 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=49.2 pTM=0.246 ipTM=0.471 tol=2.26
2024-12-07 11:28:08,556 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=49.3 pTM=0.245 ipTM=0.535 tol=2.05
2024-12-07 11:28:40,616 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=49.4 pTM=0.245 ipTM=0.563 tol=1.58
2024-12-07 11:29:12,682 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=49.3 pTM=0.244 ipTM=0.614 tol=1.88
2024-12-07 11:29:44,745 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=49.2 pTM=0.245 ipTM=0.55 tol=3
2024-12-07 11:30:16,799 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=49.3 pTM=0.245 ipTM=0.566 tol=1.85
2024-12-07 11:30:48,827 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=49.2 pTM=0.245 ipTM=0.548 tol=1.81
2024-12-07 11:31:20,889 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=48.8 pTM=0.245 ipTM=0.44 tol=1.84
2024-12-07 11:31:52,943 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=49.1 pTM=0.246 ipTM=0.489 tol=2.16
2024-12-07 11:32:24,983 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=49.1 pTM=0.245 ipTM=0.534 tol=4.5
2024-12-07 11:32:57,029 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=49.2 pTM=0.245 ipTM=0.56 tol=4.2
2024-12-07 11:33:29,055 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=48.9 pTM=0.245 ipTM=0.517 tol=4.45
2024-12-07 11:34:01,068 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=49.1 pTM=0.246 ipTM=0.481 tol=4.88
2024-12-07 11:34:33,157 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=49.2 pTM=0.247 ipTM=0.55 tol=2.36
2024-12-07 11:34:33,158 alphafold2_multimer_v3_model_1_seed_000 took 1145.7s (30 recycles)
2024-12-07 11:35:06,048 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=46.9 pTM=0.26 ipTM=0.212
2024-12-07 11:35:38,186 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=49.2 pTM=0.258 ipTM=0.203 tol=11
2024-12-07 11:36:10,358 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=50 pTM=0.255 ipTM=0.188 tol=11.4
2024-12-07 11:36:42,520 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=49.9 pTM=0.253 ipTM=0.582 tol=11
2024-12-07 11:37:14,663 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=50.1 pTM=0.252 ipTM=0.295 tol=6.45
2024-12-07 11:37:46,808 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=50.4 pTM=0.251 ipTM=0.223 tol=4.64
2024-12-07 11:38:18,962 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=50.2 pTM=0.252 ipTM=0.361 tol=4.55
2024-12-07 11:38:51,108 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=50.3 pTM=0.254 ipTM=0.328 tol=4.96
2024-12-07 11:39:23,247 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=50.3 pTM=0.254 ipTM=0.337 tol=4.06
2024-12-07 11:39:55,407 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=50.6 pTM=0.252 ipTM=0.495 tol=3.36
2024-12-07 11:40:27,589 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=50.7 pTM=0.253 ipTM=0.336 tol=3.31
2024-12-07 11:40:59,758 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=50.4 pTM=0.253 ipTM=0.352 tol=1.85
2024-12-07 11:41:31,946 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=50.4 pTM=0.252 ipTM=0.305 tol=2.71
2024-12-07 11:42:04,127 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=50.3 pTM=0.254 ipTM=0.262 tol=2.21
2024-12-07 11:42:36,335 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=50.4 pTM=0.252 ipTM=0.306 tol=2.98
2024-12-07 11:43:08,523 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=50.2 pTM=0.252 ipTM=0.297 tol=2.44
2024-12-07 11:43:40,748 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=50.3 pTM=0.253 ipTM=0.282 tol=2.28
2024-12-07 11:44:12,960 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=50.2 pTM=0.252 ipTM=0.304 tol=1.66
2024-12-07 11:44:45,174 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=50.5 pTM=0.25 ipTM=0.31 tol=1.96
2024-12-07 11:45:17,421 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=50.5 pTM=0.251 ipTM=0.267 tol=2.3
2024-12-07 11:45:49,669 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=50.6 pTM=0.251 ipTM=0.297 tol=2.38
2024-12-07 11:46:21,911 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=50.5 pTM=0.252 ipTM=0.328 tol=2.22
2024-12-07 11:46:54,154 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=50.8 pTM=0.252 ipTM=0.315 tol=1.4
2024-12-07 11:47:26,384 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=50.6 pTM=0.252 ipTM=0.401 tol=1.56
2024-12-07 11:47:58,585 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=50.5 pTM=0.252 ipTM=0.373 tol=1.74
2024-12-07 11:48:30,789 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=50.6 pTM=0.251 ipTM=0.297 tol=1.87
2024-12-07 11:49:02,988 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=50.4 pTM=0.252 ipTM=0.32 tol=1.54
2024-12-07 11:49:35,185 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=50.5 pTM=0.251 ipTM=0.283 tol=1.62
2024-12-07 11:50:07,359 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=50.3 pTM=0.252 ipTM=0.246 tol=1.98
2024-12-07 11:50:39,537 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=50.4 pTM=0.252 ipTM=0.241 tol=1.52
2024-12-07 11:51:11,693 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=50.4 pTM=0.252 ipTM=0.225 tol=1.82
2024-12-07 11:51:11,694 alphafold2_multimer_v3_model_2_seed_000 took 997.7s (30 recycles)
2024-12-07 11:51:44,723 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=46.6 pTM=0.249 ipTM=0.301
2024-12-07 11:52:17,009 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=48.6 pTM=0.256 ipTM=0.293 tol=16.4
2024-12-07 11:52:49,282 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=49.1 pTM=0.258 ipTM=0.366 tol=9.82
2024-12-07 11:53:21,555 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=49.8 pTM=0.257 ipTM=0.269 tol=5.89
2024-12-07 11:53:53,845 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=49.4 pTM=0.258 ipTM=0.268 tol=9.57
2024-12-07 11:54:26,082 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=49.4 pTM=0.257 ipTM=0.31 tol=8.58
2024-12-07 11:54:58,349 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=49.9 pTM=0.259 ipTM=0.749 tol=9.05
2024-12-07 11:55:30,630 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=50.3 pTM=0.26 ipTM=0.691 tol=7.56
2024-12-07 11:56:02,927 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=51 pTM=0.263 ipTM=0.756 tol=7.66
2024-12-07 11:56:35,204 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=51 pTM=0.26 ipTM=0.761 tol=6.39
2024-12-07 11:57:07,485 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=51 pTM=0.261 ipTM=0.762 tol=3.53
2024-12-07 11:57:39,739 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=51.6 pTM=0.263 ipTM=0.785 tol=6.68
2024-12-07 11:58:12,025 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=52.1 pTM=0.261 ipTM=0.787 tol=3.99
2024-12-07 11:58:44,309 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=51.5 pTM=0.264 ipTM=0.779 tol=7.8
2024-12-07 11:59:16,593 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=52.2 pTM=0.262 ipTM=0.807 tol=6.64
2024-12-07 11:59:48,870 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=52.2 pTM=0.26 ipTM=0.816 tol=8.18
2024-12-07 12:00:21,144 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=51.6 pTM=0.262 ipTM=0.792 tol=5.78
2024-12-07 12:00:53,429 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=52 pTM=0.263 ipTM=0.816 tol=4.42
2024-12-07 12:01:25,720 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=52.7 pTM=0.262 ipTM=0.813 tol=4.29
2024-12-07 12:01:57,992 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=51.8 pTM=0.262 ipTM=0.79 tol=2.07
2024-12-07 12:02:30,289 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=52.6 pTM=0.261 ipTM=0.831 tol=4.48
2024-12-07 12:03:02,606 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=52.6 pTM=0.262 ipTM=0.805 tol=4.33
2024-12-07 12:03:34,923 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=52.1 pTM=0.262 ipTM=0.789 tol=4.82
2024-12-07 12:04:07,220 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=52 pTM=0.262 ipTM=0.792 tol=1.86
2024-12-07 12:04:39,486 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=51.8 pTM=0.262 ipTM=0.786 tol=4.92
2024-12-07 12:05:11,746 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=52.3 pTM=0.262 ipTM=0.837 tol=3.98
2024-12-07 12:05:44,012 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=51.9 pTM=0.263 ipTM=0.779 tol=11.7
2024-12-07 12:06:16,283 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=52.2 pTM=0.263 ipTM=0.806 tol=2.54
2024-12-07 12:06:48,558 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=51.5 pTM=0.263 ipTM=0.779 tol=8.54
2024-12-07 12:07:20,848 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=52.8 pTM=0.262 ipTM=0.845 tol=6.11
2024-12-07 12:07:53,183 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=52 pTM=0.262 ipTM=0.792 tol=5.57
2024-12-07 12:07:53,184 alphafold2_multimer_v3_model_3_seed_000 took 1000.7s (30 recycles)
2024-12-07 12:08:26,262 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=43.7 pTM=0.25 ipTM=0.242
2024-12-07 12:08:58,575 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=46.1 pTM=0.257 ipTM=0.448 tol=16.2
2024-12-07 12:09:30,869 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=46.8 pTM=0.26 ipTM=0.419 tol=11.7
2024-12-07 12:10:03,165 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=47.5 pTM=0.259 ipTM=0.218 tol=9.62
2024-12-07 12:10:35,511 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=47.9 pTM=0.261 ipTM=0.239 tol=6.25
2024-12-07 12:11:07,853 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=47.9 pTM=0.26 ipTM=0.235 tol=5.11
2024-12-07 12:11:40,204 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=48.2 pTM=0.26 ipTM=0.232 tol=4.67
2024-12-07 12:12:12,546 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=47.6 pTM=0.262 ipTM=0.447 tol=6.87
2024-12-07 12:12:44,930 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48 pTM=0.261 ipTM=0.239 tol=4.29
2024-12-07 12:13:17,318 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=47.9 pTM=0.261 ipTM=0.234 tol=3.18
2024-12-07 12:13:49,678 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=47.7 pTM=0.262 ipTM=0.243 tol=3.24
2024-12-07 12:14:22,009 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=47.4 pTM=0.262 ipTM=0.245 tol=3.17
2024-12-07 12:14:54,331 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=47.7 pTM=0.263 ipTM=0.49 tol=4.91
2024-12-07 12:15:26,667 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48.1 pTM=0.263 ipTM=0.237 tol=3.49
2024-12-07 12:15:59,008 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=48 pTM=0.261 ipTM=0.234 tol=3.35
2024-12-07 12:16:31,329 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=48 pTM=0.258 ipTM=0.259 tol=3.47
2024-12-07 12:17:03,632 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=48.2 pTM=0.26 ipTM=0.322 tol=4.69
2024-12-07 12:17:35,925 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48.2 pTM=0.258 ipTM=0.213 tol=3.46
2024-12-07 12:18:08,188 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=48.5 pTM=0.259 ipTM=0.217 tol=3.97
2024-12-07 12:18:40,411 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=48.3 pTM=0.26 ipTM=0.233 tol=3.42
2024-12-07 12:19:12,644 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=48.3 pTM=0.259 ipTM=0.223 tol=2.97
2024-12-07 12:19:44,885 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=48.1 pTM=0.26 ipTM=0.232 tol=4.39
2024-12-07 12:20:17,096 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48 pTM=0.259 ipTM=0.222 tol=3.12
2024-12-07 12:20:49,334 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=47.7 pTM=0.261 ipTM=0.233 tol=3.04
2024-12-07 12:21:21,578 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=47.7 pTM=0.262 ipTM=0.24 tol=2.94
2024-12-07 12:21:53,790 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=47.8 pTM=0.263 ipTM=0.239 tol=5.6
2024-12-07 12:22:26,056 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=47.8 pTM=0.262 ipTM=0.239 tol=2.4
2024-12-07 12:22:58,304 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=47.7 pTM=0.262 ipTM=0.233 tol=2.27
2024-12-07 12:23:30,557 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=47.6 pTM=0.262 ipTM=0.235 tol=4.8
2024-12-07 12:24:02,859 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=47.8 pTM=0.262 ipTM=0.233 tol=3.82
2024-12-07 12:24:35,216 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=47.9 pTM=0.26 ipTM=0.228 tol=3.99
2024-12-07 12:24:35,217 alphafold2_multimer_v3_model_4_seed_000 took 1001.2s (30 recycles)
2024-12-07 12:25:08,408 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=45.8 pTM=0.258 ipTM=0.461
2024-12-07 12:25:40,790 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=47.8 pTM=0.254 ipTM=0.198 tol=13.5
2024-12-07 12:26:13,173 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=48.2 pTM=0.254 ipTM=0.221 tol=14.4
2024-12-07 12:26:45,522 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=49.1 pTM=0.256 ipTM=0.252 tol=10.5
2024-12-07 12:27:17,861 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=50 pTM=0.257 ipTM=0.254 tol=6.89
2024-12-07 12:27:50,158 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=50.2 pTM=0.256 ipTM=0.229 tol=4.03
2024-12-07 12:28:22,424 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=50.8 pTM=0.256 ipTM=0.781 tol=10.1
2024-12-07 12:28:54,679 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=51.2 pTM=0.258 ipTM=0.786 tol=9.87
2024-12-07 12:29:26,900 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=50.7 pTM=0.261 ipTM=0.762 tol=3.62
2024-12-07 12:29:59,152 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=50.7 pTM=0.26 ipTM=0.716 tol=4.99
2024-12-07 12:30:31,363 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=51.5 pTM=0.26 ipTM=0.761 tol=4.71
2024-12-07 12:31:03,537 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=51 pTM=0.261 ipTM=0.736 tol=5.45
2024-12-07 12:31:35,710 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=50.9 pTM=0.262 ipTM=0.753 tol=3.98
2024-12-07 12:32:07,880 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=50.5 pTM=0.262 ipTM=0.715 tol=4.2
2024-12-07 12:32:40,075 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=50.9 pTM=0.261 ipTM=0.728 tol=5.49
2024-12-07 12:33:12,317 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=51.4 pTM=0.259 ipTM=0.779 tol=9.99
2024-12-07 12:33:44,569 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=51 pTM=0.259 ipTM=0.78 tol=5.29
2024-12-07 12:34:16,797 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=50.8 pTM=0.26 ipTM=0.761 tol=6.6
2024-12-07 12:34:49,035 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=51.6 pTM=0.258 ipTM=0.762 tol=8.62
2024-12-07 12:35:21,271 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=51.1 pTM=0.259 ipTM=0.755 tol=3.95
2024-12-07 12:35:53,519 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=50.9 pTM=0.259 ipTM=0.773 tol=4.93
2024-12-07 12:36:25,742 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=52.4 pTM=0.259 ipTM=0.819 tol=5.07
2024-12-07 12:36:57,989 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=51.6 pTM=0.26 ipTM=0.806 tol=4.54
2024-12-07 12:37:30,231 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=50.7 pTM=0.26 ipTM=0.761 tol=6.08
2024-12-07 12:38:02,468 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=52.4 pTM=0.261 ipTM=0.841 tol=5.55
2024-12-07 12:38:34,719 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=51.7 pTM=0.262 ipTM=0.782 tol=3.66
2024-12-07 12:39:06,974 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=52 pTM=0.262 ipTM=0.786 tol=3.31
2024-12-07 12:39:39,228 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=51.1 pTM=0.264 ipTM=0.758 tol=4.48
2024-12-07 12:40:11,517 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=50.7 pTM=0.264 ipTM=0.738 tol=5.19
2024-12-07 12:40:43,778 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=52.1 pTM=0.262 ipTM=0.811 tol=3.21
2024-12-07 12:41:16,016 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=51.8 pTM=0.261 ipTM=0.772 tol=2.97
2024-12-07 12:41:16,017 alphafold2_multimer_v3_model_5_seed_000 took 1000.0s (30 recycles)
2024-12-07 12:41:16,838 reranking models by 'multimer' metric
2024-12-07 12:41:19,893 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 12:42:55,186 Relaxation took 98.3s
2024-12-07 12:42:55,186 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=52 pTM=0.262 ipTM=0.792
2024-12-07 12:44:52,203 Relaxation took 117.0s
2024-12-07 12:44:52,203 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=51.8 pTM=0.261 ipTM=0.772
2024-12-07 12:46:36,870 Relaxation took 104.7s
2024-12-07 12:46:36,870 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=49.2 pTM=0.247 ipTM=0.55
2024-12-07 12:48:08,505 Relaxation took 91.6s
2024-12-07 12:48:08,505 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=47.9 pTM=0.26 ipTM=0.228
2024-12-07 12:49:39,375 Relaxation took 90.9s
2024-12-07 12:49:39,375 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=50.4 pTM=0.252 ipTM=0.225
2024-12-07 12:49:41,475 Done