2024-12-07 11:12:39,689 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 11:12:39,995 Running on GPU
2024-12-07 11:12:42,420 Found 6 citations for tools or databases
2024-12-07 11:12:42,421 Query 1/1: PDZRN3_OIP5 (length 1295)
2024-12-07 11:12:42,714 Sleeping for 8s. Reason: PENDING
2024-12-07 11:12:50,974 Sleeping for 8s. Reason: RUNNING
2024-12-07 11:12:59,231 Sleeping for 8s. Reason: RUNNING
2024-12-07 11:13:07,488 Sleeping for 5s. Reason: RUNNING
2024-12-07 11:13:12,748 Sleeping for 7s. Reason: RUNNING
2024-12-07 11:13:20,008 Sleeping for 6s. Reason: RUNNING
2024-12-07 11:13:26,268 Sleeping for 7s. Reason: RUNNING
2024-12-07 11:13:33,525 Sleeping for 6s. Reason: RUNNING
2024-12-07 11:13:39,789 Sleeping for 8s. Reason: RUNNING
2024-12-07 11:13:48,054 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:13:58,314 Sleeping for 8s. Reason: RUNNING
2024-12-07 11:14:06,577 Sleeping for 6s. Reason: RUNNING
2024-12-07 11:14:12,830 Sleeping for 8s. Reason: RUNNING
2024-12-07 11:14:21,086 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:14:31,354 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:14:40,610 Sleeping for 6s. Reason: RUNNING
2024-12-07 11:14:46,862 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:14:57,120 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:15:06,382 Sleeping for 5s. Reason: RUNNING
2024-12-07 11:15:11,632 Sleeping for 6s. Reason: RUNNING
2024-12-07 11:15:17,897 Sleeping for 5s. Reason: RUNNING
2024-12-07 11:15:23,156 Sleeping for 8s. Reason: RUNNING
2024-12-07 11:15:31,417 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:15:41,675 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:15:51,935 Sleeping for 8s. Reason: RUNNING
2024-12-07 11:16:00,195 Sleeping for 8s. Reason: RUNNING
2024-12-07 11:16:08,459 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:16:19,583 Sleeping for 5s. Reason: PENDING
2024-12-07 11:16:24,834 Sleeping for 9s. Reason: PENDING
2024-12-07 11:16:34,090 Sleeping for 6s. Reason: RUNNING
2024-12-07 11:16:40,349 Sleeping for 8s. Reason: RUNNING
2024-12-07 11:16:48,601 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:16:58,858 Sleeping for 6s. Reason: RUNNING
2024-12-07 11:17:05,110 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:17:14,373 Sleeping for 7s. Reason: RUNNING
2024-12-07 11:17:21,630 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:17:30,886 Sleeping for 8s. Reason: RUNNING
2024-12-07 11:17:39,152 Sleeping for 6s. Reason: RUNNING
2024-12-07 11:17:45,403 Sleeping for 7s. Reason: RUNNING
2024-12-07 11:17:52,816 Sleeping for 7s. Reason: RUNNING
2024-12-07 11:18:00,081 Sleeping for 10s. Reason: RUNNING
2024-12-07 11:18:10,347 Sleeping for 5s. Reason: RUNNING
2024-12-07 11:18:15,605 Sleeping for 7s. Reason: RUNNING
2024-12-07 11:18:22,860 Sleeping for 9s. Reason: RUNNING
2024-12-07 11:18:36,867 Setting max_seq=508, max_extra_seq=2048
2024-12-07 11:21:59,646 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=44.3 pTM=0.238 ipTM=0.194
2024-12-07 11:22:43,174 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=46.2 pTM=0.312 ipTM=0.552 tol=20.5
2024-12-07 11:23:26,867 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=44.5 pTM=0.267 ipTM=0.412 tol=18.4
2024-12-07 11:24:10,721 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=45.6 pTM=0.261 ipTM=0.371 tol=15.8
2024-12-07 11:24:54,593 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=46.1 pTM=0.253 ipTM=0.339 tol=9.98
2024-12-07 11:25:38,514 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=47 pTM=0.259 ipTM=0.354 tol=8.45
2024-12-07 11:26:22,484 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=46.9 pTM=0.258 ipTM=0.357 tol=4.88
2024-12-07 11:27:06,483 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=47.6 pTM=0.26 ipTM=0.386 tol=3.63
2024-12-07 11:27:50,471 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=47.5 pTM=0.261 ipTM=0.377 tol=3.44
2024-12-07 11:28:34,434 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=47.8 pTM=0.264 ipTM=0.4 tol=2.39
2024-12-07 11:29:18,383 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=47.6 pTM=0.261 ipTM=0.382 tol=2.1
2024-12-07 11:30:02,347 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=47.7 pTM=0.262 ipTM=0.396 tol=3.33
2024-12-07 11:30:46,334 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=47.4 pTM=0.261 ipTM=0.381 tol=2.55
2024-12-07 11:31:30,404 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=47.6 pTM=0.259 ipTM=0.39 tol=2.53
2024-12-07 11:32:14,450 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=47.5 pTM=0.26 ipTM=0.377 tol=2.56
2024-12-07 11:32:58,431 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=47.6 pTM=0.26 ipTM=0.388 tol=3.32
2024-12-07 11:33:42,388 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=47.7 pTM=0.261 ipTM=0.377 tol=2.98
2024-12-07 11:34:26,377 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=47.9 pTM=0.259 ipTM=0.387 tol=2.67
2024-12-07 11:35:10,379 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=47.7 pTM=0.259 ipTM=0.381 tol=3.87
2024-12-07 11:35:54,367 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=47.7 pTM=0.261 ipTM=0.392 tol=1.52
2024-12-07 11:36:38,294 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=47.4 pTM=0.261 ipTM=0.384 tol=1.34
2024-12-07 11:37:22,281 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=47.9 pTM=0.26 ipTM=0.394 tol=3.96
2024-12-07 11:38:06,234 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=47.9 pTM=0.258 ipTM=0.383 tol=3.78
2024-12-07 11:38:50,129 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=48 pTM=0.259 ipTM=0.388 tol=1.37
2024-12-07 11:39:34,038 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=47.8 pTM=0.26 ipTM=0.377 tol=1.36
2024-12-07 11:40:17,960 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=48.1 pTM=0.259 ipTM=0.392 tol=3.88
2024-12-07 11:41:01,890 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=47.8 pTM=0.259 ipTM=0.375 tol=3.94
2024-12-07 11:41:45,845 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=48 pTM=0.258 ipTM=0.389 tol=1.16
2024-12-07 11:42:29,757 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=47.9 pTM=0.259 ipTM=0.382 tol=1.31
2024-12-07 11:43:13,712 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=48.4 pTM=0.262 ipTM=0.408 tol=1.55
2024-12-07 11:43:57,703 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=47.8 pTM=0.259 ipTM=0.377 tol=1.35
2024-12-07 11:43:57,704 alphafold2_multimer_v3_model_1_seed_000 took 1515.8s (30 recycles)
2024-12-07 11:44:42,822 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=44.2 pTM=0.262 ipTM=0.275
2024-12-07 11:45:26,969 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=44.3 pTM=0.249 ipTM=0.178 tol=25.6
2024-12-07 11:46:11,040 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=46.7 pTM=0.318 ipTM=0.536 tol=22.3
2024-12-07 11:46:55,107 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=46.1 pTM=0.276 ipTM=0.307 tol=11.6
2024-12-07 11:47:39,191 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=46.3 pTM=0.257 ipTM=0.212 tol=10.9
2024-12-07 11:48:23,263 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=47 pTM=0.252 ipTM=0.316 tol=8.95
2024-12-07 11:49:07,306 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=46.2 pTM=0.248 ipTM=0.305 tol=9.05
2024-12-07 11:49:51,326 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=45.7 pTM=0.261 ipTM=0.293 tol=16
2024-12-07 11:50:35,465 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=46.1 pTM=0.252 ipTM=0.211 tol=13
2024-12-07 11:51:19,550 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=47 pTM=0.248 ipTM=0.329 tol=9.58
2024-12-07 11:52:03,627 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=46.9 pTM=0.244 ipTM=0.319 tol=7.3
2024-12-07 11:52:47,704 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=46.9 pTM=0.245 ipTM=0.307 tol=7.26
2024-12-07 11:53:31,755 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=46.8 pTM=0.244 ipTM=0.297 tol=8.38
2024-12-07 11:54:15,837 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=46.9 pTM=0.245 ipTM=0.287 tol=6.73
2024-12-07 11:54:59,945 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=47.2 pTM=0.245 ipTM=0.3 tol=5.58
2024-12-07 11:55:44,060 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=46.9 pTM=0.244 ipTM=0.292 tol=4.21
2024-12-07 11:56:28,128 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=47 pTM=0.244 ipTM=0.305 tol=4.58
2024-12-07 11:57:12,264 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=46.9 pTM=0.245 ipTM=0.293 tol=6.81
2024-12-07 11:57:56,323 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=46.7 pTM=0.248 ipTM=0.293 tol=6.8
2024-12-07 11:58:40,427 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=46.7 pTM=0.246 ipTM=0.287 tol=5.03
2024-12-07 11:59:24,540 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=46.9 pTM=0.244 ipTM=0.307 tol=5.89
2024-12-07 12:00:08,594 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=46.8 pTM=0.242 ipTM=0.299 tol=5.1
2024-12-07 12:00:52,680 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=46.9 pTM=0.243 ipTM=0.313 tol=5.91
2024-12-07 12:01:36,821 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=46.8 pTM=0.246 ipTM=0.286 tol=6.96
2024-12-07 12:02:20,959 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=47 pTM=0.244 ipTM=0.301 tol=6.48
2024-12-07 12:03:05,092 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=46.6 pTM=0.242 ipTM=0.29 tol=6.39
2024-12-07 12:03:49,269 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=46.9 pTM=0.243 ipTM=0.275 tol=6.07
2024-12-07 12:04:33,410 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=47.2 pTM=0.242 ipTM=0.287 tol=7.41
2024-12-07 12:05:17,543 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=46.8 pTM=0.244 ipTM=0.224 tol=6.06
2024-12-07 12:06:01,641 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=47.2 pTM=0.243 ipTM=0.256 tol=5.66
2024-12-07 12:06:45,741 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=47.4 pTM=0.251 ipTM=0.339 tol=16
2024-12-07 12:06:45,742 alphafold2_multimer_v3_model_2_seed_000 took 1367.0s (30 recycles)
2024-12-07 12:07:30,940 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=45.5 pTM=0.288 ipTM=0.5
2024-12-07 12:08:15,152 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=47.6 pTM=0.286 ipTM=0.442 tol=14.7
2024-12-07 12:08:59,351 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=47.8 pTM=0.287 ipTM=0.457 tol=9.96
2024-12-07 12:09:43,534 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=47.6 pTM=0.287 ipTM=0.45 tol=7.64
2024-12-07 12:10:27,713 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=47.4 pTM=0.285 ipTM=0.447 tol=7.96
2024-12-07 12:11:11,865 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=48 pTM=0.291 ipTM=0.474 tol=8.88
2024-12-07 12:11:56,031 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=47.8 pTM=0.289 ipTM=0.453 tol=3.64
2024-12-07 12:12:40,204 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=48.3 pTM=0.293 ipTM=0.465 tol=3.79
2024-12-07 12:13:24,315 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=48.1 pTM=0.297 ipTM=0.46 tol=3.85
2024-12-07 12:14:08,465 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=48.4 pTM=0.297 ipTM=0.46 tol=3.12
2024-12-07 12:14:52,614 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=48.6 pTM=0.299 ipTM=0.472 tol=2.54
2024-12-07 12:15:36,803 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=48.7 pTM=0.299 ipTM=0.468 tol=2.68
2024-12-07 12:16:20,959 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=48.2 pTM=0.294 ipTM=0.463 tol=2.59
2024-12-07 12:17:05,103 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=48.3 pTM=0.296 ipTM=0.467 tol=2.17
2024-12-07 12:17:49,168 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=48.1 pTM=0.293 ipTM=0.456 tol=2.96
2024-12-07 12:18:33,221 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=48.2 pTM=0.299 ipTM=0.456 tol=2.97
2024-12-07 12:19:17,340 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=48.3 pTM=0.296 ipTM=0.442 tol=3.2
2024-12-07 12:20:01,580 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=48.7 pTM=0.3 ipTM=0.462 tol=2.62
2024-12-07 12:20:45,857 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=48.4 pTM=0.3 ipTM=0.464 tol=2.08
2024-12-07 12:21:30,101 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=48.8 pTM=0.303 ipTM=0.482 tol=2.19
2024-12-07 12:22:14,316 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=48.5 pTM=0.298 ipTM=0.476 tol=2.44
2024-12-07 12:22:58,558 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=48.8 pTM=0.296 ipTM=0.48 tol=2.25
2024-12-07 12:23:42,769 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=48.4 pTM=0.294 ipTM=0.471 tol=1.99
2024-12-07 12:24:27,013 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=48.6 pTM=0.297 ipTM=0.472 tol=2.12
2024-12-07 12:25:11,265 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=48.4 pTM=0.293 ipTM=0.467 tol=1.56
2024-12-07 12:25:55,448 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=48.9 pTM=0.293 ipTM=0.479 tol=2.02
2024-12-07 12:26:39,673 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=48.4 pTM=0.291 ipTM=0.456 tol=2.18
2024-12-07 12:27:23,891 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=48.4 pTM=0.288 ipTM=0.461 tol=1.88
2024-12-07 12:28:08,149 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=48.5 pTM=0.291 ipTM=0.455 tol=1.82
2024-12-07 12:28:52,411 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=48.6 pTM=0.291 ipTM=0.462 tol=2.43
2024-12-07 12:29:36,617 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=48.8 pTM=0.297 ipTM=0.476 tol=1.8
2024-12-07 12:29:36,618 alphafold2_multimer_v3_model_3_seed_000 took 1369.9s (30 recycles)
2024-12-07 12:30:21,889 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=43.7 pTM=0.294 ipTM=0.48
2024-12-07 12:31:06,218 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=44.8 pTM=0.267 ipTM=0.309 tol=24.3
2024-12-07 12:31:50,543 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=45.6 pTM=0.285 ipTM=0.447 tol=25.8
2024-12-07 12:32:34,852 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=46.7 pTM=0.277 ipTM=0.464 tol=18.2
2024-12-07 12:33:19,081 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=46.7 pTM=0.28 ipTM=0.464 tol=18.2
2024-12-07 12:34:03,305 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=48.7 pTM=0.319 ipTM=0.56 tol=12.9
2024-12-07 12:34:47,589 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=49.3 pTM=0.33 ipTM=0.552 tol=7.86
2024-12-07 12:35:31,833 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=49 pTM=0.318 ipTM=0.485 tol=7.2
2024-12-07 12:36:16,015 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=49.7 pTM=0.329 ipTM=0.529 tol=8.86
2024-12-07 12:37:00,149 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=49.4 pTM=0.322 ipTM=0.506 tol=6.69
2024-12-07 12:37:44,295 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=49.9 pTM=0.326 ipTM=0.513 tol=7.53
2024-12-07 12:38:28,464 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=49 pTM=0.315 ipTM=0.477 tol=3.98
2024-12-07 12:39:12,618 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=49 pTM=0.313 ipTM=0.473 tol=6.27
2024-12-07 12:39:56,784 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48.8 pTM=0.307 ipTM=0.461 tol=8.31
2024-12-07 12:40:40,985 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=49 pTM=0.309 ipTM=0.47 tol=6.68
2024-12-07 12:41:25,188 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=48.8 pTM=0.308 ipTM=0.46 tol=7.57
2024-12-07 12:42:09,316 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=49.9 pTM=0.33 ipTM=0.534 tol=8.52
2024-12-07 12:42:53,434 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=50.2 pTM=0.342 ipTM=0.582 tol=4.14
2024-12-07 12:43:37,555 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=50.7 pTM=0.345 ipTM=0.583 tol=9.34
2024-12-07 12:44:21,654 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=49.9 pTM=0.333 ipTM=0.554 tol=7.52
2024-12-07 12:45:05,773 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=50.2 pTM=0.337 ipTM=0.575 tol=5.65
2024-12-07 12:45:49,876 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=50.1 pTM=0.337 ipTM=0.567 tol=6.56
2024-12-07 12:46:34,015 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=51 pTM=0.347 ipTM=0.592 tol=2.83
2024-12-07 12:47:18,160 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=50.6 pTM=0.345 ipTM=0.59 tol=5.61
2024-12-07 12:48:02,258 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=50.9 pTM=0.349 ipTM=0.608 tol=5.88
2024-12-07 12:48:46,316 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=50.5 pTM=0.342 ipTM=0.588 tol=10.1
2024-12-07 12:49:30,384 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=50.8 pTM=0.345 ipTM=0.598 tol=8.71
2024-12-07 12:50:14,423 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=50.1 pTM=0.335 ipTM=0.575 tol=9.17
2024-12-07 12:50:58,482 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=51 pTM=0.347 ipTM=0.602 tol=7.17
2024-12-07 12:51:42,522 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=50.4 pTM=0.345 ipTM=0.595 tol=6.62
2024-12-07 12:52:26,569 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=51 pTM=0.352 ipTM=0.612 tol=6.7
2024-12-07 12:52:26,570 alphafold2_multimer_v3_model_4_seed_000 took 1368.9s (30 recycles)
2024-12-07 12:53:11,815 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=43.8 pTM=0.273 ipTM=0.421
2024-12-07 12:53:56,058 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=45 pTM=0.28 ipTM=0.338 tol=26.8
2024-12-07 12:54:40,368 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=44.2 pTM=0.252 ipTM=0.352 tol=16.2
2024-12-07 12:55:24,577 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=46.3 pTM=0.277 ipTM=0.444 tol=17.4
2024-12-07 12:56:08,755 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=46.6 pTM=0.268 ipTM=0.387 tol=8.83
2024-12-07 12:56:52,908 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47.1 pTM=0.286 ipTM=0.449 tol=15.3
2024-12-07 12:57:36,997 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=46.5 pTM=0.284 ipTM=0.442 tol=7.52
2024-12-07 12:58:21,112 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=46.9 pTM=0.272 ipTM=0.428 tol=5.28
2024-12-07 12:59:05,243 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=47.1 pTM=0.267 ipTM=0.404 tol=5.48
2024-12-07 12:59:49,402 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47.4 pTM=0.276 ipTM=0.432 tol=6.03
2024-12-07 13:00:33,591 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=47.5 pTM=0.274 ipTM=0.419 tol=21.7
2024-12-07 13:01:17,827 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47.2 pTM=0.267 ipTM=0.42 tol=9.16
2024-12-07 13:02:02,035 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=47.9 pTM=0.273 ipTM=0.427 tol=8.28
2024-12-07 13:02:46,257 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=46.8 pTM=0.264 ipTM=0.376 tol=5.59
2024-12-07 13:03:30,417 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=47.3 pTM=0.271 ipTM=0.422 tol=4.41
2024-12-07 13:04:14,619 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=48.4 pTM=0.277 ipTM=0.406 tol=17.2
2024-12-07 13:04:58,808 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=47.6 pTM=0.268 ipTM=0.385 tol=7.55
2024-12-07 13:05:42,987 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=48 pTM=0.268 ipTM=0.379 tol=6.44
2024-12-07 13:06:27,190 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=47.7 pTM=0.267 ipTM=0.37 tol=4.86
2024-12-07 13:07:11,421 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=48 pTM=0.272 ipTM=0.406 tol=8.03
2024-12-07 13:07:55,627 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=47.8 pTM=0.271 ipTM=0.373 tol=3.88
2024-12-07 13:08:39,848 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=48 pTM=0.275 ipTM=0.408 tol=5.83
2024-12-07 13:09:24,056 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=47.9 pTM=0.274 ipTM=0.414 tol=4.19
2024-12-07 13:10:08,269 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=48.2 pTM=0.274 ipTM=0.411 tol=6.06
2024-12-07 13:10:52,470 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=47.8 pTM=0.275 ipTM=0.402 tol=7.57
2024-12-07 13:11:36,663 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=48.1 pTM=0.276 ipTM=0.416 tol=4.75
2024-12-07 13:12:20,826 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=47.8 pTM=0.276 ipTM=0.406 tol=3.66
2024-12-07 13:13:05,051 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=47.8 pTM=0.277 ipTM=0.41 tol=2.93
2024-12-07 13:13:49,239 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=47.7 pTM=0.28 ipTM=0.416 tol=3.94
2024-12-07 13:14:33,421 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=47.7 pTM=0.276 ipTM=0.403 tol=3
2024-12-07 13:15:17,619 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47.8 pTM=0.277 ipTM=0.421 tol=2.29
2024-12-07 13:15:17,620 alphafold2_multimer_v3_model_5_seed_000 took 1370.0s (30 recycles)
2024-12-07 13:15:18,634 reranking models by 'multimer' metric
2024-12-07 13:15:19,866 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 13:17:26,663 Relaxation took 128.0s
2024-12-07 13:17:26,663 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=51 pTM=0.352 ipTM=0.612
2024-12-07 13:19:53,686 Relaxation took 147.0s
2024-12-07 13:19:53,686 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=48.8 pTM=0.297 ipTM=0.476
2024-12-07 13:21:58,158 Relaxation took 124.5s
2024-12-07 13:21:58,158 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47.8 pTM=0.277 ipTM=0.421
2024-12-07 13:24:04,651 Relaxation took 126.5s
2024-12-07 13:24:04,651 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=47.8 pTM=0.259 ipTM=0.377
2024-12-07 13:27:13,823 Relaxation took 189.2s
2024-12-07 13:27:13,823 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=47.4 pTM=0.251 ipTM=0.339
2024-12-07 13:27:16,472 Done