2024-12-07 12:00:33,659 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 12:00:34,024 Running on GPU
2024-12-07 12:00:36,883 Found 6 citations for tools or databases
2024-12-07 12:00:36,883 Query 1/1: PIAS4_PLEKHG4 (length 1701)
2024-12-07 12:00:37,167 Sleeping for 8s. Reason: PENDING
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2024-12-07 12:00:51,680 Sleeping for 8s. Reason: RUNNING
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2024-12-07 12:01:24,970 Sleeping for 8s. Reason: RUNNING
2024-12-07 12:01:33,233 Sleeping for 6s. Reason: RUNNING
2024-12-07 12:01:39,488 Sleeping for 7s. Reason: RUNNING
2024-12-07 12:01:46,750 Sleeping for 8s. Reason: RUNNING
2024-12-07 12:01:55,012 Sleeping for 6s. Reason: RUNNING
2024-12-07 12:02:01,268 Sleeping for 5s. Reason: RUNNING
2024-12-07 12:02:06,520 Sleeping for 10s. Reason: RUNNING
2024-12-07 12:02:16,787 Sleeping for 5s. Reason: RUNNING
2024-12-07 12:02:22,042 Sleeping for 6s. Reason: RUNNING
2024-12-07 12:02:28,448 Sleeping for 8s. Reason: RUNNING
2024-12-07 12:02:36,706 Sleeping for 9s. Reason: RUNNING
2024-12-07 12:02:45,966 Sleeping for 10s. Reason: RUNNING
2024-12-07 12:02:56,227 Sleeping for 5s. Reason: RUNNING
2024-12-07 12:03:01,483 Sleeping for 8s. Reason: RUNNING
2024-12-07 12:03:09,750 Sleeping for 9s. Reason: RUNNING
2024-12-07 12:03:19,023 Sleeping for 6s. Reason: RUNNING
2024-12-07 12:03:25,285 Sleeping for 6s. Reason: RUNNING
2024-12-07 12:03:32,649 Sleeping for 7s. Reason: PENDING
2024-12-07 12:03:39,906 Sleeping for 5s. Reason: RUNNING
2024-12-07 12:03:45,167 Sleeping for 8s. Reason: RUNNING
2024-12-07 12:03:53,428 Sleeping for 10s. Reason: RUNNING
2024-12-07 12:04:03,701 Sleeping for 7s. Reason: RUNNING
2024-12-07 12:04:10,954 Sleeping for 9s. Reason: RUNNING
2024-12-07 12:04:20,215 Sleeping for 8s. Reason: RUNNING
2024-12-07 12:04:28,473 Sleeping for 8s. Reason: RUNNING
2024-12-07 12:04:36,733 Sleeping for 5s. Reason: RUNNING
2024-12-07 12:04:41,987 Sleeping for 6s. Reason: RUNNING
2024-12-07 12:04:48,243 Sleeping for 9s. Reason: RUNNING
2024-12-07 12:04:57,503 Sleeping for 8s. Reason: RUNNING
2024-12-07 12:05:05,768 Sleeping for 5s. Reason: RUNNING
2024-12-07 12:05:11,022 Sleeping for 10s. Reason: RUNNING
2024-12-07 12:05:21,281 Sleeping for 7s. Reason: RUNNING
2024-12-07 12:05:32,353 Setting max_seq=508, max_extra_seq=2048
2024-12-07 12:10:42,843 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=58.9 pTM=0.345 ipTM=0.21
2024-12-07 12:12:10,742 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=59.2 pTM=0.348 ipTM=0.206 tol=9.74
2024-12-07 12:13:38,847 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59.1 pTM=0.349 ipTM=0.211 tol=8.8
2024-12-07 12:15:07,028 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=59 pTM=0.347 ipTM=0.221 tol=6.49
2024-12-07 12:16:35,328 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=59.5 pTM=0.349 ipTM=0.249 tol=8.24
2024-12-07 12:18:03,601 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=59.4 pTM=0.35 ipTM=0.257 tol=4.51
2024-12-07 12:19:31,916 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59.6 pTM=0.351 ipTM=0.259 tol=4.26
2024-12-07 12:21:00,224 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.5 pTM=0.352 ipTM=0.263 tol=2.93
2024-12-07 12:22:28,555 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.3 pTM=0.348 ipTM=0.257 tol=3.01
2024-12-07 12:23:56,816 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=59.1 pTM=0.347 ipTM=0.249 tol=2.58
2024-12-07 12:25:25,005 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=59.3 pTM=0.35 ipTM=0.252 tol=2.99
2024-12-07 12:26:53,205 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.3 pTM=0.35 ipTM=0.258 tol=3.47
2024-12-07 12:28:21,424 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=59.6 pTM=0.351 ipTM=0.258 tol=3.41
2024-12-07 12:29:49,667 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=59.4 pTM=0.349 ipTM=0.251 tol=3.38
2024-12-07 12:31:17,915 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=59.4 pTM=0.348 ipTM=0.255 tol=2.79
2024-12-07 12:32:46,154 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=59.5 pTM=0.349 ipTM=0.249 tol=4.36
2024-12-07 12:34:14,305 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=59.2 pTM=0.345 ipTM=0.246 tol=3.9
2024-12-07 12:35:42,455 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=59.5 pTM=0.347 ipTM=0.244 tol=2.62
2024-12-07 12:37:10,595 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.5 pTM=0.346 ipTM=0.251 tol=3.17
2024-12-07 12:38:38,731 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=59.2 pTM=0.347 ipTM=0.259 tol=2.43
2024-12-07 12:40:06,950 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=59.4 pTM=0.347 ipTM=0.255 tol=2.27
2024-12-07 12:41:35,229 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=59.5 pTM=0.348 ipTM=0.261 tol=1.65
2024-12-07 12:43:03,527 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=59.5 pTM=0.35 ipTM=0.257 tol=1.71
2024-12-07 12:44:31,834 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=59.7 pTM=0.35 ipTM=0.258 tol=1.56
2024-12-07 12:46:00,183 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=59.4 pTM=0.35 ipTM=0.26 tol=6.72
2024-12-07 12:47:28,474 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=59.4 pTM=0.349 ipTM=0.254 tol=7.52
2024-12-07 12:48:56,656 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=59.3 pTM=0.347 ipTM=0.252 tol=4.22
2024-12-07 12:50:24,857 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=59.2 pTM=0.345 ipTM=0.256 tol=2.21
2024-12-07 12:51:53,145 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=59.3 pTM=0.347 ipTM=0.248 tol=4.32
2024-12-07 12:53:21,518 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=59.4 pTM=0.347 ipTM=0.238 tol=4.56
2024-12-07 12:54:49,879 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59.5 pTM=0.348 ipTM=0.242 tol=2.36
2024-12-07 12:54:49,881 alphafold2_multimer_v3_model_1_seed_000 took 2950.8s (30 recycles)
2024-12-07 12:56:20,524 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.5 pTM=0.364 ipTM=0.207
2024-12-07 12:57:49,018 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=59.5 pTM=0.381 ipTM=0.272 tol=19.8
2024-12-07 12:59:17,644 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=59.7 pTM=0.365 ipTM=0.232 tol=12
2024-12-07 13:00:46,235 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=60.1 pTM=0.367 ipTM=0.243 tol=8.29
2024-12-07 13:02:14,729 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60.2 pTM=0.37 ipTM=0.249 tol=7.05
2024-12-07 13:03:43,238 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=60.2 pTM=0.369 ipTM=0.245 tol=6.45
2024-12-07 13:05:11,760 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=60.4 pTM=0.369 ipTM=0.241 tol=4.58
2024-12-07 13:06:40,281 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=60.3 pTM=0.369 ipTM=0.246 tol=3.95
2024-12-07 13:08:08,878 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=60.1 pTM=0.365 ipTM=0.24 tol=6.08
2024-12-07 13:09:37,453 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=60.1 pTM=0.366 ipTM=0.244 tol=4.55
2024-12-07 13:11:05,923 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=60.3 pTM=0.369 ipTM=0.244 tol=4.34
2024-12-07 13:12:34,338 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=60.2 pTM=0.366 ipTM=0.239 tol=5.17
2024-12-07 13:14:02,830 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=60.3 pTM=0.368 ipTM=0.244 tol=4.68
2024-12-07 13:15:31,331 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=60.2 pTM=0.365 ipTM=0.238 tol=6.94
2024-12-07 13:16:59,892 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=60.1 pTM=0.367 ipTM=0.239 tol=5.68
2024-12-07 13:18:28,417 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=60.3 pTM=0.363 ipTM=0.224 tol=5
2024-12-07 13:19:56,982 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=60 pTM=0.364 ipTM=0.231 tol=6.64
2024-12-07 13:21:25,515 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=60.5 pTM=0.37 ipTM=0.243 tol=7.19
2024-12-07 13:22:54,128 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=60.4 pTM=0.367 ipTM=0.234 tol=7.27
2024-12-07 13:24:22,740 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=60.2 pTM=0.361 ipTM=0.223 tol=5.29
2024-12-07 13:25:51,215 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=60.3 pTM=0.364 ipTM=0.231 tol=6.26
2024-12-07 13:27:19,711 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=60.3 pTM=0.366 ipTM=0.235 tol=6.25
2024-12-07 13:28:48,214 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=60.4 pTM=0.366 ipTM=0.238 tol=4.46
2024-12-07 13:30:16,750 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=60.4 pTM=0.366 ipTM=0.236 tol=6.2
2024-12-07 13:31:45,243 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=60.4 pTM=0.369 ipTM=0.243 tol=5.96
2024-12-07 13:33:13,785 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=60.3 pTM=0.367 ipTM=0.238 tol=7.15
2024-12-07 13:34:42,346 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60.3 pTM=0.365 ipTM=0.234 tol=5.12
2024-12-07 13:36:10,867 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=60.3 pTM=0.369 ipTM=0.249 tol=4.51
2024-12-07 13:37:39,400 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=60.3 pTM=0.367 ipTM=0.235 tol=4.68
2024-12-07 13:39:07,893 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=60.3 pTM=0.368 ipTM=0.237 tol=4.66
2024-12-07 13:40:36,334 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=60.3 pTM=0.368 ipTM=0.239 tol=7.35
2024-12-07 13:40:36,336 alphafold2_multimer_v3_model_2_seed_000 took 2744.3s (30 recycles)
2024-12-07 13:42:07,068 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=59.4 pTM=0.357 ipTM=0.188
2024-12-07 13:43:35,683 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=59.9 pTM=0.362 ipTM=0.188 tol=14.8
2024-12-07 13:45:04,262 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=59.4 pTM=0.363 ipTM=0.201 tol=12.2
2024-12-07 13:46:32,857 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=59.5 pTM=0.357 ipTM=0.198 tol=7.97
2024-12-07 13:48:01,516 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.4 pTM=0.374 ipTM=0.249 tol=16.2
2024-12-07 13:49:30,271 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=59.3 pTM=0.364 ipTM=0.212 tol=11.7
2024-12-07 13:50:58,948 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.9 pTM=0.36 ipTM=0.208 tol=7.07
2024-12-07 13:52:27,478 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=60.2 pTM=0.385 ipTM=0.284 tol=5.15
2024-12-07 13:53:56,006 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=60.6 pTM=0.388 ipTM=0.294 tol=4.36
2024-12-07 13:55:24,552 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=60.4 pTM=0.385 ipTM=0.284 tol=3.23
2024-12-07 13:56:53,157 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=60.3 pTM=0.376 ipTM=0.254 tol=3.16
2024-12-07 13:58:21,732 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60.2 pTM=0.375 ipTM=0.241 tol=3.14
2024-12-07 13:59:50,318 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=60.2 pTM=0.373 ipTM=0.236 tol=3.66
2024-12-07 14:01:18,933 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.1 pTM=0.37 ipTM=0.225 tol=4
2024-12-07 14:02:47,550 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=60.1 pTM=0.375 ipTM=0.247 tol=4.48
2024-12-07 14:04:16,206 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60.1 pTM=0.375 ipTM=0.239 tol=2.51
2024-12-07 14:05:44,831 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60.3 pTM=0.37 ipTM=0.224 tol=3.12
2024-12-07 14:07:13,405 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=60.5 pTM=0.402 ipTM=0.334 tol=4.54
2024-12-07 14:08:42,007 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=60.3 pTM=0.381 ipTM=0.267 tol=3.73
2024-12-07 14:10:10,638 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=60.1 pTM=0.379 ipTM=0.262 tol=3.46
2024-12-07 14:11:39,258 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=60.1 pTM=0.37 ipTM=0.233 tol=4.73
2024-12-07 14:13:07,830 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60.1 pTM=0.375 ipTM=0.247 tol=3.42
2024-12-07 14:14:36,560 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60 pTM=0.373 ipTM=0.238 tol=3.45
2024-12-07 14:16:05,230 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60 pTM=0.371 ipTM=0.232 tol=3.76
2024-12-07 14:17:33,960 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=59.9 pTM=0.368 ipTM=0.226 tol=7.16
2024-12-07 14:19:02,680 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=59.9 pTM=0.382 ipTM=0.272 tol=5.66
2024-12-07 14:20:31,345 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=59.8 pTM=0.37 ipTM=0.229 tol=3.67
2024-12-07 14:22:00,055 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=59.8 pTM=0.37 ipTM=0.231 tol=3.47
2024-12-07 14:23:28,645 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.1 pTM=0.381 ipTM=0.269 tol=3.07
2024-12-07 14:24:57,438 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60 pTM=0.375 ipTM=0.245 tol=2.64
2024-12-07 14:26:26,117 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.2 pTM=0.371 ipTM=0.231 tol=4.84
2024-12-07 14:26:26,119 alphafold2_multimer_v3_model_3_seed_000 took 2747.6s (30 recycles)
2024-12-07 14:27:56,645 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=57.7 pTM=0.383 ipTM=0.25
2024-12-07 14:29:25,152 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=58.3 pTM=0.374 ipTM=0.253 tol=12.6
2024-12-07 14:30:53,684 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=58.1 pTM=0.365 ipTM=0.216 tol=11.6
2024-12-07 14:32:22,286 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=58.2 pTM=0.365 ipTM=0.216 tol=5.96
2024-12-07 14:33:50,865 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=58.6 pTM=0.368 ipTM=0.224 tol=5.82
2024-12-07 14:35:19,433 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=58.9 pTM=0.381 ipTM=0.263 tol=4.09
2024-12-07 14:36:47,920 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.2 pTM=0.39 ipTM=0.287 tol=4.79
2024-12-07 14:38:16,400 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=58.9 pTM=0.383 ipTM=0.269 tol=3.09
2024-12-07 14:39:44,856 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=58.8 pTM=0.374 ipTM=0.24 tol=3.94
2024-12-07 14:41:13,428 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=58.6 pTM=0.368 ipTM=0.225 tol=4.74
2024-12-07 14:42:41,904 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59.1 pTM=0.383 ipTM=0.269 tol=5.1
2024-12-07 14:44:10,345 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=59.4 pTM=0.397 ipTM=0.308 tol=4.92
2024-12-07 14:45:38,783 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59.2 pTM=0.388 ipTM=0.287 tol=4.18
2024-12-07 14:47:07,290 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.1 pTM=0.39 ipTM=0.292 tol=2.42
2024-12-07 14:48:35,799 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=58.9 pTM=0.384 ipTM=0.271 tol=2.33
2024-12-07 14:50:04,367 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=58.7 pTM=0.381 ipTM=0.264 tol=2.94
2024-12-07 14:51:32,931 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=58.8 pTM=0.375 ipTM=0.241 tol=2.47
2024-12-07 14:53:01,547 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=59.2 pTM=0.384 ipTM=0.27 tol=4.73
2024-12-07 14:54:30,056 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=59.4 pTM=0.387 ipTM=0.279 tol=5.84
2024-12-07 14:55:58,558 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.2 pTM=0.396 ipTM=0.308 tol=4.82
2024-12-07 14:57:27,051 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59.1 pTM=0.388 ipTM=0.285 tol=4.59
2024-12-07 14:58:55,584 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=59.2 pTM=0.39 ipTM=0.289 tol=3.2
2024-12-07 15:00:24,100 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.1 pTM=0.383 ipTM=0.266 tol=5.25
2024-12-07 15:01:52,598 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=59 pTM=0.385 ipTM=0.269 tol=5.5
2024-12-07 15:03:21,081 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=58.8 pTM=0.378 ipTM=0.251 tol=6.82
2024-12-07 15:04:49,562 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=59 pTM=0.388 ipTM=0.291 tol=5.65
2024-12-07 15:06:18,107 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=58.8 pTM=0.377 ipTM=0.247 tol=4.38
2024-12-07 15:07:46,714 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=58.5 pTM=0.372 ipTM=0.23 tol=4.52
2024-12-07 15:09:15,206 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=59 pTM=0.386 ipTM=0.281 tol=4.5
2024-12-07 15:10:43,678 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=59.1 pTM=0.389 ipTM=0.285 tol=4.65
2024-12-07 15:12:12,205 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=59.1 pTM=0.389 ipTM=0.289 tol=3.73
2024-12-07 15:12:12,206 alphafold2_multimer_v3_model_4_seed_000 took 2743.9s (30 recycles)
2024-12-07 15:13:42,862 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.5 pTM=0.38 ipTM=0.239
2024-12-07 15:15:11,345 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.2 pTM=0.374 ipTM=0.232 tol=10.6
2024-12-07 15:16:39,885 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=59.2 pTM=0.366 ipTM=0.219 tol=7.29
2024-12-07 15:18:08,376 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=59.4 pTM=0.365 ipTM=0.22 tol=5.7
2024-12-07 15:19:36,938 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=59.5 pTM=0.368 ipTM=0.22 tol=5.67
2024-12-07 15:21:05,514 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=59.7 pTM=0.37 ipTM=0.224 tol=4.2
2024-12-07 15:22:34,070 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=59.7 pTM=0.369 ipTM=0.219 tol=3.79
2024-12-07 15:24:02,727 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=59.7 pTM=0.372 ipTM=0.228 tol=4.41
2024-12-07 15:25:31,348 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=59.8 pTM=0.372 ipTM=0.222 tol=5.92
2024-12-07 15:26:59,979 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=59.7 pTM=0.369 ipTM=0.216 tol=5.25
2024-12-07 15:28:28,519 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=59.8 pTM=0.372 ipTM=0.222 tol=4.32
2024-12-07 15:29:57,154 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=60 pTM=0.374 ipTM=0.224 tol=3.92
2024-12-07 15:31:25,777 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=59.9 pTM=0.374 ipTM=0.22 tol=4.38
2024-12-07 15:32:54,351 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=59.9 pTM=0.376 ipTM=0.225 tol=3.56
2024-12-07 15:34:22,867 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=59.8 pTM=0.374 ipTM=0.221 tol=4.18
2024-12-07 15:35:51,447 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=59.8 pTM=0.379 ipTM=0.238 tol=4.59
2024-12-07 15:37:19,983 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=60 pTM=0.378 ipTM=0.238 tol=4.64
2024-12-07 15:38:48,500 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=59.9 pTM=0.373 ipTM=0.22 tol=3.82
2024-12-07 15:40:17,039 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=60 pTM=0.379 ipTM=0.234 tol=4.54
2024-12-07 15:41:45,548 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=59.9 pTM=0.377 ipTM=0.241 tol=3.84
2024-12-07 15:43:14,074 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=60 pTM=0.374 ipTM=0.223 tol=4.53
2024-12-07 15:44:42,623 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=60.1 pTM=0.376 ipTM=0.226 tol=5.08
2024-12-07 15:46:11,138 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=60 pTM=0.373 ipTM=0.22 tol=3.79
2024-12-07 15:47:39,746 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=60.2 pTM=0.375 ipTM=0.222 tol=3.28
2024-12-07 15:49:08,317 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=60 pTM=0.373 ipTM=0.216 tol=4.1
2024-12-07 15:50:36,842 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=59.8 pTM=0.371 ipTM=0.218 tol=3.31
2024-12-07 15:52:05,341 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=59.9 pTM=0.37 ipTM=0.216 tol=2.49
2024-12-07 15:53:33,790 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=59.9 pTM=0.371 ipTM=0.216 tol=6.43
2024-12-07 15:55:02,183 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=60 pTM=0.371 ipTM=0.213 tol=3.58
2024-12-07 15:56:30,613 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=60 pTM=0.372 ipTM=0.215 tol=2.33
2024-12-07 15:57:59,024 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=60.1 pTM=0.37 ipTM=0.212 tol=2.01
2024-12-07 15:57:59,026 alphafold2_multimer_v3_model_5_seed_000 took 2744.7s (30 recycles)
2024-12-07 15:58:01,185 reranking models by 'multimer' metric
2024-12-07 15:58:04,640 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 16:04:00,288 Relaxation took 359.1s
2024-12-07 16:04:00,288 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=59.1 pTM=0.389 ipTM=0.289
2024-12-07 16:11:41,665 Relaxation took 461.4s
2024-12-07 16:11:41,665 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=60.3 pTM=0.368 ipTM=0.239
2024-12-07 16:17:53,076 Relaxation took 371.4s
2024-12-07 16:17:53,076 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.5 pTM=0.348 ipTM=0.242
2024-12-07 16:24:19,671 Relaxation took 386.6s
2024-12-07 16:24:19,671 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.2 pTM=0.371 ipTM=0.231
2024-12-07 16:30:07,527 Relaxation took 347.9s
2024-12-07 16:30:07,527 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=60.1 pTM=0.37 ipTM=0.212
2024-12-07 16:30:12,349 Done