2024-12-07 12:28:02,630 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 12:28:02,949 Running on GPU
2024-12-07 12:28:06,391 Found 6 citations for tools or databases
2024-12-07 12:28:06,392 Query 1/1: PIAS4_ZMYM1 (length 1652)
2024-12-07 12:28:06,775 Sleeping for 10s. Reason: PENDING
2024-12-07 12:28:17,040 Sleeping for 8s. Reason: PENDING
2024-12-07 12:28:25,303 Sleeping for 10s. Reason: RUNNING
2024-12-07 12:28:35,561 Sleeping for 6s. Reason: RUNNING
2024-12-07 12:28:41,817 Sleeping for 6s. Reason: RUNNING
2024-12-07 12:28:48,081 Sleeping for 9s. Reason: RUNNING
2024-12-07 12:28:57,339 Sleeping for 10s. Reason: RUNNING
2024-12-07 12:29:07,602 Sleeping for 5s. Reason: RUNNING
2024-12-07 12:29:12,862 Sleeping for 6s. Reason: RUNNING
2024-12-07 12:29:19,116 Sleeping for 6s. Reason: RUNNING
2024-12-07 12:29:25,375 Sleeping for 6s. Reason: RUNNING
2024-12-07 12:29:31,635 Sleeping for 5s. Reason: RUNNING
2024-12-07 12:29:36,892 Sleeping for 8s. Reason: RUNNING
2024-12-07 12:29:45,147 Sleeping for 10s. Reason: RUNNING
2024-12-07 12:29:55,404 Sleeping for 6s. Reason: RUNNING
2024-12-07 12:30:01,663 Sleeping for 10s. Reason: RUNNING
2024-12-07 12:30:11,933 Sleeping for 8s. Reason: RUNNING
2024-12-07 12:30:20,190 Sleeping for 5s. Reason: RUNNING
2024-12-07 12:30:26,984 Sleeping for 7s. Reason: PENDING
2024-12-07 12:30:34,244 Sleeping for 9s. Reason: RUNNING
2024-12-07 12:30:43,513 Sleeping for 8s. Reason: RUNNING
2024-12-07 12:30:51,775 Sleeping for 7s. Reason: RUNNING
2024-12-07 12:30:59,038 Sleeping for 5s. Reason: RUNNING
2024-12-07 12:31:04,294 Sleeping for 8s. Reason: RUNNING
2024-12-07 12:31:12,554 Sleeping for 9s. Reason: RUNNING
2024-12-07 12:31:21,816 Sleeping for 8s. Reason: RUNNING
2024-12-07 12:31:30,080 Sleeping for 10s. Reason: RUNNING
2024-12-07 12:31:40,337 Sleeping for 7s. Reason: RUNNING
2024-12-07 12:31:50,864 Setting max_seq=508, max_extra_seq=2048
2024-12-07 12:35:32,372 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=56.9 pTM=0.408 ipTM=0.319
2024-12-07 12:36:59,941 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=57.2 pTM=0.408 ipTM=0.233 tol=11.9
2024-12-07 12:38:27,624 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=57.5 pTM=0.418 ipTM=0.204 tol=7.58
2024-12-07 12:39:55,354 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=57.7 pTM=0.417 ipTM=0.191 tol=6.05
2024-12-07 12:41:23,119 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=57.8 pTM=0.419 ipTM=0.182 tol=6.37
2024-12-07 12:42:50,867 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=57.5 pTM=0.419 ipTM=0.183 tol=4.19
2024-12-07 12:44:18,608 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=57.8 pTM=0.416 ipTM=0.186 tol=3.89
2024-12-07 12:45:46,322 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=57.7 pTM=0.416 ipTM=0.209 tol=4.48
2024-12-07 12:47:14,054 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=57.8 pTM=0.415 ipTM=0.185 tol=4.4
2024-12-07 12:48:41,752 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=57.8 pTM=0.418 ipTM=0.196 tol=4.82
2024-12-07 12:50:09,394 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=58 pTM=0.419 ipTM=0.199 tol=5.99
2024-12-07 12:51:37,068 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=57.9 pTM=0.418 ipTM=0.19 tol=5.96
2024-12-07 12:53:04,760 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=57.8 pTM=0.417 ipTM=0.197 tol=5.16
2024-12-07 12:54:32,450 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=58.2 pTM=0.419 ipTM=0.182 tol=2.92
2024-12-07 12:56:00,133 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=58.1 pTM=0.422 ipTM=0.181 tol=2.52
2024-12-07 12:57:27,806 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=57.9 pTM=0.423 ipTM=0.182 tol=2.85
2024-12-07 12:58:55,436 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=57.7 pTM=0.421 ipTM=0.194 tol=6.04
2024-12-07 13:00:23,104 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=58.1 pTM=0.42 ipTM=0.181 tol=3.77
2024-12-07 13:01:50,846 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=58.1 pTM=0.421 ipTM=0.181 tol=2.67
2024-12-07 13:03:18,555 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=58 pTM=0.419 ipTM=0.181 tol=5.52
2024-12-07 13:04:46,264 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=58.1 pTM=0.422 ipTM=0.182 tol=3.06
2024-12-07 13:06:13,985 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=58 pTM=0.423 ipTM=0.182 tol=2.27
2024-12-07 13:07:41,701 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=58.1 pTM=0.425 ipTM=0.185 tol=5.21
2024-12-07 13:09:09,404 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=58 pTM=0.422 ipTM=0.183 tol=2.94
2024-12-07 13:10:37,127 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=57.8 pTM=0.422 ipTM=0.196 tol=5.92
2024-12-07 13:12:04,825 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=57.9 pTM=0.422 ipTM=0.321 tol=5.32
2024-12-07 13:13:32,520 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=57.9 pTM=0.422 ipTM=0.281 tol=4.86
2024-12-07 13:15:00,220 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=58 pTM=0.424 ipTM=0.273 tol=5.21
2024-12-07 13:16:27,822 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=58.2 pTM=0.425 ipTM=0.315 tol=5.78
2024-12-07 13:17:55,373 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=58.3 pTM=0.424 ipTM=0.292 tol=6.86
2024-12-07 13:19:22,950 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=58.8 pTM=0.423 ipTM=0.407 tol=6.35
2024-12-07 13:19:22,952 alphafold2_multimer_v3_model_1_seed_000 took 2847.1s (30 recycles)
2024-12-07 13:20:52,094 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=57.8 pTM=0.416 ipTM=0.188
2024-12-07 13:22:19,799 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=59.1 pTM=0.44 ipTM=0.19 tol=15.4
2024-12-07 13:23:47,538 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=59.1 pTM=0.439 ipTM=0.173 tol=13.4
2024-12-07 13:25:15,381 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=59.5 pTM=0.436 ipTM=0.17 tol=9.28
2024-12-07 13:26:43,244 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=59.5 pTM=0.438 ipTM=0.171 tol=7.42
2024-12-07 13:28:11,089 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=59.7 pTM=0.438 ipTM=0.173 tol=9.05
2024-12-07 13:29:39,004 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=59.9 pTM=0.438 ipTM=0.176 tol=6.58
2024-12-07 13:31:06,844 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=59.7 pTM=0.438 ipTM=0.177 tol=4.75
2024-12-07 13:32:34,639 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=59.8 pTM=0.437 ipTM=0.175 tol=3.09
2024-12-07 13:34:02,441 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=60 pTM=0.438 ipTM=0.174 tol=2.79
2024-12-07 13:35:30,289 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=60 pTM=0.438 ipTM=0.174 tol=2.21
2024-12-07 13:36:58,149 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=59.9 pTM=0.438 ipTM=0.175 tol=4.12
2024-12-07 13:38:26,009 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=59.9 pTM=0.438 ipTM=0.175 tol=2.65
2024-12-07 13:39:53,873 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=59.9 pTM=0.438 ipTM=0.176 tol=2.88
2024-12-07 13:41:21,737 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=59.8 pTM=0.439 ipTM=0.177 tol=1.65
2024-12-07 13:42:49,604 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=59.9 pTM=0.436 ipTM=0.176 tol=2.65
2024-12-07 13:44:17,484 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=59.7 pTM=0.436 ipTM=0.177 tol=2.89
2024-12-07 13:45:45,355 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=59.9 pTM=0.436 ipTM=0.178 tol=4.95
2024-12-07 13:47:13,240 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=59.9 pTM=0.435 ipTM=0.179 tol=2.15
2024-12-07 13:48:41,075 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=59.9 pTM=0.436 ipTM=0.177 tol=2.59
2024-12-07 13:50:08,940 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=60 pTM=0.437 ipTM=0.175 tol=2.52
2024-12-07 13:51:36,826 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=59.8 pTM=0.437 ipTM=0.175 tol=3.33
2024-12-07 13:53:04,710 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=59.8 pTM=0.436 ipTM=0.173 tol=3.47
2024-12-07 13:54:32,600 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=59.7 pTM=0.435 ipTM=0.173 tol=3.69
2024-12-07 13:56:00,456 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=59.9 pTM=0.436 ipTM=0.173 tol=3.62
2024-12-07 13:57:28,307 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=60.1 pTM=0.436 ipTM=0.173 tol=4.54
2024-12-07 13:58:56,146 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60.1 pTM=0.438 ipTM=0.174 tol=3.64
2024-12-07 14:00:23,983 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=60.1 pTM=0.436 ipTM=0.173 tol=3.82
2024-12-07 14:01:51,833 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=59.8 pTM=0.434 ipTM=0.173 tol=2.8
2024-12-07 14:03:19,715 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=59.8 pTM=0.435 ipTM=0.174 tol=1.97
2024-12-07 14:04:47,628 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=59.8 pTM=0.436 ipTM=0.175 tol=2.09
2024-12-07 14:04:47,630 alphafold2_multimer_v3_model_2_seed_000 took 2723.1s (30 recycles)
2024-12-07 14:06:17,342 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=56.1 pTM=0.417 ipTM=0.181
2024-12-07 14:07:45,355 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=55.5 pTM=0.431 ipTM=0.222 tol=26.3
2024-12-07 14:09:13,306 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=57.9 pTM=0.439 ipTM=0.499 tol=20.2
2024-12-07 14:10:41,254 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=58.2 pTM=0.443 ipTM=0.313 tol=10.4
2024-12-07 14:12:09,225 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=58.4 pTM=0.444 ipTM=0.393 tol=10.3
2024-12-07 14:13:37,200 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57.8 pTM=0.442 ipTM=0.24 tol=6.05
2024-12-07 14:15:05,194 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=58.5 pTM=0.444 ipTM=0.412 tol=6.45
2024-12-07 14:16:33,148 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=58 pTM=0.442 ipTM=0.268 tol=4.55
2024-12-07 14:18:01,079 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=58.5 pTM=0.444 ipTM=0.417 tol=4.29
2024-12-07 14:19:29,074 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=58.2 pTM=0.444 ipTM=0.286 tol=4.17
2024-12-07 14:20:57,060 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=58.4 pTM=0.443 ipTM=0.396 tol=4.65
2024-12-07 14:22:25,059 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=58 pTM=0.442 ipTM=0.24 tol=4.87
2024-12-07 14:23:52,984 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=58.6 pTM=0.443 ipTM=0.42 tol=5.49
2024-12-07 14:25:20,873 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=58 pTM=0.443 ipTM=0.268 tol=5.81
2024-12-07 14:26:48,834 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=58.4 pTM=0.443 ipTM=0.424 tol=4.56
2024-12-07 14:28:16,764 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=58.1 pTM=0.442 ipTM=0.26 tol=4.29
2024-12-07 14:29:44,697 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=58.3 pTM=0.441 ipTM=0.386 tol=4.51
2024-12-07 14:31:12,648 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=58.1 pTM=0.441 ipTM=0.306 tol=4.64
2024-12-07 14:32:40,657 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=58.3 pTM=0.441 ipTM=0.369 tol=4.82
2024-12-07 14:34:08,645 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=58 pTM=0.441 ipTM=0.246 tol=3.38
2024-12-07 14:35:36,672 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=58.5 pTM=0.443 ipTM=0.426 tol=3.9
2024-12-07 14:37:04,719 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=58 pTM=0.442 ipTM=0.254 tol=3.65
2024-12-07 14:38:32,704 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=58.6 pTM=0.444 ipTM=0.416 tol=3.5
2024-12-07 14:40:00,689 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=58.1 pTM=0.443 ipTM=0.276 tol=3.42
2024-12-07 14:41:28,700 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=58.4 pTM=0.443 ipTM=0.41 tol=3.23
2024-12-07 14:42:56,719 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=57.9 pTM=0.442 ipTM=0.261 tol=3.79
2024-12-07 14:44:24,721 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=58.5 pTM=0.443 ipTM=0.418 tol=4.1
2024-12-07 14:45:52,707 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=58 pTM=0.443 ipTM=0.255 tol=3.51
2024-12-07 14:47:20,597 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=58.2 pTM=0.443 ipTM=0.387 tol=5.44
2024-12-07 14:48:48,490 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=57.8 pTM=0.442 ipTM=0.295 tol=6.03
2024-12-07 14:50:16,402 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=58.3 pTM=0.443 ipTM=0.408 tol=5.85
2024-12-07 14:50:16,404 alphafold2_multimer_v3_model_3_seed_000 took 2727.2s (30 recycles)
2024-12-07 14:51:46,050 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=56.5 pTM=0.413 ipTM=0.175
2024-12-07 14:53:13,999 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=56.7 pTM=0.421 ipTM=0.21 tol=14.8
2024-12-07 14:54:41,944 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=56.9 pTM=0.418 ipTM=0.23 tol=9.45
2024-12-07 14:56:09,978 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=57.2 pTM=0.418 ipTM=0.426 tol=7.49
2024-12-07 14:57:37,941 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57.2 pTM=0.417 ipTM=0.417 tol=7.31
2024-12-07 14:59:05,851 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57.3 pTM=0.419 ipTM=0.431 tol=9.27
2024-12-07 15:00:33,797 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.6 pTM=0.418 ipTM=0.423 tol=6.48
2024-12-07 15:02:01,748 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.7 pTM=0.42 ipTM=0.427 tol=6.29
2024-12-07 15:03:29,629 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=57.8 pTM=0.417 ipTM=0.434 tol=4.36
2024-12-07 15:04:57,580 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.7 pTM=0.417 ipTM=0.431 tol=4
2024-12-07 15:06:25,480 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.7 pTM=0.418 ipTM=0.429 tol=4.09
2024-12-07 15:07:53,367 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57.7 pTM=0.419 ipTM=0.423 tol=4.57
2024-12-07 15:09:21,212 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.8 pTM=0.42 ipTM=0.434 tol=5.23
2024-12-07 15:10:49,050 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=57.7 pTM=0.417 ipTM=0.42 tol=5.59
2024-12-07 15:12:16,919 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=57.6 pTM=0.416 ipTM=0.418 tol=4.63
2024-12-07 15:13:44,874 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=57.7 pTM=0.418 ipTM=0.41 tol=4.21
2024-12-07 15:15:12,789 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=57.8 pTM=0.418 ipTM=0.424 tol=3.5
2024-12-07 15:16:40,762 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=57.6 pTM=0.414 ipTM=0.417 tol=5.15
2024-12-07 15:18:08,751 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=57.7 pTM=0.415 ipTM=0.416 tol=5.01
2024-12-07 15:19:36,745 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=57.3 pTM=0.413 ipTM=0.386 tol=5.86
2024-12-07 15:21:04,674 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=57.8 pTM=0.415 ipTM=0.424 tol=5.86
2024-12-07 15:22:32,610 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=57.7 pTM=0.414 ipTM=0.416 tol=5.38
2024-12-07 15:24:00,483 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=57.8 pTM=0.416 ipTM=0.412 tol=4.71
2024-12-07 15:25:28,367 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=57.7 pTM=0.412 ipTM=0.42 tol=3.53
2024-12-07 15:26:56,291 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=57.9 pTM=0.416 ipTM=0.43 tol=4.31
2024-12-07 15:28:24,310 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57.8 pTM=0.415 ipTM=0.412 tol=3.81
2024-12-07 15:29:52,322 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57.7 pTM=0.415 ipTM=0.42 tol=3.09
2024-12-07 15:31:20,353 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=57.8 pTM=0.414 ipTM=0.406 tol=2.87
2024-12-07 15:32:48,350 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=57.6 pTM=0.413 ipTM=0.421 tol=6.09
2024-12-07 15:34:16,352 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57.5 pTM=0.412 ipTM=0.401 tol=5
2024-12-07 15:35:44,347 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=57.7 pTM=0.413 ipTM=0.426 tol=3.69
2024-12-07 15:35:44,348 alphafold2_multimer_v3_model_4_seed_000 took 2726.3s (30 recycles)
2024-12-07 15:37:13,908 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=55.7 pTM=0.417 ipTM=0.176
2024-12-07 15:38:41,783 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=56.9 pTM=0.432 ipTM=0.176 tol=14.3
2024-12-07 15:40:09,649 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58.3 pTM=0.438 ipTM=0.229 tol=12.6
2024-12-07 15:41:37,588 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=58.1 pTM=0.441 ipTM=0.227 tol=9.13
2024-12-07 15:43:05,554 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.2 pTM=0.439 ipTM=0.204 tol=7.26
2024-12-07 15:44:33,510 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=58.3 pTM=0.442 ipTM=0.194 tol=7.62
2024-12-07 15:46:01,487 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=60 pTM=0.441 ipTM=0.462 tol=12.3
2024-12-07 15:47:29,492 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=59.9 pTM=0.441 ipTM=0.442 tol=8.39
2024-12-07 15:48:57,455 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=59.7 pTM=0.441 ipTM=0.449 tol=6.3
2024-12-07 15:50:25,330 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=59.8 pTM=0.441 ipTM=0.449 tol=4.5
2024-12-07 15:51:53,223 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=59.9 pTM=0.441 ipTM=0.453 tol=4.18
2024-12-07 15:53:21,185 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59.8 pTM=0.441 ipTM=0.459 tol=3.52
2024-12-07 15:54:49,142 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=59.6 pTM=0.442 ipTM=0.455 tol=6.1
2024-12-07 15:56:17,145 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=59.6 pTM=0.442 ipTM=0.45 tol=5
2024-12-07 15:57:45,133 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=59.6 pTM=0.443 ipTM=0.446 tol=3.05
2024-12-07 15:59:13,108 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=59.7 pTM=0.441 ipTM=0.45 tol=2.58
2024-12-07 16:00:41,063 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=60 pTM=0.443 ipTM=0.453 tol=5.42
2024-12-07 16:02:09,060 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=59.7 pTM=0.441 ipTM=0.457 tol=4.88
2024-12-07 16:03:37,044 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=59.8 pTM=0.442 ipTM=0.454 tol=2.34
2024-12-07 16:05:04,994 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=59.8 pTM=0.442 ipTM=0.446 tol=5.13
2024-12-07 16:06:32,984 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=60.1 pTM=0.442 ipTM=0.452 tol=4.76
2024-12-07 16:08:00,955 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=59.6 pTM=0.442 ipTM=0.447 tol=2.74
2024-12-07 16:09:28,918 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=59.7 pTM=0.443 ipTM=0.444 tol=1.98
2024-12-07 16:10:56,882 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=59.7 pTM=0.442 ipTM=0.447 tol=2.88
2024-12-07 16:12:24,830 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59.5 pTM=0.441 ipTM=0.445 tol=1.36
2024-12-07 16:13:52,827 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=59.4 pTM=0.441 ipTM=0.443 tol=2.87
2024-12-07 16:15:20,830 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=59.3 pTM=0.44 ipTM=0.437 tol=5.11
2024-12-07 16:16:48,815 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=59.4 pTM=0.441 ipTM=0.445 tol=2.85
2024-12-07 16:18:16,772 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=59.3 pTM=0.44 ipTM=0.442 tol=4.35
2024-12-07 16:19:44,749 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=59.3 pTM=0.44 ipTM=0.443 tol=2.86
2024-12-07 16:21:12,741 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59.5 pTM=0.442 ipTM=0.445 tol=2.8
2024-12-07 16:21:12,742 alphafold2_multimer_v3_model_5_seed_000 took 2726.8s (30 recycles)
2024-12-07 16:21:14,345 reranking models by 'multimer' metric
2024-12-07 16:21:17,320 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 16:24:28,662 Relaxation took 194.3s
2024-12-07 16:24:28,662 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59.5 pTM=0.442 ipTM=0.445
2024-12-07 16:27:12,178 Relaxation took 163.5s
2024-12-07 16:27:12,178 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=57.7 pTM=0.413 ipTM=0.426
2024-12-07 16:30:48,489 Relaxation took 216.3s
2024-12-07 16:30:48,489 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=58.3 pTM=0.443 ipTM=0.408
2024-12-07 16:34:38,706 Relaxation took 230.2s
2024-12-07 16:34:38,707 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=58.8 pTM=0.423 ipTM=0.407
2024-12-07 16:37:28,216 Relaxation took 169.5s
2024-12-07 16:37:28,216 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=59.8 pTM=0.436 ipTM=0.175
2024-12-07 16:37:31,989 Done