2024-12-07 12:37:55,057 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 12:37:55,429 Running on GPU
2024-12-07 12:37:59,124 Found 6 citations for tools or databases
2024-12-07 12:37:59,124 Query 1/1: PJA1_ENTPD1 (length 1153)
2024-12-07 12:38:06,091 Setting max_seq=508, max_extra_seq=2048
2024-12-07 12:42:13,584 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=50.7 pTM=0.459 ipTM=0.227
2024-12-07 12:42:49,830 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=50.1 pTM=0.46 ipTM=0.218 tol=12.5
2024-12-07 12:43:26,233 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=50.3 pTM=0.462 ipTM=0.243 tol=9.11
2024-12-07 12:44:02,680 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=50.5 pTM=0.46 ipTM=0.255 tol=7.29
2024-12-07 12:44:39,191 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=50.2 pTM=0.457 ipTM=0.27 tol=5.64
2024-12-07 12:45:15,762 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=50.4 pTM=0.461 ipTM=0.274 tol=7.09
2024-12-07 12:45:52,338 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=50.7 pTM=0.462 ipTM=0.288 tol=5.74
2024-12-07 12:46:28,912 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=50.5 pTM=0.458 ipTM=0.265 tol=4.49
2024-12-07 12:47:05,478 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=50.5 pTM=0.459 ipTM=0.258 tol=3.8
2024-12-07 12:47:42,023 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=50.8 pTM=0.459 ipTM=0.262 tol=6.49
2024-12-07 12:48:18,511 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=50.2 pTM=0.455 ipTM=0.257 tol=6.45
2024-12-07 12:48:55,016 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=50.8 pTM=0.465 ipTM=0.264 tol=6.35
2024-12-07 12:49:31,516 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=51.3 pTM=0.469 ipTM=0.281 tol=7.15
2024-12-07 12:50:08,035 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=50.5 pTM=0.46 ipTM=0.275 tol=6.2
2024-12-07 12:50:44,603 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=50.6 pTM=0.463 ipTM=0.272 tol=4.8
2024-12-07 12:51:21,174 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=51.1 pTM=0.466 ipTM=0.274 tol=5.21
2024-12-07 12:51:57,739 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=50.5 pTM=0.458 ipTM=0.271 tol=3.74
2024-12-07 12:52:34,345 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=50.8 pTM=0.462 ipTM=0.267 tol=8.2
2024-12-07 12:53:10,966 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=50.8 pTM=0.457 ipTM=0.264 tol=4.58
2024-12-07 12:53:47,607 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=50.5 pTM=0.457 ipTM=0.277 tol=5.18
2024-12-07 12:54:24,249 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=50.5 pTM=0.459 ipTM=0.272 tol=4.52
2024-12-07 12:55:00,858 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=50.8 pTM=0.459 ipTM=0.283 tol=4.05
2024-12-07 12:55:37,455 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=50.5 pTM=0.457 ipTM=0.28 tol=4.05
2024-12-07 12:56:14,096 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=50.6 pTM=0.458 ipTM=0.275 tol=5.72
2024-12-07 12:56:50,726 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=50.3 pTM=0.457 ipTM=0.27 tol=3.87
2024-12-07 12:57:27,343 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=50.5 pTM=0.458 ipTM=0.275 tol=3.01
2024-12-07 12:58:03,934 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=50.7 pTM=0.458 ipTM=0.273 tol=3.99
2024-12-07 12:58:40,547 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=50.4 pTM=0.456 ipTM=0.274 tol=2.76
2024-12-07 12:59:17,210 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=50.6 pTM=0.461 ipTM=0.276 tol=3.12
2024-12-07 12:59:53,828 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=51 pTM=0.462 ipTM=0.281 tol=3.89
2024-12-07 13:00:30,423 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=50.5 pTM=0.456 ipTM=0.281 tol=4.13
2024-12-07 13:00:30,424 alphafold2_multimer_v3_model_1_seed_000 took 1337.8s (30 recycles)
2024-12-07 13:01:08,060 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=50.7 pTM=0.467 ipTM=0.309
2024-12-07 13:01:44,735 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=50.6 pTM=0.469 ipTM=0.299 tol=13.6
2024-12-07 13:02:21,398 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=51 pTM=0.474 ipTM=0.282 tol=5.97
2024-12-07 13:02:57,996 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=51 pTM=0.469 ipTM=0.246 tol=6.98
2024-12-07 13:03:34,571 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=50.4 pTM=0.459 ipTM=0.25 tol=4.61
2024-12-07 13:04:11,161 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=50.8 pTM=0.464 ipTM=0.252 tol=5.53
2024-12-07 13:04:47,758 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=50.8 pTM=0.463 ipTM=0.264 tol=4.04
2024-12-07 13:05:24,384 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=50.8 pTM=0.464 ipTM=0.255 tol=3.22
2024-12-07 13:06:01,000 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=50.8 pTM=0.464 ipTM=0.245 tol=3.04
2024-12-07 13:06:37,626 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=51.1 pTM=0.469 ipTM=0.274 tol=2.89
2024-12-07 13:07:14,245 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=50.9 pTM=0.462 ipTM=0.255 tol=1.91
2024-12-07 13:07:50,894 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=50.9 pTM=0.466 ipTM=0.258 tol=2.06
2024-12-07 13:08:27,548 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=51 pTM=0.463 ipTM=0.261 tol=5.08
2024-12-07 13:09:04,179 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=50.8 pTM=0.467 ipTM=0.262 tol=2.97
2024-12-07 13:09:40,782 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=50.5 pTM=0.463 ipTM=0.256 tol=6.95
2024-12-07 13:10:17,384 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=50.8 pTM=0.465 ipTM=0.264 tol=6.95
2024-12-07 13:10:53,958 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=50.8 pTM=0.458 ipTM=0.243 tol=5.96
2024-12-07 13:11:30,503 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=50.9 pTM=0.463 ipTM=0.246 tol=2.96
2024-12-07 13:12:07,044 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=50.7 pTM=0.457 ipTM=0.236 tol=5.45
2024-12-07 13:12:43,583 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=50.6 pTM=0.459 ipTM=0.249 tol=5.21
2024-12-07 13:13:20,163 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=50.5 pTM=0.457 ipTM=0.241 tol=4.99
2024-12-07 13:13:56,746 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=50.8 pTM=0.46 ipTM=0.253 tol=5.54
2024-12-07 13:14:33,337 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=50.5 pTM=0.461 ipTM=0.251 tol=7.88
2024-12-07 13:15:09,957 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=51 pTM=0.464 ipTM=0.264 tol=6.21
2024-12-07 13:15:46,572 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=50.6 pTM=0.458 ipTM=0.24 tol=2.2
2024-12-07 13:16:23,171 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=50.7 pTM=0.46 ipTM=0.24 tol=2.41
2024-12-07 13:16:59,785 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=50.4 pTM=0.455 ipTM=0.236 tol=1.94
2024-12-07 13:17:36,384 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=50.5 pTM=0.458 ipTM=0.239 tol=2.38
2024-12-07 13:18:12,978 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=50.8 pTM=0.459 ipTM=0.242 tol=5.44
2024-12-07 13:18:49,596 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=50.8 pTM=0.461 ipTM=0.247 tol=4.87
2024-12-07 13:19:26,241 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=51 pTM=0.461 ipTM=0.243 tol=2.22
2024-12-07 13:19:26,242 alphafold2_multimer_v3_model_2_seed_000 took 1134.8s (30 recycles)
2024-12-07 13:20:04,061 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=49.6 pTM=0.453 ipTM=0.268
2024-12-07 13:20:40,925 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=49.5 pTM=0.459 ipTM=0.229 tol=13.6
2024-12-07 13:21:17,816 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=49 pTM=0.448 ipTM=0.243 tol=10.4
2024-12-07 13:21:54,703 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=49.2 pTM=0.454 ipTM=0.249 tol=8
2024-12-07 13:22:31,595 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=49.9 pTM=0.453 ipTM=0.253 tol=5.99
2024-12-07 13:23:08,453 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=49.8 pTM=0.452 ipTM=0.272 tol=4.92
2024-12-07 13:23:45,249 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=49.3 pTM=0.448 ipTM=0.277 tol=4.16
2024-12-07 13:24:22,082 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=49.6 pTM=0.456 ipTM=0.283 tol=2.71
2024-12-07 13:24:58,860 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=50.1 pTM=0.456 ipTM=0.283 tol=4.1
2024-12-07 13:25:35,582 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=49.4 pTM=0.449 ipTM=0.279 tol=3.7
2024-12-07 13:26:12,324 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=49.6 pTM=0.455 ipTM=0.276 tol=2.57
2024-12-07 13:26:49,088 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=50.2 pTM=0.458 ipTM=0.28 tol=3.49
2024-12-07 13:27:25,802 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=49.6 pTM=0.452 ipTM=0.278 tol=2.75
2024-12-07 13:28:02,551 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=49.6 pTM=0.456 ipTM=0.283 tol=2.35
2024-12-07 13:28:39,302 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=50.2 pTM=0.457 ipTM=0.291 tol=2.41
2024-12-07 13:29:16,052 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=49.5 pTM=0.45 ipTM=0.291 tol=2.5
2024-12-07 13:29:52,828 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=49.7 pTM=0.457 ipTM=0.286 tol=2.14
2024-12-07 13:30:29,594 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=50.2 pTM=0.457 ipTM=0.284 tol=2.77
2024-12-07 13:31:06,339 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=49.6 pTM=0.45 ipTM=0.281 tol=2.29
2024-12-07 13:31:43,108 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=49.8 pTM=0.456 ipTM=0.297 tol=2.02
2024-12-07 13:32:19,856 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=50.1 pTM=0.458 ipTM=0.299 tol=1.88
2024-12-07 13:32:56,592 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=49.8 pTM=0.453 ipTM=0.306 tol=4.98
2024-12-07 13:33:33,352 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=50 pTM=0.458 ipTM=0.303 tol=4.25
2024-12-07 13:34:10,101 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=50 pTM=0.454 ipTM=0.294 tol=1.51
2024-12-07 13:34:46,851 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=49.6 pTM=0.452 ipTM=0.29 tol=1.37
2024-12-07 13:35:23,595 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=49.8 pTM=0.453 ipTM=0.291 tol=1.38
2024-12-07 13:36:00,335 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=49.7 pTM=0.453 ipTM=0.292 tol=1.3
2024-12-07 13:36:37,069 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=49.6 pTM=0.452 ipTM=0.292 tol=1.05
2024-12-07 13:37:13,788 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=49.8 pTM=0.454 ipTM=0.295 tol=1.36
2024-12-07 13:37:50,493 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=49.7 pTM=0.453 ipTM=0.287 tol=1.56
2024-12-07 13:38:27,201 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=49.9 pTM=0.453 ipTM=0.298 tol=1.45
2024-12-07 13:38:27,202 alphafold2_multimer_v3_model_3_seed_000 took 1139.9s (30 recycles)
2024-12-07 13:39:04,930 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=49.2 pTM=0.466 ipTM=0.205
2024-12-07 13:39:41,605 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=49.5 pTM=0.471 ipTM=0.301 tol=14.4
2024-12-07 13:40:18,376 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=49 pTM=0.456 ipTM=0.224 tol=12.6
2024-12-07 13:40:55,132 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=50 pTM=0.461 ipTM=0.228 tol=6.89
2024-12-07 13:41:31,857 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=49.3 pTM=0.457 ipTM=0.265 tol=8.31
2024-12-07 13:42:08,630 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=49.5 pTM=0.461 ipTM=0.29 tol=9.12
2024-12-07 13:42:45,367 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=49.4 pTM=0.46 ipTM=0.295 tol=10.2
2024-12-07 13:43:22,135 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=49.3 pTM=0.459 ipTM=0.303 tol=9.92
2024-12-07 13:43:58,932 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.9 pTM=0.456 ipTM=0.295 tol=9.09
2024-12-07 13:44:35,740 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=49.5 pTM=0.461 ipTM=0.325 tol=8.57
2024-12-07 13:45:12,506 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=50.3 pTM=0.474 ipTM=0.353 tol=4.14
2024-12-07 13:45:49,205 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=49.8 pTM=0.464 ipTM=0.357 tol=6.11
2024-12-07 13:46:25,942 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=50 pTM=0.475 ipTM=0.383 tol=11.4
2024-12-07 13:47:02,663 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=50.3 pTM=0.474 ipTM=0.356 tol=8.58
2024-12-07 13:47:39,373 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=49.8 pTM=0.467 ipTM=0.357 tol=5.32
2024-12-07 13:48:16,097 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=49.9 pTM=0.47 ipTM=0.358 tol=2.91
2024-12-07 13:48:52,810 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=49.8 pTM=0.468 ipTM=0.351 tol=2.28
2024-12-07 13:49:29,561 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=49.8 pTM=0.468 ipTM=0.336 tol=2.01
2024-12-07 13:50:06,282 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=49.8 pTM=0.467 ipTM=0.339 tol=2.89
2024-12-07 13:50:43,011 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=50.3 pTM=0.472 ipTM=0.36 tol=2.41
2024-12-07 13:51:19,702 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=49.7 pTM=0.465 ipTM=0.333 tol=2.2
2024-12-07 13:51:56,420 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=49.8 pTM=0.468 ipTM=0.363 tol=2.5
2024-12-07 13:52:33,114 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=50 pTM=0.468 ipTM=0.357 tol=6.81
2024-12-07 13:53:09,786 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=50 pTM=0.467 ipTM=0.365 tol=6.75
2024-12-07 13:53:46,485 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=49.8 pTM=0.466 ipTM=0.347 tol=2.31
2024-12-07 13:54:23,163 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=49.8 pTM=0.464 ipTM=0.359 tol=6.89
2024-12-07 13:54:59,859 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=49.7 pTM=0.464 ipTM=0.352 tol=2.17
2024-12-07 13:55:36,535 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=50.2 pTM=0.473 ipTM=0.34 tol=6.71
2024-12-07 13:56:13,230 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=50.3 pTM=0.47 ipTM=0.32 tol=2.33
2024-12-07 13:56:49,969 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=49.8 pTM=0.467 ipTM=0.344 tol=2.71
2024-12-07 13:57:26,664 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=50 pTM=0.463 ipTM=0.346 tol=8.39
2024-12-07 13:57:26,665 alphafold2_multimer_v3_model_4_seed_000 took 1138.4s (30 recycles)
2024-12-07 13:58:04,555 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=49.9 pTM=0.454 ipTM=0.237
2024-12-07 13:58:41,426 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=48.8 pTM=0.45 ipTM=0.21 tol=14.2
2024-12-07 13:59:18,349 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=48.9 pTM=0.447 ipTM=0.242 tol=9.64
2024-12-07 13:59:55,285 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=49.2 pTM=0.451 ipTM=0.266 tol=7.59
2024-12-07 14:00:32,187 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=50.1 pTM=0.452 ipTM=0.277 tol=6.64
2024-12-07 14:01:09,055 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=49.1 pTM=0.449 ipTM=0.285 tol=4.68
2024-12-07 14:01:45,987 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=49.5 pTM=0.451 ipTM=0.285 tol=8.83
2024-12-07 14:02:22,920 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=49.8 pTM=0.455 ipTM=0.287 tol=8.09
2024-12-07 14:02:59,861 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=49.6 pTM=0.45 ipTM=0.288 tol=9.49
2024-12-07 14:03:36,820 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=49.6 pTM=0.452 ipTM=0.29 tol=8.25
2024-12-07 14:04:13,734 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=49.8 pTM=0.451 ipTM=0.286 tol=5.18
2024-12-07 14:04:50,594 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=49.4 pTM=0.448 ipTM=0.293 tol=6.07
2024-12-07 14:05:27,497 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=49.3 pTM=0.452 ipTM=0.292 tol=4.73
2024-12-07 14:06:04,386 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=49.8 pTM=0.45 ipTM=0.283 tol=4.66
2024-12-07 14:06:41,260 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=49.1 pTM=0.449 ipTM=0.287 tol=5.95
2024-12-07 14:07:18,187 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=49.3 pTM=0.451 ipTM=0.286 tol=6.27
2024-12-07 14:07:55,104 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=49.6 pTM=0.453 ipTM=0.284 tol=9.56
2024-12-07 14:08:32,013 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=49.7 pTM=0.45 ipTM=0.289 tol=7.36
2024-12-07 14:09:08,968 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=49.5 pTM=0.453 ipTM=0.294 tol=8.29
2024-12-07 14:09:45,921 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=49.6 pTM=0.453 ipTM=0.293 tol=9.94
2024-12-07 14:10:22,832 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=49.3 pTM=0.45 ipTM=0.294 tol=3.97
2024-12-07 14:10:59,750 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=49.4 pTM=0.454 ipTM=0.297 tol=3.84
2024-12-07 14:11:36,604 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=49.7 pTM=0.453 ipTM=0.301 tol=4.31
2024-12-07 14:12:13,432 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=49.2 pTM=0.449 ipTM=0.29 tol=3.63
2024-12-07 14:12:50,301 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=49.3 pTM=0.452 ipTM=0.286 tol=3.43
2024-12-07 14:13:27,120 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=49.8 pTM=0.452 ipTM=0.292 tol=3.75
2024-12-07 14:14:03,968 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=49.1 pTM=0.45 ipTM=0.295 tol=2.91
2024-12-07 14:14:40,885 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=49.3 pTM=0.453 ipTM=0.294 tol=6.41
2024-12-07 14:15:17,803 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=49.4 pTM=0.454 ipTM=0.289 tol=5.85
2024-12-07 14:15:54,711 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=49.8 pTM=0.453 ipTM=0.294 tol=3.87
2024-12-07 14:16:31,590 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=49.2 pTM=0.449 ipTM=0.293 tol=2.96
2024-12-07 14:16:31,591 alphafold2_multimer_v3_model_5_seed_000 took 1143.9s (30 recycles)
2024-12-07 14:16:32,620 reranking models by 'multimer' metric
2024-12-07 14:16:33,929 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 14:18:36,536 Relaxation took 123.9s
2024-12-07 14:18:36,537 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=50 pTM=0.463 ipTM=0.346
2024-12-07 14:20:21,069 Relaxation took 104.5s
2024-12-07 14:20:21,070 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=49.9 pTM=0.453 ipTM=0.298
2024-12-07 14:23:46,286 Relaxation took 205.2s
2024-12-07 14:23:46,286 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=49.2 pTM=0.449 ipTM=0.293
2024-12-07 14:25:55,033 Relaxation took 128.7s
2024-12-07 14:25:55,034 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=50.5 pTM=0.456 ipTM=0.281
2024-12-07 14:27:49,644 Relaxation took 114.6s
2024-12-07 14:27:49,644 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=51 pTM=0.461 ipTM=0.243
2024-12-07 14:27:52,161 Done