2024-12-07 14:18:00,113 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-07 14:18:00,428 Running on GPU 2024-12-07 14:18:04,246 Found 6 citations for tools or databases 2024-12-07 14:18:04,246 Query 1/1: PRC1_PPP1R13L (length 1448) 2024-12-07 14:18:04,526 Sleeping for 8s. Reason: PENDING 2024-12-07 14:18:12,789 Sleeping for 7s. Reason: PENDING 2024-12-07 14:18:20,045 Sleeping for 8s. Reason: PENDING 2024-12-07 14:18:28,303 Sleeping for 5s. Reason: PENDING 2024-12-07 14:18:33,557 Sleeping for 5s. Reason: PENDING 2024-12-07 14:18:38,809 Sleeping for 8s. Reason: PENDING 2024-12-07 14:18:47,068 Sleeping for 5s. Reason: PENDING 2024-12-07 14:18:52,322 Sleeping for 7s. Reason: RUNNING 2024-12-07 14:18:59,588 Sleeping for 6s. Reason: RUNNING 2024-12-07 14:19:05,846 Sleeping for 10s. Reason: RUNNING 2024-12-07 14:19:16,257 Sleeping for 5s. Reason: RUNNING 2024-12-07 14:19:21,523 Sleeping for 9s. Reason: RUNNING 2024-12-07 14:19:30,781 Sleeping for 5s. Reason: RUNNING 2024-12-07 14:19:36,036 Sleeping for 7s. Reason: RUNNING 2024-12-07 14:19:43,296 Sleeping for 8s. Reason: RUNNING 2024-12-07 14:19:51,554 Sleeping for 9s. Reason: RUNNING 2024-12-07 14:20:00,813 Sleeping for 5s. Reason: RUNNING 2024-12-07 14:20:06,071 Sleeping for 6s. Reason: RUNNING 2024-12-07 14:20:12,330 Sleeping for 6s. Reason: RUNNING 2024-12-07 14:20:18,597 Sleeping for 9s. Reason: RUNNING 2024-12-07 14:20:27,857 Sleeping for 9s. Reason: RUNNING 2024-12-07 14:20:37,119 Sleeping for 7s. Reason: RUNNING 2024-12-07 14:20:44,375 Sleeping for 9s. Reason: RUNNING 2024-12-07 14:20:53,634 Sleeping for 9s. Reason: RUNNING 2024-12-07 14:21:04,447 Sleeping for 5s. Reason: PENDING 2024-12-07 14:21:09,713 Sleeping for 6s. Reason: PENDING 2024-12-07 14:21:15,971 Sleeping for 10s. Reason: PENDING 2024-12-07 14:21:26,238 Sleeping for 7s. Reason: PENDING 2024-12-07 14:21:33,521 Sleeping for 6s. Reason: RUNNING 2024-12-07 14:21:39,777 Sleeping for 8s. Reason: RUNNING 2024-12-07 14:21:48,032 Sleeping for 9s. Reason: RUNNING 2024-12-07 14:21:57,291 Sleeping for 7s. Reason: RUNNING 2024-12-07 14:22:04,544 Sleeping for 9s. Reason: RUNNING 2024-12-07 14:22:13,799 Sleeping for 8s. Reason: RUNNING 2024-12-07 14:22:22,052 Sleeping for 9s. Reason: RUNNING 2024-12-07 14:22:31,316 Sleeping for 6s. Reason: RUNNING 2024-12-07 14:22:37,573 Sleeping for 7s. Reason: RUNNING 2024-12-07 14:22:44,831 Sleeping for 6s. Reason: RUNNING 2024-12-07 14:22:51,081 Sleeping for 6s. Reason: RUNNING 2024-12-07 14:22:57,342 Sleeping for 9s. Reason: RUNNING 2024-12-07 14:23:10,026 Setting max_seq=508, max_extra_seq=2048 2024-12-07 14:26:06,593 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=49.5 pTM=0.312 ipTM=0.167 2024-12-07 14:27:04,837 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=49.5 pTM=0.32 ipTM=0.179 tol=21.3 2024-12-07 14:28:03,108 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=49.4 pTM=0.311 ipTM=0.165 tol=18.6 2024-12-07 14:29:01,423 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=49.3 pTM=0.312 ipTM=0.191 tol=20.3 2024-12-07 14:29:59,739 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=49.3 pTM=0.312 ipTM=0.247 tol=11.9 2024-12-07 14:30:58,058 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=49.2 pTM=0.316 ipTM=0.283 tol=13.7 2024-12-07 14:31:56,400 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=49.1 pTM=0.314 ipTM=0.301 tol=20.2 2024-12-07 14:32:54,709 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=49.2 pTM=0.316 ipTM=0.312 tol=15.1 2024-12-07 14:33:53,047 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=49.5 pTM=0.319 ipTM=0.333 tol=10.4 2024-12-07 14:34:51,391 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=49.5 pTM=0.321 ipTM=0.33 tol=15.1 2024-12-07 14:35:49,730 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=49.5 pTM=0.32 ipTM=0.342 tol=12.6 2024-12-07 14:36:48,071 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=49.4 pTM=0.321 ipTM=0.332 tol=8.95 2024-12-07 14:37:46,400 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=49.2 pTM=0.319 ipTM=0.324 tol=14.1 2024-12-07 14:38:44,726 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=49.1 pTM=0.315 ipTM=0.335 tol=20.4 2024-12-07 14:39:43,037 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=49.5 pTM=0.318 ipTM=0.328 tol=14.8 2024-12-07 14:40:41,348 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=49.4 pTM=0.319 ipTM=0.33 tol=7.89 2024-12-07 14:41:39,690 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=49.4 pTM=0.319 ipTM=0.338 tol=8.2 2024-12-07 14:42:38,016 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=49.5 pTM=0.321 ipTM=0.341 tol=7.75 2024-12-07 14:43:36,334 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=49.5 pTM=0.318 ipTM=0.333 tol=7.28 2024-12-07 14:44:34,626 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=49.3 pTM=0.319 ipTM=0.339 tol=10.3 2024-12-07 14:45:32,918 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=49.4 pTM=0.316 ipTM=0.321 tol=7.4 2024-12-07 14:46:31,187 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=49.4 pTM=0.316 ipTM=0.323 tol=6.05 2024-12-07 14:47:29,413 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=49.4 pTM=0.316 ipTM=0.322 tol=8.6 2024-12-07 14:48:27,683 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=49.5 pTM=0.318 ipTM=0.334 tol=9.76 2024-12-07 14:49:25,954 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=49.1 pTM=0.316 ipTM=0.321 tol=9.27 2024-12-07 14:50:24,194 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=49.4 pTM=0.317 ipTM=0.342 tol=8.48 2024-12-07 14:51:22,450 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=49.3 pTM=0.317 ipTM=0.336 tol=6.89 2024-12-07 14:52:20,720 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=49.2 pTM=0.316 ipTM=0.332 tol=7.35 2024-12-07 14:53:19,009 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=49.2 pTM=0.316 ipTM=0.324 tol=5.52 2024-12-07 14:54:17,352 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=49.2 pTM=0.317 ipTM=0.325 tol=13.2 2024-12-07 14:55:15,681 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=49.2 pTM=0.315 ipTM=0.319 tol=12.6 2024-12-07 14:55:15,682 alphafold2_multimer_v3_model_1_seed_000 took 1920.7s (30 recycles) 2024-12-07 14:56:15,351 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=48.6 pTM=0.313 ipTM=0.194 2024-12-07 14:57:13,803 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=49.1 pTM=0.326 ipTM=0.223 tol=22.7 2024-12-07 14:58:12,113 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=49.2 pTM=0.33 ipTM=0.207 tol=16.5 2024-12-07 14:59:10,432 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=49.3 pTM=0.327 ipTM=0.203 tol=13.9 2024-12-07 15:00:08,800 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=49.3 pTM=0.323 ipTM=0.249 tol=8.66 2024-12-07 15:01:07,165 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=49.2 pTM=0.323 ipTM=0.217 tol=5.25 2024-12-07 15:02:05,509 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=49.3 pTM=0.328 ipTM=0.221 tol=14.3 2024-12-07 15:03:03,848 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=49.2 pTM=0.325 ipTM=0.211 tol=9.16 2024-12-07 15:04:02,174 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=49.5 pTM=0.328 ipTM=0.221 tol=15.2 2024-12-07 15:05:00,489 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=49.9 pTM=0.333 ipTM=0.257 tol=19.6 2024-12-07 15:05:58,817 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=49.9 pTM=0.332 ipTM=0.301 tol=17.8 2024-12-07 15:06:57,138 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=50.3 pTM=0.339 ipTM=0.298 tol=15.8 2024-12-07 15:07:55,435 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=50.1 pTM=0.338 ipTM=0.305 tol=9.68 2024-12-07 15:08:53,732 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=50.1 pTM=0.335 ipTM=0.313 tol=8.14 2024-12-07 15:09:52,022 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=50.2 pTM=0.334 ipTM=0.303 tol=8.79 2024-12-07 15:10:50,327 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=50.1 pTM=0.335 ipTM=0.313 tol=4.82 2024-12-07 15:11:48,634 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=49.8 pTM=0.333 ipTM=0.32 tol=6.43 2024-12-07 15:12:47,000 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=50.1 pTM=0.336 ipTM=0.314 tol=6.01 2024-12-07 15:13:45,390 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=50.1 pTM=0.338 ipTM=0.322 tol=5.69 2024-12-07 15:14:43,738 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=50.2 pTM=0.335 ipTM=0.327 tol=5.91 2024-12-07 15:15:42,057 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=50.2 pTM=0.334 ipTM=0.323 tol=6.04 2024-12-07 15:16:40,372 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=50.2 pTM=0.334 ipTM=0.321 tol=6.25 2024-12-07 15:17:38,755 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=50.2 pTM=0.334 ipTM=0.32 tol=10.5 2024-12-07 15:18:37,122 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=50.3 pTM=0.337 ipTM=0.326 tol=8 2024-12-07 15:19:35,486 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=50 pTM=0.333 ipTM=0.313 tol=4.72 2024-12-07 15:20:33,842 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=50.1 pTM=0.336 ipTM=0.332 tol=6 2024-12-07 15:21:32,211 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=50.2 pTM=0.337 ipTM=0.324 tol=6.15 2024-12-07 15:22:30,568 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=50.1 pTM=0.336 ipTM=0.325 tol=5.83 2024-12-07 15:23:28,910 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=50.1 pTM=0.334 ipTM=0.323 tol=5.66 2024-12-07 15:24:27,254 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=50 pTM=0.332 ipTM=0.317 tol=7.14 2024-12-07 15:25:25,575 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=50.1 pTM=0.334 ipTM=0.313 tol=8.25 2024-12-07 15:25:25,576 alphafold2_multimer_v3_model_2_seed_000 took 1808.6s (30 recycles) 2024-12-07 15:26:25,345 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=48 pTM=0.315 ipTM=0.186 2024-12-07 15:27:23,915 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=47.9 pTM=0.313 ipTM=0.17 tol=18.5 2024-12-07 15:28:22,510 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=47.7 pTM=0.312 ipTM=0.173 tol=17.4 2024-12-07 15:29:21,098 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=48.1 pTM=0.316 ipTM=0.198 tol=14.4 2024-12-07 15:30:19,689 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=48.4 pTM=0.313 ipTM=0.197 tol=16.8 2024-12-07 15:31:18,331 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=48.9 pTM=0.33 ipTM=0.284 tol=49.4 2024-12-07 15:32:16,994 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=49 pTM=0.335 ipTM=0.309 tol=19.1 2024-12-07 15:33:15,610 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=49.1 pTM=0.341 ipTM=0.338 tol=12.2 2024-12-07 15:34:14,190 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=49.2 pTM=0.345 ipTM=0.333 tol=12.6 2024-12-07 15:35:12,761 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=49.4 pTM=0.35 ipTM=0.346 tol=11.4 2024-12-07 15:36:11,330 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=49.2 pTM=0.35 ipTM=0.333 tol=7.8 2024-12-07 15:37:09,832 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=49.3 pTM=0.349 ipTM=0.349 tol=6.45 2024-12-07 15:38:08,320 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=49.2 pTM=0.347 ipTM=0.322 tol=5.08 2024-12-07 15:39:06,815 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=49.4 pTM=0.35 ipTM=0.347 tol=4.29 2024-12-07 15:40:05,377 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=49.3 pTM=0.348 ipTM=0.322 tol=4.72 2024-12-07 15:41:03,938 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=49.4 pTM=0.349 ipTM=0.343 tol=3.74 2024-12-07 15:42:02,497 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=49.2 pTM=0.347 ipTM=0.328 tol=3.16 2024-12-07 15:43:01,085 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=49.4 pTM=0.348 ipTM=0.341 tol=4.1 2024-12-07 15:43:59,662 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=49.4 pTM=0.348 ipTM=0.334 tol=3.61 2024-12-07 15:44:58,214 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=49.6 pTM=0.349 ipTM=0.354 tol=4.11 2024-12-07 15:45:56,826 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=49.4 pTM=0.346 ipTM=0.325 tol=5 2024-12-07 15:46:55,412 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=49.5 pTM=0.347 ipTM=0.347 tol=4.77 2024-12-07 15:47:54,050 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=49.5 pTM=0.346 ipTM=0.325 tol=5.18 2024-12-07 15:48:52,586 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=49.6 pTM=0.349 ipTM=0.349 tol=5.27 2024-12-07 15:49:51,097 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=49.5 pTM=0.347 ipTM=0.335 tol=7.35 2024-12-07 15:50:49,578 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=49.5 pTM=0.349 ipTM=0.349 tol=5.91 2024-12-07 15:51:48,111 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=49.5 pTM=0.348 ipTM=0.328 tol=4.18 2024-12-07 15:52:46,670 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=49.6 pTM=0.351 ipTM=0.349 tol=4.16 2024-12-07 15:53:45,260 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=49.5 pTM=0.347 ipTM=0.333 tol=4.05 2024-12-07 15:54:43,857 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=49.5 pTM=0.349 ipTM=0.344 tol=3.47 2024-12-07 15:55:42,469 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=49.6 pTM=0.346 ipTM=0.328 tol=3.86 2024-12-07 15:55:42,471 alphafold2_multimer_v3_model_3_seed_000 took 1815.6s (30 recycles) 2024-12-07 15:56:42,251 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=47.9 pTM=0.323 ipTM=0.181 2024-12-07 15:57:40,760 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=49.2 pTM=0.346 ipTM=0.379 tol=22.9 2024-12-07 15:58:39,289 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=48.6 pTM=0.343 ipTM=0.295 tol=13.1 2024-12-07 15:59:37,911 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=48.7 pTM=0.343 ipTM=0.367 tol=13.8 2024-12-07 16:00:36,550 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=48.5 pTM=0.34 ipTM=0.333 tol=12 2024-12-07 16:01:35,180 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=48.6 pTM=0.341 ipTM=0.35 tol=8.13 2024-12-07 16:02:33,840 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=48.7 pTM=0.337 ipTM=0.346 tol=7.76 2024-12-07 16:03:32,485 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=48.8 pTM=0.341 ipTM=0.347 tol=8.76 2024-12-07 16:04:31,115 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.7 pTM=0.339 ipTM=0.346 tol=9.91 2024-12-07 16:05:29,766 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=48.7 pTM=0.338 ipTM=0.344 tol=8.07 2024-12-07 16:06:28,439 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=48.8 pTM=0.341 ipTM=0.35 tol=6.47 2024-12-07 16:07:27,063 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48.7 pTM=0.341 ipTM=0.346 tol=6.93 2024-12-07 16:08:25,658 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48.8 pTM=0.338 ipTM=0.326 tol=6.45 2024-12-07 16:09:24,320 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48.7 pTM=0.338 ipTM=0.347 tol=6.94 2024-12-07 16:10:22,979 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=48.7 pTM=0.339 ipTM=0.34 tol=6.46 2024-12-07 16:11:21,630 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=48.8 pTM=0.34 ipTM=0.339 tol=5.34 2024-12-07 16:12:20,283 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=48.4 pTM=0.337 ipTM=0.336 tol=6.89 2024-12-07 16:13:18,945 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48.7 pTM=0.338 ipTM=0.34 tol=6.59 2024-12-07 16:14:17,579 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=48.7 pTM=0.339 ipTM=0.342 tol=5.9 2024-12-07 16:15:16,223 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=48.8 pTM=0.34 ipTM=0.342 tol=6.41 2024-12-07 16:16:14,874 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=48.7 pTM=0.339 ipTM=0.344 tol=5.05 2024-12-07 16:17:13,518 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=48.7 pTM=0.337 ipTM=0.336 tol=7.3 2024-12-07 16:18:12,190 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48.7 pTM=0.337 ipTM=0.336 tol=11.5 2024-12-07 16:19:10,816 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=48.7 pTM=0.338 ipTM=0.333 tol=10.3 2024-12-07 16:20:09,477 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=48.3 pTM=0.334 ipTM=0.327 tol=8.33 2024-12-07 16:21:08,136 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=48.7 pTM=0.338 ipTM=0.346 tol=10.3 2024-12-07 16:22:06,670 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=48.6 pTM=0.337 ipTM=0.332 tol=7.97 2024-12-07 16:23:05,267 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=48.7 pTM=0.339 ipTM=0.342 tol=10.5 2024-12-07 16:24:03,881 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=48.6 pTM=0.339 ipTM=0.334 tol=9.56 2024-12-07 16:25:02,442 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=48.6 pTM=0.338 ipTM=0.346 tol=9.48 2024-12-07 16:26:01,043 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=48.6 pTM=0.337 ipTM=0.335 tol=6.86 2024-12-07 16:26:01,044 alphafold2_multimer_v3_model_4_seed_000 took 1817.3s (30 recycles) 2024-12-07 16:27:00,834 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=48.7 pTM=0.35 ipTM=0.269 2024-12-07 16:27:59,296 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=49.4 pTM=0.37 ipTM=0.434 tol=17.4 2024-12-07 16:28:57,830 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=48.8 pTM=0.354 ipTM=0.326 tol=9.99 2024-12-07 16:29:56,438 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=49.2 pTM=0.357 ipTM=0.381 tol=11.5 2024-12-07 16:30:54,986 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=49.4 pTM=0.358 ipTM=0.367 tol=11.1 2024-12-07 16:31:53,497 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=49.4 pTM=0.362 ipTM=0.402 tol=9.16 2024-12-07 16:32:52,011 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=49.4 pTM=0.361 ipTM=0.366 tol=8.49 2024-12-07 16:33:50,514 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=49.7 pTM=0.365 ipTM=0.406 tol=8.82 2024-12-07 16:34:49,011 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=49.7 pTM=0.365 ipTM=0.378 tol=6.14 2024-12-07 16:35:47,531 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=49.7 pTM=0.366 ipTM=0.385 tol=8.37 2024-12-07 16:36:46,009 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=49.7 pTM=0.367 ipTM=0.382 tol=5.86 2024-12-07 16:37:44,511 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=49.8 pTM=0.365 ipTM=0.384 tol=9.49 2024-12-07 16:38:43,045 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=49.7 pTM=0.364 ipTM=0.368 tol=6.16 2024-12-07 16:39:41,662 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=49.8 pTM=0.362 ipTM=0.39 tol=12 2024-12-07 16:40:40,262 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=49.8 pTM=0.365 ipTM=0.365 tol=11.7 2024-12-07 16:41:38,827 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=49.8 pTM=0.364 ipTM=0.392 tol=8.08 2024-12-07 16:42:37,335 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=49.6 pTM=0.362 ipTM=0.363 tol=6.8 2024-12-07 16:43:35,826 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=49.9 pTM=0.365 ipTM=0.385 tol=5.75 2024-12-07 16:44:34,335 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=49.8 pTM=0.363 ipTM=0.371 tol=6.31 2024-12-07 16:45:32,923 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=50 pTM=0.365 ipTM=0.404 tol=7.28 2024-12-07 16:46:31,481 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=49.9 pTM=0.363 ipTM=0.37 tol=6.49 2024-12-07 16:47:30,021 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=50 pTM=0.366 ipTM=0.398 tol=5.68 2024-12-07 16:48:28,611 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=49.8 pTM=0.362 ipTM=0.359 tol=6.39 2024-12-07 16:49:27,168 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=50 pTM=0.366 ipTM=0.384 tol=5.21 2024-12-07 16:50:25,713 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=49.8 pTM=0.361 ipTM=0.358 tol=5.84 2024-12-07 16:51:24,280 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=50 pTM=0.364 ipTM=0.397 tol=4.66 2024-12-07 16:52:22,815 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=49.9 pTM=0.363 ipTM=0.357 tol=3.83 2024-12-07 16:53:21,356 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=49.9 pTM=0.365 ipTM=0.389 tol=9.03 2024-12-07 16:54:19,893 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=49.9 pTM=0.363 ipTM=0.361 tol=10.1 2024-12-07 16:55:18,413 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=49.9 pTM=0.366 ipTM=0.399 tol=8.74 2024-12-07 16:56:16,950 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=49.9 pTM=0.362 ipTM=0.361 tol=8.69 2024-12-07 16:56:16,951 alphafold2_multimer_v3_model_5_seed_000 took 1814.7s (30 recycles) 2024-12-07 16:56:18,201 reranking models by 'multimer' metric 2024-12-07 16:56:21,768 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-07 16:58:24,409 Relaxation took 126.2s 2024-12-07 16:58:24,409 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=49.9 pTM=0.362 ipTM=0.361 2024-12-07 17:00:11,115 Relaxation took 106.7s 2024-12-07 17:00:11,115 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=48.6 pTM=0.337 ipTM=0.335 2024-12-07 17:01:54,468 Relaxation took 103.4s 2024-12-07 17:01:54,469 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=49.6 pTM=0.346 ipTM=0.328 2024-12-07 17:06:32,834 Relaxation took 278.4s 2024-12-07 17:06:32,834 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=49.2 pTM=0.315 ipTM=0.319 2024-12-07 17:09:55,465 Relaxation took 202.6s 2024-12-07 17:09:55,465 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=50.1 pTM=0.334 ipTM=0.313 2024-12-07 17:09:58,540 Done