2024-12-07 14:29:26,869 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 14:29:27,187 Running on GPU
2024-12-07 14:29:27,925 Found 6 citations for tools or databases
2024-12-07 14:29:27,926 Query 1/1: PRPF19_SLMAP (length 1332)
2024-12-07 14:29:28,183 Sleeping for 5s. Reason: PENDING
2024-12-07 14:29:33,439 Sleeping for 6s. Reason: RUNNING
2024-12-07 14:29:39,694 Sleeping for 6s. Reason: RUNNING
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2024-12-07 14:29:51,201 Sleeping for 6s. Reason: RUNNING
2024-12-07 14:29:57,466 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:30:02,723 Sleeping for 9s. Reason: RUNNING
2024-12-07 14:30:11,979 Sleeping for 7s. Reason: RUNNING
2024-12-07 14:30:19,236 Sleeping for 8s. Reason: RUNNING
2024-12-07 14:30:27,496 Sleeping for 7s. Reason: RUNNING
2024-12-07 14:30:34,751 Sleeping for 8s. Reason: RUNNING
2024-12-07 14:30:43,007 Sleeping for 10s. Reason: RUNNING
2024-12-07 14:30:53,270 Sleeping for 10s. Reason: RUNNING
2024-12-07 14:31:03,530 Sleeping for 6s. Reason: RUNNING
2024-12-07 14:31:09,790 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:31:15,043 Sleeping for 7s. Reason: RUNNING
2024-12-07 14:31:22,317 Sleeping for 7s. Reason: RUNNING
2024-12-07 14:31:29,575 Sleeping for 7s. Reason: RUNNING
2024-12-07 14:31:36,828 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:31:42,094 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:31:47,351 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:31:52,609 Sleeping for 7s. Reason: RUNNING
2024-12-07 14:31:59,871 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:32:05,131 Sleeping for 9s. Reason: RUNNING
2024-12-07 14:32:16,781 Sleeping for 8s. Reason: PENDING
2024-12-07 14:32:25,040 Sleeping for 7s. Reason: RUNNING
2024-12-07 14:32:32,302 Sleeping for 7s. Reason: RUNNING
2024-12-07 14:32:39,556 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:32:44,811 Sleeping for 9s. Reason: RUNNING
2024-12-07 14:32:54,068 Sleeping for 7s. Reason: RUNNING
2024-12-07 14:33:01,331 Sleeping for 10s. Reason: RUNNING
2024-12-07 14:33:11,597 Sleeping for 10s. Reason: RUNNING
2024-12-07 14:33:21,859 Sleeping for 8s. Reason: RUNNING
2024-12-07 14:33:30,133 Sleeping for 6s. Reason: RUNNING
2024-12-07 14:33:36,391 Sleeping for 10s. Reason: RUNNING
2024-12-07 14:33:46,649 Sleeping for 10s. Reason: RUNNING
2024-12-07 14:34:01,742 Setting max_seq=508, max_extra_seq=2048
2024-12-07 14:36:56,287 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.6 pTM=0.353 ipTM=0.197
2024-12-07 14:37:43,255 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=63.1 pTM=0.354 ipTM=0.192 tol=37.7
2024-12-07 14:38:30,346 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.7 pTM=0.356 ipTM=0.168 tol=16.7
2024-12-07 14:39:17,473 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.3 pTM=0.357 ipTM=0.163 tol=13.4
2024-12-07 14:40:04,608 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=63.4 pTM=0.358 ipTM=0.162 tol=8.44
2024-12-07 14:40:51,757 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=63.4 pTM=0.357 ipTM=0.16 tol=7.65
2024-12-07 14:41:38,929 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=63.7 pTM=0.356 ipTM=0.159 tol=5.56
2024-12-07 14:42:26,157 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=63.2 pTM=0.356 ipTM=0.157 tol=8.69
2024-12-07 14:43:13,378 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=63.2 pTM=0.355 ipTM=0.169 tol=8.52
2024-12-07 14:44:00,549 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64 pTM=0.355 ipTM=0.226 tol=10.7
2024-12-07 14:44:47,749 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=63.5 pTM=0.353 ipTM=0.219 tol=8.96
2024-12-07 14:45:34,956 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63.2 pTM=0.355 ipTM=0.199 tol=10.5
2024-12-07 14:46:22,155 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=63.7 pTM=0.355 ipTM=0.186 tol=7.55
2024-12-07 14:47:09,352 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=63.5 pTM=0.354 ipTM=0.172 tol=6.13
2024-12-07 14:47:56,581 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=63.7 pTM=0.354 ipTM=0.175 tol=4.2
2024-12-07 14:48:43,811 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=63.4 pTM=0.354 ipTM=0.159 tol=5.17
2024-12-07 14:49:31,047 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=63.2 pTM=0.355 ipTM=0.158 tol=6.71
2024-12-07 14:50:18,285 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=63.6 pTM=0.354 ipTM=0.16 tol=5.25
2024-12-07 14:51:05,502 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=63.8 pTM=0.355 ipTM=0.158 tol=3.64
2024-12-07 14:51:52,763 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=63.8 pTM=0.355 ipTM=0.159 tol=2.9
2024-12-07 14:52:39,990 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=63.5 pTM=0.354 ipTM=0.158 tol=4.14
2024-12-07 14:53:27,200 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64 pTM=0.354 ipTM=0.166 tol=3.93
2024-12-07 14:54:14,350 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=63.5 pTM=0.354 ipTM=0.165 tol=4.96
2024-12-07 14:55:01,472 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=63.2 pTM=0.353 ipTM=0.161 tol=3.42
2024-12-07 14:55:48,593 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=63.2 pTM=0.353 ipTM=0.164 tol=3.19
2024-12-07 14:56:35,739 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=63.1 pTM=0.354 ipTM=0.161 tol=5.36
2024-12-07 14:57:22,905 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=63.6 pTM=0.353 ipTM=0.206 tol=10.7
2024-12-07 14:58:10,056 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=63.4 pTM=0.356 ipTM=0.188 tol=8.27
2024-12-07 14:58:57,188 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=63.4 pTM=0.355 ipTM=0.182 tol=4.81
2024-12-07 14:59:44,344 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63.8 pTM=0.356 ipTM=0.177 tol=3.95
2024-12-07 15:00:31,527 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=63.8 pTM=0.356 ipTM=0.176 tol=3.71
2024-12-07 15:00:31,528 alphafold2_multimer_v3_model_1_seed_000 took 1584.9s (30 recycles)
2024-12-07 15:01:19,841 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62 pTM=0.354 ipTM=0.149
2024-12-07 15:02:07,166 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=63.7 pTM=0.355 ipTM=0.159 tol=34.2
2024-12-07 15:02:54,454 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=64 pTM=0.356 ipTM=0.152 tol=24.8
2024-12-07 15:03:41,750 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=64.1 pTM=0.356 ipTM=0.149 tol=12.2
2024-12-07 15:04:29,124 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63.5 pTM=0.354 ipTM=0.153 tol=19.7
2024-12-07 15:05:16,452 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.6 pTM=0.355 ipTM=0.148 tol=16.9
2024-12-07 15:06:03,815 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.3 pTM=0.355 ipTM=0.152 tol=32
2024-12-07 15:06:51,159 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=65.7 pTM=0.357 ipTM=0.236 tol=27.2
2024-12-07 15:07:38,475 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66.4 pTM=0.356 ipTM=0.25 tol=11.4
2024-12-07 15:08:25,719 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=66.4 pTM=0.357 ipTM=0.251 tol=6.13
2024-12-07 15:09:12,933 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66.8 pTM=0.356 ipTM=0.252 tol=5.43
2024-12-07 15:10:00,173 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=66 pTM=0.357 ipTM=0.255 tol=15.9
2024-12-07 15:10:47,417 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.5 pTM=0.357 ipTM=0.254 tol=15.1
2024-12-07 15:11:34,675 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66.6 pTM=0.357 ipTM=0.253 tol=5.13
2024-12-07 15:12:21,930 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.9 pTM=0.357 ipTM=0.253 tol=11.4
2024-12-07 15:13:09,175 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.1 pTM=0.357 ipTM=0.253 tol=11
2024-12-07 15:13:56,417 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66.3 pTM=0.358 ipTM=0.255 tol=10.8
2024-12-07 15:14:43,703 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=66.8 pTM=0.358 ipTM=0.259 tol=5.11
2024-12-07 15:15:31,002 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=66.4 pTM=0.357 ipTM=0.259 tol=7.82
2024-12-07 15:16:18,265 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67 pTM=0.357 ipTM=0.258 tol=6.41
2024-12-07 15:17:05,550 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.1 pTM=0.357 ipTM=0.258 tol=20.8
2024-12-07 15:17:52,838 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.3 pTM=0.357 ipTM=0.256 tol=11.3
2024-12-07 15:18:40,122 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65.8 pTM=0.355 ipTM=0.255 tol=10.7
2024-12-07 15:19:27,413 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=66.9 pTM=0.357 ipTM=0.256 tol=16.9
2024-12-07 15:20:14,705 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=66.6 pTM=0.355 ipTM=0.253 tol=22.3
2024-12-07 15:21:01,990 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65.9 pTM=0.356 ipTM=0.253 tol=8.75
2024-12-07 15:21:49,313 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66.9 pTM=0.356 ipTM=0.255 tol=18.5
2024-12-07 15:22:36,607 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.8 pTM=0.357 ipTM=0.258 tol=16.8
2024-12-07 15:23:23,861 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=66.6 pTM=0.356 ipTM=0.256 tol=20.8
2024-12-07 15:24:11,145 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=66.3 pTM=0.356 ipTM=0.259 tol=23.9
2024-12-07 15:24:58,425 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=66.6 pTM=0.357 ipTM=0.256 tol=18.2
2024-12-07 15:24:58,426 alphafold2_multimer_v3_model_2_seed_000 took 1465.8s (30 recycles)
2024-12-07 15:25:46,897 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=60.8 pTM=0.352 ipTM=0.142
2024-12-07 15:26:34,203 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63.1 pTM=0.35 ipTM=0.169 tol=44.1
2024-12-07 15:27:21,449 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=62.8 pTM=0.352 ipTM=0.167 tol=11.8
2024-12-07 15:28:08,697 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=62.5 pTM=0.353 ipTM=0.168 tol=13.1
2024-12-07 15:28:55,900 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.2 pTM=0.358 ipTM=0.183 tol=17.2
2024-12-07 15:29:43,091 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63.5 pTM=0.363 ipTM=0.185 tol=12.4
2024-12-07 15:30:30,318 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61.6 pTM=0.36 ipTM=0.186 tol=7.89
2024-12-07 15:31:17,527 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=63.1 pTM=0.364 ipTM=0.186 tol=7.05
2024-12-07 15:32:04,781 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.6 pTM=0.361 ipTM=0.192 tol=9.07
2024-12-07 15:32:52,000 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=63.6 pTM=0.366 ipTM=0.192 tol=11.4
2024-12-07 15:33:39,232 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61.8 pTM=0.362 ipTM=0.194 tol=7.93
2024-12-07 15:34:26,459 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=63 pTM=0.367 ipTM=0.2 tol=8.73
2024-12-07 15:35:13,720 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.6 pTM=0.367 ipTM=0.21 tol=9.05
2024-12-07 15:36:00,986 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.9 pTM=0.367 ipTM=0.198 tol=10.7
2024-12-07 15:36:48,291 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.7 pTM=0.366 ipTM=0.225 tol=10.9
2024-12-07 15:37:35,563 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=63.3 pTM=0.368 ipTM=0.202 tol=13.9
2024-12-07 15:38:22,819 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.5 pTM=0.368 ipTM=0.228 tol=12.3
2024-12-07 15:39:10,061 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=63.5 pTM=0.369 ipTM=0.207 tol=12.1
2024-12-07 15:39:57,331 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.9 pTM=0.365 ipTM=0.217 tol=13.7
2024-12-07 15:40:44,589 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=64 pTM=0.367 ipTM=0.203 tol=17.4
2024-12-07 15:41:31,830 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=62 pTM=0.365 ipTM=0.222 tol=15.4
2024-12-07 15:42:19,092 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.8 pTM=0.366 ipTM=0.206 tol=13.6
2024-12-07 15:43:06,297 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.4 pTM=0.365 ipTM=0.223 tol=15.4
2024-12-07 15:43:53,530 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.9 pTM=0.369 ipTM=0.206 tol=16.4
2024-12-07 15:44:40,737 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.5 pTM=0.369 ipTM=0.245 tol=14.4
2024-12-07 15:45:28,064 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=64.2 pTM=0.367 ipTM=0.201 tol=20.9
2024-12-07 15:46:15,340 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61.4 pTM=0.363 ipTM=0.214 tol=19.4
2024-12-07 15:47:02,646 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.9 pTM=0.368 ipTM=0.203 tol=14.3
2024-12-07 15:47:49,854 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.7 pTM=0.369 ipTM=0.225 tol=16.3
2024-12-07 15:48:37,221 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=64.3 pTM=0.367 ipTM=0.205 tol=26.7
2024-12-07 15:49:24,412 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61.1 pTM=0.369 ipTM=0.226 tol=26.5
2024-12-07 15:49:24,413 alphafold2_multimer_v3_model_3_seed_000 took 1464.9s (30 recycles)
2024-12-07 15:50:12,993 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=60.9 pTM=0.343 ipTM=0.235
2024-12-07 15:51:00,434 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=61.3 pTM=0.345 ipTM=0.251 tol=36.2
2024-12-07 15:51:47,779 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60 pTM=0.348 ipTM=0.234 tol=16.2
2024-12-07 15:52:35,174 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=58.2 pTM=0.349 ipTM=0.204 tol=14.2
2024-12-07 15:53:22,581 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57.8 pTM=0.351 ipTM=0.161 tol=15.2
2024-12-07 15:54:10,049 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=60.1 pTM=0.349 ipTM=0.236 tol=20.2
2024-12-07 15:54:57,362 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.7 pTM=0.351 ipTM=0.206 tol=11.2
2024-12-07 15:55:44,707 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=58.9 pTM=0.351 ipTM=0.196 tol=8.48
2024-12-07 15:56:31,994 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59.2 pTM=0.353 ipTM=0.212 tol=6.86
2024-12-07 15:57:19,301 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=59.7 pTM=0.352 ipTM=0.192 tol=6.43
2024-12-07 15:58:06,553 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59.9 pTM=0.354 ipTM=0.206 tol=6.6
2024-12-07 15:58:53,846 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60 pTM=0.354 ipTM=0.219 tol=6.45
2024-12-07 15:59:41,126 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59.2 pTM=0.355 ipTM=0.207 tol=6.15
2024-12-07 16:00:28,446 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.2 pTM=0.353 ipTM=0.195 tol=6.7
2024-12-07 16:01:15,774 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=58.9 pTM=0.353 ipTM=0.208 tol=11.7
2024-12-07 16:02:03,133 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=58.4 pTM=0.353 ipTM=0.201 tol=12.7
2024-12-07 16:02:50,450 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59 pTM=0.357 ipTM=0.195 tol=10.9
2024-12-07 16:03:37,794 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=58.8 pTM=0.357 ipTM=0.181 tol=8.19
2024-12-07 16:04:25,110 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=59.4 pTM=0.359 ipTM=0.203 tol=8.2
2024-12-07 16:05:12,369 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=60 pTM=0.357 ipTM=0.228 tol=11.1
2024-12-07 16:05:59,571 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59.9 pTM=0.358 ipTM=0.22 tol=9.66
2024-12-07 16:06:46,787 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60.2 pTM=0.357 ipTM=0.214 tol=8.28
2024-12-07 16:07:34,022 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.6 pTM=0.358 ipTM=0.208 tol=8.06
2024-12-07 16:08:21,266 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=59.7 pTM=0.357 ipTM=0.2 tol=11.2
2024-12-07 16:09:08,563 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=59.2 pTM=0.357 ipTM=0.211 tol=7.31
2024-12-07 16:09:55,859 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=59.6 pTM=0.358 ipTM=0.206 tol=7.84
2024-12-07 16:10:43,199 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=59.5 pTM=0.357 ipTM=0.208 tol=7.61
2024-12-07 16:11:30,488 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=59.5 pTM=0.357 ipTM=0.205 tol=8.94
2024-12-07 16:12:17,810 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=58.8 pTM=0.356 ipTM=0.196 tol=9.52
2024-12-07 16:13:05,114 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=59.3 pTM=0.357 ipTM=0.189 tol=8.48
2024-12-07 16:13:52,354 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=59.9 pTM=0.358 ipTM=0.221 tol=7.69
2024-12-07 16:13:52,355 alphafold2_multimer_v3_model_4_seed_000 took 1466.9s (30 recycles)
2024-12-07 16:14:40,921 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63 pTM=0.347 ipTM=0.145
2024-12-07 16:15:28,490 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=63.1 pTM=0.349 ipTM=0.155 tol=25
2024-12-07 16:16:16,000 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=62.8 pTM=0.351 ipTM=0.149 tol=19.6
2024-12-07 16:17:03,495 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=63.2 pTM=0.349 ipTM=0.19 tol=30.7
2024-12-07 16:17:50,886 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=62.2 pTM=0.349 ipTM=0.189 tol=16.4
2024-12-07 16:18:38,391 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.3 pTM=0.349 ipTM=0.157 tol=13.1
2024-12-07 16:19:25,846 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.8 pTM=0.35 ipTM=0.149 tol=7.45
2024-12-07 16:20:13,298 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=60.9 pTM=0.351 ipTM=0.147 tol=10.4
2024-12-07 16:21:00,725 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61 pTM=0.351 ipTM=0.148 tol=7.39
2024-12-07 16:21:48,143 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=60.8 pTM=0.352 ipTM=0.15 tol=7.39
2024-12-07 16:22:35,601 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.2 pTM=0.353 ipTM=0.15 tol=6.39
2024-12-07 16:23:23,056 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61 pTM=0.352 ipTM=0.151 tol=6.45
2024-12-07 16:24:10,600 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=60.6 pTM=0.352 ipTM=0.149 tol=10.9
2024-12-07 16:24:58,029 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=60.9 pTM=0.352 ipTM=0.166 tol=7.3
2024-12-07 16:25:45,478 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=60.9 pTM=0.353 ipTM=0.172 tol=8.59
2024-12-07 16:26:32,909 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=60.9 pTM=0.352 ipTM=0.189 tol=7.58
2024-12-07 16:27:20,297 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=59.5 pTM=0.353 ipTM=0.167 tol=20.3
2024-12-07 16:28:07,652 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=60.9 pTM=0.353 ipTM=0.187 tol=11.5
2024-12-07 16:28:54,930 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.2 pTM=0.354 ipTM=0.184 tol=6.14
2024-12-07 16:29:42,223 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.6 pTM=0.353 ipTM=0.185 tol=5.96
2024-12-07 16:30:29,448 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61 pTM=0.354 ipTM=0.178 tol=18.8
2024-12-07 16:31:16,780 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.8 pTM=0.353 ipTM=0.199 tol=14.2
2024-12-07 16:32:04,060 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.8 pTM=0.354 ipTM=0.198 tol=9.84
2024-12-07 16:32:51,316 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=62 pTM=0.355 ipTM=0.194 tol=8.23
2024-12-07 16:33:38,627 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.4 pTM=0.355 ipTM=0.22 tol=9.84
2024-12-07 16:34:25,889 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62.8 pTM=0.355 ipTM=0.215 tol=7.77
2024-12-07 16:35:13,151 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=63.2 pTM=0.355 ipTM=0.216 tol=5.53
2024-12-07 16:36:00,398 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.8 pTM=0.355 ipTM=0.22 tol=6.2
2024-12-07 16:36:47,682 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.8 pTM=0.354 ipTM=0.205 tol=4.26
2024-12-07 16:37:35,001 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62.9 pTM=0.354 ipTM=0.201 tol=3.84
2024-12-07 16:38:22,276 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62.5 pTM=0.355 ipTM=0.208 tol=13.6
2024-12-07 16:38:22,278 alphafold2_multimer_v3_model_5_seed_000 took 1468.9s (30 recycles)
2024-12-07 16:38:23,346 reranking models by 'multimer' metric
2024-12-07 16:38:24,743 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 16:40:53,794 Relaxation took 150.4s
2024-12-07 16:40:53,794 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=66.6 pTM=0.357 ipTM=0.256
2024-12-07 16:43:58,634 Relaxation took 184.8s
2024-12-07 16:43:58,634 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61.1 pTM=0.369 ipTM=0.226
2024-12-07 16:47:03,087 Relaxation took 184.5s
2024-12-07 16:47:03,087 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=59.9 pTM=0.358 ipTM=0.221
2024-12-07 16:50:14,096 Relaxation took 191.0s
2024-12-07 16:50:14,096 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62.5 pTM=0.355 ipTM=0.208
2024-12-07 16:52:24,856 Relaxation took 130.8s
2024-12-07 16:52:24,856 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=63.8 pTM=0.356 ipTM=0.176
2024-12-07 16:52:27,639 Done