2024-12-07 14:51:17,731 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 14:51:18,052 Running on GPU
2024-12-07 14:51:20,417 Found 6 citations for tools or databases
2024-12-07 14:51:20,417 Query 1/1: RAB40C_RABGGTB (length 612)
2024-12-07 14:51:20,687 Sleeping for 5s. Reason: PENDING
2024-12-07 14:51:25,943 Sleeping for 6s. Reason: RUNNING
2024-12-07 14:51:32,193 Sleeping for 8s. Reason: RUNNING
2024-12-07 14:51:40,452 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:51:45,706 Sleeping for 7s. Reason: RUNNING
2024-12-07 14:51:52,962 Sleeping for 7s. Reason: RUNNING
2024-12-07 14:52:00,222 Sleeping for 10s. Reason: RUNNING
2024-12-07 14:52:10,508 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:52:15,777 Sleeping for 6s. Reason: RUNNING
2024-12-07 14:52:22,041 Sleeping for 9s. Reason: RUNNING
2024-12-07 14:52:31,293 Sleeping for 8s. Reason: RUNNING
2024-12-07 14:52:39,546 Sleeping for 7s. Reason: RUNNING
2024-12-07 14:52:46,800 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:52:52,050 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:52:57,303 Sleeping for 7s. Reason: RUNNING
2024-12-07 14:53:04,562 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:53:09,820 Sleeping for 10s. Reason: RUNNING
2024-12-07 14:53:20,076 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:53:25,337 Sleeping for 8s. Reason: RUNNING
2024-12-07 14:53:33,607 Sleeping for 6s. Reason: RUNNING
2024-12-07 14:53:39,866 Sleeping for 6s. Reason: RUNNING
2024-12-07 14:53:46,128 Sleeping for 10s. Reason: RUNNING
2024-12-07 14:53:56,396 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:54:01,646 Sleeping for 10s. Reason: RUNNING
2024-12-07 14:54:11,911 Sleeping for 8s. Reason: RUNNING
2024-12-07 14:54:20,169 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:54:25,430 Sleeping for 7s. Reason: RUNNING
2024-12-07 14:54:42,258 Sleeping for 10s. Reason: PENDING
2024-12-07 14:54:52,519 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:54:57,771 Sleeping for 10s. Reason: RUNNING
2024-12-07 14:55:08,034 Sleeping for 8s. Reason: RUNNING
2024-12-07 14:55:16,298 Sleeping for 9s. Reason: RUNNING
2024-12-07 14:55:25,560 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:55:30,819 Sleeping for 6s. Reason: RUNNING
2024-12-07 14:55:37,078 Sleeping for 10s. Reason: RUNNING
2024-12-07 14:55:47,340 Sleeping for 10s. Reason: RUNNING
2024-12-07 14:55:57,597 Sleeping for 9s. Reason: RUNNING
2024-12-07 14:56:06,861 Sleeping for 10s. Reason: RUNNING
2024-12-07 14:56:20,014 Setting max_seq=508, max_extra_seq=2048
2024-12-07 14:58:33,240 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=73.4 pTM=0.6 ipTM=0.199
2024-12-07 14:58:40,928 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=71.7 pTM=0.606 ipTM=0.212 tol=7.12
2024-12-07 14:58:48,605 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=70.8 pTM=0.603 ipTM=0.213 tol=4.43
2024-12-07 14:58:56,298 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=71.3 pTM=0.603 ipTM=0.21 tol=2.36
2024-12-07 14:59:04,017 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=70.6 pTM=0.602 ipTM=0.208 tol=3.75
2024-12-07 14:59:11,732 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=70.2 pTM=0.602 ipTM=0.205 tol=3.52
2024-12-07 14:59:19,450 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=70 pTM=0.604 ipTM=0.212 tol=3.22
2024-12-07 14:59:27,163 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=70.4 pTM=0.603 ipTM=0.208 tol=3.52
2024-12-07 14:59:34,889 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=70.9 pTM=0.604 ipTM=0.213 tol=2.29
2024-12-07 14:59:42,607 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=70.4 pTM=0.602 ipTM=0.207 tol=2.57
2024-12-07 14:59:50,329 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=70.2 pTM=0.603 ipTM=0.21 tol=4.09
2024-12-07 14:59:58,045 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=70.3 pTM=0.604 ipTM=0.208 tol=4.45
2024-12-07 15:00:05,770 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=70.4 pTM=0.601 ipTM=0.209 tol=3
2024-12-07 15:00:13,498 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=70.8 pTM=0.603 ipTM=0.208 tol=2.5
2024-12-07 15:00:21,222 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=70.8 pTM=0.604 ipTM=0.215 tol=2.17
2024-12-07 15:00:28,949 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=70.8 pTM=0.601 ipTM=0.206 tol=2.07
2024-12-07 15:00:36,674 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=70.7 pTM=0.602 ipTM=0.211 tol=1.92
2024-12-07 15:00:44,416 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=70.7 pTM=0.602 ipTM=0.206 tol=2.03
2024-12-07 15:00:52,168 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=70.4 pTM=0.602 ipTM=0.21 tol=3.34
2024-12-07 15:00:59,902 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=70.4 pTM=0.603 ipTM=0.206 tol=3.53
2024-12-07 15:01:07,636 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=70 pTM=0.601 ipTM=0.212 tol=3.07
2024-12-07 15:01:15,368 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=70.7 pTM=0.601 ipTM=0.206 tol=3
2024-12-07 15:01:23,108 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=71.4 pTM=0.603 ipTM=0.215 tol=1.81
2024-12-07 15:01:30,849 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=70.9 pTM=0.605 ipTM=0.213 tol=1.71
2024-12-07 15:01:38,586 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=70.2 pTM=0.602 ipTM=0.209 tol=2.46
2024-12-07 15:01:46,303 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=70.6 pTM=0.604 ipTM=0.213 tol=1.73
2024-12-07 15:01:54,044 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=70.4 pTM=0.602 ipTM=0.211 tol=2.01
2024-12-07 15:02:01,787 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=70.7 pTM=0.603 ipTM=0.212 tol=2.26
2024-12-07 15:02:09,533 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=70.7 pTM=0.604 ipTM=0.213 tol=1.93
2024-12-07 15:02:17,273 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=71.1 pTM=0.604 ipTM=0.214 tol=2.21
2024-12-07 15:02:24,995 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=70.4 pTM=0.601 ipTM=0.208 tol=2.84
2024-12-07 15:02:24,996 alphafold2_multimer_v3_model_1_seed_000 took 360.0s (30 recycles)
2024-12-07 15:02:33,003 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=75.4 pTM=0.608 ipTM=0.228
2024-12-07 15:02:40,809 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=73.9 pTM=0.603 ipTM=0.202 tol=3.99
2024-12-07 15:02:48,578 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=73.4 pTM=0.6 ipTM=0.197 tol=2.25
2024-12-07 15:02:56,382 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=74.1 pTM=0.603 ipTM=0.205 tol=1.57
2024-12-07 15:03:04,179 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=73.8 pTM=0.604 ipTM=0.199 tol=1.94
2024-12-07 15:03:11,978 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=73.9 pTM=0.606 ipTM=0.207 tol=3.45
2024-12-07 15:03:19,781 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=73.4 pTM=0.604 ipTM=0.202 tol=2.48
2024-12-07 15:03:27,572 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=74 pTM=0.613 ipTM=0.22 tol=4.08
2024-12-07 15:03:35,369 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=74 pTM=0.606 ipTM=0.207 tol=3.65
2024-12-07 15:03:43,162 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=73.4 pTM=0.605 ipTM=0.204 tol=3.31
2024-12-07 15:03:50,965 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=74.2 pTM=0.605 ipTM=0.204 tol=1.47
2024-12-07 15:03:58,756 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=73.9 pTM=0.608 ipTM=0.212 tol=1.56
2024-12-07 15:04:06,555 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=73.5 pTM=0.605 ipTM=0.204 tol=1.43
2024-12-07 15:04:14,342 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=74.1 pTM=0.609 ipTM=0.217 tol=2.08
2024-12-07 15:04:22,133 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=73.8 pTM=0.607 ipTM=0.209 tol=2.88
2024-12-07 15:04:29,913 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=73.8 pTM=0.603 ipTM=0.199 tol=2.2
2024-12-07 15:04:37,704 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=73.5 pTM=0.605 ipTM=0.203 tol=2.25
2024-12-07 15:04:45,497 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=73.9 pTM=0.606 ipTM=0.209 tol=1.21
2024-12-07 15:04:53,290 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=73.8 pTM=0.604 ipTM=0.202 tol=1.58
2024-12-07 15:05:01,092 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=73.6 pTM=0.605 ipTM=0.205 tol=0.867
2024-12-07 15:05:08,868 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=73.5 pTM=0.606 ipTM=0.209 tol=4.85
2024-12-07 15:05:16,653 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=73.9 pTM=0.606 ipTM=0.212 tol=3.44
2024-12-07 15:05:24,438 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=73.9 pTM=0.606 ipTM=0.207 tol=1.89
2024-12-07 15:05:32,238 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=74.4 pTM=0.609 ipTM=0.218 tol=2.72
2024-12-07 15:05:40,026 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=73.7 pTM=0.606 ipTM=0.208 tol=3.02
2024-12-07 15:05:47,822 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=73.6 pTM=0.606 ipTM=0.206 tol=3.45
2024-12-07 15:05:55,614 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=74 pTM=0.606 ipTM=0.209 tol=1.29
2024-12-07 15:06:03,407 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=73.8 pTM=0.607 ipTM=0.21 tol=0.942
2024-12-07 15:06:11,201 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=73.9 pTM=0.605 ipTM=0.206 tol=1.29
2024-12-07 15:06:18,971 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=74 pTM=0.608 ipTM=0.215 tol=1.3
2024-12-07 15:06:26,747 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=73.6 pTM=0.605 ipTM=0.208 tol=1.47
2024-12-07 15:06:26,748 alphafold2_multimer_v3_model_2_seed_000 took 241.5s (30 recycles)
2024-12-07 15:06:34,789 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=73.8 pTM=0.588 ipTM=0.177
2024-12-07 15:06:42,564 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=73.8 pTM=0.604 ipTM=0.209 tol=10.2
2024-12-07 15:06:50,334 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=74.7 pTM=0.595 ipTM=0.188 tol=2.78
2024-12-07 15:06:58,092 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=74.5 pTM=0.599 ipTM=0.198 tol=4.44
2024-12-07 15:07:05,856 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=74.8 pTM=0.596 ipTM=0.193 tol=1.77
2024-12-07 15:07:13,608 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=73.6 pTM=0.603 ipTM=0.206 tol=1.26
2024-12-07 15:07:21,385 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=74 pTM=0.597 ipTM=0.195 tol=2.04
2024-12-07 15:07:29,144 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=73.4 pTM=0.599 ipTM=0.199 tol=1.35
2024-12-07 15:07:36,933 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=74 pTM=0.6 ipTM=0.2 tol=1.11
2024-12-07 15:07:44,700 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=73.3 pTM=0.6 ipTM=0.2 tol=0.917
2024-12-07 15:07:52,475 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=73.7 pTM=0.6 ipTM=0.202 tol=1.29
2024-12-07 15:08:00,224 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=73.3 pTM=0.601 ipTM=0.202 tol=1.11
2024-12-07 15:08:07,991 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=73.7 pTM=0.598 ipTM=0.198 tol=1.23
2024-12-07 15:08:15,766 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=73.4 pTM=0.6 ipTM=0.199 tol=1.32
2024-12-07 15:08:23,536 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=73.8 pTM=0.6 ipTM=0.2 tol=0.62
2024-12-07 15:08:31,310 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=73.4 pTM=0.598 ipTM=0.198 tol=0.962
2024-12-07 15:08:39,074 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=73.4 pTM=0.601 ipTM=0.203 tol=0.756
2024-12-07 15:08:46,824 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=73.6 pTM=0.604 ipTM=0.209 tol=1.75
2024-12-07 15:08:54,595 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=73.4 pTM=0.599 ipTM=0.2 tol=3.06
2024-12-07 15:09:02,356 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=73.2 pTM=0.598 ipTM=0.2 tol=1.15
2024-12-07 15:09:10,124 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=73.5 pTM=0.601 ipTM=0.205 tol=1.73
2024-12-07 15:09:17,897 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=73.6 pTM=0.602 ipTM=0.205 tol=1.27
2024-12-07 15:09:25,664 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=73.5 pTM=0.599 ipTM=0.202 tol=2.42
2024-12-07 15:09:33,431 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=73.7 pTM=0.604 ipTM=0.208 tol=1.98
2024-12-07 15:09:41,188 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=73.4 pTM=0.598 ipTM=0.198 tol=2.77
2024-12-07 15:09:48,957 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=73.2 pTM=0.598 ipTM=0.196 tol=1.72
2024-12-07 15:09:56,720 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=73.6 pTM=0.601 ipTM=0.205 tol=1.16
2024-12-07 15:10:04,469 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=73.8 pTM=0.607 ipTM=0.216 tol=2.71
2024-12-07 15:10:12,243 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=73.7 pTM=0.601 ipTM=0.202 tol=2.23
2024-12-07 15:10:20,012 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=73.6 pTM=0.6 ipTM=0.201 tol=1.07
2024-12-07 15:10:27,761 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=73.3 pTM=0.6 ipTM=0.203 tol=2.07
2024-12-07 15:10:27,762 alphafold2_multimer_v3_model_3_seed_000 took 240.8s (30 recycles)
2024-12-07 15:10:35,786 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=71.7 pTM=0.61 ipTM=0.233
2024-12-07 15:10:43,581 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=71.1 pTM=0.617 ipTM=0.233 tol=9.99
2024-12-07 15:10:51,369 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=71.6 pTM=0.606 ipTM=0.211 tol=8.09
2024-12-07 15:10:59,155 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=71.6 pTM=0.601 ipTM=0.202 tol=3.59
2024-12-07 15:11:06,955 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70.8 pTM=0.608 ipTM=0.213 tol=6.24
2024-12-07 15:11:14,751 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.6 pTM=0.605 ipTM=0.208 tol=2.9
2024-12-07 15:11:22,539 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71.7 pTM=0.608 ipTM=0.217 tol=6.92
2024-12-07 15:11:30,325 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=71.3 pTM=0.606 ipTM=0.214 tol=4.82
2024-12-07 15:11:38,123 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.9 pTM=0.603 ipTM=0.204 tol=4.7
2024-12-07 15:11:45,920 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.9 pTM=0.607 ipTM=0.215 tol=2.43
2024-12-07 15:11:53,687 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=71.2 pTM=0.604 ipTM=0.208 tol=3.62
2024-12-07 15:12:01,479 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.4 pTM=0.605 ipTM=0.211 tol=4.86
2024-12-07 15:12:09,274 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.5 pTM=0.605 ipTM=0.212 tol=1.9
2024-12-07 15:12:17,053 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.7 pTM=0.606 ipTM=0.214 tol=3.43
2024-12-07 15:12:24,828 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=71.6 pTM=0.604 ipTM=0.208 tol=4.99
2024-12-07 15:12:32,621 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.7 pTM=0.604 ipTM=0.207 tol=6.1
2024-12-07 15:12:40,405 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.4 pTM=0.608 ipTM=0.218 tol=2.77
2024-12-07 15:12:48,191 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.2 pTM=0.602 ipTM=0.208 tol=4.7
2024-12-07 15:12:55,962 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=71.7 pTM=0.603 ipTM=0.205 tol=3.67
2024-12-07 15:13:03,741 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=71.1 pTM=0.605 ipTM=0.214 tol=1.82
2024-12-07 15:13:11,526 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.3 pTM=0.602 ipTM=0.206 tol=6.53
2024-12-07 15:13:19,309 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=71 pTM=0.607 ipTM=0.216 tol=4.73
2024-12-07 15:13:27,083 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=71.2 pTM=0.602 ipTM=0.206 tol=2.2
2024-12-07 15:13:34,889 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.2 pTM=0.607 ipTM=0.214 tol=6.52
2024-12-07 15:13:42,663 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=71.2 pTM=0.602 ipTM=0.207 tol=6.25
2024-12-07 15:13:50,445 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.9 pTM=0.606 ipTM=0.213 tol=3.11
2024-12-07 15:13:58,224 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=71.4 pTM=0.603 ipTM=0.209 tol=2.78
2024-12-07 15:14:06,023 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.1 pTM=0.606 ipTM=0.214 tol=6.49
2024-12-07 15:14:13,810 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=71.1 pTM=0.605 ipTM=0.212 tol=5.71
2024-12-07 15:14:21,584 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=71.4 pTM=0.604 ipTM=0.211 tol=2.64
2024-12-07 15:14:29,361 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=71.4 pTM=0.603 ipTM=0.208 tol=2.99
2024-12-07 15:14:29,361 alphafold2_multimer_v3_model_4_seed_000 took 241.4s (30 recycles)
2024-12-07 15:14:37,423 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=73.1 pTM=0.621 ipTM=0.25
2024-12-07 15:14:45,265 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.5 pTM=0.606 ipTM=0.208 tol=12
2024-12-07 15:14:53,086 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=72.9 pTM=0.595 ipTM=0.183 tol=6.76
2024-12-07 15:15:00,928 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=72.6 pTM=0.593 ipTM=0.181 tol=8.88
2024-12-07 15:15:08,763 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=72.1 pTM=0.597 ipTM=0.184 tol=4.86
2024-12-07 15:15:16,600 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=71.5 pTM=0.598 ipTM=0.191 tol=6.41
2024-12-07 15:15:24,431 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=71.9 pTM=0.596 ipTM=0.186 tol=3.89
2024-12-07 15:15:32,258 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=71.9 pTM=0.6 ipTM=0.192 tol=3.31
2024-12-07 15:15:40,093 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=71.8 pTM=0.601 ipTM=0.194 tol=2.73
2024-12-07 15:15:47,904 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=71.4 pTM=0.599 ipTM=0.193 tol=4.35
2024-12-07 15:15:55,736 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=71.3 pTM=0.6 ipTM=0.193 tol=6.19
2024-12-07 15:16:03,553 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=71.7 pTM=0.599 ipTM=0.194 tol=4.15
2024-12-07 15:16:11,373 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=71.6 pTM=0.599 ipTM=0.194 tol=2.21
2024-12-07 15:16:19,195 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=71.4 pTM=0.598 ipTM=0.191 tol=3.21
2024-12-07 15:16:27,039 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=71.4 pTM=0.598 ipTM=0.189 tol=2.4
2024-12-07 15:16:34,879 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=71.5 pTM=0.597 ipTM=0.187 tol=3.16
2024-12-07 15:16:42,695 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=71.4 pTM=0.599 ipTM=0.191 tol=3.4
2024-12-07 15:16:50,513 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=71.6 pTM=0.597 ipTM=0.187 tol=2.9
2024-12-07 15:16:58,344 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=71.3 pTM=0.597 ipTM=0.188 tol=2.54
2024-12-07 15:17:06,164 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=71.3 pTM=0.599 ipTM=0.193 tol=4.32
2024-12-07 15:17:13,986 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=71.3 pTM=0.597 ipTM=0.189 tol=3.3
2024-12-07 15:17:21,788 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=71.6 pTM=0.599 ipTM=0.193 tol=5.14
2024-12-07 15:17:29,601 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=71.7 pTM=0.597 ipTM=0.189 tol=2.83
2024-12-07 15:17:37,426 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=71.1 pTM=0.599 ipTM=0.194 tol=1.96
2024-12-07 15:17:45,227 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=71.3 pTM=0.598 ipTM=0.192 tol=1.95
2024-12-07 15:17:53,034 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=71.1 pTM=0.6 ipTM=0.196 tol=1.71
2024-12-07 15:18:00,853 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=71.5 pTM=0.598 ipTM=0.192 tol=5.02
2024-12-07 15:18:08,666 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=71 pTM=0.599 ipTM=0.195 tol=4.36
2024-12-07 15:18:16,486 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=71.5 pTM=0.598 ipTM=0.19 tol=4.76
2024-12-07 15:18:24,315 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=71.6 pTM=0.6 ipTM=0.194 tol=5.24
2024-12-07 15:18:32,145 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=71.5 pTM=0.597 ipTM=0.189 tol=2.56
2024-12-07 15:18:32,146 alphafold2_multimer_v3_model_5_seed_000 took 242.5s (30 recycles)
2024-12-07 15:18:32,394 reranking models by 'multimer' metric
2024-12-07 15:18:35,245 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 15:19:15,114 Relaxation took 42.7s
2024-12-07 15:19:15,115 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=71.4 pTM=0.603 ipTM=0.208
2024-12-07 15:19:46,587 Relaxation took 31.5s
2024-12-07 15:19:46,587 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=73.6 pTM=0.605 ipTM=0.208
2024-12-07 15:20:05,493 Relaxation took 18.9s
2024-12-07 15:20:05,493 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=70.4 pTM=0.601 ipTM=0.208
2024-12-07 15:20:40,613 Relaxation took 35.1s
2024-12-07 15:20:40,613 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=73.3 pTM=0.6 ipTM=0.203
2024-12-07 15:20:58,835 Relaxation took 18.2s
2024-12-07 15:20:58,835 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=71.5 pTM=0.597 ipTM=0.189
2024-12-07 15:20:59,996 Done