2024-12-07 14:52:40,889 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 14:52:41,192 Running on GPU
2024-12-07 14:52:42,950 Found 6 citations for tools or databases
2024-12-07 14:52:42,950 Query 1/1: RAB40C_TCEB2 (length 399)
2024-12-07 14:52:43,211 Sleeping for 10s. Reason: PENDING
2024-12-07 14:52:53,476 Sleeping for 6s. Reason: PENDING
2024-12-07 14:52:59,734 Sleeping for 6s. Reason: PENDING
2024-12-07 14:53:05,995 Sleeping for 7s. Reason: PENDING
2024-12-07 14:53:13,250 Sleeping for 6s. Reason: RUNNING
2024-12-07 14:53:19,504 Sleeping for 9s. Reason: RUNNING
2024-12-07 14:53:28,759 Sleeping for 10s. Reason: RUNNING
2024-12-07 14:53:39,032 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:53:44,286 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:53:49,541 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:53:54,809 Sleeping for 6s. Reason: RUNNING
2024-12-07 14:54:01,071 Sleeping for 8s. Reason: RUNNING
2024-12-07 14:54:09,334 Sleeping for 7s. Reason: RUNNING
2024-12-07 14:54:16,590 Sleeping for 6s. Reason: RUNNING
2024-12-07 14:54:22,845 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:54:28,097 Sleeping for 8s. Reason: RUNNING
2024-12-07 14:54:36,359 Sleeping for 6s. Reason: RUNNING
2024-12-07 14:54:42,614 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:54:47,865 Sleeping for 9s. Reason: RUNNING
2024-12-07 14:54:57,133 Sleeping for 9s. Reason: RUNNING
2024-12-07 14:55:06,392 Sleeping for 6s. Reason: RUNNING
2024-12-07 14:55:14,437 Sleeping for 9s. Reason: PENDING
2024-12-07 14:55:23,694 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:55:28,950 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:55:34,222 Sleeping for 7s. Reason: RUNNING
2024-12-07 14:55:41,487 Sleeping for 10s. Reason: RUNNING
2024-12-07 14:55:51,754 Sleeping for 7s. Reason: RUNNING
2024-12-07 14:55:59,021 Sleeping for 6s. Reason: RUNNING
2024-12-07 14:56:05,280 Sleeping for 9s. Reason: RUNNING
2024-12-07 14:56:14,545 Sleeping for 6s. Reason: RUNNING
2024-12-07 14:56:20,806 Sleeping for 6s. Reason: RUNNING
2024-12-07 14:56:27,065 Sleeping for 8s. Reason: RUNNING
2024-12-07 14:56:35,335 Sleeping for 10s. Reason: RUNNING
2024-12-07 14:56:45,603 Sleeping for 10s. Reason: RUNNING
2024-12-07 14:56:55,864 Sleeping for 9s. Reason: RUNNING
2024-12-07 14:57:07,958 Setting max_seq=508, max_extra_seq=2048
2024-12-07 14:59:49,796 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=56.5 pTM=0.459 ipTM=0.136
2024-12-07 14:59:53,644 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=55.9 pTM=0.451 ipTM=0.135 tol=8.58
2024-12-07 14:59:57,499 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=56.4 pTM=0.446 ipTM=0.128 tol=9.8
2024-12-07 15:00:01,351 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=55.8 pTM=0.447 ipTM=0.119 tol=9.65
2024-12-07 15:00:05,195 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=55.5 pTM=0.454 ipTM=0.152 tol=7.49
2024-12-07 15:00:09,052 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=56.6 pTM=0.446 ipTM=0.123 tol=6.16
2024-12-07 15:00:12,904 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=56.2 pTM=0.445 ipTM=0.125 tol=5.86
2024-12-07 15:00:16,772 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=57.2 pTM=0.455 ipTM=0.136 tol=11.6
2024-12-07 15:00:20,628 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=56.4 pTM=0.445 ipTM=0.121 tol=9.77
2024-12-07 15:00:24,489 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=57.5 pTM=0.454 ipTM=0.129 tol=7.12
2024-12-07 15:00:28,355 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=57.4 pTM=0.446 ipTM=0.123 tol=2.71
2024-12-07 15:00:32,207 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=56.5 pTM=0.451 ipTM=0.133 tol=4.01
2024-12-07 15:00:36,071 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=57.5 pTM=0.446 ipTM=0.125 tol=12.4
2024-12-07 15:00:39,935 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=58 pTM=0.452 ipTM=0.128 tol=8.04
2024-12-07 15:00:43,798 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=57.2 pTM=0.446 ipTM=0.121 tol=6.77
2024-12-07 15:00:47,665 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=57.7 pTM=0.451 ipTM=0.129 tol=6.39
2024-12-07 15:00:51,527 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=57.6 pTM=0.446 ipTM=0.126 tol=5.98
2024-12-07 15:00:55,392 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=58.4 pTM=0.452 ipTM=0.131 tol=5.77
2024-12-07 15:00:59,250 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=57.7 pTM=0.445 ipTM=0.126 tol=6.31
2024-12-07 15:01:03,111 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=58.1 pTM=0.447 ipTM=0.126 tol=5.12
2024-12-07 15:01:06,963 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56.8 pTM=0.447 ipTM=0.126 tol=3.31
2024-12-07 15:01:10,835 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=58.6 pTM=0.453 ipTM=0.13 tol=6.52
2024-12-07 15:01:14,697 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=57.3 pTM=0.446 ipTM=0.127 tol=6.48
2024-12-07 15:01:18,562 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=58.2 pTM=0.448 ipTM=0.123 tol=4.02
2024-12-07 15:01:22,422 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=57.4 pTM=0.448 ipTM=0.133 tol=3.94
2024-12-07 15:01:26,297 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=58.7 pTM=0.457 ipTM=0.14 tol=6.92
2024-12-07 15:01:30,158 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=57.2 pTM=0.444 ipTM=0.125 tol=6.77
2024-12-07 15:01:34,030 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=57.5 pTM=0.448 ipTM=0.124 tol=3.23
2024-12-07 15:01:37,899 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=58 pTM=0.45 ipTM=0.132 tol=3.16
2024-12-07 15:01:41,768 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=58.7 pTM=0.451 ipTM=0.126 tol=6.42
2024-12-07 15:01:45,634 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=57.6 pTM=0.442 ipTM=0.117 tol=5.42
2024-12-07 15:01:45,634 alphafold2_multimer_v3_model_1_seed_000 took 273.2s (30 recycles)
2024-12-07 15:01:49,621 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=66.8 pTM=0.643 ipTM=0.653
2024-12-07 15:01:53,492 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=64.8 pTM=0.593 ipTM=0.571 tol=3.69
2024-12-07 15:01:57,380 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=62.6 pTM=0.454 ipTM=0.124 tol=11.8
2024-12-07 15:02:01,248 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=60.9 pTM=0.455 ipTM=0.122 tol=10.4
2024-12-07 15:02:05,117 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=61 pTM=0.45 ipTM=0.115 tol=5.47
2024-12-07 15:02:08,980 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=60.8 pTM=0.453 ipTM=0.125 tol=4.7
2024-12-07 15:02:12,845 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=61.1 pTM=0.448 ipTM=0.118 tol=2.97
2024-12-07 15:02:16,710 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=59.9 pTM=0.448 ipTM=0.117 tol=4.41
2024-12-07 15:02:20,576 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=61 pTM=0.453 ipTM=0.131 tol=3.8
2024-12-07 15:02:24,449 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=60.8 pTM=0.445 ipTM=0.105 tol=7.44
2024-12-07 15:02:28,320 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=61.3 pTM=0.458 ipTM=0.146 tol=4.74
2024-12-07 15:02:32,198 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.7 pTM=0.465 ipTM=0.183 tol=7.68
2024-12-07 15:02:36,079 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.6 pTM=0.448 ipTM=0.118 tol=4.57
2024-12-07 15:02:39,953 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=61.2 pTM=0.453 ipTM=0.134 tol=4.98
2024-12-07 15:02:43,832 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=61.1 pTM=0.446 ipTM=0.114 tol=8.09
2024-12-07 15:02:47,700 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=60.6 pTM=0.448 ipTM=0.123 tol=9.98
2024-12-07 15:02:51,571 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=61.2 pTM=0.451 ipTM=0.128 tol=11.9
2024-12-07 15:02:55,443 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=60 pTM=0.444 ipTM=0.113 tol=13.2
2024-12-07 15:02:59,320 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61.2 pTM=0.457 ipTM=0.143 tol=13.1
2024-12-07 15:03:03,187 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=60.9 pTM=0.446 ipTM=0.118 tol=13
2024-12-07 15:03:07,059 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=61.3 pTM=0.457 ipTM=0.147 tol=5.93
2024-12-07 15:03:10,937 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=60.8 pTM=0.445 ipTM=0.115 tol=8.48
2024-12-07 15:03:14,802 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=60.3 pTM=0.452 ipTM=0.139 tol=9.45
2024-12-07 15:03:18,680 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=61.2 pTM=0.447 ipTM=0.113 tol=4.63
2024-12-07 15:03:22,546 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=60.5 pTM=0.455 ipTM=0.144 tol=6.39
2024-12-07 15:03:26,424 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=61.6 pTM=0.453 ipTM=0.131 tol=8.73
2024-12-07 15:03:30,300 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66.2 pTM=0.552 ipTM=0.478 tol=6.2
2024-12-07 15:03:34,177 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.8 pTM=0.45 ipTM=0.132 tol=3.75
2024-12-07 15:03:38,055 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=61.8 pTM=0.45 ipTM=0.124 tol=8.34
2024-12-07 15:03:41,930 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=61.4 pTM=0.451 ipTM=0.127 tol=3.33
2024-12-07 15:03:45,813 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=61.8 pTM=0.449 ipTM=0.131 tol=5.46
2024-12-07 15:03:45,813 alphafold2_multimer_v3_model_2_seed_000 took 120.1s (30 recycles)
2024-12-07 15:03:49,797 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=59.8 pTM=0.48 ipTM=0.248
2024-12-07 15:03:53,679 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.4 pTM=0.446 ipTM=0.13 tol=15.9
2024-12-07 15:03:57,558 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=61.4 pTM=0.46 ipTM=0.176 tol=3.95
2024-12-07 15:04:01,432 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=60.1 pTM=0.46 ipTM=0.174 tol=2.58
2024-12-07 15:04:05,300 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=60 pTM=0.458 ipTM=0.161 tol=1.42
2024-12-07 15:04:09,179 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=60.5 pTM=0.461 ipTM=0.163 tol=2.57
2024-12-07 15:04:13,060 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=60.9 pTM=0.455 ipTM=0.146 tol=2.67
2024-12-07 15:04:16,949 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=61.1 pTM=0.461 ipTM=0.16 tol=3.33
2024-12-07 15:04:20,828 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.8 pTM=0.458 ipTM=0.155 tol=3.21
2024-12-07 15:04:24,717 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=60.8 pTM=0.449 ipTM=0.124 tol=3.91
2024-12-07 15:04:28,598 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61.3 pTM=0.456 ipTM=0.144 tol=3.5
2024-12-07 15:04:32,488 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60.9 pTM=0.447 ipTM=0.125 tol=12.1
2024-12-07 15:04:36,368 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=60.4 pTM=0.457 ipTM=0.153 tol=11.1
2024-12-07 15:04:40,250 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61.3 pTM=0.46 ipTM=0.158 tol=2.85
2024-12-07 15:04:44,133 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61 pTM=0.453 ipTM=0.143 tol=3.25
2024-12-07 15:04:48,022 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.3 pTM=0.455 ipTM=0.142 tol=7.4
2024-12-07 15:04:51,907 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60.6 pTM=0.454 ipTM=0.141 tol=6.89
2024-12-07 15:04:55,789 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=60.6 pTM=0.453 ipTM=0.134 tol=8.29
2024-12-07 15:04:59,668 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=60.3 pTM=0.453 ipTM=0.14 tol=8.14
2024-12-07 15:05:03,551 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.1 pTM=0.461 ipTM=0.16 tol=3.24
2024-12-07 15:05:07,431 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61 pTM=0.454 ipTM=0.15 tol=3.33
2024-12-07 15:05:11,320 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60.9 pTM=0.448 ipTM=0.124 tol=10.6
2024-12-07 15:05:15,196 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60.2 pTM=0.452 ipTM=0.137 tol=8.89
2024-12-07 15:05:19,078 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.8 pTM=0.451 ipTM=0.133 tol=6.01
2024-12-07 15:05:22,957 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61 pTM=0.454 ipTM=0.144 tol=7.19
2024-12-07 15:05:26,845 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.1 pTM=0.453 ipTM=0.135 tol=3.39
2024-12-07 15:05:30,726 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61.3 pTM=0.456 ipTM=0.152 tol=3.27
2024-12-07 15:05:34,610 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.8 pTM=0.453 ipTM=0.139 tol=11.1
2024-12-07 15:05:38,487 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.8 pTM=0.458 ipTM=0.152 tol=10.7
2024-12-07 15:05:42,363 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.8 pTM=0.462 ipTM=0.171 tol=2.28
2024-12-07 15:05:46,234 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.7 pTM=0.45 ipTM=0.131 tol=3.01
2024-12-07 15:05:46,234 alphafold2_multimer_v3_model_3_seed_000 took 120.3s (30 recycles)
2024-12-07 15:05:50,211 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=56.9 pTM=0.445 ipTM=0.141
2024-12-07 15:05:54,082 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=62.2 pTM=0.49 ipTM=0.264 tol=14.4
2024-12-07 15:05:57,970 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=68.2 pTM=0.603 ipTM=0.659 tol=8.66
2024-12-07 15:06:01,866 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=68.8 pTM=0.596 ipTM=0.634 tol=3.45
2024-12-07 15:06:05,759 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=69.8 pTM=0.596 ipTM=0.62 tol=4.44
2024-12-07 15:06:09,645 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=69.2 pTM=0.587 ipTM=0.602 tol=1.69
2024-12-07 15:06:13,532 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=67.5 pTM=0.563 ipTM=0.527 tol=2.32
2024-12-07 15:06:17,418 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.9 pTM=0.488 ipTM=0.247 tol=2.05
2024-12-07 15:06:21,294 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=60.5 pTM=0.455 ipTM=0.124 tol=10.9
2024-12-07 15:06:25,163 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=58.9 pTM=0.454 ipTM=0.129 tol=7.71
2024-12-07 15:06:29,040 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59.2 pTM=0.455 ipTM=0.126 tol=2.71
2024-12-07 15:06:32,905 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=58.7 pTM=0.459 ipTM=0.148 tol=6.57
2024-12-07 15:06:36,775 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59.6 pTM=0.454 ipTM=0.134 tol=6.71
2024-12-07 15:06:40,646 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=60.8 pTM=0.451 ipTM=0.122 tol=10.2
2024-12-07 15:06:44,529 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.1 pTM=0.539 ipTM=0.451 tol=7.38
2024-12-07 15:06:48,413 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=62.7 pTM=0.453 ipTM=0.131 tol=4.23
2024-12-07 15:06:52,286 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.2 pTM=0.453 ipTM=0.128 tol=13.8
2024-12-07 15:06:56,156 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60 pTM=0.455 ipTM=0.132 tol=10.3
2024-12-07 15:07:00,035 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63.1 pTM=0.482 ipTM=0.245 tol=5.98
2024-12-07 15:07:03,906 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.8 pTM=0.457 ipTM=0.136 tol=15.2
2024-12-07 15:07:07,780 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=58.9 pTM=0.456 ipTM=0.137 tol=4.59
2024-12-07 15:07:11,644 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=59 pTM=0.456 ipTM=0.136 tol=2.86
2024-12-07 15:07:15,522 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.5 pTM=0.453 ipTM=0.128 tol=6.5
2024-12-07 15:07:19,391 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.4 pTM=0.521 ipTM=0.382 tol=7.41
2024-12-07 15:07:23,267 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=62.4 pTM=0.458 ipTM=0.156 tol=2.03
2024-12-07 15:07:27,131 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=58.9 pTM=0.453 ipTM=0.119 tol=9.84
2024-12-07 15:07:30,997 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=58.6 pTM=0.458 ipTM=0.143 tol=6.25
2024-12-07 15:07:34,876 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.4 pTM=0.571 ipTM=0.557 tol=14.4
2024-12-07 15:07:38,760 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=65.6 pTM=0.506 ipTM=0.336 tol=2.27
2024-12-07 15:07:42,627 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.8 pTM=0.455 ipTM=0.126 tol=6.7
2024-12-07 15:07:46,502 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.4 pTM=0.455 ipTM=0.124 tol=4.37
2024-12-07 15:07:46,502 alphafold2_multimer_v3_model_4_seed_000 took 120.1s (30 recycles)
2024-12-07 15:07:50,478 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=57.4 pTM=0.47 ipTM=0.202
2024-12-07 15:07:54,350 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.2 pTM=0.471 ipTM=0.226 tol=13.7
2024-12-07 15:07:58,232 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=57.6 pTM=0.446 ipTM=0.136 tol=7.55
2024-12-07 15:08:02,110 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=57 pTM=0.443 ipTM=0.134 tol=11.1
2024-12-07 15:08:05,986 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=56.4 pTM=0.442 ipTM=0.131 tol=5.68
2024-12-07 15:08:09,868 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=57.6 pTM=0.45 ipTM=0.133 tol=5.57
2024-12-07 15:08:13,751 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=58 pTM=0.446 ipTM=0.13 tol=5.51
2024-12-07 15:08:17,629 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=57.3 pTM=0.444 ipTM=0.125 tol=5.37
2024-12-07 15:08:21,505 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=57.5 pTM=0.445 ipTM=0.133 tol=8.31
2024-12-07 15:08:25,381 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=57.2 pTM=0.447 ipTM=0.134 tol=2.41
2024-12-07 15:08:29,261 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=57.9 pTM=0.442 ipTM=0.128 tol=4.38
2024-12-07 15:08:33,139 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=58.8 pTM=0.455 ipTM=0.137 tol=9.86
2024-12-07 15:08:37,015 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=58.3 pTM=0.449 ipTM=0.138 tol=13.1
2024-12-07 15:08:40,894 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=58.6 pTM=0.444 ipTM=0.129 tol=8.1
2024-12-07 15:08:44,782 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=58 pTM=0.45 ipTM=0.135 tol=6.47
2024-12-07 15:08:48,664 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=57.8 pTM=0.453 ipTM=0.145 tol=12.2
2024-12-07 15:08:52,546 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=58.3 pTM=0.449 ipTM=0.133 tol=7.49
2024-12-07 15:08:56,424 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=56.9 pTM=0.447 ipTM=0.132 tol=17.6
2024-12-07 15:09:00,296 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=57.8 pTM=0.448 ipTM=0.137 tol=13
2024-12-07 15:09:04,173 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=58.2 pTM=0.447 ipTM=0.129 tol=10.7
2024-12-07 15:09:08,068 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=59.2 pTM=0.45 ipTM=0.124 tol=10.1
2024-12-07 15:09:11,946 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=57.8 pTM=0.447 ipTM=0.123 tol=4.37
2024-12-07 15:09:15,816 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58 pTM=0.452 ipTM=0.141 tol=10.9
2024-12-07 15:09:19,689 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58.2 pTM=0.45 ipTM=0.131 tol=2.85
2024-12-07 15:09:23,568 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=57.9 pTM=0.449 ipTM=0.131 tol=4.38
2024-12-07 15:09:27,443 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=58 pTM=0.447 ipTM=0.13 tol=5
2024-12-07 15:09:31,325 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58.2 pTM=0.449 ipTM=0.132 tol=5.21
2024-12-07 15:09:35,210 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=60.4 pTM=0.473 ipTM=0.202 tol=11.3
2024-12-07 15:09:39,091 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=59.3 pTM=0.446 ipTM=0.119 tol=10.9
2024-12-07 15:09:42,966 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=58.2 pTM=0.446 ipTM=0.13 tol=5.81
2024-12-07 15:09:46,841 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=57.6 pTM=0.446 ipTM=0.132 tol=5.02
2024-12-07 15:09:46,841 alphafold2_multimer_v3_model_5_seed_000 took 120.2s (30 recycles)
2024-12-07 15:09:46,957 reranking models by 'multimer' metric
2024-12-07 15:09:48,776 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 15:10:10,762 Relaxation took 23.8s
2024-12-07 15:10:10,762 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.7 pTM=0.45 ipTM=0.131
2024-12-07 15:10:29,139 Relaxation took 18.4s
2024-12-07 15:10:29,139 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=57.6 pTM=0.446 ipTM=0.132
2024-12-07 15:10:49,373 Relaxation took 20.2s
2024-12-07 15:10:49,373 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=61.8 pTM=0.449 ipTM=0.131
2024-12-07 15:11:08,591 Relaxation took 19.2s
2024-12-07 15:11:08,591 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.4 pTM=0.455 ipTM=0.124
2024-12-07 15:11:29,351 Relaxation took 20.8s
2024-12-07 15:11:29,351 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=57.6 pTM=0.442 ipTM=0.117
2024-12-07 15:11:30,291 Done