2024-12-07 14:56:11,891 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 14:56:12,280 Running on GPU
2024-12-07 14:56:14,302 Found 6 citations for tools or databases
2024-12-07 14:56:14,302 Query 1/1: RABGEF1_C15orf59 (length 784)
2024-12-07 14:56:15,954 Sleeping for 9s. Reason: PENDING
2024-12-07 14:56:25,213 Sleeping for 9s. Reason: PENDING
2024-12-07 14:56:34,475 Sleeping for 7s. Reason: PENDING
2024-12-07 14:56:41,736 Sleeping for 9s. Reason: PENDING
2024-12-07 14:56:51,147 Sleeping for 7s. Reason: PENDING
2024-12-07 14:56:58,403 Sleeping for 5s. Reason: PENDING
2024-12-07 14:57:03,655 Sleeping for 7s. Reason: PENDING
2024-12-07 14:57:10,917 Sleeping for 9s. Reason: PENDING
2024-12-07 14:57:20,176 Sleeping for 9s. Reason: PENDING
2024-12-07 14:57:29,446 Sleeping for 9s. Reason: PENDING
2024-12-07 14:57:38,709 Sleeping for 8s. Reason: PENDING
2024-12-07 14:57:46,969 Sleeping for 9s. Reason: PENDING
2024-12-07 14:57:56,224 Sleeping for 8s. Reason: RUNNING
2024-12-07 14:58:04,496 Sleeping for 10s. Reason: RUNNING
2024-12-07 14:58:14,755 Sleeping for 8s. Reason: RUNNING
2024-12-07 14:58:23,015 Sleeping for 5s. Reason: RUNNING
2024-12-07 14:58:30,289 Setting max_seq=508, max_extra_seq=2048
2024-12-07 15:00:34,821 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=50.5 pTM=0.453 ipTM=0.156
2024-12-07 15:00:45,811 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=54.4 pTM=0.461 ipTM=0.219 tol=17
2024-12-07 15:00:56,796 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=52.9 pTM=0.467 ipTM=0.179 tol=15.1
2024-12-07 15:01:07,787 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=52.3 pTM=0.468 ipTM=0.166 tol=14.5
2024-12-07 15:01:18,795 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=53 pTM=0.463 ipTM=0.166 tol=10.9
2024-12-07 15:01:29,855 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=53.3 pTM=0.464 ipTM=0.179 tol=5.88
2024-12-07 15:01:40,869 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=52.8 pTM=0.464 ipTM=0.168 tol=5.38
2024-12-07 15:01:51,906 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=53 pTM=0.464 ipTM=0.168 tol=3.71
2024-12-07 15:02:02,961 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=54.3 pTM=0.464 ipTM=0.197 tol=8.03
2024-12-07 15:02:14,046 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=53.2 pTM=0.468 ipTM=0.175 tol=5.31
2024-12-07 15:02:25,094 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=53 pTM=0.462 ipTM=0.169 tol=6.12
2024-12-07 15:02:36,153 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=54.1 pTM=0.461 ipTM=0.193 tol=7.54
2024-12-07 15:02:47,213 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=52.8 pTM=0.462 ipTM=0.166 tol=4.41
2024-12-07 15:02:58,272 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=52.7 pTM=0.462 ipTM=0.164 tol=6.11
2024-12-07 15:03:09,346 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=52.3 pTM=0.464 ipTM=0.16 tol=3.52
2024-12-07 15:03:20,424 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=54.1 pTM=0.463 ipTM=0.206 tol=4.57
2024-12-07 15:03:31,503 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=52.6 pTM=0.461 ipTM=0.169 tol=3.07
2024-12-07 15:03:42,581 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=53 pTM=0.466 ipTM=0.174 tol=5.49
2024-12-07 15:03:53,667 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=54.1 pTM=0.461 ipTM=0.199 tol=5.18
2024-12-07 15:04:04,775 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=52.8 pTM=0.466 ipTM=0.174 tol=4
2024-12-07 15:04:15,848 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=53.3 pTM=0.463 ipTM=0.177 tol=5.02
2024-12-07 15:04:26,928 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=52.6 pTM=0.467 ipTM=0.17 tol=3.39
2024-12-07 15:04:38,006 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=52.6 pTM=0.47 ipTM=0.179 tol=2.47
2024-12-07 15:04:49,090 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=52.5 pTM=0.468 ipTM=0.192 tol=3.17
2024-12-07 15:05:00,171 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=52.6 pTM=0.471 ipTM=0.19 tol=2.25
2024-12-07 15:05:11,259 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=53.5 pTM=0.468 ipTM=0.196 tol=5.1
2024-12-07 15:05:22,340 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=52.6 pTM=0.467 ipTM=0.183 tol=4.6
2024-12-07 15:05:33,436 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=52.8 pTM=0.468 ipTM=0.187 tol=4.73
2024-12-07 15:05:44,500 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=53.2 pTM=0.467 ipTM=0.191 tol=3.64
2024-12-07 15:05:55,577 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=52.7 pTM=0.467 ipTM=0.185 tol=2.52
2024-12-07 15:06:06,656 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=52.8 pTM=0.469 ipTM=0.177 tol=5.34
2024-12-07 15:06:06,656 alphafold2_multimer_v3_model_1_seed_000 took 451.4s (30 recycles)
2024-12-07 15:06:18,182 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=51.5 pTM=0.457 ipTM=0.162
2024-12-07 15:06:29,344 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55.7 pTM=0.466 ipTM=0.231 tol=13
2024-12-07 15:06:40,489 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=56.2 pTM=0.47 ipTM=0.233 tol=10.8
2024-12-07 15:06:51,624 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=56.4 pTM=0.475 ipTM=0.236 tol=3.54
2024-12-07 15:07:02,794 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=56.4 pTM=0.472 ipTM=0.238 tol=3.05
2024-12-07 15:07:13,931 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=56.5 pTM=0.474 ipTM=0.238 tol=2.28
2024-12-07 15:07:25,068 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=56.5 pTM=0.473 ipTM=0.24 tol=1.68
2024-12-07 15:07:36,203 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=56.3 pTM=0.472 ipTM=0.237 tol=2
2024-12-07 15:07:47,337 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=56.5 pTM=0.472 ipTM=0.24 tol=1.16
2024-12-07 15:07:58,478 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=56.7 pTM=0.475 ipTM=0.241 tol=1
2024-12-07 15:08:09,598 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=56.2 pTM=0.47 ipTM=0.238 tol=1.22
2024-12-07 15:08:20,727 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=56.5 pTM=0.472 ipTM=0.241 tol=1.52
2024-12-07 15:08:31,861 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=56.7 pTM=0.472 ipTM=0.243 tol=2.79
2024-12-07 15:08:42,999 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=56.6 pTM=0.472 ipTM=0.242 tol=3.15
2024-12-07 15:08:54,133 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=56.5 pTM=0.471 ipTM=0.241 tol=1.41
2024-12-07 15:09:05,246 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=56.7 pTM=0.472 ipTM=0.24 tol=1.2
2024-12-07 15:09:16,366 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=56.6 pTM=0.472 ipTM=0.24 tol=0.939
2024-12-07 15:09:27,484 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=56.7 pTM=0.474 ipTM=0.239 tol=0.819
2024-12-07 15:09:38,620 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=56.6 pTM=0.472 ipTM=0.242 tol=1.47
2024-12-07 15:09:49,757 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=56.8 pTM=0.474 ipTM=0.243 tol=1.16
2024-12-07 15:10:00,892 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=56.6 pTM=0.471 ipTM=0.244 tol=1.14
2024-12-07 15:10:12,010 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=56.8 pTM=0.476 ipTM=0.243 tol=1.4
2024-12-07 15:10:23,146 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=56.7 pTM=0.475 ipTM=0.241 tol=1.27
2024-12-07 15:10:34,279 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=56.6 pTM=0.474 ipTM=0.243 tol=1.56
2024-12-07 15:10:45,420 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=56.7 pTM=0.474 ipTM=0.244 tol=1.14
2024-12-07 15:10:56,550 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=56.5 pTM=0.472 ipTM=0.242 tol=1.39
2024-12-07 15:11:07,674 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=56.5 pTM=0.473 ipTM=0.241 tol=1.42
2024-12-07 15:11:18,804 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=56.7 pTM=0.473 ipTM=0.242 tol=1.84
2024-12-07 15:11:29,917 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=56.6 pTM=0.474 ipTM=0.242 tol=1.81
2024-12-07 15:11:41,038 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=56.8 pTM=0.475 ipTM=0.243 tol=2.24
2024-12-07 15:11:52,175 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=56.8 pTM=0.473 ipTM=0.243 tol=2.16
2024-12-07 15:11:52,176 alphafold2_multimer_v3_model_2_seed_000 took 345.1s (30 recycles)
2024-12-07 15:12:03,685 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=49.5 pTM=0.465 ipTM=0.168
2024-12-07 15:12:14,858 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=52.5 pTM=0.463 ipTM=0.217 tol=15.9
2024-12-07 15:12:26,031 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=51.6 pTM=0.461 ipTM=0.159 tol=9.76
2024-12-07 15:12:37,195 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=52.6 pTM=0.464 ipTM=0.177 tol=11.5
2024-12-07 15:12:48,341 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=52.4 pTM=0.467 ipTM=0.169 tol=4.76
2024-12-07 15:12:59,495 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=52.8 pTM=0.473 ipTM=0.195 tol=3.51
2024-12-07 15:13:10,621 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=53.8 pTM=0.478 ipTM=0.203 tol=3.69
2024-12-07 15:13:21,754 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=53.3 pTM=0.479 ipTM=0.213 tol=2.95
2024-12-07 15:13:32,898 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=53.9 pTM=0.486 ipTM=0.235 tol=2.81
2024-12-07 15:13:44,038 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=54.6 pTM=0.485 ipTM=0.223 tol=2.68
2024-12-07 15:13:55,154 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=53.6 pTM=0.481 ipTM=0.215 tol=2.36
2024-12-07 15:14:06,280 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=54.1 pTM=0.484 ipTM=0.218 tol=2.53
2024-12-07 15:14:17,405 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=53.9 pTM=0.482 ipTM=0.216 tol=3.06
2024-12-07 15:14:28,534 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53.9 pTM=0.485 ipTM=0.234 tol=3.16
2024-12-07 15:14:39,654 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=53.8 pTM=0.484 ipTM=0.224 tol=2.23
2024-12-07 15:14:50,779 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53.8 pTM=0.483 ipTM=0.221 tol=2.57
2024-12-07 15:15:01,916 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53.6 pTM=0.482 ipTM=0.209 tol=1.84
2024-12-07 15:15:13,051 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53.5 pTM=0.482 ipTM=0.224 tol=1.36
2024-12-07 15:15:24,172 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=54.2 pTM=0.483 ipTM=0.215 tol=2.48
2024-12-07 15:15:35,308 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.9 pTM=0.482 ipTM=0.222 tol=2.09
2024-12-07 15:15:46,445 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53.8 pTM=0.482 ipTM=0.222 tol=1.72
2024-12-07 15:15:57,558 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=53.5 pTM=0.482 ipTM=0.226 tol=1.34
2024-12-07 15:16:08,699 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54.5 pTM=0.485 ipTM=0.234 tol=2.41
2024-12-07 15:16:19,833 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=54.2 pTM=0.479 ipTM=0.217 tol=2.01
2024-12-07 15:16:30,954 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=53.8 pTM=0.484 ipTM=0.232 tol=2.16
2024-12-07 15:16:42,090 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54 pTM=0.481 ipTM=0.224 tol=2.6
2024-12-07 15:16:53,221 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=53.5 pTM=0.481 ipTM=0.23 tol=3.47
2024-12-07 15:17:04,350 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=53.9 pTM=0.481 ipTM=0.229 tol=3.04
2024-12-07 15:17:15,480 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=53.7 pTM=0.482 ipTM=0.231 tol=1.37
2024-12-07 15:17:26,621 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53.6 pTM=0.481 ipTM=0.227 tol=1.88
2024-12-07 15:17:37,749 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54 pTM=0.484 ipTM=0.248 tol=1.52
2024-12-07 15:17:37,750 alphafold2_multimer_v3_model_3_seed_000 took 345.2s (30 recycles)
2024-12-07 15:17:49,305 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=49.1 pTM=0.448 ipTM=0.152
2024-12-07 15:18:00,479 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=51.2 pTM=0.461 ipTM=0.159 tol=9.52
2024-12-07 15:18:11,619 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=52 pTM=0.47 ipTM=0.174 tol=14
2024-12-07 15:18:22,782 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=52.6 pTM=0.475 ipTM=0.178 tol=4.16
2024-12-07 15:18:33,933 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=52.5 pTM=0.472 ipTM=0.176 tol=3.15
2024-12-07 15:18:45,102 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=52.9 pTM=0.474 ipTM=0.177 tol=3.56
2024-12-07 15:18:56,252 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52.6 pTM=0.473 ipTM=0.173 tol=2.41
2024-12-07 15:19:07,409 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.7 pTM=0.47 ipTM=0.175 tol=7.08
2024-12-07 15:19:18,561 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=52.6 pTM=0.473 ipTM=0.171 tol=4.7
2024-12-07 15:19:29,688 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=53.7 pTM=0.48 ipTM=0.207 tol=4.58
2024-12-07 15:19:40,814 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=53 pTM=0.48 ipTM=0.308 tol=2.62
2024-12-07 15:19:51,951 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=53.4 pTM=0.486 ipTM=0.325 tol=2.85
2024-12-07 15:20:03,089 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=53.5 pTM=0.484 ipTM=0.315 tol=3.74
2024-12-07 15:20:14,227 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=53.8 pTM=0.485 ipTM=0.321 tol=2.62
2024-12-07 15:20:25,361 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=53.4 pTM=0.487 ipTM=0.309 tol=2.3
2024-12-07 15:20:36,498 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=53.4 pTM=0.486 ipTM=0.312 tol=2.8
2024-12-07 15:20:47,631 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=54.8 pTM=0.486 ipTM=0.312 tol=5.42
2024-12-07 15:20:58,752 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=53.3 pTM=0.484 ipTM=0.311 tol=2.66
2024-12-07 15:21:09,891 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=53.1 pTM=0.485 ipTM=0.308 tol=4.19
2024-12-07 15:21:21,023 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=54 pTM=0.487 ipTM=0.32 tol=3.25
2024-12-07 15:21:32,150 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=53.2 pTM=0.484 ipTM=0.306 tol=2.45
2024-12-07 15:21:43,274 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=53.6 pTM=0.487 ipTM=0.319 tol=2.77
2024-12-07 15:21:54,415 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=53.1 pTM=0.483 ipTM=0.298 tol=3.74
2024-12-07 15:22:05,539 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=53.6 pTM=0.484 ipTM=0.316 tol=3.6
2024-12-07 15:22:16,662 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=53.6 pTM=0.487 ipTM=0.318 tol=2.4
2024-12-07 15:22:27,805 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=53.1 pTM=0.484 ipTM=0.314 tol=2.35
2024-12-07 15:22:38,944 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=53.7 pTM=0.484 ipTM=0.319 tol=2.65
2024-12-07 15:22:50,081 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=53.6 pTM=0.486 ipTM=0.32 tol=5.56
2024-12-07 15:23:01,205 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=54.5 pTM=0.485 ipTM=0.307 tol=5.13
2024-12-07 15:23:12,331 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=53.3 pTM=0.484 ipTM=0.313 tol=3.58
2024-12-07 15:23:23,460 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=52.8 pTM=0.483 ipTM=0.298 tol=2.79
2024-12-07 15:23:23,461 alphafold2_multimer_v3_model_4_seed_000 took 345.3s (30 recycles)
2024-12-07 15:23:35,024 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=49.7 pTM=0.449 ipTM=0.176
2024-12-07 15:23:46,218 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=51.9 pTM=0.457 ipTM=0.145 tol=10
2024-12-07 15:23:57,402 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=52.5 pTM=0.457 ipTM=0.163 tol=5.82
2024-12-07 15:24:08,574 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=53 pTM=0.459 ipTM=0.169 tol=4.88
2024-12-07 15:24:19,744 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=53.8 pTM=0.461 ipTM=0.183 tol=8.34
2024-12-07 15:24:30,927 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=53.9 pTM=0.46 ipTM=0.181 tol=4.82
2024-12-07 15:24:42,104 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=53.7 pTM=0.462 ipTM=0.178 tol=3.82
2024-12-07 15:24:53,277 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=53.8 pTM=0.464 ipTM=0.179 tol=2.91
2024-12-07 15:25:04,456 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53.8 pTM=0.464 ipTM=0.176 tol=1.51
2024-12-07 15:25:15,635 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=54.1 pTM=0.465 ipTM=0.18 tol=1.28
2024-12-07 15:25:26,801 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53.8 pTM=0.462 ipTM=0.176 tol=1.58
2024-12-07 15:25:37,965 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=54.1 pTM=0.463 ipTM=0.187 tol=1.36
2024-12-07 15:25:49,141 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=54.4 pTM=0.464 ipTM=0.189 tol=1.46
2024-12-07 15:26:00,321 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=54 pTM=0.465 ipTM=0.18 tol=2.76
2024-12-07 15:26:11,493 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.8 pTM=0.465 ipTM=0.183 tol=4.55
2024-12-07 15:26:22,668 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=54.2 pTM=0.463 ipTM=0.184 tol=5.61
2024-12-07 15:26:33,848 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53.8 pTM=0.465 ipTM=0.178 tol=2.08
2024-12-07 15:26:45,016 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=53.7 pTM=0.463 ipTM=0.179 tol=4.54
2024-12-07 15:26:56,194 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=54 pTM=0.463 ipTM=0.18 tol=5.74
2024-12-07 15:27:07,369 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.6 pTM=0.461 ipTM=0.177 tol=2.42
2024-12-07 15:27:18,550 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.9 pTM=0.462 ipTM=0.18 tol=3.65
2024-12-07 15:27:29,705 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=54 pTM=0.465 ipTM=0.181 tol=3.02
2024-12-07 15:27:40,884 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=53.8 pTM=0.464 ipTM=0.177 tol=5
2024-12-07 15:27:52,057 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.9 pTM=0.465 ipTM=0.181 tol=5
2024-12-07 15:28:03,236 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=54.2 pTM=0.467 ipTM=0.182 tol=2.71
2024-12-07 15:28:14,415 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53.9 pTM=0.466 ipTM=0.18 tol=4.98
2024-12-07 15:28:25,591 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=54 pTM=0.467 ipTM=0.182 tol=4.3
2024-12-07 15:28:36,767 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=54.3 pTM=0.471 ipTM=0.219 tol=5.7
2024-12-07 15:28:47,946 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=54.1 pTM=0.47 ipTM=0.199 tol=4.22
2024-12-07 15:28:59,114 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=54 pTM=0.469 ipTM=0.185 tol=4.95
2024-12-07 15:29:10,266 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=54.2 pTM=0.471 ipTM=0.218 tol=3.7
2024-12-07 15:29:10,267 alphafold2_multimer_v3_model_5_seed_000 took 346.4s (30 recycles)
2024-12-07 15:29:10,659 reranking models by 'multimer' metric
2024-12-07 15:29:13,704 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 15:30:06,725 Relaxation took 56.1s
2024-12-07 15:30:06,725 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=52.8 pTM=0.483 ipTM=0.298
2024-12-07 15:31:10,837 Relaxation took 64.1s
2024-12-07 15:31:10,837 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54 pTM=0.484 ipTM=0.248
2024-12-07 15:31:52,721 Relaxation took 41.9s
2024-12-07 15:31:52,721 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=56.8 pTM=0.473 ipTM=0.243
2024-12-07 15:32:34,545 Relaxation took 41.8s
2024-12-07 15:32:34,545 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=54.2 pTM=0.471 ipTM=0.218
2024-12-07 15:33:25,253 Relaxation took 50.7s
2024-12-07 15:33:25,254 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=52.8 pTM=0.469 ipTM=0.177
2024-12-07 15:33:26,669 Done