2024-12-07 15:08:54,828 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 15:08:55,139 Running on GPU
2024-12-07 15:08:57,285 Found 6 citations for tools or databases
2024-12-07 15:08:57,285 Query 1/1: RABGEF1_CYHR1 (length 895)
2024-12-07 15:08:57,613 Sleeping for 7s. Reason: PENDING
2024-12-07 15:09:04,872 Sleeping for 7s. Reason: RUNNING
2024-12-07 15:09:12,129 Sleeping for 10s. Reason: RUNNING
2024-12-07 15:09:22,385 Sleeping for 8s. Reason: RUNNING
2024-12-07 15:09:30,648 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:09:36,901 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:09:43,156 Sleeping for 7s. Reason: RUNNING
2024-12-07 15:09:50,415 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:09:56,830 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:10:07,241 Sleeping for 5s. Reason: PENDING
2024-12-07 15:10:12,503 Sleeping for 5s. Reason: RUNNING
2024-12-07 15:10:17,755 Sleeping for 7s. Reason: RUNNING
2024-12-07 15:10:25,011 Sleeping for 5s. Reason: RUNNING
2024-12-07 15:10:30,268 Sleeping for 5s. Reason: RUNNING
2024-12-07 15:10:35,528 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:10:44,800 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:10:54,059 Sleeping for 8s. Reason: RUNNING
2024-12-07 15:11:04,785 Setting max_seq=508, max_extra_seq=2048
2024-12-07 15:13:56,373 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.2 pTM=0.496 ipTM=0.328
2024-12-07 15:14:12,488 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.5 pTM=0.418 ipTM=0.189 tol=15.2
2024-12-07 15:14:28,662 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=65.4 pTM=0.411 ipTM=0.148 tol=5.2
2024-12-07 15:14:44,885 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=65.7 pTM=0.409 ipTM=0.147 tol=3.79
2024-12-07 15:15:01,126 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66.1 pTM=0.406 ipTM=0.149 tol=2.2
2024-12-07 15:15:17,414 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.6 pTM=0.402 ipTM=0.14 tol=2.8
2024-12-07 15:15:33,697 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.8 pTM=0.403 ipTM=0.144 tol=3.44
2024-12-07 15:15:50,018 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.5 pTM=0.397 ipTM=0.14 tol=3.81
2024-12-07 15:16:06,346 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.5 pTM=0.396 ipTM=0.142 tol=2.9
2024-12-07 15:16:22,683 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.3 pTM=0.393 ipTM=0.156 tol=4.41
2024-12-07 15:16:39,024 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.7 pTM=0.397 ipTM=0.135 tol=4.12
2024-12-07 15:16:55,372 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.1 pTM=0.399 ipTM=0.141 tol=6.79
2024-12-07 15:17:11,715 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.2 pTM=0.397 ipTM=0.139 tol=3.42
2024-12-07 15:17:28,051 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66 pTM=0.402 ipTM=0.149 tol=4.33
2024-12-07 15:17:44,388 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.2 pTM=0.401 ipTM=0.164 tol=4.98
2024-12-07 15:18:00,725 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.4 pTM=0.402 ipTM=0.174 tol=4.22
2024-12-07 15:18:17,069 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.3 pTM=0.401 ipTM=0.183 tol=1.44
2024-12-07 15:18:33,412 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.4 pTM=0.403 ipTM=0.17 tol=2.44
2024-12-07 15:18:49,747 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.6 pTM=0.402 ipTM=0.182 tol=3.04
2024-12-07 15:19:06,081 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.5 pTM=0.406 ipTM=0.2 tol=1.74
2024-12-07 15:19:22,409 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.5 pTM=0.405 ipTM=0.205 tol=1.17
2024-12-07 15:19:38,750 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.9 pTM=0.4 ipTM=0.196 tol=6.15
2024-12-07 15:19:55,100 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.5 pTM=0.399 ipTM=0.195 tol=3.1
2024-12-07 15:20:11,455 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=65.9 pTM=0.403 ipTM=0.17 tol=5.92
2024-12-07 15:20:27,799 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.1 pTM=0.398 ipTM=0.171 tol=4.3
2024-12-07 15:20:44,158 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=67.2 pTM=0.396 ipTM=0.205 tol=6.38
2024-12-07 15:21:00,519 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.1 pTM=0.397 ipTM=0.196 tol=3.18
2024-12-07 15:21:16,876 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=65.7 pTM=0.399 ipTM=0.174 tol=5.96
2024-12-07 15:21:33,252 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.1 pTM=0.395 ipTM=0.155 tol=5.09
2024-12-07 15:21:49,627 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=65.7 pTM=0.391 ipTM=0.16 tol=2.17
2024-12-07 15:22:05,990 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=65.7 pTM=0.391 ipTM=0.162 tol=2.89
2024-12-07 15:22:05,991 alphafold2_multimer_v3_model_1_seed_000 took 656.8s (30 recycles)
2024-12-07 15:22:22,834 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=66 pTM=0.429 ipTM=0.154
2024-12-07 15:22:39,220 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=67.9 pTM=0.426 ipTM=0.146 tol=10.4
2024-12-07 15:22:55,628 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68 pTM=0.419 ipTM=0.138 tol=5.11
2024-12-07 15:23:12,048 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68 pTM=0.415 ipTM=0.137 tol=2.53
2024-12-07 15:23:28,471 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=68.5 pTM=0.413 ipTM=0.132 tol=2.87
2024-12-07 15:23:44,905 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=68.6 pTM=0.412 ipTM=0.134 tol=2.95
2024-12-07 15:24:01,325 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.9 pTM=0.415 ipTM=0.139 tol=2.16
2024-12-07 15:24:17,732 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.6 pTM=0.416 ipTM=0.143 tol=2.5
2024-12-07 15:24:34,147 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.8 pTM=0.412 ipTM=0.138 tol=2.12
2024-12-07 15:24:50,566 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.9 pTM=0.411 ipTM=0.137 tol=1.88
2024-12-07 15:25:06,967 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.9 pTM=0.411 ipTM=0.136 tol=1.81
2024-12-07 15:25:23,372 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.8 pTM=0.414 ipTM=0.14 tol=2.1
2024-12-07 15:25:39,785 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68.4 pTM=0.41 ipTM=0.137 tol=2.24
2024-12-07 15:25:56,179 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68.2 pTM=0.411 ipTM=0.138 tol=1.61
2024-12-07 15:26:12,582 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68.2 pTM=0.409 ipTM=0.136 tol=1.96
2024-12-07 15:26:28,989 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=68.6 pTM=0.409 ipTM=0.135 tol=1.92
2024-12-07 15:26:45,397 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68.5 pTM=0.408 ipTM=0.136 tol=1.43
2024-12-07 15:27:01,813 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=68.7 pTM=0.412 ipTM=0.139 tol=3.19
2024-12-07 15:27:18,221 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=68.6 pTM=0.411 ipTM=0.14 tol=0.777
2024-12-07 15:27:34,627 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68.6 pTM=0.411 ipTM=0.14 tol=2.4
2024-12-07 15:27:51,041 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68.5 pTM=0.413 ipTM=0.144 tol=2.33
2024-12-07 15:28:07,444 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.6 pTM=0.414 ipTM=0.145 tol=1.51
2024-12-07 15:28:23,846 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=69 pTM=0.412 ipTM=0.139 tol=1.37
2024-12-07 15:28:40,260 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=69.1 pTM=0.411 ipTM=0.136 tol=2.46
2024-12-07 15:28:56,672 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.6 pTM=0.409 ipTM=0.137 tol=1.64
2024-12-07 15:29:13,089 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=68.6 pTM=0.408 ipTM=0.136 tol=1.77
2024-12-07 15:29:29,496 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68.6 pTM=0.41 ipTM=0.137 tol=1.73
2024-12-07 15:29:45,906 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68.4 pTM=0.409 ipTM=0.137 tol=1.99
2024-12-07 15:30:02,323 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=68.2 pTM=0.408 ipTM=0.138 tol=1.91
2024-12-07 15:30:18,736 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.4 pTM=0.408 ipTM=0.137 tol=1.36
2024-12-07 15:30:35,147 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.4 pTM=0.41 ipTM=0.14 tol=2.27
2024-12-07 15:30:35,148 alphafold2_multimer_v3_model_2_seed_000 took 508.7s (30 recycles)
2024-12-07 15:30:51,976 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=64.2 pTM=0.477 ipTM=0.323
2024-12-07 15:31:08,352 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=64.7 pTM=0.431 ipTM=0.181 tol=8.74
2024-12-07 15:31:24,729 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=65.8 pTM=0.424 ipTM=0.169 tol=4.28
2024-12-07 15:31:41,161 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.2 pTM=0.413 ipTM=0.143 tol=3.81
2024-12-07 15:31:57,570 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.7 pTM=0.422 ipTM=0.161 tol=4.52
2024-12-07 15:32:13,974 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=67.1 pTM=0.424 ipTM=0.199 tol=4.61
2024-12-07 15:32:30,365 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=66.9 pTM=0.423 ipTM=0.184 tol=2.56
2024-12-07 15:32:46,758 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=66.9 pTM=0.42 ipTM=0.174 tol=2.11
2024-12-07 15:33:03,145 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=66.8 pTM=0.417 ipTM=0.167 tol=2.26
2024-12-07 15:33:19,553 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67 pTM=0.413 ipTM=0.155 tol=3.17
2024-12-07 15:33:35,938 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=66.9 pTM=0.412 ipTM=0.176 tol=2.21
2024-12-07 15:33:52,348 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67 pTM=0.411 ipTM=0.151 tol=2.02
2024-12-07 15:34:08,746 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=66.6 pTM=0.413 ipTM=0.182 tol=2.29
2024-12-07 15:34:25,172 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=66.2 pTM=0.409 ipTM=0.146 tol=2.71
2024-12-07 15:34:41,573 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=66.3 pTM=0.408 ipTM=0.182 tol=1.79
2024-12-07 15:34:57,997 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=66.6 pTM=0.409 ipTM=0.161 tol=1.55
2024-12-07 15:35:14,413 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=66.2 pTM=0.407 ipTM=0.158 tol=1.88
2024-12-07 15:35:30,839 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=66.6 pTM=0.407 ipTM=0.141 tol=2.19
2024-12-07 15:35:47,249 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=66.3 pTM=0.41 ipTM=0.167 tol=2.52
2024-12-07 15:36:03,649 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=66.7 pTM=0.412 ipTM=0.17 tol=1.65
2024-12-07 15:36:20,065 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=66.5 pTM=0.414 ipTM=0.177 tol=1.19
2024-12-07 15:36:36,477 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=66.6 pTM=0.41 ipTM=0.179 tol=3.1
2024-12-07 15:36:52,889 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=66.8 pTM=0.408 ipTM=0.149 tol=3.02
2024-12-07 15:37:09,303 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=66.8 pTM=0.411 ipTM=0.169 tol=2.21
2024-12-07 15:37:25,709 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=66.4 pTM=0.408 ipTM=0.172 tol=1.31
2024-12-07 15:37:42,115 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=66.7 pTM=0.409 ipTM=0.161 tol=2.01
2024-12-07 15:37:58,502 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=66.7 pTM=0.412 ipTM=0.197 tol=2.11
2024-12-07 15:38:14,899 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=66.7 pTM=0.411 ipTM=0.16 tol=2.03
2024-12-07 15:38:31,298 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=66.6 pTM=0.41 ipTM=0.152 tol=1.91
2024-12-07 15:38:47,708 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=66.4 pTM=0.407 ipTM=0.153 tol=2.01
2024-12-07 15:39:04,111 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67 pTM=0.413 ipTM=0.191 tol=2.44
2024-12-07 15:39:04,112 alphafold2_multimer_v3_model_3_seed_000 took 508.5s (30 recycles)
2024-12-07 15:39:20,951 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.9 pTM=0.462 ipTM=0.291
2024-12-07 15:39:37,391 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=62.2 pTM=0.419 ipTM=0.159 tol=11.4
2024-12-07 15:39:53,822 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=63.7 pTM=0.411 ipTM=0.149 tol=7.45
2024-12-07 15:40:10,251 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.4 pTM=0.406 ipTM=0.136 tol=3.95
2024-12-07 15:40:26,679 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.7 pTM=0.405 ipTM=0.137 tol=2.92
2024-12-07 15:40:43,099 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.4 pTM=0.406 ipTM=0.139 tol=3.78
2024-12-07 15:40:59,508 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=65.6 pTM=0.407 ipTM=0.149 tol=3.12
2024-12-07 15:41:15,933 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=65.4 pTM=0.406 ipTM=0.14 tol=1.9
2024-12-07 15:41:32,346 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.4 pTM=0.41 ipTM=0.153 tol=2.63
2024-12-07 15:41:48,759 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.9 pTM=0.407 ipTM=0.151 tol=2.16
2024-12-07 15:42:05,173 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65.6 pTM=0.401 ipTM=0.136 tol=3.4
2024-12-07 15:42:21,604 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.9 pTM=0.405 ipTM=0.136 tol=2.68
2024-12-07 15:42:38,012 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.2 pTM=0.404 ipTM=0.138 tol=2.49
2024-12-07 15:42:54,431 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.9 pTM=0.403 ipTM=0.135 tol=1.97
2024-12-07 15:43:10,824 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.9 pTM=0.401 ipTM=0.136 tol=2.35
2024-12-07 15:43:27,253 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=65.4 pTM=0.4 ipTM=0.13 tol=1.94
2024-12-07 15:43:43,665 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65 pTM=0.399 ipTM=0.133 tol=1.95
2024-12-07 15:44:00,081 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=65.3 pTM=0.4 ipTM=0.131 tol=3.35
2024-12-07 15:44:16,484 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=65 pTM=0.401 ipTM=0.132 tol=4.24
2024-12-07 15:44:32,911 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=65.2 pTM=0.403 ipTM=0.132 tol=2.41
2024-12-07 15:44:49,316 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.8 pTM=0.405 ipTM=0.138 tol=3.64
2024-12-07 15:45:05,738 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=65.2 pTM=0.403 ipTM=0.135 tol=3.92
2024-12-07 15:45:22,159 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=66 pTM=0.405 ipTM=0.136 tol=3.65
2024-12-07 15:45:38,579 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.2 pTM=0.402 ipTM=0.132 tol=3.35
2024-12-07 15:45:54,990 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.3 pTM=0.403 ipTM=0.137 tol=1.9
2024-12-07 15:46:11,421 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.9 pTM=0.402 ipTM=0.133 tol=2.79
2024-12-07 15:46:27,837 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.2 pTM=0.402 ipTM=0.136 tol=2.06
2024-12-07 15:46:44,268 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=65.3 pTM=0.401 ipTM=0.129 tol=2.36
2024-12-07 15:47:00,696 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=65 pTM=0.401 ipTM=0.134 tol=1.44
2024-12-07 15:47:17,114 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=65.3 pTM=0.396 ipTM=0.129 tol=3.5
2024-12-07 15:47:33,525 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=65.6 pTM=0.4 ipTM=0.133 tol=2.38
2024-12-07 15:47:33,526 alphafold2_multimer_v3_model_4_seed_000 took 508.9s (30 recycles)
2024-12-07 15:47:50,380 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=62.4 pTM=0.45 ipTM=0.28
2024-12-07 15:48:06,764 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=64.1 pTM=0.424 ipTM=0.171 tol=7.74
2024-12-07 15:48:23,173 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.1 pTM=0.41 ipTM=0.146 tol=5.77
2024-12-07 15:48:39,596 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.8 pTM=0.405 ipTM=0.134 tol=7.1
2024-12-07 15:48:56,009 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=66.3 pTM=0.406 ipTM=0.157 tol=6.82
2024-12-07 15:49:12,409 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=67 pTM=0.413 ipTM=0.195 tol=6.48
2024-12-07 15:49:28,797 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.7 pTM=0.407 ipTM=0.18 tol=1.58
2024-12-07 15:49:45,189 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.9 pTM=0.415 ipTM=0.201 tol=4.46
2024-12-07 15:50:01,594 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67 pTM=0.414 ipTM=0.196 tol=5.05
2024-12-07 15:50:17,993 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=66.9 pTM=0.407 ipTM=0.179 tol=3.59
2024-12-07 15:50:34,398 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=66.7 pTM=0.405 ipTM=0.192 tol=2.59
2024-12-07 15:50:50,800 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=66.8 pTM=0.409 ipTM=0.186 tol=1.94
2024-12-07 15:51:07,196 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=66.4 pTM=0.409 ipTM=0.2 tol=1.53
2024-12-07 15:51:23,626 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66.1 pTM=0.4 ipTM=0.166 tol=2.44
2024-12-07 15:51:40,082 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.6 pTM=0.394 ipTM=0.138 tol=4.69
2024-12-07 15:51:56,532 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.8 pTM=0.396 ipTM=0.142 tol=4.72
2024-12-07 15:52:12,991 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.7 pTM=0.396 ipTM=0.138 tol=3.19
2024-12-07 15:52:29,472 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=65.8 pTM=0.394 ipTM=0.133 tol=2.53
2024-12-07 15:52:45,920 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.8 pTM=0.397 ipTM=0.135 tol=5.91
2024-12-07 15:53:02,368 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.9 pTM=0.398 ipTM=0.157 tol=3.12
2024-12-07 15:53:18,819 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.7 pTM=0.397 ipTM=0.151 tol=2.7
2024-12-07 15:53:35,276 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65.6 pTM=0.39 ipTM=0.134 tol=2.34
2024-12-07 15:53:51,750 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.9 pTM=0.393 ipTM=0.131 tol=6.36
2024-12-07 15:54:08,215 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=65.5 pTM=0.394 ipTM=0.131 tol=5.66
2024-12-07 15:54:24,675 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.2 pTM=0.39 ipTM=0.13 tol=2.68
2024-12-07 15:54:41,141 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.2 pTM=0.389 ipTM=0.128 tol=5.68
2024-12-07 15:54:57,602 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=65.2 pTM=0.392 ipTM=0.124 tol=3.86
2024-12-07 15:55:14,050 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.4 pTM=0.394 ipTM=0.127 tol=3.39
2024-12-07 15:55:30,507 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.4 pTM=0.394 ipTM=0.126 tol=2.41
2024-12-07 15:55:46,970 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65.4 pTM=0.392 ipTM=0.125 tol=2.8
2024-12-07 15:56:03,447 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.7 pTM=0.396 ipTM=0.122 tol=2.15
2024-12-07 15:56:03,448 alphafold2_multimer_v3_model_5_seed_000 took 509.4s (30 recycles)
2024-12-07 15:56:03,950 reranking models by 'multimer' metric
2024-12-07 15:56:06,881 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 15:57:09,074 Relaxation took 65.1s
2024-12-07 15:57:09,074 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67 pTM=0.413 ipTM=0.191
2024-12-07 15:58:31,569 Relaxation took 82.5s
2024-12-07 15:58:31,569 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=65.7 pTM=0.391 ipTM=0.162
2024-12-07 15:59:26,992 Relaxation took 55.4s
2024-12-07 15:59:26,993 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.4 pTM=0.41 ipTM=0.14
2024-12-07 16:00:14,995 Relaxation took 48.0s
2024-12-07 16:00:14,995 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=65.6 pTM=0.4 ipTM=0.133
2024-12-07 16:01:19,428 Relaxation took 64.4s
2024-12-07 16:01:19,428 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.7 pTM=0.396 ipTM=0.122
2024-12-07 16:01:21,048 Done