2024-12-07 15:12:21,127 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 15:12:21,441 Running on GPU
2024-12-07 15:12:22,263 Found 6 citations for tools or databases
2024-12-07 15:12:22,264 Query 1/1: RABGEF1_RGS9BP (length 726)
2024-12-07 15:12:22,530 Sleeping for 5s. Reason: PENDING
2024-12-07 15:12:27,792 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:12:34,051 Sleeping for 7s. Reason: RUNNING
2024-12-07 15:12:41,315 Sleeping for 5s. Reason: RUNNING
2024-12-07 15:12:46,569 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:12:52,831 Sleeping for 5s. Reason: RUNNING
2024-12-07 15:12:58,085 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:13:07,349 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:13:16,607 Sleeping for 5s. Reason: RUNNING
2024-12-07 15:13:21,867 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:13:31,132 Sleeping for 8s. Reason: RUNNING
2024-12-07 15:13:39,398 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:13:45,666 Sleeping for 8s. Reason: RUNNING
2024-12-07 15:13:55,340 Sleeping for 6s. Reason: PENDING
2024-12-07 15:14:01,595 Sleeping for 10s. Reason: RUNNING
2024-12-07 15:14:11,861 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:14:18,117 Sleeping for 7s. Reason: RUNNING
2024-12-07 15:14:25,373 Sleeping for 8s. Reason: RUNNING
2024-12-07 15:14:33,641 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:14:42,905 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:14:49,163 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:14:57,080 Setting max_seq=508, max_extra_seq=2048
2024-12-07 15:17:34,599 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=62.9 pTM=0.473 ipTM=0.148
2024-12-07 15:17:45,263 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66 pTM=0.472 ipTM=0.136 tol=7.9
2024-12-07 15:17:55,952 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=65.7 pTM=0.469 ipTM=0.148 tol=5.33
2024-12-07 15:18:06,654 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.6 pTM=0.475 ipTM=0.163 tol=12.8
2024-12-07 15:18:17,362 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66.7 pTM=0.466 ipTM=0.141 tol=4.57
2024-12-07 15:18:28,098 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.2 pTM=0.462 ipTM=0.136 tol=8.98
2024-12-07 15:18:38,839 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.1 pTM=0.461 ipTM=0.143 tol=6.59
2024-12-07 15:18:49,601 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66 pTM=0.459 ipTM=0.139 tol=7.23
2024-12-07 15:19:00,366 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.1 pTM=0.462 ipTM=0.146 tol=5.13
2024-12-07 15:19:11,150 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.6 pTM=0.467 ipTM=0.148 tol=8.56
2024-12-07 15:19:21,949 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66 pTM=0.458 ipTM=0.141 tol=7.7
2024-12-07 15:19:32,746 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=65.5 pTM=0.46 ipTM=0.142 tol=5.43
2024-12-07 15:19:43,542 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=65.6 pTM=0.455 ipTM=0.14 tol=1.75
2024-12-07 15:19:54,345 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=65.9 pTM=0.46 ipTM=0.142 tol=3.21
2024-12-07 15:20:05,141 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66 pTM=0.462 ipTM=0.142 tol=4.08
2024-12-07 15:20:15,951 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.6 pTM=0.466 ipTM=0.155 tol=9.9
2024-12-07 15:20:26,756 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=65.8 pTM=0.456 ipTM=0.142 tol=7.89
2024-12-07 15:20:37,555 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=65.1 pTM=0.459 ipTM=0.143 tol=8.93
2024-12-07 15:20:48,374 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=65.9 pTM=0.461 ipTM=0.146 tol=9.38
2024-12-07 15:20:59,184 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=65.6 pTM=0.459 ipTM=0.141 tol=4.7
2024-12-07 15:21:09,995 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=65.6 pTM=0.458 ipTM=0.139 tol=3.95
2024-12-07 15:21:20,812 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=65.8 pTM=0.461 ipTM=0.142 tol=5.45
2024-12-07 15:21:31,627 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.3 pTM=0.465 ipTM=0.148 tol=5.5
2024-12-07 15:21:42,450 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66 pTM=0.465 ipTM=0.142 tol=7.75
2024-12-07 15:21:53,263 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=65.6 pTM=0.46 ipTM=0.14 tol=5.12
2024-12-07 15:22:04,086 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=65.7 pTM=0.46 ipTM=0.139 tol=5.21
2024-12-07 15:22:14,900 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=65.8 pTM=0.462 ipTM=0.139 tol=4.93
2024-12-07 15:22:25,717 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=65.7 pTM=0.463 ipTM=0.141 tol=3.15
2024-12-07 15:22:36,535 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=65.7 pTM=0.461 ipTM=0.143 tol=9
2024-12-07 15:22:47,366 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.1 pTM=0.463 ipTM=0.142 tol=9.54
2024-12-07 15:22:58,179 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66.1 pTM=0.461 ipTM=0.139 tol=5.57
2024-12-07 15:22:58,180 alphafold2_multimer_v3_model_1_seed_000 took 476.5s (30 recycles)
2024-12-07 15:23:09,357 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64.2 pTM=0.486 ipTM=0.157
2024-12-07 15:23:20,224 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=67.6 pTM=0.478 ipTM=0.126 tol=6.63
2024-12-07 15:23:31,095 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.4 pTM=0.481 ipTM=0.136 tol=5.41
2024-12-07 15:23:41,970 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67.3 pTM=0.477 ipTM=0.133 tol=6.58
2024-12-07 15:23:52,835 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.2 pTM=0.475 ipTM=0.132 tol=6.82
2024-12-07 15:24:03,704 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.8 pTM=0.475 ipTM=0.133 tol=2.51
2024-12-07 15:24:14,571 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67.7 pTM=0.476 ipTM=0.136 tol=2.13
2024-12-07 15:24:25,438 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=67.6 pTM=0.475 ipTM=0.131 tol=1.57
2024-12-07 15:24:36,302 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=67.8 pTM=0.473 ipTM=0.135 tol=1.46
2024-12-07 15:24:47,178 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=67.8 pTM=0.477 ipTM=0.134 tol=4.06
2024-12-07 15:24:58,050 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=67.9 pTM=0.476 ipTM=0.136 tol=2.55
2024-12-07 15:25:08,924 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=67.8 pTM=0.477 ipTM=0.137 tol=2
2024-12-07 15:25:19,797 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=67.6 pTM=0.473 ipTM=0.133 tol=1.53
2024-12-07 15:25:30,673 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=67.9 pTM=0.476 ipTM=0.135 tol=2.8
2024-12-07 15:25:41,551 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=67.8 pTM=0.476 ipTM=0.132 tol=3.07
2024-12-07 15:25:52,428 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=67.6 pTM=0.472 ipTM=0.14 tol=9.57
2024-12-07 15:26:03,309 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68.1 pTM=0.474 ipTM=0.138 tol=5.98
2024-12-07 15:26:14,182 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.4 pTM=0.472 ipTM=0.138 tol=3.73
2024-12-07 15:26:25,057 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67.8 pTM=0.477 ipTM=0.137 tol=4.17
2024-12-07 15:26:35,931 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68 pTM=0.476 ipTM=0.136 tol=2.46
2024-12-07 15:26:46,802 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=67.7 pTM=0.475 ipTM=0.134 tol=2.62
2024-12-07 15:26:57,687 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=67.9 pTM=0.477 ipTM=0.139 tol=2.42
2024-12-07 15:27:08,564 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.8 pTM=0.475 ipTM=0.135 tol=2.83
2024-12-07 15:27:19,431 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.6 pTM=0.476 ipTM=0.138 tol=4.04
2024-12-07 15:27:30,308 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=67.6 pTM=0.473 ipTM=0.135 tol=4.76
2024-12-07 15:27:41,184 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67.6 pTM=0.473 ipTM=0.135 tol=3.1
2024-12-07 15:27:52,055 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=67.7 pTM=0.478 ipTM=0.136 tol=4.03
2024-12-07 15:28:02,925 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67.7 pTM=0.478 ipTM=0.138 tol=2.92
2024-12-07 15:28:13,797 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=67.5 pTM=0.476 ipTM=0.139 tol=3.79
2024-12-07 15:28:24,673 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=67.9 pTM=0.478 ipTM=0.142 tol=4.03
2024-12-07 15:28:35,546 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=67.8 pTM=0.472 ipTM=0.137 tol=4.18
2024-12-07 15:28:35,546 alphafold2_multimer_v3_model_2_seed_000 took 337.0s (30 recycles)
2024-12-07 15:28:46,742 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=61.1 pTM=0.471 ipTM=0.177
2024-12-07 15:28:57,637 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63.1 pTM=0.461 ipTM=0.12 tol=18.3
2024-12-07 15:29:08,522 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63.2 pTM=0.465 ipTM=0.134 tol=8.77
2024-12-07 15:29:19,388 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.6 pTM=0.466 ipTM=0.135 tol=8.21
2024-12-07 15:29:30,257 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=64.4 pTM=0.467 ipTM=0.131 tol=6.8
2024-12-07 15:29:41,112 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64.6 pTM=0.469 ipTM=0.134 tol=4.27
2024-12-07 15:29:51,993 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.1 pTM=0.471 ipTM=0.133 tol=4.29
2024-12-07 15:30:02,851 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=64.4 pTM=0.469 ipTM=0.132 tol=4.88
2024-12-07 15:30:13,710 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=64.8 pTM=0.473 ipTM=0.144 tol=3.61
2024-12-07 15:30:24,562 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=64.8 pTM=0.477 ipTM=0.147 tol=2.81
2024-12-07 15:30:35,416 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=64.7 pTM=0.472 ipTM=0.136 tol=3.2
2024-12-07 15:30:46,294 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.1 pTM=0.474 ipTM=0.164 tol=15.1
2024-12-07 15:30:57,150 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=64.4 pTM=0.475 ipTM=0.154 tol=4.79
2024-12-07 15:31:08,033 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=63.7 pTM=0.466 ipTM=0.125 tol=6.79
2024-12-07 15:31:18,902 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=63.9 pTM=0.469 ipTM=0.135 tol=7.62
2024-12-07 15:31:29,757 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=63.8 pTM=0.471 ipTM=0.135 tol=8.04
2024-12-07 15:31:40,630 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=64.2 pTM=0.468 ipTM=0.129 tol=5.17
2024-12-07 15:31:51,503 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=63 pTM=0.467 ipTM=0.127 tol=5.82
2024-12-07 15:32:02,371 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63.8 pTM=0.469 ipTM=0.134 tol=6.02
2024-12-07 15:32:13,235 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.5 pTM=0.468 ipTM=0.141 tol=9.82
2024-12-07 15:32:24,106 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=64 pTM=0.469 ipTM=0.129 tol=5.52
2024-12-07 15:32:34,971 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.6 pTM=0.471 ipTM=0.124 tol=5.66
2024-12-07 15:32:45,829 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=64 pTM=0.47 ipTM=0.131 tol=4.19
2024-12-07 15:32:56,710 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.9 pTM=0.47 ipTM=0.128 tol=3.78
2024-12-07 15:33:07,581 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63.6 pTM=0.471 ipTM=0.133 tol=4.34
2024-12-07 15:33:18,454 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63.7 pTM=0.469 ipTM=0.134 tol=2.37
2024-12-07 15:33:29,324 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63.8 pTM=0.468 ipTM=0.129 tol=2.68
2024-12-07 15:33:40,202 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.5 pTM=0.476 ipTM=0.162 tol=13.5
2024-12-07 15:33:51,071 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.9 pTM=0.474 ipTM=0.134 tol=6.04
2024-12-07 15:34:01,940 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63.6 pTM=0.471 ipTM=0.124 tol=11.5
2024-12-07 15:34:12,811 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64.1 pTM=0.467 ipTM=0.127 tol=6.18
2024-12-07 15:34:12,811 alphafold2_multimer_v3_model_3_seed_000 took 336.9s (30 recycles)
2024-12-07 15:34:24,007 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.5 pTM=0.555 ipTM=0.435
2024-12-07 15:34:34,881 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=61.8 pTM=0.486 ipTM=0.167 tol=11.3
2024-12-07 15:34:45,745 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=62.8 pTM=0.479 ipTM=0.152 tol=6.45
2024-12-07 15:34:56,614 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=63.7 pTM=0.473 ipTM=0.144 tol=2.71
2024-12-07 15:35:07,482 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.5 pTM=0.469 ipTM=0.137 tol=2.48
2024-12-07 15:35:18,356 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.9 pTM=0.471 ipTM=0.138 tol=1.78
2024-12-07 15:35:29,243 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=65.4 pTM=0.472 ipTM=0.133 tol=1.79
2024-12-07 15:35:40,118 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.9 pTM=0.468 ipTM=0.131 tol=1.55
2024-12-07 15:35:51,002 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.6 pTM=0.467 ipTM=0.132 tol=1.84
2024-12-07 15:36:01,881 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.1 pTM=0.47 ipTM=0.131 tol=2.01
2024-12-07 15:36:12,751 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64.4 pTM=0.466 ipTM=0.133 tol=2.77
2024-12-07 15:36:23,635 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.3 pTM=0.468 ipTM=0.134 tol=1.75
2024-12-07 15:36:34,503 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.6 pTM=0.466 ipTM=0.133 tol=1.95
2024-12-07 15:36:45,378 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.9 pTM=0.468 ipTM=0.133 tol=1.76
2024-12-07 15:36:56,248 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.9 pTM=0.468 ipTM=0.135 tol=2
2024-12-07 15:37:07,109 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.9 pTM=0.466 ipTM=0.131 tol=1.56
2024-12-07 15:37:17,973 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65 pTM=0.468 ipTM=0.137 tol=2.34
2024-12-07 15:37:28,843 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64.6 pTM=0.464 ipTM=0.13 tol=2.83
2024-12-07 15:37:39,716 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=65 pTM=0.467 ipTM=0.13 tol=2.74
2024-12-07 15:37:50,586 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.8 pTM=0.465 ipTM=0.128 tol=1.92
2024-12-07 15:38:01,451 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.9 pTM=0.466 ipTM=0.135 tol=3.26
2024-12-07 15:38:12,316 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=65 pTM=0.464 ipTM=0.13 tol=2.41
2024-12-07 15:38:23,167 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65.1 pTM=0.469 ipTM=0.138 tol=2.7
2024-12-07 15:38:34,023 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.6 pTM=0.465 ipTM=0.132 tol=6.51
2024-12-07 15:38:44,877 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.8 pTM=0.461 ipTM=0.129 tol=8.11
2024-12-07 15:38:55,746 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=65 pTM=0.465 ipTM=0.133 tol=3.57
2024-12-07 15:39:06,607 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.1 pTM=0.467 ipTM=0.135 tol=3.02
2024-12-07 15:39:17,467 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.9 pTM=0.466 ipTM=0.138 tol=2.27
2024-12-07 15:39:28,326 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.9 pTM=0.469 ipTM=0.135 tol=2.15
2024-12-07 15:39:39,187 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=65 pTM=0.469 ipTM=0.132 tol=2.55
2024-12-07 15:39:50,049 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.9 pTM=0.464 ipTM=0.129 tol=2.11
2024-12-07 15:39:50,049 alphafold2_multimer_v3_model_4_seed_000 took 336.9s (30 recycles)
2024-12-07 15:40:01,264 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=60.2 pTM=0.479 ipTM=0.169
2024-12-07 15:40:12,141 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=61.9 pTM=0.471 ipTM=0.16 tol=11.5
2024-12-07 15:40:23,013 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=63.7 pTM=0.469 ipTM=0.142 tol=8.25
2024-12-07 15:40:33,888 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=64.5 pTM=0.472 ipTM=0.144 tol=3.19
2024-12-07 15:40:44,752 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=64.6 pTM=0.475 ipTM=0.15 tol=3.99
2024-12-07 15:40:55,622 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.1 pTM=0.469 ipTM=0.133 tol=2.76
2024-12-07 15:41:06,522 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.5 pTM=0.47 ipTM=0.133 tol=8.45
2024-12-07 15:41:17,408 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=65 pTM=0.469 ipTM=0.122 tol=4.23
2024-12-07 15:41:28,251 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=64.6 pTM=0.469 ipTM=0.129 tol=6.52
2024-12-07 15:41:39,110 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.1 pTM=0.469 ipTM=0.131 tol=2.21
2024-12-07 15:41:49,961 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=64.6 pTM=0.468 ipTM=0.133 tol=5.25
2024-12-07 15:42:00,845 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=64.9 pTM=0.469 ipTM=0.124 tol=3.35
2024-12-07 15:42:11,693 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=64.8 pTM=0.468 ipTM=0.131 tol=3.12
2024-12-07 15:42:22,543 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=64.9 pTM=0.472 ipTM=0.139 tol=6.55
2024-12-07 15:42:33,376 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=64.9 pTM=0.479 ipTM=0.163 tol=3.58
2024-12-07 15:42:44,222 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=64.9 pTM=0.47 ipTM=0.134 tol=3.05
2024-12-07 15:42:55,106 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.2 pTM=0.471 ipTM=0.133 tol=10
2024-12-07 15:43:05,970 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=64.7 pTM=0.468 ipTM=0.125 tol=5.53
2024-12-07 15:43:16,812 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=64.6 pTM=0.47 ipTM=0.136 tol=7.91
2024-12-07 15:43:27,683 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=64.8 pTM=0.466 ipTM=0.129 tol=4.79
2024-12-07 15:43:38,542 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=64.7 pTM=0.47 ipTM=0.135 tol=7.45
2024-12-07 15:43:49,401 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=64.8 pTM=0.467 ipTM=0.128 tol=4.77
2024-12-07 15:44:00,240 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=64.5 pTM=0.466 ipTM=0.131 tol=5.24
2024-12-07 15:44:11,085 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=64.4 pTM=0.465 ipTM=0.13 tol=5.09
2024-12-07 15:44:21,918 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=64.6 pTM=0.477 ipTM=0.157 tol=4.91
2024-12-07 15:44:32,759 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65 pTM=0.467 ipTM=0.132 tol=2.62
2024-12-07 15:44:43,617 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=64.9 pTM=0.469 ipTM=0.131 tol=8.79
2024-12-07 15:44:54,473 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=64.8 pTM=0.467 ipTM=0.126 tol=3.66
2024-12-07 15:45:05,315 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=64.8 pTM=0.469 ipTM=0.131 tol=4.04
2024-12-07 15:45:16,168 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65.4 pTM=0.474 ipTM=0.138 tol=4.05
2024-12-07 15:45:27,001 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.1 pTM=0.475 ipTM=0.147 tol=3.47
2024-12-07 15:45:27,001 alphafold2_multimer_v3_model_5_seed_000 took 336.6s (30 recycles)
2024-12-07 15:45:27,337 reranking models by 'multimer' metric
2024-12-07 15:45:30,247 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 15:46:07,007 Relaxation took 39.7s
2024-12-07 15:46:07,008 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.1 pTM=0.475 ipTM=0.147
2024-12-07 15:46:26,247 Relaxation took 19.2s
2024-12-07 15:46:26,247 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=67.8 pTM=0.472 ipTM=0.137
2024-12-07 15:47:08,351 Relaxation took 42.1s
2024-12-07 15:47:08,351 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66.1 pTM=0.461 ipTM=0.139
2024-12-07 15:47:33,887 Relaxation took 25.5s
2024-12-07 15:47:33,887 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.9 pTM=0.464 ipTM=0.129
2024-12-07 15:48:22,518 Relaxation took 48.6s
2024-12-07 15:48:22,519 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64.1 pTM=0.467 ipTM=0.127
2024-12-07 15:48:23,849 Done