2024-12-07 15:18:34,239 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 15:18:34,591 Running on GPU
2024-12-07 15:18:37,744 Found 6 citations for tools or databases
2024-12-07 15:18:37,744 Query 1/1: RAD18_LLGL2 (length 1515)
2024-12-07 15:18:38,039 Sleeping for 8s. Reason: PENDING
2024-12-07 15:18:46,295 Sleeping for 5s. Reason: RUNNING
2024-12-07 15:18:51,553 Sleeping for 6s. Reason: RUNNING
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2024-12-07 15:19:25,855 Sleeping for 6s. Reason: RUNNING
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2024-12-07 15:19:38,365 Sleeping for 5s. Reason: RUNNING
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2024-12-07 15:21:04,640 Sleeping for 8s. Reason: RUNNING
2024-12-07 15:21:12,895 Sleeping for 8s. Reason: RUNNING
2024-12-07 15:21:21,155 Sleeping for 10s. Reason: RUNNING
2024-12-07 15:21:31,418 Sleeping for 7s. Reason: RUNNING
2024-12-07 15:21:38,670 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:21:47,925 Sleeping for 10s. Reason: RUNNING
2024-12-07 15:21:58,183 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:22:04,444 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:22:10,697 Sleeping for 7s. Reason: RUNNING
2024-12-07 15:22:17,950 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:22:24,204 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:22:33,468 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:22:42,731 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:22:48,995 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:22:58,251 Sleeping for 5s. Reason: RUNNING
2024-12-07 15:23:05,167 Sleeping for 8s. Reason: PENDING
2024-12-07 15:23:13,422 Sleeping for 8s. Reason: RUNNING
2024-12-07 15:23:21,692 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:23:30,949 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:23:40,223 Sleeping for 8s. Reason: RUNNING
2024-12-07 15:23:48,483 Sleeping for 10s. Reason: RUNNING
2024-12-07 15:23:58,744 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:24:04,998 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:24:14,252 Sleeping for 8s. Reason: RUNNING
2024-12-07 15:24:22,512 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:24:28,771 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:24:35,034 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:24:41,297 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:24:50,555 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:24:59,807 Sleeping for 7s. Reason: RUNNING
2024-12-07 15:25:07,058 Sleeping for 7s. Reason: RUNNING
2024-12-07 15:25:14,331 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:25:26,966 Setting max_seq=508, max_extra_seq=2048
2024-12-07 15:29:15,472 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.1 pTM=0.644 ipTM=0.3
2024-12-07 15:30:22,917 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=67.2 pTM=0.629 ipTM=0.226 tol=8.82
2024-12-07 15:31:30,441 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=67.2 pTM=0.63 ipTM=0.233 tol=7.52
2024-12-07 15:32:37,990 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=67.4 pTM=0.628 ipTM=0.217 tol=6.61
2024-12-07 15:33:45,588 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66.9 pTM=0.63 ipTM=0.231 tol=4.89
2024-12-07 15:34:53,183 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.9 pTM=0.63 ipTM=0.236 tol=5.98
2024-12-07 15:36:00,783 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.8 pTM=0.632 ipTM=0.263 tol=5.17
2024-12-07 15:37:08,385 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67.1 pTM=0.634 ipTM=0.294 tol=2.88
2024-12-07 15:38:15,976 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67.1 pTM=0.632 ipTM=0.277 tol=2.07
2024-12-07 15:39:23,572 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67.2 pTM=0.63 ipTM=0.283 tol=2.53
2024-12-07 15:40:31,142 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.3 pTM=0.631 ipTM=0.288 tol=2.1
2024-12-07 15:41:38,746 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.2 pTM=0.631 ipTM=0.297 tol=2.36
2024-12-07 15:42:46,316 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.1 pTM=0.629 ipTM=0.279 tol=1.58
2024-12-07 15:43:53,845 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.1 pTM=0.631 ipTM=0.295 tol=1.44
2024-12-07 15:45:01,359 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.1 pTM=0.63 ipTM=0.278 tol=1.29
2024-12-07 15:46:08,913 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.2 pTM=0.63 ipTM=0.279 tol=1.52
2024-12-07 15:47:16,473 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.2 pTM=0.628 ipTM=0.26 tol=1.95
2024-12-07 15:48:24,074 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.2 pTM=0.628 ipTM=0.265 tol=1.98
2024-12-07 15:49:31,634 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=67 pTM=0.629 ipTM=0.267 tol=2.46
2024-12-07 15:50:39,233 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.1 pTM=0.629 ipTM=0.262 tol=2.19
2024-12-07 15:51:46,857 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.1 pTM=0.629 ipTM=0.242 tol=4.55
2024-12-07 15:52:54,471 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=67 pTM=0.629 ipTM=0.256 tol=2.71
2024-12-07 15:54:02,085 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=67 pTM=0.63 ipTM=0.272 tol=1.84
2024-12-07 15:55:09,663 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=67 pTM=0.631 ipTM=0.252 tol=1.8
2024-12-07 15:56:17,159 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.9 pTM=0.629 ipTM=0.241 tol=1.42
2024-12-07 15:57:24,659 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=67 pTM=0.629 ipTM=0.261 tol=1.49
2024-12-07 15:58:32,200 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67.1 pTM=0.631 ipTM=0.243 tol=2.16
2024-12-07 15:59:39,773 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67 pTM=0.629 ipTM=0.229 tol=1.8
2024-12-07 16:00:47,342 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.9 pTM=0.63 ipTM=0.229 tol=2.16
2024-12-07 16:01:54,935 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=67.1 pTM=0.629 ipTM=0.25 tol=1.85
2024-12-07 16:03:02,525 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67 pTM=0.629 ipTM=0.243 tol=2.11
2024-12-07 16:03:02,527 alphafold2_multimer_v3_model_1_seed_000 took 2250.8s (30 recycles)
2024-12-07 16:04:11,501 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=66.1 pTM=0.632 ipTM=0.228
2024-12-07 16:05:19,246 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=67.2 pTM=0.635 ipTM=0.369 tol=12.3
2024-12-07 16:06:27,038 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.9 pTM=0.629 ipTM=0.204 tol=11.1
2024-12-07 16:07:34,745 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68.3 pTM=0.656 ipTM=0.5 tol=11.5
2024-12-07 16:08:42,458 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=68.2 pTM=0.647 ipTM=0.512 tol=4.64
2024-12-07 16:09:50,200 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.6 pTM=0.646 ipTM=0.553 tol=10.5
2024-12-07 16:10:57,951 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67.4 pTM=0.637 ipTM=0.555 tol=6.42
2024-12-07 16:12:05,578 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=67.9 pTM=0.645 ipTM=0.555 tol=7.14
2024-12-07 16:13:13,258 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.8 pTM=0.658 ipTM=0.569 tol=6.39
2024-12-07 16:14:20,962 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.9 pTM=0.656 ipTM=0.579 tol=4.3
2024-12-07 16:15:28,646 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.9 pTM=0.655 ipTM=0.585 tol=5.28
2024-12-07 16:16:36,295 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.6 pTM=0.652 ipTM=0.595 tol=3.61
2024-12-07 16:17:44,021 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68.8 pTM=0.653 ipTM=0.602 tol=2.19
2024-12-07 16:18:51,637 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68.6 pTM=0.653 ipTM=0.594 tol=2.26
2024-12-07 16:19:59,242 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68.7 pTM=0.653 ipTM=0.608 tol=2.96
2024-12-07 16:21:06,851 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=68.6 pTM=0.652 ipTM=0.607 tol=2.13
2024-12-07 16:22:14,469 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68.9 pTM=0.653 ipTM=0.605 tol=1.72
2024-12-07 16:23:22,098 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=68.8 pTM=0.652 ipTM=0.612 tol=1.37
2024-12-07 16:24:29,694 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=68.7 pTM=0.651 ipTM=0.607 tol=1.68
2024-12-07 16:25:37,285 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68.5 pTM=0.649 ipTM=0.61 tol=1.35
2024-12-07 16:26:44,873 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68.6 pTM=0.651 ipTM=0.612 tol=1.34
2024-12-07 16:27:52,509 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.5 pTM=0.649 ipTM=0.607 tol=1.71
2024-12-07 16:29:00,147 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=68.7 pTM=0.65 ipTM=0.612 tol=1.59
2024-12-07 16:30:07,808 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.6 pTM=0.65 ipTM=0.607 tol=1.06
2024-12-07 16:31:15,467 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.7 pTM=0.651 ipTM=0.607 tol=1.38
2024-12-07 16:32:23,098 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=68.7 pTM=0.651 ipTM=0.61 tol=1.65
2024-12-07 16:33:30,735 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68.8 pTM=0.652 ipTM=0.608 tol=1.27
2024-12-07 16:34:38,337 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68.7 pTM=0.651 ipTM=0.606 tol=1.57
2024-12-07 16:35:45,958 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=68.7 pTM=0.651 ipTM=0.61 tol=2.13
2024-12-07 16:36:53,533 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.6 pTM=0.652 ipTM=0.606 tol=1.04
2024-12-07 16:38:01,199 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.8 pTM=0.653 ipTM=0.612 tol=1.79
2024-12-07 16:38:01,201 alphafold2_multimer_v3_model_2_seed_000 took 2097.3s (30 recycles)
2024-12-07 16:39:10,323 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=66.2 pTM=0.621 ipTM=0.198
2024-12-07 16:40:18,194 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.7 pTM=0.628 ipTM=0.39 tol=16.1
2024-12-07 16:41:25,966 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.6 pTM=0.633 ipTM=0.462 tol=9.66
2024-12-07 16:42:33,655 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.6 pTM=0.633 ipTM=0.524 tol=9.34
2024-12-07 16:43:41,386 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.2 pTM=0.637 ipTM=0.525 tol=5.46
2024-12-07 16:44:49,054 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=66.9 pTM=0.635 ipTM=0.534 tol=4.62
2024-12-07 16:45:56,660 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67.1 pTM=0.636 ipTM=0.532 tol=4.8
2024-12-07 16:47:04,235 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=66.8 pTM=0.634 ipTM=0.524 tol=3.29
2024-12-07 16:48:11,878 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=66.6 pTM=0.633 ipTM=0.537 tol=3.07
2024-12-07 16:49:19,535 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=66.5 pTM=0.632 ipTM=0.524 tol=3.82
2024-12-07 16:50:27,162 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=66.7 pTM=0.632 ipTM=0.518 tol=4.57
2024-12-07 16:51:34,790 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=66.5 pTM=0.631 ipTM=0.536 tol=2.44
2024-12-07 16:52:42,410 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=66.4 pTM=0.628 ipTM=0.538 tol=4.34
2024-12-07 16:53:50,058 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=65.9 pTM=0.625 ipTM=0.526 tol=2.83
2024-12-07 16:54:57,732 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=66.2 pTM=0.629 ipTM=0.539 tol=3.84
2024-12-07 16:56:05,374 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=66.4 pTM=0.628 ipTM=0.533 tol=9.38
2024-12-07 16:57:13,090 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=66.1 pTM=0.625 ipTM=0.542 tol=6.95
2024-12-07 16:58:20,880 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=66 pTM=0.626 ipTM=0.547 tol=7.67
2024-12-07 16:59:28,726 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=66.5 pTM=0.626 ipTM=0.566 tol=7.32
2024-12-07 17:00:36,470 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=66.1 pTM=0.624 ipTM=0.555 tol=7.35
2024-12-07 17:01:44,207 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=66.1 pTM=0.624 ipTM=0.563 tol=5.29
2024-12-07 17:02:51,927 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=65.9 pTM=0.622 ipTM=0.545 tol=6.32
2024-12-07 17:03:59,719 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=66.3 pTM=0.623 ipTM=0.56 tol=6.62
2024-12-07 17:05:07,505 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=66.2 pTM=0.622 ipTM=0.551 tol=3.47
2024-12-07 17:06:15,348 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=66.2 pTM=0.622 ipTM=0.563 tol=2.77
2024-12-07 17:07:23,170 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=66.4 pTM=0.622 ipTM=0.565 tol=2.27
2024-12-07 17:08:30,944 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=66.2 pTM=0.622 ipTM=0.564 tol=2.21
2024-12-07 17:09:38,730 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=66.2 pTM=0.621 ipTM=0.563 tol=2.59
2024-12-07 17:10:46,543 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=66.4 pTM=0.625 ipTM=0.576 tol=2.15
2024-12-07 17:11:54,335 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=66.2 pTM=0.623 ipTM=0.568 tol=4.37
2024-12-07 17:13:02,170 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=66.4 pTM=0.624 ipTM=0.575 tol=3.82
2024-12-07 17:13:02,172 alphafold2_multimer_v3_model_3_seed_000 took 2099.6s (30 recycles)
2024-12-07 17:14:11,279 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.7 pTM=0.621 ipTM=0.209
2024-12-07 17:15:19,088 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65 pTM=0.619 ipTM=0.195 tol=13.2
2024-12-07 17:16:26,899 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.4 pTM=0.623 ipTM=0.187 tol=4.3
2024-12-07 17:17:34,692 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=65.5 pTM=0.622 ipTM=0.19 tol=3.42
2024-12-07 17:18:42,407 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=65.2 pTM=0.623 ipTM=0.193 tol=5.2
2024-12-07 17:19:50,121 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.1 pTM=0.621 ipTM=0.189 tol=4.13
2024-12-07 17:20:57,867 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=65.2 pTM=0.622 ipTM=0.195 tol=4.39
2024-12-07 17:22:05,609 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=65.2 pTM=0.622 ipTM=0.19 tol=4.51
2024-12-07 17:23:13,360 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.3 pTM=0.622 ipTM=0.2 tol=5.34
2024-12-07 17:24:21,092 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.2 pTM=0.62 ipTM=0.191 tol=4.46
2024-12-07 17:25:28,911 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65.2 pTM=0.621 ipTM=0.191 tol=3.49
2024-12-07 17:26:36,775 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.1 pTM=0.619 ipTM=0.191 tol=2.38
2024-12-07 17:27:44,571 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.1 pTM=0.619 ipTM=0.197 tol=3.23
2024-12-07 17:28:52,363 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=65 pTM=0.622 ipTM=0.189 tol=6.18
2024-12-07 17:30:00,160 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.9 pTM=0.621 ipTM=0.19 tol=3.77
2024-12-07 17:31:07,998 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.9 pTM=0.62 ipTM=0.194 tol=4.27
2024-12-07 17:32:15,801 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65.1 pTM=0.62 ipTM=0.193 tol=6.09
2024-12-07 17:33:23,596 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=65.1 pTM=0.62 ipTM=0.196 tol=3.38
2024-12-07 17:34:31,354 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=65 pTM=0.619 ipTM=0.196 tol=3.25
2024-12-07 17:35:39,013 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.8 pTM=0.619 ipTM=0.192 tol=2.72
2024-12-07 17:36:46,724 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=65.1 pTM=0.62 ipTM=0.195 tol=3.31
2024-12-07 17:37:54,391 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.8 pTM=0.62 ipTM=0.193 tol=3.57
2024-12-07 17:39:02,115 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64.8 pTM=0.62 ipTM=0.193 tol=3.21
2024-12-07 17:40:09,804 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.2 pTM=0.621 ipTM=0.197 tol=3.29
2024-12-07 17:41:17,568 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.9 pTM=0.62 ipTM=0.195 tol=3.98
2024-12-07 17:42:25,344 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=65.1 pTM=0.62 ipTM=0.198 tol=3.33
2024-12-07 17:43:33,123 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.9 pTM=0.62 ipTM=0.193 tol=3.61
2024-12-07 17:44:40,955 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.9 pTM=0.621 ipTM=0.201 tol=3.74
2024-12-07 17:45:48,787 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=65 pTM=0.621 ipTM=0.198 tol=3.42
2024-12-07 17:46:56,624 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=65 pTM=0.62 ipTM=0.198 tol=3.33
2024-12-07 17:48:04,465 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=65 pTM=0.621 ipTM=0.197 tol=3.44
2024-12-07 17:48:04,466 alphafold2_multimer_v3_model_4_seed_000 took 2100.9s (30 recycles)
2024-12-07 17:49:13,637 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.9 pTM=0.621 ipTM=0.208
2024-12-07 17:50:21,496 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.6 pTM=0.625 ipTM=0.247 tol=10.2
2024-12-07 17:51:29,365 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=66.1 pTM=0.624 ipTM=0.311 tol=6.01
2024-12-07 17:52:37,262 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=66.2 pTM=0.625 ipTM=0.264 tol=5.39
2024-12-07 17:53:45,164 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=66.3 pTM=0.624 ipTM=0.239 tol=5.66
2024-12-07 17:54:53,111 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=66.2 pTM=0.623 ipTM=0.241 tol=4.62
2024-12-07 17:56:01,023 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.2 pTM=0.623 ipTM=0.233 tol=4.95
2024-12-07 17:57:08,924 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.1 pTM=0.624 ipTM=0.229 tol=5.78
2024-12-07 17:58:16,819 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.1 pTM=0.624 ipTM=0.232 tol=7.3
2024-12-07 17:59:24,712 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=66.2 pTM=0.624 ipTM=0.23 tol=2.17
2024-12-07 18:00:32,494 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=66.2 pTM=0.625 ipTM=0.225 tol=1.97
2024-12-07 18:01:40,267 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=66.1 pTM=0.624 ipTM=0.226 tol=2.64
2024-12-07 18:02:48,073 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=66.2 pTM=0.624 ipTM=0.217 tol=2.61
2024-12-07 18:03:55,848 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66 pTM=0.625 ipTM=0.23 tol=6.38
2024-12-07 18:05:03,616 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=66 pTM=0.624 ipTM=0.235 tol=3.3
2024-12-07 18:06:11,445 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=66.1 pTM=0.625 ipTM=0.223 tol=3.54
2024-12-07 18:07:19,283 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=66.1 pTM=0.625 ipTM=0.225 tol=4.4
2024-12-07 18:08:27,117 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=66.1 pTM=0.624 ipTM=0.222 tol=4.62
2024-12-07 18:09:35,000 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.9 pTM=0.626 ipTM=0.224 tol=4.87
2024-12-07 18:10:42,846 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.7 pTM=0.627 ipTM=0.216 tol=4.78
2024-12-07 18:11:50,655 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.6 pTM=0.629 ipTM=0.227 tol=2.75
2024-12-07 18:12:58,410 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65.6 pTM=0.63 ipTM=0.26 tol=2.7
2024-12-07 18:14:06,207 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.6 pTM=0.632 ipTM=0.26 tol=5.14
2024-12-07 18:15:13,930 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=65.6 pTM=0.627 ipTM=0.21 tol=3.91
2024-12-07 18:16:21,694 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.6 pTM=0.628 ipTM=0.216 tol=3.41
2024-12-07 18:17:29,502 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.7 pTM=0.628 ipTM=0.211 tol=2.2
2024-12-07 18:18:37,271 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=65.8 pTM=0.629 ipTM=0.217 tol=2.41
2024-12-07 18:19:45,043 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.6 pTM=0.631 ipTM=0.222 tol=2.19
2024-12-07 18:20:52,830 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.9 pTM=0.629 ipTM=0.22 tol=3.13
2024-12-07 18:22:00,605 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65.9 pTM=0.627 ipTM=0.217 tol=4
2024-12-07 18:23:08,390 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.9 pTM=0.629 ipTM=0.222 tol=4.42
2024-12-07 18:23:08,391 alphafold2_multimer_v3_model_5_seed_000 took 2102.6s (30 recycles)
2024-12-07 18:23:09,723 reranking models by 'multimer' metric
2024-12-07 18:23:13,434 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 18:26:14,025 Relaxation took 184.3s
2024-12-07 18:26:14,025 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.8 pTM=0.653 ipTM=0.612
2024-12-07 18:29:35,172 Relaxation took 201.1s
2024-12-07 18:29:35,172 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=66.4 pTM=0.624 ipTM=0.575
2024-12-07 18:32:45,390 Relaxation took 190.2s
2024-12-07 18:32:45,390 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67 pTM=0.629 ipTM=0.243
2024-12-07 18:36:06,738 Relaxation took 201.3s
2024-12-07 18:36:06,739 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.9 pTM=0.629 ipTM=0.222
2024-12-07 18:39:05,461 Relaxation took 178.7s
2024-12-07 18:39:05,462 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=65 pTM=0.621 ipTM=0.197
2024-12-07 18:39:08,833 Done