2024-12-07 15:21:26,523 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 15:21:26,845 Running on GPU
2024-12-07 15:21:29,584 Found 6 citations for tools or databases
2024-12-07 15:21:29,584 Query 1/1: RAD18_PLCD3 (length 1284)
2024-12-07 15:21:29,882 Sleeping for 5s. Reason: PENDING
2024-12-07 15:21:35,131 Sleeping for 5s. Reason: RUNNING
2024-12-07 15:21:40,382 Sleeping for 5s. Reason: RUNNING
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2024-12-07 15:24:07,314 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:24:13,569 Sleeping for 9s. Reason: RUNNING
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2024-12-07 15:24:31,086 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:24:37,343 Sleeping for 5s. Reason: RUNNING
2024-12-07 15:24:42,599 Sleeping for 7s. Reason: RUNNING
2024-12-07 15:24:49,863 Sleeping for 9s. Reason: RUNNING
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2024-12-07 15:25:07,373 Sleeping for 5s. Reason: RUNNING
2024-12-07 15:25:12,632 Sleeping for 7s. Reason: RUNNING
2024-12-07 15:25:19,890 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:25:29,148 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:25:37,396 Sleeping for 5s. Reason: PENDING
2024-12-07 15:25:42,652 Sleeping for 10s. Reason: RUNNING
2024-12-07 15:25:52,907 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:26:02,179 Sleeping for 5s. Reason: RUNNING
2024-12-07 15:26:07,431 Sleeping for 7s. Reason: RUNNING
2024-12-07 15:26:14,698 Sleeping for 7s. Reason: RUNNING
2024-12-07 15:26:21,953 Sleeping for 7s. Reason: RUNNING
2024-12-07 15:26:29,212 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:26:38,475 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:26:44,736 Sleeping for 10s. Reason: RUNNING
2024-12-07 15:26:54,994 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:27:04,250 Sleeping for 7s. Reason: RUNNING
2024-12-07 15:27:11,509 Sleeping for 10s. Reason: RUNNING
2024-12-07 15:27:21,769 Sleeping for 7s. Reason: RUNNING
2024-12-07 15:27:29,024 Sleeping for 8s. Reason: RUNNING
2024-12-07 15:27:37,277 Sleeping for 7s. Reason: RUNNING
2024-12-07 15:27:44,531 Sleeping for 7s. Reason: RUNNING
2024-12-07 15:27:56,926 Setting max_seq=508, max_extra_seq=2048
2024-12-07 15:30:46,545 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=65 pTM=0.596 ipTM=0.188
2024-12-07 15:31:28,648 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=65.4 pTM=0.598 ipTM=0.219 tol=8.77
2024-12-07 15:32:10,930 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=65.2 pTM=0.588 ipTM=0.188 tol=4.58
2024-12-07 15:32:53,312 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.8 pTM=0.584 ipTM=0.225 tol=5.11
2024-12-07 15:33:35,788 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.8 pTM=0.583 ipTM=0.259 tol=2.71
2024-12-07 15:34:18,269 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.4 pTM=0.58 ipTM=0.26 tol=2.02
2024-12-07 15:35:00,794 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64.5 pTM=0.577 ipTM=0.239 tol=1.63
2024-12-07 15:35:43,390 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64 pTM=0.57 ipTM=0.23 tol=1.5
2024-12-07 15:36:26,033 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.2 pTM=0.572 ipTM=0.221 tol=1.79
2024-12-07 15:37:08,619 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64 pTM=0.57 ipTM=0.222 tol=2.04
2024-12-07 15:37:51,172 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=63.9 pTM=0.567 ipTM=0.221 tol=2.47
2024-12-07 15:38:33,701 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63.9 pTM=0.568 ipTM=0.223 tol=3.55
2024-12-07 15:39:16,230 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=63.9 pTM=0.566 ipTM=0.207 tol=3.91
2024-12-07 15:39:58,766 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64 pTM=0.567 ipTM=0.226 tol=6.22
2024-12-07 15:40:41,255 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=63.8 pTM=0.565 ipTM=0.233 tol=5.19
2024-12-07 15:41:23,701 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=63.9 pTM=0.567 ipTM=0.236 tol=3.32
2024-12-07 15:42:06,159 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.1 pTM=0.566 ipTM=0.219 tol=2.82
2024-12-07 15:42:48,663 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.1 pTM=0.567 ipTM=0.229 tol=2.17
2024-12-07 15:43:31,190 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.1 pTM=0.567 ipTM=0.232 tol=2.14
2024-12-07 15:44:13,701 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64 pTM=0.566 ipTM=0.242 tol=2.36
2024-12-07 15:44:56,196 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=63.9 pTM=0.563 ipTM=0.232 tol=2.34
2024-12-07 15:45:38,707 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64 pTM=0.567 ipTM=0.233 tol=1.97
2024-12-07 15:46:21,232 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=63.8 pTM=0.562 ipTM=0.219 tol=2.34
2024-12-07 15:47:03,784 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=64.2 pTM=0.567 ipTM=0.23 tol=2.7
2024-12-07 15:47:46,348 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64 pTM=0.565 ipTM=0.233 tol=2.51
2024-12-07 15:48:28,931 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64 pTM=0.566 ipTM=0.24 tol=2.68
2024-12-07 15:49:11,503 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.1 pTM=0.562 ipTM=0.223 tol=5.52
2024-12-07 15:49:54,095 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=63.9 pTM=0.564 ipTM=0.215 tol=5.92
2024-12-07 15:50:36,607 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.1 pTM=0.564 ipTM=0.225 tol=4.47
2024-12-07 15:51:19,097 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63.9 pTM=0.565 ipTM=0.218 tol=4.44
2024-12-07 15:52:01,580 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=63.9 pTM=0.563 ipTM=0.23 tol=5.25
2024-12-07 15:52:01,581 alphafold2_multimer_v3_model_1_seed_000 took 1439.9s (30 recycles)
2024-12-07 15:52:45,101 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64.9 pTM=0.608 ipTM=0.238
2024-12-07 15:53:27,726 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66.1 pTM=0.596 ipTM=0.223 tol=12.7
2024-12-07 15:54:10,420 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.7 pTM=0.597 ipTM=0.204 tol=11
2024-12-07 15:54:53,097 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.7 pTM=0.591 ipTM=0.179 tol=6.54
2024-12-07 15:55:35,768 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67 pTM=0.591 ipTM=0.248 tol=4.57
2024-12-07 15:56:18,445 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.1 pTM=0.593 ipTM=0.259 tol=3.11
2024-12-07 15:57:01,128 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67.1 pTM=0.592 ipTM=0.262 tol=2.24
2024-12-07 15:57:43,760 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=66.9 pTM=0.591 ipTM=0.259 tol=2.7
2024-12-07 15:58:26,415 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66.8 pTM=0.592 ipTM=0.265 tol=2.78
2024-12-07 15:59:09,101 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=66.9 pTM=0.592 ipTM=0.252 tol=3.72
2024-12-07 15:59:51,784 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66.8 pTM=0.592 ipTM=0.252 tol=3.48
2024-12-07 16:00:34,447 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=66.8 pTM=0.591 ipTM=0.252 tol=3.05
2024-12-07 16:01:17,070 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.8 pTM=0.593 ipTM=0.286 tol=2.26
2024-12-07 16:01:59,690 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66.9 pTM=0.594 ipTM=0.263 tol=2.57
2024-12-07 16:02:42,280 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.9 pTM=0.595 ipTM=0.276 tol=2.28
2024-12-07 16:03:24,889 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.9 pTM=0.594 ipTM=0.271 tol=3.19
2024-12-07 16:04:07,513 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=67.1 pTM=0.593 ipTM=0.251 tol=2.64
2024-12-07 16:04:50,130 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.3 pTM=0.595 ipTM=0.236 tol=3.62
2024-12-07 16:05:32,699 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=66.9 pTM=0.592 ipTM=0.245 tol=2.17
2024-12-07 16:06:15,336 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66.9 pTM=0.593 ipTM=0.251 tol=2.43
2024-12-07 16:06:57,998 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=67.2 pTM=0.594 ipTM=0.27 tol=2.19
2024-12-07 16:07:40,639 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=67.1 pTM=0.594 ipTM=0.244 tol=1.3
2024-12-07 16:08:23,274 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=66.9 pTM=0.593 ipTM=0.244 tol=1.32
2024-12-07 16:09:05,950 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.1 pTM=0.595 ipTM=0.268 tol=1.18
2024-12-07 16:09:48,632 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=66.9 pTM=0.593 ipTM=0.264 tol=0.936
2024-12-07 16:10:31,315 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67 pTM=0.593 ipTM=0.26 tol=0.967
2024-12-07 16:11:13,951 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66.8 pTM=0.589 ipTM=0.258 tol=1.15
2024-12-07 16:11:56,598 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=66.9 pTM=0.591 ipTM=0.238 tol=1.05
2024-12-07 16:12:39,231 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=66.8 pTM=0.591 ipTM=0.252 tol=2.28
2024-12-07 16:13:21,855 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=67 pTM=0.59 ipTM=0.236 tol=2.39
2024-12-07 16:14:04,481 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=66.9 pTM=0.592 ipTM=0.246 tol=1.95
2024-12-07 16:14:04,482 alphafold2_multimer_v3_model_2_seed_000 took 1321.9s (30 recycles)
2024-12-07 16:14:48,141 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=65.2 pTM=0.587 ipTM=0.18
2024-12-07 16:15:30,796 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=65.4 pTM=0.598 ipTM=0.191 tol=14.1
2024-12-07 16:16:13,495 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=65.8 pTM=0.597 ipTM=0.184 tol=6.58
2024-12-07 16:16:56,225 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=65.9 pTM=0.599 ipTM=0.213 tol=5.71
2024-12-07 16:17:38,937 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.1 pTM=0.597 ipTM=0.199 tol=2.08
2024-12-07 16:18:21,768 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=65.9 pTM=0.599 ipTM=0.184 tol=4.57
2024-12-07 16:19:04,471 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=66.1 pTM=0.599 ipTM=0.199 tol=3.18
2024-12-07 16:19:47,227 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=65.9 pTM=0.6 ipTM=0.202 tol=4.48
2024-12-07 16:20:29,987 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=65.9 pTM=0.598 ipTM=0.203 tol=4.18
2024-12-07 16:21:12,834 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.6 pTM=0.599 ipTM=0.186 tol=14
2024-12-07 16:21:55,669 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=65.4 pTM=0.598 ipTM=0.194 tol=14.3
2024-12-07 16:22:38,539 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=65.6 pTM=0.596 ipTM=0.186 tol=7.93
2024-12-07 16:23:21,325 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=65.6 pTM=0.598 ipTM=0.195 tol=5.85
2024-12-07 16:24:04,152 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=65.9 pTM=0.598 ipTM=0.184 tol=6.52
2024-12-07 16:24:46,915 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=65.8 pTM=0.598 ipTM=0.193 tol=6.2
2024-12-07 16:25:29,712 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=65.6 pTM=0.595 ipTM=0.18 tol=5.66
2024-12-07 16:26:12,462 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.9 pTM=0.6 ipTM=0.206 tol=5.17
2024-12-07 16:26:55,259 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.7 pTM=0.596 ipTM=0.187 tol=7.64
2024-12-07 16:27:37,996 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.9 pTM=0.599 ipTM=0.191 tol=6.18
2024-12-07 16:28:20,839 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.8 pTM=0.597 ipTM=0.172 tol=6.92
2024-12-07 16:29:03,593 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.8 pTM=0.598 ipTM=0.183 tol=7.96
2024-12-07 16:29:46,388 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=65.5 pTM=0.602 ipTM=0.197 tol=16.2
2024-12-07 16:30:29,186 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=64.9 pTM=0.596 ipTM=0.18 tol=17.4
2024-12-07 16:31:11,965 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=65.7 pTM=0.598 ipTM=0.188 tol=6.69
2024-12-07 16:31:54,824 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.5 pTM=0.597 ipTM=0.178 tol=6.41
2024-12-07 16:32:37,629 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65.6 pTM=0.598 ipTM=0.197 tol=6.91
2024-12-07 16:33:20,456 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.2 pTM=0.596 ipTM=0.177 tol=16.4
2024-12-07 16:34:03,297 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=65.2 pTM=0.595 ipTM=0.172 tol=7.48
2024-12-07 16:34:46,121 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=65.1 pTM=0.594 ipTM=0.174 tol=4.06
2024-12-07 16:35:28,927 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=65.2 pTM=0.596 ipTM=0.173 tol=4.04
2024-12-07 16:36:11,721 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=65.3 pTM=0.598 ipTM=0.18 tol=7.3
2024-12-07 16:36:11,722 alphafold2_multimer_v3_model_3_seed_000 took 1326.2s (30 recycles)
2024-12-07 16:36:55,308 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.4 pTM=0.611 ipTM=0.281
2024-12-07 16:37:37,993 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.4 pTM=0.592 ipTM=0.224 tol=8.85
2024-12-07 16:38:20,737 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=64.2 pTM=0.589 ipTM=0.203 tol=7.13
2024-12-07 16:39:03,478 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.1 pTM=0.583 ipTM=0.189 tol=6.91
2024-12-07 16:39:46,144 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=63.8 pTM=0.583 ipTM=0.199 tol=7.43
2024-12-07 16:40:28,797 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.2 pTM=0.581 ipTM=0.192 tol=5.74
2024-12-07 16:41:11,501 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.1 pTM=0.581 ipTM=0.194 tol=6.19
2024-12-07 16:41:54,157 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64 pTM=0.576 ipTM=0.188 tol=6.64
2024-12-07 16:42:36,780 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=63.8 pTM=0.579 ipTM=0.193 tol=5.85
2024-12-07 16:43:19,372 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64.1 pTM=0.575 ipTM=0.183 tol=6.11
2024-12-07 16:44:01,991 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=63.7 pTM=0.571 ipTM=0.189 tol=6.81
2024-12-07 16:44:44,604 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.1 pTM=0.571 ipTM=0.188 tol=6.12
2024-12-07 16:45:27,271 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=63.6 pTM=0.571 ipTM=0.189 tol=5.78
2024-12-07 16:46:09,945 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=63.9 pTM=0.567 ipTM=0.182 tol=6.09
2024-12-07 16:46:52,611 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=63.4 pTM=0.57 ipTM=0.192 tol=5.43
2024-12-07 16:47:35,256 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=63.7 pTM=0.562 ipTM=0.184 tol=4.75
2024-12-07 16:48:17,851 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=63.6 pTM=0.571 ipTM=0.195 tol=4.28
2024-12-07 16:49:00,491 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.4 pTM=0.556 ipTM=0.181 tol=5.55
2024-12-07 16:49:43,133 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63.6 pTM=0.575 ipTM=0.197 tol=5.76
2024-12-07 16:50:25,733 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=63.6 pTM=0.562 ipTM=0.184 tol=5.51
2024-12-07 16:51:08,400 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=63.5 pTM=0.574 ipTM=0.192 tol=6.06
2024-12-07 16:51:51,036 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63.7 pTM=0.564 ipTM=0.179 tol=6.76
2024-12-07 16:52:33,685 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=63.6 pTM=0.575 ipTM=0.19 tol=5.16
2024-12-07 16:53:16,306 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.8 pTM=0.565 ipTM=0.184 tol=4.78
2024-12-07 16:53:58,937 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=63.3 pTM=0.578 ipTM=0.193 tol=5.05
2024-12-07 16:54:41,554 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.4 pTM=0.561 ipTM=0.182 tol=5.68
2024-12-07 16:55:24,218 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=63.6 pTM=0.576 ipTM=0.191 tol=6.42
2024-12-07 16:56:06,838 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63.6 pTM=0.562 ipTM=0.182 tol=6.17
2024-12-07 16:56:49,492 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63.4 pTM=0.576 ipTM=0.195 tol=5.8
2024-12-07 16:57:32,097 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=63.4 pTM=0.56 ipTM=0.183 tol=6.27
2024-12-07 16:58:14,767 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63.3 pTM=0.58 ipTM=0.203 tol=5.65
2024-12-07 16:58:14,768 alphafold2_multimer_v3_model_4_seed_000 took 1322.0s (30 recycles)
2024-12-07 16:58:58,387 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63.8 pTM=0.597 ipTM=0.214
2024-12-07 16:59:40,972 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=63.8 pTM=0.575 ipTM=0.202 tol=6.42
2024-12-07 17:00:23,643 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=64.9 pTM=0.586 ipTM=0.192 tol=3.74
2024-12-07 17:01:06,356 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=64.7 pTM=0.58 ipTM=0.199 tol=2.86
2024-12-07 17:01:49,042 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.2 pTM=0.589 ipTM=0.195 tol=3.76
2024-12-07 17:02:31,709 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=64.8 pTM=0.583 ipTM=0.193 tol=4.11
2024-12-07 17:03:14,410 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.2 pTM=0.59 ipTM=0.184 tol=4.22
2024-12-07 17:03:57,068 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=64.4 pTM=0.587 ipTM=0.18 tol=4.02
2024-12-07 17:04:39,771 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=64.9 pTM=0.591 ipTM=0.177 tol=3.32
2024-12-07 17:05:22,443 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=64.7 pTM=0.588 ipTM=0.176 tol=3.04
2024-12-07 17:06:05,135 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=64.8 pTM=0.586 ipTM=0.191 tol=2.86
2024-12-07 17:06:47,790 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=64.4 pTM=0.584 ipTM=0.172 tol=4.46
2024-12-07 17:07:30,527 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=64.9 pTM=0.588 ipTM=0.178 tol=4.64
2024-12-07 17:08:13,186 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=64.7 pTM=0.589 ipTM=0.177 tol=6.05
2024-12-07 17:08:55,904 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=64.6 pTM=0.587 ipTM=0.181 tol=5.73
2024-12-07 17:09:38,539 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=64.6 pTM=0.585 ipTM=0.179 tol=6.38
2024-12-07 17:10:21,245 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=64.8 pTM=0.586 ipTM=0.184 tol=6.11
2024-12-07 17:11:03,932 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=64.6 pTM=0.586 ipTM=0.181 tol=4.48
2024-12-07 17:11:46,665 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=64.7 pTM=0.588 ipTM=0.177 tol=3.77
2024-12-07 17:12:29,395 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=64.6 pTM=0.59 ipTM=0.178 tol=3.94
2024-12-07 17:13:12,086 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=64.7 pTM=0.589 ipTM=0.19 tol=4.4
2024-12-07 17:13:54,785 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=64.8 pTM=0.59 ipTM=0.175 tol=2.45
2024-12-07 17:14:37,413 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=64.2 pTM=0.586 ipTM=0.204 tol=1.96
2024-12-07 17:15:20,057 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=64.6 pTM=0.588 ipTM=0.203 tol=3.39
2024-12-07 17:16:02,739 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=64.5 pTM=0.587 ipTM=0.206 tol=2.73
2024-12-07 17:16:45,402 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=64.4 pTM=0.587 ipTM=0.198 tol=3.19
2024-12-07 17:17:28,073 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=64.7 pTM=0.59 ipTM=0.218 tol=1.99
2024-12-07 17:18:10,770 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=64.6 pTM=0.587 ipTM=0.203 tol=2.29
2024-12-07 17:18:53,443 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=64.6 pTM=0.588 ipTM=0.206 tol=2.29
2024-12-07 17:19:36,161 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=64.8 pTM=0.588 ipTM=0.195 tol=5.72
2024-12-07 17:20:18,877 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.1 pTM=0.59 ipTM=0.22 tol=5.55
2024-12-07 17:20:18,878 alphafold2_multimer_v3_model_5_seed_000 took 1323.1s (30 recycles)
2024-12-07 17:20:19,872 reranking models by 'multimer' metric
2024-12-07 17:20:22,725 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 17:22:46,870 Relaxation took 147.0s
2024-12-07 17:22:46,870 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=66.9 pTM=0.592 ipTM=0.246
2024-12-07 17:25:16,762 Relaxation took 149.9s
2024-12-07 17:25:16,762 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=63.9 pTM=0.563 ipTM=0.23
2024-12-07 17:27:17,128 Relaxation took 120.4s
2024-12-07 17:27:17,128 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.1 pTM=0.59 ipTM=0.22
2024-12-07 17:30:01,810 Relaxation took 164.7s
2024-12-07 17:30:01,810 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63.3 pTM=0.58 ipTM=0.203
2024-12-07 17:32:36,100 Relaxation took 154.3s
2024-12-07 17:32:36,100 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=65.3 pTM=0.598 ipTM=0.18
2024-12-07 17:32:38,640 Done