2024-12-07 15:38:43,208 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 15:38:43,636 Running on GPU
2024-12-07 15:38:46,559 Found 6 citations for tools or databases
2024-12-07 15:38:46,560 Query 1/1: RASD2_LRP5 (length 1881)
2024-12-07 15:38:46,847 Sleeping for 8s. Reason: PENDING
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2024-12-07 15:42:43,469 Sleeping for 8s. Reason: RUNNING
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2024-12-07 15:44:35,350 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:44:44,620 Sleeping for 5s. Reason: RUNNING
2024-12-07 15:44:53,159 Sleeping for 7s. Reason: PENDING
2024-12-07 15:45:00,418 Sleeping for 7s. Reason: RUNNING
2024-12-07 15:45:07,673 Sleeping for 7s. Reason: RUNNING
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2024-12-07 15:46:45,182 Sleeping for 8s. Reason: RUNNING
2024-12-07 15:46:53,447 Sleeping for 5s. Reason: RUNNING
2024-12-07 15:46:58,705 Sleeping for 5s. Reason: RUNNING
2024-12-07 15:47:03,963 Sleeping for 8s. Reason: RUNNING
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2024-12-07 15:47:19,482 Sleeping for 5s. Reason: RUNNING
2024-12-07 15:47:24,732 Sleeping for 8s. Reason: RUNNING
2024-12-07 15:47:32,999 Sleeping for 9s. Reason: RUNNING
2024-12-07 15:47:42,258 Sleeping for 8s. Reason: RUNNING
2024-12-07 15:47:50,513 Sleeping for 7s. Reason: RUNNING
2024-12-07 15:47:57,770 Sleeping for 6s. Reason: RUNNING
2024-12-07 15:48:04,026 Sleeping for 10s. Reason: RUNNING
2024-12-07 15:48:22,964 Setting max_seq=508, max_extra_seq=2048
2024-12-07 15:53:34,567 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=73.6 pTM=0.521 ipTM=0.352
2024-12-07 15:55:47,567 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=72.6 pTM=0.518 ipTM=0.361 tol=11.2
2024-12-07 15:58:00,665 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=72.7 pTM=0.492 ipTM=0.313 tol=9.57
2024-12-07 16:00:13,742 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=72.6 pTM=0.495 ipTM=0.364 tol=6.61
2024-12-07 16:02:26,808 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=73.1 pTM=0.484 ipTM=0.464 tol=6.97
2024-12-07 16:04:39,812 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72.9 pTM=0.489 ipTM=0.483 tol=5.79
2024-12-07 16:06:52,875 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=73 pTM=0.473 ipTM=0.47 tol=4.1
2024-12-07 16:09:05,930 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=73 pTM=0.487 ipTM=0.464 tol=4.41
2024-12-07 16:11:18,977 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.9 pTM=0.474 ipTM=0.479 tol=3.39
2024-12-07 16:13:31,992 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=72.7 pTM=0.479 ipTM=0.489 tol=4.39
2024-12-07 16:15:45,039 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=72.8 pTM=0.464 ipTM=0.499 tol=2.68
2024-12-07 16:17:58,107 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72.8 pTM=0.469 ipTM=0.464 tol=3.54
2024-12-07 16:20:11,123 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.8 pTM=0.467 ipTM=0.478 tol=3.29
2024-12-07 16:22:24,118 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=72.8 pTM=0.474 ipTM=0.462 tol=2.53
2024-12-07 16:24:37,273 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.5 pTM=0.46 ipTM=0.456 tol=5.38
2024-12-07 16:26:50,442 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72.6 pTM=0.472 ipTM=0.411 tol=7.08
2024-12-07 16:29:03,592 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=73.1 pTM=0.465 ipTM=0.515 tol=6.31
2024-12-07 16:31:16,669 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=72.8 pTM=0.466 ipTM=0.484 tol=4.59
2024-12-07 16:33:29,716 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.8 pTM=0.466 ipTM=0.484 tol=1.87
2024-12-07 16:35:42,808 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=72.5 pTM=0.466 ipTM=0.463 tol=4.25
2024-12-07 16:37:55,918 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=72.8 pTM=0.467 ipTM=0.474 tol=4.54
2024-12-07 16:40:09,053 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=72.7 pTM=0.473 ipTM=0.457 tol=2.82
2024-12-07 16:42:22,212 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=72.8 pTM=0.462 ipTM=0.502 tol=2.55
2024-12-07 16:44:35,301 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=72.8 pTM=0.473 ipTM=0.493 tol=2.26
2024-12-07 16:46:48,427 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=72.9 pTM=0.466 ipTM=0.542 tol=5.55
2024-12-07 16:49:01,543 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=72.6 pTM=0.474 ipTM=0.49 tol=1.12
2024-12-07 16:51:14,618 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=72.5 pTM=0.462 ipTM=0.467 tol=4.87
2024-12-07 16:53:27,711 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=72.5 pTM=0.466 ipTM=0.414 tol=4.91
2024-12-07 16:55:40,796 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.4 pTM=0.459 ipTM=0.486 tol=4.29
2024-12-07 16:57:53,858 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72.9 pTM=0.465 ipTM=0.499 tol=7.27
2024-12-07 17:00:06,903 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.7 pTM=0.461 ipTM=0.511 tol=4.05
2024-12-07 17:00:06,905 alphafold2_multimer_v3_model_1_seed_000 took 4299.3s (30 recycles)
2024-12-07 17:02:22,092 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=72.5 pTM=0.55 ipTM=0.355
2024-12-07 17:04:35,256 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=72.2 pTM=0.514 ipTM=0.374 tol=9.95
2024-12-07 17:06:48,474 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=73 pTM=0.512 ipTM=0.396 tol=8.09
2024-12-07 17:09:01,756 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=72.7 pTM=0.5 ipTM=0.323 tol=5.7
2024-12-07 17:11:15,046 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=72.7 pTM=0.51 ipTM=0.343 tol=4.54
2024-12-07 17:13:28,371 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=72.9 pTM=0.501 ipTM=0.369 tol=5.82
2024-12-07 17:15:41,710 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=72.9 pTM=0.501 ipTM=0.335 tol=3.77
2024-12-07 17:17:55,037 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=73.1 pTM=0.5 ipTM=0.347 tol=5.04
2024-12-07 17:20:08,327 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=73 pTM=0.5 ipTM=0.37 tol=3.09
2024-12-07 17:22:21,621 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=73 pTM=0.498 ipTM=0.334 tol=3.49
2024-12-07 17:24:34,910 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=72.9 pTM=0.494 ipTM=0.339 tol=3.82
2024-12-07 17:26:48,146 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=73.2 pTM=0.505 ipTM=0.385 tol=4.56
2024-12-07 17:29:01,380 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=72.9 pTM=0.494 ipTM=0.332 tol=4.69
2024-12-07 17:31:14,627 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=72.7 pTM=0.497 ipTM=0.328 tol=4.91
2024-12-07 17:33:27,834 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=72.8 pTM=0.49 ipTM=0.343 tol=1.71
2024-12-07 17:35:41,026 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=73.1 pTM=0.495 ipTM=0.359 tol=1.74
2024-12-07 17:37:54,230 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=73.2 pTM=0.494 ipTM=0.354 tol=1.76
2024-12-07 17:40:07,490 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=73.1 pTM=0.493 ipTM=0.347 tol=2.61
2024-12-07 17:42:20,714 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=73 pTM=0.5 ipTM=0.36 tol=4.93
2024-12-07 17:44:33,908 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=72.8 pTM=0.491 ipTM=0.345 tol=2.04
2024-12-07 17:46:47,164 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=72.8 pTM=0.491 ipTM=0.344 tol=2.67
2024-12-07 17:49:00,392 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=72.9 pTM=0.491 ipTM=0.351 tol=3.72
2024-12-07 17:51:13,558 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=72.8 pTM=0.487 ipTM=0.368 tol=1.93
2024-12-07 17:53:26,701 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=72.8 pTM=0.493 ipTM=0.344 tol=1.96
2024-12-07 17:55:39,852 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=72.8 pTM=0.491 ipTM=0.353 tol=2.05
2024-12-07 17:57:53,001 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=72.9 pTM=0.499 ipTM=0.364 tol=1.98
2024-12-07 18:00:06,167 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=72.8 pTM=0.491 ipTM=0.35 tol=3.49
2024-12-07 18:02:19,410 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=72.8 pTM=0.491 ipTM=0.333 tol=3.06
2024-12-07 18:04:32,570 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=72.7 pTM=0.49 ipTM=0.368 tol=3.14
2024-12-07 18:06:45,780 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=73.1 pTM=0.497 ipTM=0.349 tol=4.32
2024-12-07 18:08:58,957 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=72.6 pTM=0.494 ipTM=0.325 tol=2.13
2024-12-07 18:08:58,959 alphafold2_multimer_v3_model_2_seed_000 took 4130.0s (30 recycles)
2024-12-07 18:11:14,232 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=72.2 pTM=0.521 ipTM=0.321
2024-12-07 18:13:27,555 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=71.8 pTM=0.482 ipTM=0.304 tol=9.36
2024-12-07 18:15:40,860 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=71.9 pTM=0.478 ipTM=0.306 tol=5.68
2024-12-07 18:17:54,193 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=71.8 pTM=0.469 ipTM=0.293 tol=5.92
2024-12-07 18:20:07,492 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=71.8 pTM=0.47 ipTM=0.292 tol=5.04
2024-12-07 18:22:20,832 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=71.9 pTM=0.468 ipTM=0.301 tol=3.56
2024-12-07 18:24:34,153 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=72.2 pTM=0.476 ipTM=0.298 tol=2.71
2024-12-07 18:26:47,447 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=72.4 pTM=0.466 ipTM=0.307 tol=3.25
2024-12-07 18:29:00,702 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=72.2 pTM=0.472 ipTM=0.301 tol=3.24
2024-12-07 18:31:13,975 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=72 pTM=0.458 ipTM=0.299 tol=2.73
2024-12-07 18:33:27,278 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.9 pTM=0.471 ipTM=0.297 tol=2.04
2024-12-07 18:35:40,581 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=72.1 pTM=0.464 ipTM=0.305 tol=3.22
2024-12-07 18:37:53,823 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71.9 pTM=0.472 ipTM=0.301 tol=2.85
2024-12-07 18:40:07,065 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=72 pTM=0.463 ipTM=0.302 tol=2.07
2024-12-07 18:42:20,375 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=72 pTM=0.471 ipTM=0.297 tol=3.76
2024-12-07 18:44:33,607 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=72.2 pTM=0.462 ipTM=0.299 tol=2.92
2024-12-07 18:46:46,857 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=72.4 pTM=0.472 ipTM=0.298 tol=2.77
2024-12-07 18:49:00,144 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=72.6 pTM=0.464 ipTM=0.305 tol=3.32
2024-12-07 18:51:13,400 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=72.4 pTM=0.476 ipTM=0.302 tol=3.28
2024-12-07 18:53:26,609 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=72.1 pTM=0.459 ipTM=0.298 tol=3.71
2024-12-07 18:55:39,833 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=72.2 pTM=0.477 ipTM=0.304 tol=4.08
2024-12-07 18:57:53,033 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=72.2 pTM=0.463 ipTM=0.307 tol=3.53
2024-12-07 19:00:06,335 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=72.1 pTM=0.472 ipTM=0.293 tol=3.58
2024-12-07 19:02:19,596 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=72.1 pTM=0.456 ipTM=0.301 tol=2.94
2024-12-07 19:04:32,806 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=72.1 pTM=0.473 ipTM=0.304 tol=2.97
2024-12-07 19:06:46,068 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=72.2 pTM=0.463 ipTM=0.303 tol=7.36
2024-12-07 19:08:59,316 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=72.1 pTM=0.475 ipTM=0.305 tol=6.04
2024-12-07 19:11:12,543 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=72.1 pTM=0.461 ipTM=0.305 tol=4.01
2024-12-07 19:13:25,762 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=72 pTM=0.474 ipTM=0.3 tol=5.8
2024-12-07 19:15:39,071 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=72.2 pTM=0.461 ipTM=0.304 tol=3.86
2024-12-07 19:17:52,317 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=72 pTM=0.474 ipTM=0.308 tol=4.89
2024-12-07 19:17:52,319 alphafold2_multimer_v3_model_3_seed_000 took 4131.3s (30 recycles)
2024-12-07 19:20:07,415 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=69.5 pTM=0.517 ipTM=0.314
2024-12-07 19:22:20,504 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=69.5 pTM=0.496 ipTM=0.34 tol=10.5
2024-12-07 19:24:33,678 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=70.6 pTM=0.486 ipTM=0.356 tol=8.34
2024-12-07 19:26:46,810 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=70.9 pTM=0.499 ipTM=0.383 tol=5.59
2024-12-07 19:28:59,940 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=71 pTM=0.484 ipTM=0.329 tol=7.17
2024-12-07 19:31:13,019 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.5 pTM=0.49 ipTM=0.339 tol=4.88
2024-12-07 19:33:26,114 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71.1 pTM=0.483 ipTM=0.357 tol=2.83
2024-12-07 19:35:39,261 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=71.5 pTM=0.497 ipTM=0.348 tol=4.42
2024-12-07 19:37:52,400 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71.2 pTM=0.484 ipTM=0.327 tol=3.17
2024-12-07 19:40:05,604 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.6 pTM=0.488 ipTM=0.314 tol=6.21
2024-12-07 19:42:18,734 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=70.7 pTM=0.481 ipTM=0.325 tol=3.8
2024-12-07 19:44:31,865 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=71 pTM=0.485 ipTM=0.313 tol=3.11
2024-12-07 19:46:44,937 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.7 pTM=0.478 ipTM=0.318 tol=4.52
2024-12-07 19:48:57,994 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.9 pTM=0.488 ipTM=0.328 tol=4.99
2024-12-07 19:51:11,186 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.6 pTM=0.479 ipTM=0.321 tol=4.96
2024-12-07 19:53:24,343 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.8 pTM=0.484 ipTM=0.311 tol=5.75
2024-12-07 19:55:37,446 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.9 pTM=0.478 ipTM=0.325 tol=4.33
2024-12-07 19:57:50,564 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.6 pTM=0.485 ipTM=0.336 tol=5.83
2024-12-07 20:00:03,654 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=71.2 pTM=0.487 ipTM=0.367 tol=4.59
2024-12-07 20:02:16,738 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.9 pTM=0.48 ipTM=0.337 tol=2.77
2024-12-07 20:04:29,816 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.7 pTM=0.482 ipTM=0.32 tol=5.05
2024-12-07 20:06:42,838 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=71 pTM=0.488 ipTM=0.369 tol=4.48
2024-12-07 20:08:55,893 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=71.2 pTM=0.482 ipTM=0.381 tol=5.19
2024-12-07 20:11:08,973 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.9 pTM=0.487 ipTM=0.386 tol=4.86
2024-12-07 20:13:21,965 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=71.1 pTM=0.485 ipTM=0.412 tol=4.04
2024-12-07 20:15:35,100 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.6 pTM=0.48 ipTM=0.336 tol=4.18
2024-12-07 20:17:48,299 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.6 pTM=0.483 ipTM=0.326 tol=3.46
2024-12-07 20:20:01,479 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.6 pTM=0.479 ipTM=0.327 tol=2.76
2024-12-07 20:22:14,561 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=71 pTM=0.48 ipTM=0.373 tol=3.79
2024-12-07 20:24:27,681 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=71.1 pTM=0.48 ipTM=0.31 tol=3.42
2024-12-07 20:26:40,751 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.7 pTM=0.476 ipTM=0.321 tol=3.53
2024-12-07 20:26:40,754 alphafold2_multimer_v3_model_4_seed_000 took 4126.4s (30 recycles)
2024-12-07 20:28:55,966 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=71.1 pTM=0.497 ipTM=0.282
2024-12-07 20:31:09,124 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=70.1 pTM=0.485 ipTM=0.29 tol=9.24
2024-12-07 20:33:22,271 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=70.9 pTM=0.479 ipTM=0.309 tol=8.24
2024-12-07 20:35:35,439 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=71.1 pTM=0.486 ipTM=0.307 tol=4.78
2024-12-07 20:37:48,546 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=71.2 pTM=0.483 ipTM=0.3 tol=5.22
2024-12-07 20:40:01,679 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=71.2 pTM=0.496 ipTM=0.303 tol=5.66
2024-12-07 20:42:14,851 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=71.4 pTM=0.493 ipTM=0.3 tol=5.56
2024-12-07 20:44:28,111 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=71.8 pTM=0.495 ipTM=0.293 tol=5.94
2024-12-07 20:46:41,289 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=71.6 pTM=0.493 ipTM=0.301 tol=3.72
2024-12-07 20:48:54,365 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=71.2 pTM=0.496 ipTM=0.296 tol=3.3
2024-12-07 20:51:07,489 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=71.3 pTM=0.488 ipTM=0.291 tol=4.04
2024-12-07 20:53:20,590 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=71.6 pTM=0.503 ipTM=0.318 tol=3.85
2024-12-07 20:55:33,807 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=71.3 pTM=0.487 ipTM=0.295 tol=5.37
2024-12-07 20:57:46,943 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=71.4 pTM=0.499 ipTM=0.312 tol=2.57
2024-12-07 21:00:00,042 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=71.2 pTM=0.491 ipTM=0.303 tol=1.49
2024-12-07 21:02:13,155 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=71.2 pTM=0.49 ipTM=0.299 tol=5.08
2024-12-07 21:04:26,323 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=71.6 pTM=0.491 ipTM=0.306 tol=3.99
2024-12-07 21:06:39,464 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=71.8 pTM=0.493 ipTM=0.308 tol=2.59
2024-12-07 21:08:52,634 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=71.6 pTM=0.495 ipTM=0.296 tol=1.85
2024-12-07 21:11:05,822 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=71.4 pTM=0.487 ipTM=0.307 tol=1.86
2024-12-07 21:13:19,011 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=71.6 pTM=0.492 ipTM=0.294 tol=2.56
2024-12-07 21:15:32,175 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=71.5 pTM=0.495 ipTM=0.303 tol=4.92
2024-12-07 21:17:45,299 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=71.3 pTM=0.491 ipTM=0.303 tol=5.04
2024-12-07 21:19:58,438 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=71.2 pTM=0.489 ipTM=0.307 tol=2.63
2024-12-07 21:22:11,592 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=71.2 pTM=0.493 ipTM=0.313 tol=1.73
2024-12-07 21:24:24,783 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=71.2 pTM=0.494 ipTM=0.299 tol=3.25
2024-12-07 21:26:37,882 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=71.2 pTM=0.5 ipTM=0.326 tol=4.78
2024-12-07 21:28:51,004 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=71.3 pTM=0.491 ipTM=0.303 tol=4.93
2024-12-07 21:31:04,196 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=71.2 pTM=0.489 ipTM=0.308 tol=2.9
2024-12-07 21:33:17,474 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=71.2 pTM=0.487 ipTM=0.293 tol=5.94
2024-12-07 21:35:30,689 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=71 pTM=0.492 ipTM=0.311 tol=5.33
2024-12-07 21:35:30,691 alphafold2_multimer_v3_model_5_seed_000 took 4127.9s (30 recycles)
2024-12-07 21:35:32,742 reranking models by 'multimer' metric
2024-12-07 21:35:36,419 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 21:39:34,465 Relaxation took 241.7s
2024-12-07 21:39:34,466 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.7 pTM=0.461 ipTM=0.511
2024-12-07 21:45:32,742 Relaxation took 358.3s
2024-12-07 21:45:32,742 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=72.6 pTM=0.494 ipTM=0.325
2024-12-07 21:48:50,563 Relaxation took 197.8s
2024-12-07 21:48:50,563 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.7 pTM=0.476 ipTM=0.321
2024-12-07 21:52:04,369 Relaxation took 193.8s
2024-12-07 21:52:04,369 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=71 pTM=0.492 ipTM=0.311
2024-12-07 21:55:07,390 Relaxation took 183.0s
2024-12-07 21:55:07,391 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=72 pTM=0.474 ipTM=0.308
2024-12-07 21:55:12,247 Done