2024-12-07 16:09:04,574 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-07 16:09:04,876 Running on GPU 2024-12-07 16:09:08,040 Found 6 citations for tools or databases 2024-12-07 16:09:08,040 Query 1/1: RBBP4_ING2 (length 705) 2024-12-07 16:09:08,318 Sleeping for 6s. Reason: PENDING 2024-12-07 16:09:14,571 Sleeping for 8s. Reason: RUNNING 2024-12-07 16:09:22,836 Sleeping for 6s. Reason: RUNNING 2024-12-07 16:09:29,089 Sleeping for 7s. Reason: RUNNING 2024-12-07 16:09:36,344 Sleeping for 9s. Reason: RUNNING 2024-12-07 16:09:45,602 Sleeping for 10s. Reason: RUNNING 2024-12-07 16:09:55,859 Sleeping for 8s. Reason: RUNNING 2024-12-07 16:10:04,121 Sleeping for 7s. Reason: RUNNING 2024-12-07 16:10:11,384 Sleeping for 8s. Reason: RUNNING 2024-12-07 16:10:19,658 Sleeping for 9s. Reason: RUNNING 2024-12-07 16:10:28,927 Sleeping for 6s. Reason: RUNNING 2024-12-07 16:10:35,188 Sleeping for 5s. Reason: RUNNING 2024-12-07 16:10:40,443 Sleeping for 8s. Reason: RUNNING 2024-12-07 16:10:48,706 Sleeping for 8s. Reason: RUNNING 2024-12-07 16:10:56,969 Sleeping for 9s. Reason: RUNNING 2024-12-07 16:11:06,224 Sleeping for 7s. Reason: RUNNING 2024-12-07 16:11:13,476 Sleeping for 6s. Reason: RUNNING 2024-12-07 16:11:19,729 Sleeping for 10s. Reason: RUNNING 2024-12-07 16:11:29,991 Sleeping for 7s. Reason: RUNNING 2024-12-07 16:11:39,052 Sleeping for 9s. Reason: PENDING 2024-12-07 16:11:48,311 Sleeping for 10s. Reason: RUNNING 2024-12-07 16:11:58,587 Sleeping for 6s. Reason: RUNNING 2024-12-07 16:12:04,838 Sleeping for 6s. Reason: RUNNING 2024-12-07 16:12:11,089 Sleeping for 8s. Reason: RUNNING 2024-12-07 16:12:19,352 Sleeping for 5s. Reason: RUNNING 2024-12-07 16:12:24,604 Sleeping for 7s. Reason: RUNNING 2024-12-07 16:12:31,871 Sleeping for 9s. Reason: RUNNING 2024-12-07 16:12:41,129 Sleeping for 10s. Reason: RUNNING 2024-12-07 16:12:53,815 Setting max_seq=508, max_extra_seq=2048 2024-12-07 16:15:49,748 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=69.1 pTM=0.621 ipTM=0.224 2024-12-07 16:15:59,865 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=68.6 pTM=0.613 ipTM=0.294 tol=5.5 2024-12-07 16:16:10,013 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=69.2 pTM=0.605 ipTM=0.234 tol=2.63 2024-12-07 16:16:20,162 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=69.2 pTM=0.607 ipTM=0.237 tol=1.92 2024-12-07 16:16:30,330 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=69.8 pTM=0.606 ipTM=0.282 tol=2.26 2024-12-07 16:16:40,508 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=69.4 pTM=0.607 ipTM=0.32 tol=3.03 2024-12-07 16:16:50,682 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=69.2 pTM=0.605 ipTM=0.286 tol=2.33 2024-12-07 16:17:00,874 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=69.3 pTM=0.607 ipTM=0.284 tol=1.23 2024-12-07 16:17:11,077 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=69.2 pTM=0.605 ipTM=0.301 tol=1.56 2024-12-07 16:17:21,285 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=69.2 pTM=0.611 ipTM=0.332 tol=1.65 2024-12-07 16:17:31,494 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=69.4 pTM=0.606 ipTM=0.281 tol=1.59 2024-12-07 16:17:41,709 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=69.2 pTM=0.608 ipTM=0.272 tol=3.56 2024-12-07 16:17:51,922 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=69.6 pTM=0.605 ipTM=0.289 tol=3.14 2024-12-07 16:18:02,143 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=69.3 pTM=0.611 ipTM=0.335 tol=1.18 2024-12-07 16:18:12,364 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=69.4 pTM=0.605 ipTM=0.281 tol=1.15 2024-12-07 16:18:22,583 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=69.4 pTM=0.608 ipTM=0.264 tol=1.26 2024-12-07 16:18:32,809 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=69.3 pTM=0.607 ipTM=0.324 tol=0.926 2024-12-07 16:18:43,038 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=69.4 pTM=0.611 ipTM=0.325 tol=0.869 2024-12-07 16:18:53,268 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=69.4 pTM=0.604 ipTM=0.308 tol=1.11 2024-12-07 16:19:03,495 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=69.2 pTM=0.61 ipTM=0.32 tol=0.806 2024-12-07 16:19:13,727 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=69.5 pTM=0.606 ipTM=0.302 tol=1.15 2024-12-07 16:19:23,954 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=69.3 pTM=0.611 ipTM=0.319 tol=1.5 2024-12-07 16:19:34,192 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=69.7 pTM=0.606 ipTM=0.31 tol=1.91 2024-12-07 16:19:44,416 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=69.4 pTM=0.61 ipTM=0.303 tol=2.18 2024-12-07 16:19:54,646 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=69.4 pTM=0.605 ipTM=0.31 tol=2.21 2024-12-07 16:20:04,888 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=69.4 pTM=0.611 ipTM=0.316 tol=1.49 2024-12-07 16:20:15,119 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=69.2 pTM=0.607 ipTM=0.295 tol=1.26 2024-12-07 16:20:25,350 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=69.1 pTM=0.607 ipTM=0.293 tol=1.2 2024-12-07 16:20:35,582 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=69.1 pTM=0.606 ipTM=0.299 tol=1.38 2024-12-07 16:20:45,808 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=69.2 pTM=0.61 ipTM=0.32 tol=0.969 2024-12-07 16:20:56,045 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=69.4 pTM=0.606 ipTM=0.29 tol=1.26 2024-12-07 16:20:56,046 alphafold2_multimer_v3_model_1_seed_000 took 477.8s (30 recycles) 2024-12-07 16:21:06,569 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=68.8 pTM=0.596 ipTM=0.169 2024-12-07 16:21:16,807 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=69.7 pTM=0.599 ipTM=0.169 tol=5.3 2024-12-07 16:21:27,049 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=70.9 pTM=0.598 ipTM=0.158 tol=2.68 2024-12-07 16:21:37,284 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=71.3 pTM=0.595 ipTM=0.168 tol=1.91 2024-12-07 16:21:47,523 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=71.9 pTM=0.597 ipTM=0.155 tol=2.56 2024-12-07 16:21:57,762 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=71.8 pTM=0.597 ipTM=0.152 tol=2.49 2024-12-07 16:22:08,004 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=71.8 pTM=0.599 ipTM=0.166 tol=1.57 2024-12-07 16:22:18,245 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=71.7 pTM=0.598 ipTM=0.163 tol=1.37 2024-12-07 16:22:28,477 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=71.5 pTM=0.598 ipTM=0.164 tol=1.06 2024-12-07 16:22:38,712 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=71.7 pTM=0.599 ipTM=0.183 tol=1.5 2024-12-07 16:22:48,950 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=71.8 pTM=0.598 ipTM=0.171 tol=1.43 2024-12-07 16:22:59,188 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=71.8 pTM=0.598 ipTM=0.171 tol=0.935 2024-12-07 16:23:09,429 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=71.9 pTM=0.598 ipTM=0.176 tol=0.731 2024-12-07 16:23:19,671 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=71.8 pTM=0.597 ipTM=0.172 tol=0.817 2024-12-07 16:23:29,902 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=71.8 pTM=0.599 ipTM=0.169 tol=1.3 2024-12-07 16:23:40,143 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=72.1 pTM=0.6 ipTM=0.174 tol=1.25 2024-12-07 16:23:50,363 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=71.9 pTM=0.598 ipTM=0.177 tol=1.02 2024-12-07 16:24:00,588 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=72.2 pTM=0.599 ipTM=0.19 tol=1.08 2024-12-07 16:24:10,823 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=71.9 pTM=0.598 ipTM=0.181 tol=0.606 2024-12-07 16:24:21,062 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=71.9 pTM=0.599 ipTM=0.175 tol=0.953 2024-12-07 16:24:31,283 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=71.8 pTM=0.599 ipTM=0.186 tol=0.995 2024-12-07 16:24:41,511 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=72.1 pTM=0.598 ipTM=0.179 tol=1.36 2024-12-07 16:24:51,751 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=72.1 pTM=0.599 ipTM=0.183 tol=0.796 2024-12-07 16:25:01,983 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=71.9 pTM=0.598 ipTM=0.179 tol=0.874 2024-12-07 16:25:12,212 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=71.9 pTM=0.598 ipTM=0.182 tol=1.02 2024-12-07 16:25:22,449 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.9 pTM=0.6 ipTM=0.179 tol=0.993 2024-12-07 16:25:32,674 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=72.1 pTM=0.599 ipTM=0.168 tol=0.95 2024-12-07 16:25:42,890 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=71.8 pTM=0.597 ipTM=0.165 tol=0.923 2024-12-07 16:25:53,108 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=72 pTM=0.597 ipTM=0.167 tol=0.846 2024-12-07 16:26:03,333 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=72 pTM=0.596 ipTM=0.164 tol=1.4 2024-12-07 16:26:13,576 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=72.1 pTM=0.599 ipTM=0.167 tol=1.03 2024-12-07 16:26:13,577 alphafold2_multimer_v3_model_2_seed_000 took 317.2s (30 recycles) 2024-12-07 16:26:24,130 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=70.7 pTM=0.612 ipTM=0.195 2024-12-07 16:26:34,392 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=71.4 pTM=0.607 ipTM=0.217 tol=7.02 2024-12-07 16:26:44,646 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=71.8 pTM=0.617 ipTM=0.199 tol=5.04 2024-12-07 16:26:54,903 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=71.8 pTM=0.618 ipTM=0.203 tol=1.91 2024-12-07 16:27:05,170 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=72.1 pTM=0.619 ipTM=0.212 tol=1.82 2024-12-07 16:27:15,431 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=71.9 pTM=0.624 ipTM=0.248 tol=2.11 2024-12-07 16:27:25,687 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=71.8 pTM=0.617 ipTM=0.2 tol=2.07 2024-12-07 16:27:35,938 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=71.8 pTM=0.626 ipTM=0.316 tol=1.62 2024-12-07 16:27:46,196 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=71.8 pTM=0.616 ipTM=0.211 tol=1.72 2024-12-07 16:27:56,446 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=71.9 pTM=0.627 ipTM=0.334 tol=1.59 2024-12-07 16:28:06,688 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.8 pTM=0.614 ipTM=0.208 tol=1.5 2024-12-07 16:28:16,955 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=71.9 pTM=0.62 ipTM=0.227 tol=2.07 2024-12-07 16:28:27,185 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71.7 pTM=0.615 ipTM=0.218 tol=1.64 2024-12-07 16:28:37,421 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=71.7 pTM=0.623 ipTM=0.301 tol=1.41 2024-12-07 16:28:47,670 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=71.8 pTM=0.614 ipTM=0.205 tol=1.6 2024-12-07 16:28:57,908 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=71.8 pTM=0.623 ipTM=0.243 tol=1.44 2024-12-07 16:29:08,156 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=71.7 pTM=0.613 ipTM=0.207 tol=1.55 2024-12-07 16:29:18,406 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=71.9 pTM=0.624 ipTM=0.24 tol=1.67 2024-12-07 16:29:28,646 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=71.7 pTM=0.613 ipTM=0.206 tol=1.52 2024-12-07 16:29:38,888 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=71.6 pTM=0.621 ipTM=0.25 tol=1.72 2024-12-07 16:29:49,139 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=71.6 pTM=0.615 ipTM=0.204 tol=1.43 2024-12-07 16:29:59,373 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=71.9 pTM=0.624 ipTM=0.299 tol=1.45 2024-12-07 16:30:09,638 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=71.9 pTM=0.615 ipTM=0.208 tol=1.36 2024-12-07 16:30:19,877 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=71.9 pTM=0.621 ipTM=0.213 tol=1.45 2024-12-07 16:30:30,131 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=71.7 pTM=0.616 ipTM=0.229 tol=1.32 2024-12-07 16:30:40,386 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=71.9 pTM=0.626 ipTM=0.331 tol=1.21 2024-12-07 16:30:50,641 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=71.8 pTM=0.615 ipTM=0.221 tol=1.44 2024-12-07 16:31:00,885 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=71.6 pTM=0.62 ipTM=0.216 tol=1.33 2024-12-07 16:31:11,150 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=71.6 pTM=0.615 ipTM=0.226 tol=1.21 2024-12-07 16:31:21,398 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=71.6 pTM=0.623 ipTM=0.305 tol=1.41 2024-12-07 16:31:31,655 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=71.8 pTM=0.613 ipTM=0.208 tol=1.58 2024-12-07 16:31:31,656 alphafold2_multimer_v3_model_3_seed_000 took 317.8s (30 recycles) 2024-12-07 16:31:42,176 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=69.4 pTM=0.608 ipTM=0.227 2024-12-07 16:31:52,401 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=71 pTM=0.626 ipTM=0.322 tol=7.7 2024-12-07 16:32:02,639 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=71.2 pTM=0.624 ipTM=0.322 tol=3.42 2024-12-07 16:32:12,878 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=70.9 pTM=0.616 ipTM=0.405 tol=3.3 2024-12-07 16:32:23,106 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70.8 pTM=0.616 ipTM=0.342 tol=4.29 2024-12-07 16:32:33,349 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.4 pTM=0.607 ipTM=0.365 tol=4.82 2024-12-07 16:32:43,604 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=69.8 pTM=0.611 ipTM=0.335 tol=3.99 2024-12-07 16:32:53,832 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=69.9 pTM=0.604 ipTM=0.344 tol=4.41 2024-12-07 16:33:04,079 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=69.6 pTM=0.606 ipTM=0.332 tol=3.81 2024-12-07 16:33:14,324 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=69.9 pTM=0.605 ipTM=0.349 tol=3.67 2024-12-07 16:33:24,566 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=69.6 pTM=0.607 ipTM=0.321 tol=3.98 2024-12-07 16:33:34,814 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=69.6 pTM=0.607 ipTM=0.328 tol=2.06 2024-12-07 16:33:45,065 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=69.4 pTM=0.61 ipTM=0.311 tol=2.96 2024-12-07 16:33:55,311 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=69.6 pTM=0.609 ipTM=0.344 tol=2.16 2024-12-07 16:34:05,555 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=69.7 pTM=0.61 ipTM=0.307 tol=1.74 2024-12-07 16:34:15,806 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=69.2 pTM=0.608 ipTM=0.322 tol=2.22 2024-12-07 16:34:26,052 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=69.4 pTM=0.609 ipTM=0.321 tol=3.41 2024-12-07 16:34:36,314 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=69.6 pTM=0.609 ipTM=0.338 tol=2.07 2024-12-07 16:34:46,553 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=69.6 pTM=0.61 ipTM=0.316 tol=1.81 2024-12-07 16:34:56,809 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=69.4 pTM=0.61 ipTM=0.318 tol=1.97 2024-12-07 16:35:07,045 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=69.8 pTM=0.611 ipTM=0.326 tol=2.55 2024-12-07 16:35:17,302 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=69.4 pTM=0.609 ipTM=0.315 tol=2.69 2024-12-07 16:35:27,551 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=69.8 pTM=0.607 ipTM=0.34 tol=1.58 2024-12-07 16:35:37,808 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=69.4 pTM=0.61 ipTM=0.33 tol=1.36 2024-12-07 16:35:48,044 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=69.7 pTM=0.607 ipTM=0.32 tol=1.28 2024-12-07 16:35:58,293 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=69.3 pTM=0.609 ipTM=0.316 tol=1.37 2024-12-07 16:36:08,535 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=69.7 pTM=0.607 ipTM=0.31 tol=3.78 2024-12-07 16:36:18,795 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=69.6 pTM=0.609 ipTM=0.339 tol=3.01 2024-12-07 16:36:29,051 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=69.9 pTM=0.606 ipTM=0.281 tol=1.7 2024-12-07 16:36:39,294 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=69.4 pTM=0.606 ipTM=0.301 tol=2.04 2024-12-07 16:36:49,550 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=69.8 pTM=0.609 ipTM=0.296 tol=2.21 2024-12-07 16:36:49,550 alphafold2_multimer_v3_model_4_seed_000 took 317.6s (30 recycles) 2024-12-07 16:37:00,130 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=69.6 pTM=0.599 ipTM=0.195 2024-12-07 16:37:10,404 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=70.6 pTM=0.599 ipTM=0.199 tol=6.89 2024-12-07 16:37:20,700 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=71.6 pTM=0.599 ipTM=0.204 tol=5.9 2024-12-07 16:37:30,989 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=71.4 pTM=0.599 ipTM=0.204 tol=6.19 2024-12-07 16:37:41,284 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=71.9 pTM=0.6 ipTM=0.186 tol=5.23 2024-12-07 16:37:51,564 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=72 pTM=0.602 ipTM=0.198 tol=2.02 2024-12-07 16:38:01,855 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=71.9 pTM=0.6 ipTM=0.204 tol=9.16 2024-12-07 16:38:12,124 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=71.7 pTM=0.6 ipTM=0.208 tol=4.28 2024-12-07 16:38:22,409 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=71.6 pTM=0.6 ipTM=0.218 tol=2.15 2024-12-07 16:38:32,683 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=71.8 pTM=0.601 ipTM=0.227 tol=1.29 2024-12-07 16:38:42,948 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=71.9 pTM=0.6 ipTM=0.215 tol=1.29 2024-12-07 16:38:53,247 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=71.8 pTM=0.599 ipTM=0.217 tol=0.916 2024-12-07 16:39:03,526 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=71.6 pTM=0.6 ipTM=0.215 tol=0.778 2024-12-07 16:39:13,807 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=71.6 pTM=0.601 ipTM=0.225 tol=1.14 2024-12-07 16:39:24,110 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=71.6 pTM=0.602 ipTM=0.211 tol=1.2 2024-12-07 16:39:34,384 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=71.3 pTM=0.603 ipTM=0.203 tol=1.14 2024-12-07 16:39:44,653 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=71.8 pTM=0.601 ipTM=0.216 tol=1.01 2024-12-07 16:39:54,936 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=71.8 pTM=0.604 ipTM=0.233 tol=0.844 2024-12-07 16:40:05,204 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=71.8 pTM=0.602 ipTM=0.216 tol=1.02 2024-12-07 16:40:15,491 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=71.4 pTM=0.604 ipTM=0.206 tol=0.861 2024-12-07 16:40:25,770 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=71.6 pTM=0.604 ipTM=0.224 tol=0.838 2024-12-07 16:40:36,034 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=71.5 pTM=0.604 ipTM=0.211 tol=0.762 2024-12-07 16:40:46,321 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=71.8 pTM=0.605 ipTM=0.224 tol=0.858 2024-12-07 16:40:56,601 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=71.5 pTM=0.604 ipTM=0.215 tol=1.13 2024-12-07 16:41:06,870 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=71.6 pTM=0.604 ipTM=0.222 tol=0.845 2024-12-07 16:41:17,151 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=71.5 pTM=0.605 ipTM=0.209 tol=0.912 2024-12-07 16:41:27,429 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=71.6 pTM=0.605 ipTM=0.2 tol=1.04 2024-12-07 16:41:37,695 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=71.3 pTM=0.605 ipTM=0.207 tol=1.44 2024-12-07 16:41:47,974 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=71.8 pTM=0.606 ipTM=0.201 tol=1.62 2024-12-07 16:41:58,255 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=71.5 pTM=0.604 ipTM=0.205 tol=0.994 2024-12-07 16:42:08,523 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=71.4 pTM=0.605 ipTM=0.201 tol=1.22 2024-12-07 16:42:08,524 alphafold2_multimer_v3_model_5_seed_000 took 318.7s (30 recycles) 2024-12-07 16:42:08,840 reranking models by 'multimer' metric 2024-12-07 16:42:10,738 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-07 16:42:58,915 Relaxation took 50.1s 2024-12-07 16:42:58,915 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=69.8 pTM=0.609 ipTM=0.296 2024-12-07 16:43:45,910 Relaxation took 47.0s 2024-12-07 16:43:45,910 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=69.4 pTM=0.606 ipTM=0.29 2024-12-07 16:44:31,125 Relaxation took 45.2s 2024-12-07 16:44:31,125 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=71.8 pTM=0.613 ipTM=0.208 2024-12-07 16:45:51,968 Relaxation took 80.8s 2024-12-07 16:45:51,968 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=71.4 pTM=0.605 ipTM=0.201 2024-12-07 16:46:59,022 Relaxation took 67.1s 2024-12-07 16:46:59,022 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=72.1 pTM=0.599 ipTM=0.167 2024-12-07 16:47:00,652 Done